Search of human proteins with 239742371

Search of human proteins with 239742371

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239742371 PREDICTED: hypothetical protein XP_002342504 [Homo
sapiens]
         (547 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239753874 PREDICTED: similar to hCG2036814 [Homo sapiens]         1100   0.0  
gi|239748437 PREDICTED: similar to hCG2036814 [Homo sapiens]         1100   0.0  
gi|239742371 PREDICTED: hypothetical protein XP_002342504 [Homo ...  1100   0.0  
gi|8922873 GTPase, IMAP family member 4 [Homo sapiens]                 46   1e-04
gi|18594498 GTPase, IMAP family member 1 [Homo sapiens]                41   0.002
gi|28416956 GTPase, IMAP family member 8 [Homo sapiens]                37   0.061
gi|49640011 tetratricopeptide repeat domain 3 [Homo sapiens]           36   0.079
gi|49640009 tetratricopeptide repeat domain 3 [Homo sapiens]           36   0.079
gi|28416949 GTPase, IMAP family member 5 [Homo sapiens]                36   0.10 
gi|56119214 GTPase, IMAP family member 6 [Homo sapiens]                35   0.18 
gi|23397516 GTPase, IMAP family member 7 [Homo sapiens]                33   0.67 
gi|56676335 RAP1 interacting factor 1 [Homo sapiens]                   33   0.88 
gi|28416431 GTPase, IMAP family member 2 [Homo sapiens]                32   2.0  
gi|59710109 hypothetical protein LOC51300 [Homo sapiens]               30   4.4  
gi|45505178 cancer antigen 1 [Homo sapiens]                            30   5.7  
gi|18087809 ATP binding domain 4 isoform 1 [Homo sapiens]              30   5.7  
gi|187282992 hypothetical protein LOC392145 [Homo sapiens]             30   5.7  
gi|24307899 Era-like 1 [Homo sapiens]                                  30   5.7  
gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H...    30   7.4  
gi|55770834 centromere protein F [Homo sapiens]                        30   7.4  
gi|194272176 phospholipase D1 isoform b [Homo sapiens]                 29   9.7  
gi|4505873 phospholipase D1 isoform a [Homo sapiens]                   29   9.7  
gi|208022653 transforming growth factor, beta 2 isoform 1 [Homo ...    29   9.7  
gi|4507463 transforming growth factor, beta 2 isoform 2 [Homo sa...    29   9.7  
gi|4502809 chitotriosidase [Homo sapiens]                              29   9.7  
gi|190610010 hypothetical protein LOC317761 [Homo sapiens]             29   9.7  

>gi|239753874 PREDICTED: similar to hCG2036814 [Homo sapiens]
          Length = 547

 Score = 1100 bits (2846), Expect = 0.0
 Identities = 547/547 (100%), Positives = 547/547 (100%)

Query: 1   MAAVPPSTEVDFSDQDWSSKGELDLQSRNTYLNSVTPVRLLELGSQTYGPSDMAQKCKCR 60
           MAAVPPSTEVDFSDQDWSSKGELDLQSRNTYLNSVTPVRLLELGSQTYGPSDMAQKCKCR
Sbjct: 1   MAAVPPSTEVDFSDQDWSSKGELDLQSRNTYLNSVTPVRLLELGSQTYGPSDMAQKCKCR 60

Query: 61  VSSPEPGSFTLWRDLEENAHFLKASRSQRGEGKVYLGQASVRTLLISSINSKQFVLKLRP 120
           VSSPEPGSFTLWRDLEENAHFLKASRSQRGEGKVYLGQASVRTLLISSINSKQFVLKLRP
Sbjct: 61  VSSPEPGSFTLWRDLEENAHFLKASRSQRGEGKVYLGQASVRTLLISSINSKQFVLKLRP 120

Query: 121 PKALTPGEVLVQTFEIGHLNKNLRKWKKKGIKERMGWDREEKRHKYLHQTSLQETKDISS 180
           PKALTPGEVLVQTFEIGHLNKNLRKWKKKGIKERMGWDREEKRHKYLHQTSLQETKDISS
Sbjct: 121 PKALTPGEVLVQTFEIGHLNKNLRKWKKKGIKERMGWDREEKRHKYLHQTSLQETKDISS 180

Query: 181 LEPCCKKWVVEIREEEPNSSLMKVEAVTLENNTCKDTERNDLVQMSVSQLLLFENGNFQG 240
           LEPCCKKWVVEIREEEPNSSLMKVEAVTLENNTCKDTERNDLVQMSVSQLLLFENGNFQG
Sbjct: 181 LEPCCKKWVVEIREEEPNSSLMKVEAVTLENNTCKDTERNDLVQMSVSQLLLFENGNFQG 240

Query: 241 TSQNFRKKVKVHMKEQLCQGERRLCGESIFKTGKAMTDPNKMIINLALFGMTQSGKSSAG 300
           TSQNFRKKVKVHMKEQLCQGERRLCGESIFKTGKAMTDPNKMIINLALFGMTQSGKSSAG
Sbjct: 241 TSQNFRKKVKVHMKEQLCQGERRLCGESIFKTGKAMTDPNKMIINLALFGMTQSGKSSAG 300

Query: 301 NILLGSTDFHSSFAPCSVTTCCSLGRSCHLHSFMRRGGLEVALQVQVLDTPGYPHSRLSK 360
           NILLGSTDFHSSFAPCSVTTCCSLGRSCHLHSFMRRGGLEVALQVQVLDTPGYPHSRLSK
Sbjct: 301 NILLGSTDFHSSFAPCSVTTCCSLGRSCHLHSFMRRGGLEVALQVQVLDTPGYPHSRLSK 360

Query: 361 KYVKQEVKEALAHHFGQGGLHLALLVQRADVPFCGQEVTDPVQMIQRTCLATNVMTIQQA 420
           KYVKQEVKEALAHHFGQGGLHLALLVQRADVPFCGQEVTDPVQMIQRTCLATNVMTIQQA
Sbjct: 361 KYVKQEVKEALAHHFGQGGLHLALLVQRADVPFCGQEVTDPVQMIQRTCLATNVMTIQQA 420

Query: 421 TLLSNIQLFSGQNRLKDFKLNQPLSSVFGSNSKVQFLSQFKELLGHAWMNYTAILFTHAE 480
           TLLSNIQLFSGQNRLKDFKLNQPLSSVFGSNSKVQFLSQFKELLGHAWMNYTAILFTHAE
Sbjct: 421 TLLSNIQLFSGQNRLKDFKLNQPLSSVFGSNSKVQFLSQFKELLGHAWMNYTAILFTHAE 480

Query: 481 KIEEAGLTEDKYLHEASDTLKTLLNSIQHKYVFQYKKGKSLNEQRMKILERIMEFIKENC 540
           KIEEAGLTEDKYLHEASDTLKTLLNSIQHKYVFQYKKGKSLNEQRMKILERIMEFIKENC
Sbjct: 481 KIEEAGLTEDKYLHEASDTLKTLLNSIQHKYVFQYKKGKSLNEQRMKILERIMEFIKENC 540

Query: 541 YQVLTFK 547
           YQVLTFK
Sbjct: 541 YQVLTFK 547


>gi|239748437 PREDICTED: similar to hCG2036814 [Homo sapiens]
          Length = 547

 Score = 1100 bits (2846), Expect = 0.0
 Identities = 547/547 (100%), Positives = 547/547 (100%)

Query: 1   MAAVPPSTEVDFSDQDWSSKGELDLQSRNTYLNSVTPVRLLELGSQTYGPSDMAQKCKCR 60
           MAAVPPSTEVDFSDQDWSSKGELDLQSRNTYLNSVTPVRLLELGSQTYGPSDMAQKCKCR
Sbjct: 1   MAAVPPSTEVDFSDQDWSSKGELDLQSRNTYLNSVTPVRLLELGSQTYGPSDMAQKCKCR 60

Query: 61  VSSPEPGSFTLWRDLEENAHFLKASRSQRGEGKVYLGQASVRTLLISSINSKQFVLKLRP 120
           VSSPEPGSFTLWRDLEENAHFLKASRSQRGEGKVYLGQASVRTLLISSINSKQFVLKLRP
Sbjct: 61  VSSPEPGSFTLWRDLEENAHFLKASRSQRGEGKVYLGQASVRTLLISSINSKQFVLKLRP 120

Query: 121 PKALTPGEVLVQTFEIGHLNKNLRKWKKKGIKERMGWDREEKRHKYLHQTSLQETKDISS 180
           PKALTPGEVLVQTFEIGHLNKNLRKWKKKGIKERMGWDREEKRHKYLHQTSLQETKDISS
Sbjct: 121 PKALTPGEVLVQTFEIGHLNKNLRKWKKKGIKERMGWDREEKRHKYLHQTSLQETKDISS 180

Query: 181 LEPCCKKWVVEIREEEPNSSLMKVEAVTLENNTCKDTERNDLVQMSVSQLLLFENGNFQG 240
           LEPCCKKWVVEIREEEPNSSLMKVEAVTLENNTCKDTERNDLVQMSVSQLLLFENGNFQG
Sbjct: 181 LEPCCKKWVVEIREEEPNSSLMKVEAVTLENNTCKDTERNDLVQMSVSQLLLFENGNFQG 240

Query: 241 TSQNFRKKVKVHMKEQLCQGERRLCGESIFKTGKAMTDPNKMIINLALFGMTQSGKSSAG 300
           TSQNFRKKVKVHMKEQLCQGERRLCGESIFKTGKAMTDPNKMIINLALFGMTQSGKSSAG
Sbjct: 241 TSQNFRKKVKVHMKEQLCQGERRLCGESIFKTGKAMTDPNKMIINLALFGMTQSGKSSAG 300

Query: 301 NILLGSTDFHSSFAPCSVTTCCSLGRSCHLHSFMRRGGLEVALQVQVLDTPGYPHSRLSK 360
           NILLGSTDFHSSFAPCSVTTCCSLGRSCHLHSFMRRGGLEVALQVQVLDTPGYPHSRLSK
Sbjct: 301 NILLGSTDFHSSFAPCSVTTCCSLGRSCHLHSFMRRGGLEVALQVQVLDTPGYPHSRLSK 360

Query: 361 KYVKQEVKEALAHHFGQGGLHLALLVQRADVPFCGQEVTDPVQMIQRTCLATNVMTIQQA 420
           KYVKQEVKEALAHHFGQGGLHLALLVQRADVPFCGQEVTDPVQMIQRTCLATNVMTIQQA
Sbjct: 361 KYVKQEVKEALAHHFGQGGLHLALLVQRADVPFCGQEVTDPVQMIQRTCLATNVMTIQQA 420

Query: 421 TLLSNIQLFSGQNRLKDFKLNQPLSSVFGSNSKVQFLSQFKELLGHAWMNYTAILFTHAE 480
           TLLSNIQLFSGQNRLKDFKLNQPLSSVFGSNSKVQFLSQFKELLGHAWMNYTAILFTHAE
Sbjct: 421 TLLSNIQLFSGQNRLKDFKLNQPLSSVFGSNSKVQFLSQFKELLGHAWMNYTAILFTHAE 480

Query: 481 KIEEAGLTEDKYLHEASDTLKTLLNSIQHKYVFQYKKGKSLNEQRMKILERIMEFIKENC 540
           KIEEAGLTEDKYLHEASDTLKTLLNSIQHKYVFQYKKGKSLNEQRMKILERIMEFIKENC
Sbjct: 481 KIEEAGLTEDKYLHEASDTLKTLLNSIQHKYVFQYKKGKSLNEQRMKILERIMEFIKENC 540

Query: 541 YQVLTFK 547
           YQVLTFK
Sbjct: 541 YQVLTFK 547


>gi|239742371 PREDICTED: hypothetical protein XP_002342504 [Homo
           sapiens]
          Length = 547

 Score = 1100 bits (2846), Expect = 0.0
 Identities = 547/547 (100%), Positives = 547/547 (100%)

Query: 1   MAAVPPSTEVDFSDQDWSSKGELDLQSRNTYLNSVTPVRLLELGSQTYGPSDMAQKCKCR 60
           MAAVPPSTEVDFSDQDWSSKGELDLQSRNTYLNSVTPVRLLELGSQTYGPSDMAQKCKCR
Sbjct: 1   MAAVPPSTEVDFSDQDWSSKGELDLQSRNTYLNSVTPVRLLELGSQTYGPSDMAQKCKCR 60

Query: 61  VSSPEPGSFTLWRDLEENAHFLKASRSQRGEGKVYLGQASVRTLLISSINSKQFVLKLRP 120
           VSSPEPGSFTLWRDLEENAHFLKASRSQRGEGKVYLGQASVRTLLISSINSKQFVLKLRP
Sbjct: 61  VSSPEPGSFTLWRDLEENAHFLKASRSQRGEGKVYLGQASVRTLLISSINSKQFVLKLRP 120

Query: 121 PKALTPGEVLVQTFEIGHLNKNLRKWKKKGIKERMGWDREEKRHKYLHQTSLQETKDISS 180
           PKALTPGEVLVQTFEIGHLNKNLRKWKKKGIKERMGWDREEKRHKYLHQTSLQETKDISS
Sbjct: 121 PKALTPGEVLVQTFEIGHLNKNLRKWKKKGIKERMGWDREEKRHKYLHQTSLQETKDISS 180

Query: 181 LEPCCKKWVVEIREEEPNSSLMKVEAVTLENNTCKDTERNDLVQMSVSQLLLFENGNFQG 240
           LEPCCKKWVVEIREEEPNSSLMKVEAVTLENNTCKDTERNDLVQMSVSQLLLFENGNFQG
Sbjct: 181 LEPCCKKWVVEIREEEPNSSLMKVEAVTLENNTCKDTERNDLVQMSVSQLLLFENGNFQG 240

Query: 241 TSQNFRKKVKVHMKEQLCQGERRLCGESIFKTGKAMTDPNKMIINLALFGMTQSGKSSAG 300
           TSQNFRKKVKVHMKEQLCQGERRLCGESIFKTGKAMTDPNKMIINLALFGMTQSGKSSAG
Sbjct: 241 TSQNFRKKVKVHMKEQLCQGERRLCGESIFKTGKAMTDPNKMIINLALFGMTQSGKSSAG 300

Query: 301 NILLGSTDFHSSFAPCSVTTCCSLGRSCHLHSFMRRGGLEVALQVQVLDTPGYPHSRLSK 360
           NILLGSTDFHSSFAPCSVTTCCSLGRSCHLHSFMRRGGLEVALQVQVLDTPGYPHSRLSK
Sbjct: 301 NILLGSTDFHSSFAPCSVTTCCSLGRSCHLHSFMRRGGLEVALQVQVLDTPGYPHSRLSK 360

Query: 361 KYVKQEVKEALAHHFGQGGLHLALLVQRADVPFCGQEVTDPVQMIQRTCLATNVMTIQQA 420
           KYVKQEVKEALAHHFGQGGLHLALLVQRADVPFCGQEVTDPVQMIQRTCLATNVMTIQQA
Sbjct: 361 KYVKQEVKEALAHHFGQGGLHLALLVQRADVPFCGQEVTDPVQMIQRTCLATNVMTIQQA 420

Query: 421 TLLSNIQLFSGQNRLKDFKLNQPLSSVFGSNSKVQFLSQFKELLGHAWMNYTAILFTHAE 480
           TLLSNIQLFSGQNRLKDFKLNQPLSSVFGSNSKVQFLSQFKELLGHAWMNYTAILFTHAE
Sbjct: 421 TLLSNIQLFSGQNRLKDFKLNQPLSSVFGSNSKVQFLSQFKELLGHAWMNYTAILFTHAE 480

Query: 481 KIEEAGLTEDKYLHEASDTLKTLLNSIQHKYVFQYKKGKSLNEQRMKILERIMEFIKENC 540
           KIEEAGLTEDKYLHEASDTLKTLLNSIQHKYVFQYKKGKSLNEQRMKILERIMEFIKENC
Sbjct: 481 KIEEAGLTEDKYLHEASDTLKTLLNSIQHKYVFQYKKGKSLNEQRMKILERIMEFIKENC 540

Query: 541 YQVLTFK 547
           YQVLTFK
Sbjct: 541 YQVLTFK 547


>gi|8922873 GTPase, IMAP family member 4 [Homo sapiens]
          Length = 329

 Score = 45.8 bits (107), Expect = 1e-04
 Identities = 53/274 (19%), Positives = 98/274 (35%), Gaps = 77/274 (28%)

Query: 273 GKAMTDPNKMIINLALFGMTQSGKSSAGNILLGSTDFHSSFAPCSVTTCCSLGRSCHLHS 332
           G    +P    + + L G T +GKS+ GN +LG   FHS  A  S+T  C          
Sbjct: 20  GPGRQEPRNSQLRIVLVGKTGAGKSATGNSILGRKVFHSGTAAKSITKKCE--------- 70

Query: 333 FMRRGGLEVALQVQVLDTPGYPHSRLSKKYVKQEVKEALAHHFGQGGLHLALLVQRADVP 392
             +R       ++ V+DTPG   + +      +E+   +       G H  LLV    VP
Sbjct: 71  --KRSSSWKETELVVVDTPGIFDTEVPNAETSKEIIRCIL--LTSPGPHALLLV----VP 122

Query: 393 FCGQEVTDPVQMIQRTCLATNVMTIQQATLLSNIQLFSGQNRLKDFKLNQPLSSVFGSNS 452
                                                 G+   ++ K  + +  +FG  +
Sbjct: 123 L-------------------------------------GRYTEEEHKATEKILKMFGERA 145

Query: 453 KVQFLSQFKELLGHAWMNYTAILFTHAEKIEEAGLTEDKYLHEASDTLKTLLNSIQHKYV 512
           +                ++  ++FT  + + +  L +  YL EA + ++ L++    +Y 
Sbjct: 146 R----------------SFMILIFTRKDDLGDTNLHD--YLREAPEDIQDLMDIFGDRYC 187

Query: 513 FQYKKGKSLNE-----QRMKILERIMEFIKENCY 541
               K     +     Q + +++R++   KE CY
Sbjct: 188 ALNNKATGAEQEAQRAQLLGLIQRVVRENKEGCY 221


>gi|18594498 GTPase, IMAP family member 1 [Homo sapiens]
          Length = 306

 Score = 41.2 bits (95), Expect = 0.002
 Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 19/79 (24%)

Query: 286 LALFGMTQSGKSSAGNILLGSTDFHSSFAPCSVTTCCSLGR----SCHLHSFMRRGGLEV 341
           L L G T +GKS+ GN +LG   F S     SVT  C+ G      CH            
Sbjct: 30  LILVGRTGAGKSATGNSILGQRRFFSRLGATSVTRACTTGSRRWDKCH------------ 77

Query: 342 ALQVQVLDTPGYPHSRLSK 360
              V+V+DTP    S++SK
Sbjct: 78  ---VEVVDTPDIFSSQVSK 93


>gi|28416956 GTPase, IMAP family member 8 [Homo sapiens]
          Length = 665

 Score = 36.6 bits (83), Expect = 0.061
 Identities = 43/168 (25%), Positives = 65/168 (38%), Gaps = 24/168 (14%)

Query: 217 TERNDLVQMSVSQLLLFENGNFQGTSQNFRKKVKVHMKEQLCQGERRLCGESIFKTGKAM 276
           T + DL    +   L   N    G  Q  + +          + E+R   E + K  ++M
Sbjct: 364 TRKEDLGDQDLDTFLRNSNKALYGLIQKCKNRYSAFNYRATGEEEQRQADELLEKI-ESM 422

Query: 277 TDPN---------KMIINLALFGMTQSGKSSAGNILLGSTDFHSSFAPCSVTTCCSLGRS 327
              N         K  +N+ L G + +GKS+ GN +LGS  F S      VT     GR 
Sbjct: 423 VHQNGNKHCVFREKETLNIVLVGRSGTGKSATGNSILGSLVFTSRLRAQPVTKTSQSGRR 482

Query: 328 CHLHSFMRRGGLEVALQVQVLDTPGYPHSRLSKK---YVKQEVKEALA 372
                     G EV     V+DTP +      +K    +++EVK  L+
Sbjct: 483 TW-------DGQEVV----VVDTPSFNQMLDVEKDPSRLEEEVKRCLS 519



 Score = 35.0 bits (79), Expect = 0.18
 Identities = 30/103 (29%), Positives = 46/103 (44%), Gaps = 13/103 (12%)

Query: 284 INLALFGMTQSGKSSAGNILLGSTDFHSSFAPCSVTTCCSLGRSCHLHSFMRRGGLEVAL 343
           + L L G  +SGKS+ GN +LG   F S F+  +V       + C   S++ R       
Sbjct: 11  LRLLLLGKCRSGKSATGNAILGKHVFKSKFSDQTVI------KMCQRESWVLR-----ER 59

Query: 344 QVQVLDTPGYPHSRLSKKYVKQEVKEALAHHFGQGGLHLALLV 386
           +V V+DTP    S    +  ++ ++  L        LH  LLV
Sbjct: 60  KVVVIDTPDLFSSIACAEDKQRNIQHCL--ELSAPSLHALLLV 100



 Score = 33.1 bits (74), Expect = 0.67
 Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 20/109 (18%)

Query: 278 DPNKMIINLALFGMTQSGKSSAGNILLGSTDFHSSFAPCSVTTCCSLGRSCHLHSFMRRG 337
           +P    + + L G   +GKS+AGN +LG   F + F+  SVT            SF+   
Sbjct: 242 NPGTSELTVLLVGKRGAGKSAAGNSILGRQAFQTGFSEQSVT-----------QSFLSES 290

Query: 338 GLEVALQVQVLDTPGYPHSRLSKKYVKQEVKEALAHHFGQGGLHLALLV 386
                 +V ++D P       S K +  EV++ +       G H  LLV
Sbjct: 291 RSWRKKKVSIIDAPDIS----SLKNIDSEVRKHIC-----TGPHAFLLV 330


>gi|49640011 tetratricopeptide repeat domain 3 [Homo sapiens]
          Length = 2025

 Score = 36.2 bits (82), Expect = 0.079
 Identities = 29/124 (23%), Positives = 61/124 (49%), Gaps = 6/124 (4%)

Query: 135  EIGHLNKNLRKWKKKGIKERMGWDREEKRHKYLHQTSLQETK---DISSLEPCCKKWVVE 191
            ++  + +N  + K KG++E    D EEK  ++L +  + +T+    +  LE   KKW  E
Sbjct: 1505 QLQEVYENYEQIKLKGLEETR--DLEEKLKRHLEENKISKTELDWFLQDLEREIKKWQQE 1562

Query: 192  IREEEPNSSLMKVEAVTLENNTCKDTERNDLVQMSVSQLLLFENGNFQGTSQNFRKKVKV 251
             +E +     +K +   + N +   T++ND  +    +L L ++     T  N + K++ 
Sbjct: 1563 KKEIQERLKSLKKKIKKVSNASEMYTQKNDGKEKE-HELHLDQSLEISNTLTNEKMKIEE 1621

Query: 252  HMKE 255
            ++K+
Sbjct: 1622 YIKK 1625


>gi|49640009 tetratricopeptide repeat domain 3 [Homo sapiens]
          Length = 2025

 Score = 36.2 bits (82), Expect = 0.079
 Identities = 29/124 (23%), Positives = 61/124 (49%), Gaps = 6/124 (4%)

Query: 135  EIGHLNKNLRKWKKKGIKERMGWDREEKRHKYLHQTSLQETK---DISSLEPCCKKWVVE 191
            ++  + +N  + K KG++E    D EEK  ++L +  + +T+    +  LE   KKW  E
Sbjct: 1505 QLQEVYENYEQIKLKGLEETR--DLEEKLKRHLEENKISKTELDWFLQDLEREIKKWQQE 1562

Query: 192  IREEEPNSSLMKVEAVTLENNTCKDTERNDLVQMSVSQLLLFENGNFQGTSQNFRKKVKV 251
             +E +     +K +   + N +   T++ND  +    +L L ++     T  N + K++ 
Sbjct: 1563 KKEIQERLKSLKKKIKKVSNASEMYTQKNDGKEKE-HELHLDQSLEISNTLTNEKMKIEE 1621

Query: 252  HMKE 255
            ++K+
Sbjct: 1622 YIKK 1625


>gi|28416949 GTPase, IMAP family member 5 [Homo sapiens]
          Length = 307

 Score = 35.8 bits (81), Expect = 0.10
 Identities = 55/248 (22%), Positives = 88/248 (35%), Gaps = 74/248 (29%)

Query: 284 INLALFGMTQSGKSSAGNILLGSTDFHSSFAPCSVTTCCSLGRSCHLHSFMRRGGLEVAL 343
           + + L G T  GKS+ GN +LG   F S     SVT  C +           + G     
Sbjct: 28  LRIILVGKTGCGKSATGNSILGQPVFESKLRAQSVTRTCQV-----------KTGTWNGR 76

Query: 344 QVQVLDTPGYPHSRLSKKYVKQEVKEALAHHFGQGGLHLALLVQRADVPFCGQEVTDPVQ 403
           +V V+DTP    S+   + + + + +   +     G H+ LLV                 
Sbjct: 77  KVLVVDTPSIFESQADTQELYKNIGD--CYLLSAPGPHVLLLV----------------- 117

Query: 404 MIQRTCLATNVMTIQQATLLSNIQLFSGQNRLKDFKLNQPLSSVFGSNSKVQFLSQFKEL 463
                                 IQL  G+   +D    + +  VFG+ +           
Sbjct: 118 ----------------------IQL--GRFTAQDTVAIRKVKEVFGTGA----------- 142

Query: 464 LGHAWMNYTAILFTHAEKIEEAGLTEDKYLHEASD-TLKTLLNSIQHKYVFQYKKGKSLN 522
                M +  ILFTH E +   G   D Y+    + +LK L+   + +Y   +    S+ 
Sbjct: 143 -----MRHVVILFTHKEDL--GGQALDDYVANTDNCSLKDLVRECERRYC-AFNNWGSVE 194

Query: 523 EQRMKILE 530
           EQR +  E
Sbjct: 195 EQRQQQAE 202


>gi|56119214 GTPase, IMAP family member 6 [Homo sapiens]
          Length = 292

 Score = 35.0 bits (79), Expect = 0.18
 Identities = 32/105 (30%), Positives = 44/105 (41%), Gaps = 18/105 (17%)

Query: 284 INLALFGMTQSGKSSAGNILLGSTDFHSSFAPCSVTTCCSLGRSCHLHSFMRRGGLEVAL 343
           + L L G T SGKS+ GN +LG   F S  +   VT            +  RR       
Sbjct: 41  LRLILMGKTGSGKSATGNSILGRDVFESKLSTRPVT-----------KTSQRRSREWAGK 89

Query: 344 QVQVLDTPGYPHSRLSKKYVKQEVKEAL--AHHFGQGGLHLALLV 386
           +++V+DTP      +    V  EV +A+  A      G H  LLV
Sbjct: 90  ELEVIDTP-----NILSPQVSPEVADAICQAIVLSAPGPHAVLLV 129


>gi|23397516 GTPase, IMAP family member 7 [Homo sapiens]
          Length = 300

 Score = 33.1 bits (74), Expect = 0.67
 Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 12/114 (10%)

Query: 276 MTDPNKMIINLALFGMTQSGKSSAGNILLGSTDFHSSFAPCSVTTCCSLGRSCHLHSFMR 335
           M +     + + L G T SGKS+  N +LG   F S  A  +VT      ++C   S   
Sbjct: 1   MAESEDRSLRIVLVGKTGSGKSATANTILGEEIFDSRIAAQAVT------KNCQKASREW 54

Query: 336 RGGLEVALQVQVLDTPGYPHSRLSKKYVKQEVKEALAHHF-GQGGLHLALLVQR 388
           +G       + V+DTPG   ++ S     +E+   +     G   + L LL+ R
Sbjct: 55  QG-----RDLLVVDTPGLFDTKESLDTTCKEISRCIISSCPGPHAIVLVLLLGR 103


>gi|56676335 RAP1 interacting factor 1 [Homo sapiens]
          Length = 2472

 Score = 32.7 bits (73), Expect = 0.88
 Identities = 35/144 (24%), Positives = 59/144 (40%), Gaps = 30/144 (20%)

Query: 190  VEIREEEPNSSL---MKVEAVTLENNTCKDTERNDLVQMSVSQLLLFENGNFQGTSQNFR 246
            +E +EE+P  +    + +E VT+E N CK TE N L +    +L +    +F G     +
Sbjct: 1877 LETKEEKPEETPKMELSLENVTVEGNACKVTESN-LEKAKTMELNVGNEASFHG-----Q 1930

Query: 247  KKVKVHMKEQLCQGERRLCGESIFKTGKA------------------MTDPNKMIINLAL 288
            ++ K  + E+    E +   +S   T K                    T P K+     +
Sbjct: 1931 ERTKTGISEEAAIEENKRNDDSEADTAKLNAKEVATEEFNSDISLSDNTTPVKLNAQTEI 1990

Query: 289  FGMTQSGKSSAGNILLGSTDFHSS 312
               T +G+   GN +   +D HSS
Sbjct: 1991 SEQTAAGELDGGNDV---SDLHSS 2011


>gi|28416431 GTPase, IMAP family member 2 [Homo sapiens]
          Length = 337

 Score = 31.6 bits (70), Expect = 2.0
 Identities = 15/40 (37%), Positives = 22/40 (55%)

Query: 284 INLALFGMTQSGKSSAGNILLGSTDFHSSFAPCSVTTCCS 323
           + + L G T +GKS+AGN +L    F S     ++T  CS
Sbjct: 23  LRIILVGKTGTGKSAAGNSILRKQAFESKLGSQTLTKTCS 62



 Score = 30.8 bits (68), Expect = 3.3
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 455 QFLSQFKELLGHAWMNYTAILFTHAEKIEEAGLTEDKYLHEASD 498
           Q   + KE+ G   M +T +LFTH E +    L +  Y+H++ +
Sbjct: 124 QAAQRVKEIFGEDAMGHTIVLFTHKEDLNGGSLMD--YMHDSDN 165


>gi|59710109 hypothetical protein LOC51300 [Homo sapiens]
          Length = 285

 Score = 30.4 bits (67), Expect = 4.4
 Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 6/73 (8%)

Query: 136 IGHLNKNLRKWKKKGIKERMGWDREEKRHKYLHQTSLQETKD-ISSLEPCCKKWVVEIRE 194
           +G L    +K+  + ++ER     ++K  K LH+  L+E K  +   E   +K    ++E
Sbjct: 202 VGGLLMAFQKYSGETVQER-----KQKDRKALHELKLEEWKGRLQVTEHLPEKIESSLQE 256

Query: 195 EEPNSSLMKVEAV 207
           +EP +   K+EA+
Sbjct: 257 DEPENDAKKIEAL 269


>gi|45505178 cancer antigen 1 [Homo sapiens]
          Length = 641

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 19/70 (27%), Positives = 34/70 (48%)

Query: 421 TLLSNIQLFSGQNRLKDFKLNQPLSSVFGSNSKVQFLSQFKELLGHAWMNYTAILFTHAE 480
           T + N+Q  S   R K+ KL Q ++ V   N+K++      E   +     TA L    E
Sbjct: 378 TQVRNLQFMSENERTKNIKLQQQINEVKNENAKLKQQVARSEEQNYVPKFETAQLKDQLE 437

Query: 481 KIEEAGLTED 490
           ++ ++ +T+D
Sbjct: 438 EVLKSDITKD 447


>gi|18087809 ATP binding domain 4 isoform 1 [Homo sapiens]
          Length = 267

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 12/117 (10%)

Query: 395 GQEVTDPVQMIQRTCLATNVMTIQQATLLSNIQLFSGQNRLKDFKLNQPLSSVFGSNSKV 454
           G EV D  ++++       V  I    +LS+ Q    +N  K   L QPL+ ++  N + 
Sbjct: 90  GDEVEDLYELLKLVKEKEEVEGISVGAILSDYQRIRVENVCKRLNL-QPLAYLWQRNQE- 147

Query: 455 QFLSQFKELLGHAWMNYTAILFTHAEKIEEAGLTEDKYLHEASDTLKTLLNSIQHKY 511
                 +E++     N  A++     K+   GL  DK+L +  D ++  L  +  KY
Sbjct: 148 ---DLLREMISS---NIQAMII----KVAALGLDPDKHLGKTLDQMEPYLIELSKKY 194


>gi|187282992 hypothetical protein LOC392145 [Homo sapiens]
          Length = 174

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 11/81 (13%)

Query: 174 ETKDISSLEPCCKKWVV-EIRE------EEPNSSLMKVEAVTLENNTCKDTERNDLVQMS 226
           ET  +SS+ P  K+ ++ + R       EEP  +++  EA  LE   C D  R   VQ+ 
Sbjct: 32  ETNRLSSMPPTLKRGLLCDFRHAPTGGGEEPEPAMVLQEA--LEPAMCLD--RYPHVQLE 87

Query: 227 VSQLLLFENGNFQGTSQNFRK 247
            S+LLL + G+   T  N  K
Sbjct: 88  ASELLLEDGGSALATELNTAK 108


>gi|24307899 Era-like 1 [Homo sapiens]
          Length = 437

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 24/73 (32%), Positives = 31/73 (42%), Gaps = 12/73 (16%)

Query: 280 NKMIINLALFGMTQSGKSSAGNILLGSTDFHSSFAPCSVTTCCSLGRSCHLHSFMRRGGL 339
           N  ++ + L G   +GKS+  N LLG   F  S      T C +LG              
Sbjct: 110 NSRVLRVVLLGAPNAGKSTLSNQLLGRKVFPVS-RKVHTTRCQALGVI-----------T 157

Query: 340 EVALQVQVLDTPG 352
           E   QV +LDTPG
Sbjct: 158 EKETQVILLDTPG 170


>gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo
            sapiens]
          Length = 1940

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 13/119 (10%)

Query: 123  ALTPGEVLVQTFE--IGHLNKNLRKWKKKGIKERMGWDREEKRHKYLHQTSLQETKDISS 180
            AL  G+  +Q  E  I  L   L   +KK  +   G  + E+R K L   S ++ K++  
Sbjct: 1805 ALKGGKKQIQKLETRIRELEFELEGEQKKNTESVKGLRKYERRVKELTYQSEEDRKNVLR 1864

Query: 181  LEPCCKKWVVEIR---------EEEPNSSLMKVEAVTLENNTCKDTERNDLVQMSVSQL 230
            L+    K  V+++         +E+ N+ L K      E    +  ER D+ +  V++L
Sbjct: 1865 LQDLVDKLQVKVKSYKRQAEEADEQANAHLTKFRKAQHELEEAE--ERADIAESQVNKL 1921


>gi|55770834 centromere protein F [Homo sapiens]
          Length = 3114

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 3/96 (3%)

Query: 134 FEIGHLNKNLRKWKKKGIKERMGWDREEKRHKYLHQT--SLQETKDISSLEPCCKKWVVE 191
           F++  L   L+K K+K   E+      ++ ++ L +   SL++TK   S E   K+  V 
Sbjct: 39  FQLDSLEAALQKQKQKVENEKTEGTNLKRENQRLMEICESLEKTKQKISHELQVKESQVN 98

Query: 192 IREEEPNSSLMKVEAVTLENNTCK-DTERNDLVQMS 226
            +E + NS   ++E +  E   CK + ER+     S
Sbjct: 99  FQEGQLNSGKKQIEKLEQELKRCKSELERSQQAAQS 134


>gi|194272176 phospholipase D1 isoform b [Homo sapiens]
          Length = 1036

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 6/48 (12%)

Query: 449 GSNSKVQFLSQFKELLGHAWMNYTAI--LFTHAEKIEEAGLTEDKYLH 494
           G NS    L Q K  LG+ W+NY +   L THAE +E   +TE  Y+H
Sbjct: 815 GENS---ILGQLKAELGNQWINYISFCGLRTHAE-LEGNLVTELIYVH 858


>gi|4505873 phospholipase D1 isoform a [Homo sapiens]
          Length = 1074

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 6/48 (12%)

Query: 449 GSNSKVQFLSQFKELLGHAWMNYTAI--LFTHAEKIEEAGLTEDKYLH 494
           G NS    L Q K  LG+ W+NY +   L THAE +E   +TE  Y+H
Sbjct: 853 GENS---ILGQLKAELGNQWINYISFCGLRTHAE-LEGNLVTELIYVH 896


>gi|208022653 transforming growth factor, beta 2 isoform 1 [Homo
           sapiens]
          Length = 442

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 31/154 (20%), Positives = 63/154 (40%), Gaps = 23/154 (14%)

Query: 115 VLKLRPPKALTPGEVLVQTFEI-----------GHLNKNLRKWKKKGIKERMGWDREEKR 163
           V +L+ PKA  P E  ++ ++I            +++  + K + +G  E + +D  +  
Sbjct: 179 VFRLQNPKARVP-EQRIELYQILKSKDLTSPTQRYIDSKVVKTRAEG--EWLSFDVTDAV 235

Query: 164 HKYLHQTSLQETKDISSLEPCC-----KKWVVEIREEEPNSSLMKVEAVTL----ENNTC 214
           H++LH         IS   PCC       +++  + EE  +    ++  +     +  T 
Sbjct: 236 HEWLHHKDRNLGFKISLHCPCCTFVPSNNYIIPNKSEELEARFAGIDGTSTYTSGDQKTI 295

Query: 215 KDTERNDLVQMSVSQLLLFENGNFQGTSQNFRKK 248
           K T + +  +     L+L  +   +    N RKK
Sbjct: 296 KSTRKKNSGKTPHLLLMLLPSYRLESQQTNRRKK 329


>gi|4507463 transforming growth factor, beta 2 isoform 2 [Homo
           sapiens]
          Length = 414

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 31/154 (20%), Positives = 63/154 (40%), Gaps = 23/154 (14%)

Query: 115 VLKLRPPKALTPGEVLVQTFEI-----------GHLNKNLRKWKKKGIKERMGWDREEKR 163
           V +L+ PKA  P E  ++ ++I            +++  + K + +G  E + +D  +  
Sbjct: 151 VFRLQNPKARVP-EQRIELYQILKSKDLTSPTQRYIDSKVVKTRAEG--EWLSFDVTDAV 207

Query: 164 HKYLHQTSLQETKDISSLEPCC-----KKWVVEIREEEPNSSLMKVEAVTL----ENNTC 214
           H++LH         IS   PCC       +++  + EE  +    ++  +     +  T 
Sbjct: 208 HEWLHHKDRNLGFKISLHCPCCTFVPSNNYIIPNKSEELEARFAGIDGTSTYTSGDQKTI 267

Query: 215 KDTERNDLVQMSVSQLLLFENGNFQGTSQNFRKK 248
           K T + +  +     L+L  +   +    N RKK
Sbjct: 268 KSTRKKNSGKTPHLLLMLLPSYRLESQQTNRRKK 301


>gi|4502809 chitotriosidase [Homo sapiens]
          Length = 466

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 23/65 (35%), Positives = 26/65 (40%), Gaps = 15/65 (23%)

Query: 7   STEVDFSDQDWSSKGELDLQSRNTYLNSVTPVRLLELGSQTYGPS-DMAQKCKCRVSSPE 65
           S  VD + Q W  KG              TP   L LG  TYG S  +A     RV +P 
Sbjct: 240 SLNVDAAVQQWLQKG--------------TPASKLILGMPTYGRSFTLASSSDTRVGAPA 285

Query: 66  PGSFT 70
            GS T
Sbjct: 286 TGSGT 290


>gi|190610010 hypothetical protein LOC317761 [Homo sapiens]
          Length = 587

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 14/43 (32%), Positives = 27/43 (62%)

Query: 497 SDTLKTLLNSIQHKYVFQYKKGKSLNEQRMKILERIMEFIKEN 539
           +D+L   L+ +  ++VFQY++  S  E+ ++ + +  E IKEN
Sbjct: 2   NDSLFVSLDRLLLEFVFQYEQDISTKEEMIQRINKCCEDIKEN 44


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.132    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,193,584
Number of Sequences: 37866
Number of extensions: 853524
Number of successful extensions: 2354
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 2328
Number of HSP's gapped (non-prelim): 35
length of query: 547
length of database: 18,247,518
effective HSP length: 107
effective length of query: 440
effective length of database: 14,195,856
effective search space: 6246176640
effective search space used: 6246176640
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.