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Search of human proteins with 239742245
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239742245 PREDICTED: hypothetical protein XP_002342464 [Homo
sapiens]
(424 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239742245 PREDICTED: hypothetical protein XP_002342464 [Homo ... 874 0.0
gi|239753797 PREDICTED: hypothetical protein [Homo sapiens] 485 e-137
gi|239748346 PREDICTED: hypothetical protein XP_002346641 [Homo ... 432 e-121
gi|18079216 CASK interacting protein 1 [Homo sapiens] 44 2e-04
gi|116292168 KRAB A domain containing 1 [Homo sapiens] 44 2e-04
gi|42475970 synapse defective 1, Rho GTPase, homolog 1 [Homo sap... 44 3e-04
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 43 5e-04
gi|239741486 PREDICTED: hypothetical protein XP_002342213 [Homo ... 42 0.001
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 42 0.001
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 42 0.001
gi|95147555 microtubule-associated protein 1A [Homo sapiens] 41 0.002
gi|217416343 fibrosin-like 1 [Homo sapiens] 39 0.007
gi|194578898 hypothetical protein LOC100170841 [Homo sapiens] 39 0.007
gi|24797153 faciogenital dysplasia protein [Homo sapiens] 39 0.009
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 39 0.012
gi|146134388 YLP motif containing 1 [Homo sapiens] 39 0.012
gi|55741677 SET domain containing 1A [Homo sapiens] 38 0.015
gi|239753975 PREDICTED: hypothetical protein [Homo sapiens] 38 0.020
gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f... 38 0.020
gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e... 38 0.020
gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d... 38 0.020
gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b ... 38 0.020
gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a ... 38 0.020
gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c ... 38 0.020
gi|50345997 E1A binding protein p300 [Homo sapiens] 37 0.026
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa... 37 0.026
gi|19924099 synapsin I isoform Ia [Homo sapiens] 37 0.026
gi|19924097 synapsin I isoform Ib [Homo sapiens] 37 0.026
gi|148236531 hypothetical protein LOC339779 [Homo sapiens] 37 0.026
gi|226437579 NAC alpha domain containing [Homo sapiens] 37 0.034
>gi|239742245 PREDICTED: hypothetical protein XP_002342464 [Homo
sapiens]
Length = 424
Score = 874 bits (2257), Expect = 0.0
Identities = 424/424 (100%), Positives = 424/424 (100%)
Query: 1 MGAALLAALSSILSHLPAVRTQLGGGAFHNEGPEFRGCVLSPPFPKPRHWLSCTCGGEHE 60
MGAALLAALSSILSHLPAVRTQLGGGAFHNEGPEFRGCVLSPPFPKPRHWLSCTCGGEHE
Sbjct: 1 MGAALLAALSSILSHLPAVRTQLGGGAFHNEGPEFRGCVLSPPFPKPRHWLSCTCGGEHE 60
Query: 61 NKELPLHQSTGRLLSCLPTRRGHSRSALQKNRLHCPTEGPTNQTPYIKGTEGNGPGLGPQ 120
NKELPLHQSTGRLLSCLPTRRGHSRSALQKNRLHCPTEGPTNQTPYIKGTEGNGPGLGPQ
Sbjct: 61 NKELPLHQSTGRLLSCLPTRRGHSRSALQKNRLHCPTEGPTNQTPYIKGTEGNGPGLGPQ 120
Query: 121 EEPPAPLTSQPERSSSQRARGKTPSSPTLSPSRGSPLLLREPSLVTDSLEAHRPCPCPPQ 180
EEPPAPLTSQPERSSSQRARGKTPSSPTLSPSRGSPLLLREPSLVTDSLEAHRPCPCPPQ
Sbjct: 121 EEPPAPLTSQPERSSSQRARGKTPSSPTLSPSRGSPLLLREPSLVTDSLEAHRPCPCPPQ 180
Query: 181 PNQLAPQLSSAPAQLVWAETHSLALPRPNGPESLTWVIFRKSKDGRVHLASSSRLRLRRL 240
PNQLAPQLSSAPAQLVWAETHSLALPRPNGPESLTWVIFRKSKDGRVHLASSSRLRLRRL
Sbjct: 181 PNQLAPQLSSAPAQLVWAETHSLALPRPNGPESLTWVIFRKSKDGRVHLASSSRLRLRRL 240
Query: 241 LFPLSTQGCERHRSSPRRPPSAGVDVGLLLAQGRGVPAPASRSCERDGRRLVEGKQDSAE 300
LFPLSTQGCERHRSSPRRPPSAGVDVGLLLAQGRGVPAPASRSCERDGRRLVEGKQDSAE
Sbjct: 241 LFPLSTQGCERHRSSPRRPPSAGVDVGLLLAQGRGVPAPASRSCERDGRRLVEGKQDSAE 300
Query: 301 HQSGPEPALPSLLSTKPPLAEDGRGVAGEVGPVDHTALLGRTAPGLPCRVALPPLSHRLL 360
HQSGPEPALPSLLSTKPPLAEDGRGVAGEVGPVDHTALLGRTAPGLPCRVALPPLSHRLL
Sbjct: 301 HQSGPEPALPSLLSTKPPLAEDGRGVAGEVGPVDHTALLGRTAPGLPCRVALPPLSHRLL 360
Query: 361 ETGVQTLELPGRQGDRQRTSSSGSDKDRQCRLVGGAVDEPVLSLGSTVLAAPRPAPGRGD 420
ETGVQTLELPGRQGDRQRTSSSGSDKDRQCRLVGGAVDEPVLSLGSTVLAAPRPAPGRGD
Sbjct: 361 ETGVQTLELPGRQGDRQRTSSSGSDKDRQCRLVGGAVDEPVLSLGSTVLAAPRPAPGRGD 420
Query: 421 CGCH 424
CGCH
Sbjct: 421 CGCH 424
>gi|239753797 PREDICTED: hypothetical protein [Homo sapiens]
Length = 864
Score = 485 bits (1248), Expect = e-137
Identities = 293/455 (64%), Positives = 303/455 (66%), Gaps = 88/455 (19%)
Query: 42 PPFPKPRHWLSCTCGGEHENKELPLHQSTGRLLSCLPTRRGHSRSALQKNRLHCPTEGP- 100
PP P GG H +L TG LL C P G ++A PT
Sbjct: 426 PPAPLTSQPERAGAGGSHGPDQL-----TGNLL-CAP---GQVQAAAM-----APTSSQE 471
Query: 101 TNQTPYIKGTEGNGPGLGPQE--------------EPPAPLTSQPE------RSSSQRAR 140
T P+ G G G GP + AP +SQ RSSSQRAR
Sbjct: 472 TYSVPW--GRAGAGGSRGPDQLTGNLLCAPGQVPAAAVAPTSSQETYSVPQGRSSSQRAR 529
Query: 141 GKTPSSPTLSPSRGSPLLLREPSLVTDSLEA-------HRPCP-----------CPPQPN 182
GKTPSSPTLSPSRGSPLLLREPSLVTDSLEA H C C +
Sbjct: 530 GKTPSSPTLSPSRGSPLLLREPSLVTDSLEAHRVNTVAHADCTTHARDAGLELGCAYRVR 589
Query: 183 QLAPQLS----SAPAQLVWAETHSLAL--------PRPNG-------------------- 210
Q+ Q S A AQ A S + P+ G
Sbjct: 590 QVQAQHSRGADDAQAQPTRARQCSHTMDSSTHIYSPQRQGMGKPVARRMGLGMRVQGAAK 649
Query: 211 -PESLTWVIFRKSKDGRVHLASSSRLRLRRLLFPLSTQGCERHRSSPRRPPSAGVDVGLL 269
ESLTWVIFRKSKDGRVHLASSSRLRLRRLLFPLSTQGCERHRSSPRRPPSAGVDVGLL
Sbjct: 650 ATESLTWVIFRKSKDGRVHLASSSRLRLRRLLFPLSTQGCERHRSSPRRPPSAGVDVGLL 709
Query: 270 LAQGRGVPAPASRSCERDGRRLVEGKQDSAEHQSGPEPALPSLLSTKPPLAEDGRGVAGE 329
LAQGRGVPAPASRSCERDGRRLVEGKQDSAEHQSGPEPALPSLLSTKPPLAEDGRGVAGE
Sbjct: 710 LAQGRGVPAPASRSCERDGRRLVEGKQDSAEHQSGPEPALPSLLSTKPPLAEDGRGVAGE 769
Query: 330 VGPVDHTALLGRTAPGLPCRVALPPLSHRLLETGVQTLELPGRQGDRQRTSSSGSDKDRQ 389
VGPVDHTALLGRTAPGLPCRVALPPLSHRLLETGVQTLELPGRQGDRQRTSSSGSDKDRQ
Sbjct: 770 VGPVDHTALLGRTAPGLPCRVALPPLSHRLLETGVQTLELPGRQGDRQRTSSSGSDKDRQ 829
Query: 390 CRLVGGAVDEPVLSLGSTVLAAPRPAPGRGDCGCH 424
CRLVGGAVDEPVLSLGSTVLAAPRPAPGRGDCGCH
Sbjct: 830 CRLVGGAVDEPVLSLGSTVLAAPRPAPGRGDCGCH 864
Score = 132 bits (333), Expect = 5e-31
Identities = 61/77 (79%), Positives = 65/77 (84%)
Query: 65 PLHQSTGRLLSCLPTRRGHSRSALQKNRLHCPTEGPTNQTPYIKGTEGNGPGLGPQEEPP 124
P + G CLPTRRGHSRSALQKNRLHCPTEGPTNQTPYIKGTEGNGPGLGPQEEPP
Sbjct: 368 PAGPTKGLKCPCLPTRRGHSRSALQKNRLHCPTEGPTNQTPYIKGTEGNGPGLGPQEEPP 427
Query: 125 APLTSQPERSSSQRARG 141
APLTSQPER+ + + G
Sbjct: 428 APLTSQPERAGAGGSHG 444
Score = 74.7 bits (182), Expect = 1e-13
Identities = 73/216 (33%), Positives = 91/216 (42%), Gaps = 53/216 (24%)
Query: 48 RHWLSCTCGGEHENKELPLHQSTGRLLSCLPTRRGHSRS------------------ALQ 89
RHWLSCTCGGEHENKELPLHQSTGRLLSC RG ++S LQ
Sbjct: 282 RHWLSCTCGGEHENKELPLHQSTGRLLSC----RGKTKSRPTVGDTAEQPPPHQNFLQLQ 337
Query: 90 KNRLHCPTEGPTNQTPYIKGTEG-----NGPGLGPQEE---PPAPLTSQPERSSSQRAR- 140
+ L P +GP+ T +G G GP + P P RS+ Q+ R
Sbjct: 338 QQPLSIP-KGPSIHTRQQANPQGCPRPQAGDPAGPTKGLKCPCLPTRRGHSRSALQKNRL 396
Query: 141 -----GKTPSSPTLSPSRGSPLLL---REPSLVTDSLEAHRPCPCPPQPNQLAPQLSSAP 192
G T +P + + G+ L EP S P+QL L AP
Sbjct: 397 HCPTEGPTNQTPYIKGTEGNGPGLGPQEEPPAPLTSQPERAGAGGSHGPDQLTGNLLCAP 456
Query: 193 AQLVWA--------ETHSLALPR-----PNGPESLT 215
Q+ A ET+S+ R GP+ LT
Sbjct: 457 GQVQAAAMAPTSSQETYSVPWGRAGAGGSRGPDQLT 492
>gi|239748346 PREDICTED: hypothetical protein XP_002346641 [Homo
sapiens]
Length = 894
Score = 432 bits (1111), Expect = e-121
Identities = 213/213 (100%), Positives = 213/213 (100%)
Query: 212 ESLTWVIFRKSKDGRVHLASSSRLRLRRLLFPLSTQGCERHRSSPRRPPSAGVDVGLLLA 271
ESLTWVIFRKSKDGRVHLASSSRLRLRRLLFPLSTQGCERHRSSPRRPPSAGVDVGLLLA
Sbjct: 682 ESLTWVIFRKSKDGRVHLASSSRLRLRRLLFPLSTQGCERHRSSPRRPPSAGVDVGLLLA 741
Query: 272 QGRGVPAPASRSCERDGRRLVEGKQDSAEHQSGPEPALPSLLSTKPPLAEDGRGVAGEVG 331
QGRGVPAPASRSCERDGRRLVEGKQDSAEHQSGPEPALPSLLSTKPPLAEDGRGVAGEVG
Sbjct: 742 QGRGVPAPASRSCERDGRRLVEGKQDSAEHQSGPEPALPSLLSTKPPLAEDGRGVAGEVG 801
Query: 332 PVDHTALLGRTAPGLPCRVALPPLSHRLLETGVQTLELPGRQGDRQRTSSSGSDKDRQCR 391
PVDHTALLGRTAPGLPCRVALPPLSHRLLETGVQTLELPGRQGDRQRTSSSGSDKDRQCR
Sbjct: 802 PVDHTALLGRTAPGLPCRVALPPLSHRLLETGVQTLELPGRQGDRQRTSSSGSDKDRQCR 861
Query: 392 LVGGAVDEPVLSLGSTVLAAPRPAPGRGDCGCH 424
LVGGAVDEPVLSLGSTVLAAPRPAPGRGDCGCH
Sbjct: 862 LVGGAVDEPVLSLGSTVLAAPRPAPGRGDCGCH 894
Score = 133 bits (334), Expect = 3e-31
Identities = 101/262 (38%), Positives = 127/262 (48%), Gaps = 38/262 (14%)
Query: 65 PLHQSTGRLLSCLPTRRGHSRSALQKNRLHCPTEGPTNQTPYIKGTEGNGPGLGPQEEPP 124
P + G CLPTRRGHSRSALQKNRLHCPTEGPTNQTPYIKGTEGNGPGLGPQEEPP
Sbjct: 368 PAGPTKGLKCPCLPTRRGHSRSALQKNRLHCPTEGPTNQTPYIKGTEGNGPGLGPQEEPP 427
Query: 125 APLTSQPERSSSQRARGKTPSSPTLSPSRGSPLLLREPSLVTDSLEAHRPCPC------- 177
APLTSQPER+ + + G + L + G ++ ++ S + P
Sbjct: 428 APLTSQPERAGAGGSHGPDQLTGNLLCAPGQ---VQAAAMAPTSSQETYSVPWGRAGAGG 484
Query: 178 PPQPNQLAPQLSSAPAQLVWA--------ETHSLALPRPNGPESLTWVIFRKSKDGRVHL 229
P+QL L AP Q+ A ET+S+ P G S + +
Sbjct: 485 SRGPDQLTGNLLCAPGQVPAAAVAPTSSQETYSV----PQGRSSSQRARGKTPSSPTLSP 540
Query: 230 ASSSRLRLRRLLFPLSTQGCERHR-------SSPRRPPSAGVDVGLLLAQGRGVPAPASR 282
+ S L LR L T E HR AG+++G + R V A SR
Sbjct: 541 SRGSPLLLREP--SLVTDSLEAHRVNTVAHADCTTHARDAGLELGCAY-RVRQVQAQHSR 597
Query: 283 SCERDGRRLVEGKQDSAEHQSG 304
+ V ++ +A H SG
Sbjct: 598 GAD------VSEREHAAVHMSG 613
Score = 74.7 bits (182), Expect = 1e-13
Identities = 73/216 (33%), Positives = 91/216 (42%), Gaps = 53/216 (24%)
Query: 48 RHWLSCTCGGEHENKELPLHQSTGRLLSCLPTRRGHSRS------------------ALQ 89
RHWLSCTCGGEHENKELPLHQSTGRLLSC RG ++S LQ
Sbjct: 282 RHWLSCTCGGEHENKELPLHQSTGRLLSC----RGKTKSRPTVGDTAEQPPPHQNFLQLQ 337
Query: 90 KNRLHCPTEGPTNQTPYIKGTEG-----NGPGLGPQEE---PPAPLTSQPERSSSQRAR- 140
+ L P +GP+ T +G G GP + P P RS+ Q+ R
Sbjct: 338 QQPLSIP-KGPSIHTRQQANPQGCPRPQAGDPAGPTKGLKCPCLPTRRGHSRSALQKNRL 396
Query: 141 -----GKTPSSPTLSPSRGSPLLL---REPSLVTDSLEAHRPCPCPPQPNQLAPQLSSAP 192
G T +P + + G+ L EP S P+QL L AP
Sbjct: 397 HCPTEGPTNQTPYIKGTEGNGPGLGPQEEPPAPLTSQPERAGAGGSHGPDQLTGNLLCAP 456
Query: 193 AQLVWA--------ETHSLALPR-----PNGPESLT 215
Q+ A ET+S+ R GP+ LT
Sbjct: 457 GQVQAAAMAPTSSQETYSVPWGRAGAGGSRGPDQLT 492
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 44.3 bits (103), Expect = 2e-04
Identities = 47/171 (27%), Positives = 64/171 (37%), Gaps = 18/171 (10%)
Query: 42 PPFPKPRHWLSCTCGGEHENKELPLHQSTGRLLSCLPTRRGHSRSALQKNRLHCPTEGPT 101
PP P P GE P L +P +G +K P GP
Sbjct: 1209 PPLPPPE--------GEARKPAKPPVSPKPVLTQPVPKLQGSPTPTSKK----VPLPGPG 1256
Query: 102 NQTPYIKGTEGNGPGLGPQEEPPAPLTSQPERSSSQRARGKTPSSPTLSPSRGSPLLLRE 161
+ P +K G P + P+ PP P +P ++ + G SP SP+R P L +
Sbjct: 1257 S--PEVKRAHGTPPPVSPKPPPP-PTAPKPVKAVAGLPSGSAGPSPAPSPARQPPAALAK 1313
Query: 162 PSLVTDSLEAHRPCPCPPQPNQLAPQLSSAPAQLVWAETHSLALPRPNGPE 212
P SL A P PP P A + + P + A + A P P PE
Sbjct: 1314 PPGTPPSLGA-SPAK-PPSPGAPALHVPAKPPRAAAAAAAAAAAP-PAPPE 1361
>gi|116292168 KRAB A domain containing 1 [Homo sapiens]
Length = 1030
Score = 44.3 bits (103), Expect = 2e-04
Identities = 53/177 (29%), Positives = 65/177 (36%), Gaps = 26/177 (14%)
Query: 1 MGAALLAALSSILSHLPAVRTQLGGGAFHNEGPEFRGCVLSPPFPKPRHWLSCTC----- 55
+G A L LS+ LS R +GGG+ +EG E GC P +PRH L T
Sbjct: 11 VGTAELLPLSAFLSPSEPGRA-VGGGSHADEGQEPAGCG-DPQGGQPRHSLHLTALVQLV 68
Query: 56 --------GGEHENKELPLHQSTGRLLS---CLPTRRGHSRSALQKNRLHCPTEGPTNQ- 103
G + P +S G L P + L C +GPT+Q
Sbjct: 69 KEIPEFLFGEVKGAMDSPESESRGASLDGERASPEAAAAREPCPLRGLLSCLPDGPTSQP 128
Query: 104 ----TPYIKGTEGNGPGLGPQEEPPAPLTSQ---PERSSSQRARGKTPSSPTLSPSR 153
TP G G Q P T+ P R A G PS PT SPSR
Sbjct: 129 HLATTPTDSSCSSGPTGDGVQGSPLPIKTADKPWPTRKEGPGALGGEPSPPTHSPSR 185
>gi|42475970 synapse defective 1, Rho GTPase, homolog 1 [Homo
sapiens]
Length = 735
Score = 43.9 bits (102), Expect = 3e-04
Identities = 66/238 (27%), Positives = 81/238 (34%), Gaps = 46/238 (19%)
Query: 111 EGNGPGLGPQEEPPAPLTSQPERSSSQRARGKTPSSP--TLSPSRGSPLLLREPSLVTDS 168
E P P+ PP P PE S +A + PSSP + SP+RG+ L EPS
Sbjct: 28 ERGHPAQRPEPSPPEPEPQAPEGS---QAGAEGPSSPEASRSPARGAYLQSLEPSSRRWV 84
Query: 169 LEAHRPC----------------------------PCPPQPNQLAPQLSSAPAQLVWAET 200
L +P P PP P PQ S AE+
Sbjct: 85 LGGAKPAEDTSLGPGVPGTGEPAGEIWYNPIPEEDPRPPAPEPPGPQPGS-------AES 137
Query: 201 HSLALPRPNGPESLTWVIFRKSKDGRVHLASSSRLRLRRLLFPLSTQGCERHRSSPRRPP 260
LA P+ P S R G S +L L LS +G R R P
Sbjct: 138 EGLA-PQGAAPASPPTKASRTKSPGPARRLSIKMKKLPELRRRLSLRGPRAGRERERAAP 196
Query: 261 SAGVDVGLLLAQGRGVPAPAS-RSCERDGRRLVEGKQDSAEHQSGPEPALPSLLSTKP 317
+ V L G P PA+ R R DS E +GP PS S +P
Sbjct: 197 AGSVISRYHLDSSVGGPGPAAGPGGTRSPRAGYLSDGDSPERPAGP----PSPTSFRP 250
Score = 30.0 bits (66), Expect = 4.1
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 14/60 (23%)
Query: 135 SSQRARGKTPSSPTLSPSRGSPLLLREPSLVTDSLEAHRPCPCPPQPNQLAPQLSSAPAQ 194
S R R K P + + RG P A RP P PP+P AP+ S A A+
Sbjct: 11 SRLRGREKLPRKKSDAKERGHP--------------AQRPEPSPPEPEPQAPEGSQAGAE 56
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 43.1 bits (100), Expect = 5e-04
Identities = 73/275 (26%), Positives = 92/275 (33%), Gaps = 72/275 (26%)
Query: 115 PGLGPQEEPPAPLTSQPERSSSQRARGKTPSSPTLSPS-----RGSPLLLREPSLVTDSL 169
P P + P PL + P + P+SP +SPS R PLL P V S
Sbjct: 718 PSATPPPQAPPPLAAPP-----LQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSP 772
Query: 170 EAHRP-CPCPPQPNQLAPQLSSAPAQLVWAETHSLALPRPNGPESLTWVIFRKSKDGRVH 228
A P P P Q P L++ P Q ALP P S G+
Sbjct: 773 PASLPMSPLAKPPPQAPPALATPPLQ---------ALPSPPA-----------SFPGQAP 812
Query: 229 LASSSRLRLRRLLFP---------------LSTQGCERHRSSPRRPPSAGVDVG-----L 268
+ S+ L + L P + +PRRPP+ G D L
Sbjct: 813 FSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRL 872
Query: 269 LLAQGRGVPAPASRSCERDGRRLVEGKQDSAEHQSGPEPALPSLLSTKPPLAEDGRGV-- 326
LA G P P SRS + SGP+ A S +T P E+ RG
Sbjct: 873 TLALAPGPPPPPSRS--------------PSSTLSGPDLAGHSSSATSTP--EELRGYDS 916
Query: 327 ---AGEVGPVDHTALLGRTAPGLPCRVALPPLSHR 358
G A L P R PPL+ R
Sbjct: 917 GPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFR 951
Score = 38.5 bits (88), Expect = 0.012
Identities = 34/101 (33%), Positives = 42/101 (41%), Gaps = 9/101 (8%)
Query: 115 PGLGPQEEPPAPLTSQPERSSSQRARGKTPSSPTLSPSRGSPLLLREPSLVTDSLEAHRP 174
P P + PP+PLT+ P + S A TP P P+ SP L PS L
Sbjct: 564 PAPCPLQAPPSPLTTPPPETPSSIA---TP-PPQAPPALASPPLQGLPSPPLSPLAT--- 616
Query: 175 CPCPPQPNQLA-PQLSSAPAQLVWAETHSLALPRPNGPESL 214
P P P LA P L + P+ LA P P P +L
Sbjct: 617 -PPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNAL 656
Score = 37.7 bits (86), Expect = 0.020
Identities = 46/173 (26%), Positives = 61/173 (35%), Gaps = 18/173 (10%)
Query: 42 PPFPKPRHWLSCTCGGEHENKELPLHQSTGRLLSCLPTRRGHSRSALQKNRLHCPTEGPT 101
PP PR S + EH E P + R + +R SRS P P
Sbjct: 200 PPTEGPRK--SVSSASEHSTTE-PSPAARRRPSAGGGLQRPASRSLSSSAT---PLSSPA 253
Query: 102 NQTPYIKGTEGNGPGLGPQEEPPAPLTSQPERSSSQRARGKTPSSPTLSPSRGSPLLLRE 161
P +GT P Q +P +P + + R ++P L P SPL
Sbjct: 254 RSGPSARGTP-RAPAHPSQPKPKGLQALRPPQVTPPRK----DAAPALGPLSSSPLATPS 308
Query: 162 PSLVTDSLEAHRPCPCPPQPNQLAPQLSSAPAQLVWAETHSLALPRPNGPESL 214
PS + P PP N P ++ P A LA P P+ P SL
Sbjct: 309 PS-------GTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSL 354
Score = 32.0 bits (71), Expect = 1.1
Identities = 56/216 (25%), Positives = 74/216 (34%), Gaps = 42/216 (19%)
Query: 78 PTRRGHSRSALQKNRLHCPTEGPTNQTPYIKGTEGNGPGLGPQEEPP--------APLTS 129
P R G S + H P+ P KG + P PQ PP PL+S
Sbjct: 252 PARSGPSARGTPRAPAH-----PSQPKP--KGLQALRP---PQVTPPRKDAAPALGPLSS 301
Query: 130 QP---ERSSSQRAR-------GKTPSSPTL--SPSRGSPLLLREPSLVTDSLEAHRPCPC 177
P S +AR TP TL SP +PL L PS P P
Sbjct: 302 SPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSPSAPPSLQTLPSPP 361
Query: 178 PPQPNQLAPQLSSAPAQLVWA--------ETHSLALPRPNGPESLTWVIFRKSKDGRVHL 229
P+Q P +++ P Q + HSL P P S + S L
Sbjct: 362 ATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQAPPS---PLALSSLQATTSL 418
Query: 230 ASSSRLRLRRLLFPLSTQGCERHRSSPRRPPSAGVD 265
S + L+ +S + + +SP RP S D
Sbjct: 419 GSPT-LQATHSFLTMSPRQTQASLTSPSRPASTPPD 453
Score = 30.4 bits (67), Expect = 3.2
Identities = 58/253 (22%), Positives = 87/253 (34%), Gaps = 25/253 (9%)
Query: 117 LGPQEEPPAPLTSQPERSSSQRARGKTPSSPTLSPSRGSPLLLREPSLVTDSLEAHRPCP 176
L P PL P S+ + PS P PS+ P + P SL+ P
Sbjct: 331 LPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQ 390
Query: 177 CPPQPNQLAPQLSSAPAQLVWAE---THSLALPRPNGPESLTWVIFRKSKDGRVHLASSS 233
P + +P L + P+ L + T SL P S + R++ + L S S
Sbjct: 391 VP--HSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQT---QASLTSPS 445
Query: 234 RLRLR-----RLLFPLSTQGCERHRSSPRRPPSAGVDVGLLLAQGRGVPAPASRSCERDG 288
R L PLS ++S P + + L + + + + AS S +
Sbjct: 446 RPASTPPDSPPLQAPLSLPASPPLQTS-LSPAVSPLSSPLTIHPLQALSSLASHSPQAPL 504
Query: 289 RRLVEGKQDSAEHQSGPEPALPSLLSTKPPLAEDGRGVAGEVGPVDHTALLGRTAPGL-- 346
L+ ++ + P P T PPL + P TA T P L
Sbjct: 505 SSLIMPPLETQSSLAPPSLQTPPASLTTPPL----ENLPSLAPPPLQTASAPLTTPHLET 560
Query: 347 -----PCRVALPP 354
PC + PP
Sbjct: 561 PPCPAPCPLQAPP 573
Score = 29.3 bits (64), Expect = 7.1
Identities = 43/151 (28%), Positives = 51/151 (33%), Gaps = 24/151 (15%)
Query: 74 LSCLPTRRGHSRSALQKNRLHCPTEG------PTNQTPYIKGTEG---NGPGLGPQEEPP 124
L L + HS A + + P E P+ QTP T N P L P PP
Sbjct: 489 LQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAP---PP 545
Query: 125 APLTSQPERSSSQRARGKTPSSPTLSPSRGSPLLLREPSLVTDSLEAHRPCPCPPQPNQL 184
S P + +TP P P + P L P T P P Q
Sbjct: 546 LQTASAPLTTPHL----ETPPCPAPCPLQAPPSPLTTPPPET-------PSSIATPPPQA 594
Query: 185 APQLSSAPAQ-LVWAETHSLALPRPNGPESL 214
P L+S P Q L LA P P P L
Sbjct: 595 PPALASPPLQGLPSPPLSPLATPPPQAPPXL 625
>gi|239741486 PREDICTED: hypothetical protein XP_002342213 [Homo
sapiens]
Length = 233
Score = 41.6 bits (96), Expect = 0.001
Identities = 66/234 (28%), Positives = 83/234 (35%), Gaps = 57/234 (24%)
Query: 128 TSQPERSSSQ----RARGKTPSSPTLSPSRGSPLLLREPSLVTDSLEAHRPCPCPPQPNQ 183
+S+P S Q G+ +SP SP R + L P++ R CP PP+ +
Sbjct: 11 SSKPAASGVQSPTFHGSGRQTASP--SPPRCAKTQLTPPAI--------RSCPLPPEEDL 60
Query: 184 LAPQLSSAPAQLVW--AETHSLALPRPNGPESLTWVIFRKSKDGRVHLASSSRLRLRRLL 241
L PQ SAP L+ + T LAL P+ P+ H S SR R L
Sbjct: 61 LTPQ-GSAPRLLLGEASLTSPLALIPPSEPQ---------------HSPSKSRALCNRGL 104
Query: 242 FPLS---TQGCERHRSSPRRP-------------PSAGVDVGLLLAQGRGVPA------- 278
S QG SP P PS G VG L GRG A
Sbjct: 105 RSTSRCTQQGLPSVPPSPLTPLPPSPTAPRRSQYPSPGSRVGRGLGTGRGKLAHRVAPSK 164
Query: 279 -PASRSCERDGRRLVEGKQDSAEHQSGPEPALPSLLSTKPPLAEDGRGVAGEVG 331
P R+C GR H +G PA P A +G G +G
Sbjct: 165 EPPERACGSRGRSTGWAASSPKTHAAGQAPAAARSGRGAGP-AREGSGAPSGLG 217
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 41.6 bits (96), Expect = 0.001
Identities = 85/352 (24%), Positives = 119/352 (33%), Gaps = 53/352 (15%)
Query: 24 GGGAFHNEGPEFRGCVLSPPFPKPRHWLSCTCGGEHENKELPLHQSTGRLLSCLP--TRR 81
GGG+F GP G + PK R + + PL GR S P
Sbjct: 88 GGGSFGGGGPPGLGGLFQAGMPKLRS--TANRDNDSGGSRPPLLPPGGRSTSAKPFSPPS 145
Query: 82 GHSRSAL-QKNRLHCPTEGPTNQTPYIKGTEGNGPGLGPQEEPPAPLTSQPERSS----- 135
G R + P E N+ P + G+ P P PP P T +P +SS
Sbjct: 146 GPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIP---PPVPSTPRPIQSSPHNRG 202
Query: 136 ------SQRARGKTPSSPTLSPSRGSPL---LLREPSLVTDSLEAHRPCPCPPQPNQLAP 186
R P+ P +RG+ L +R+ L + S ++RP P PP P++
Sbjct: 203 SPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRP-PLPPTPSRALD 261
Query: 187 QLSSAPAQLVW--AETHSLALPRPNGPESLTWVIFRKSKDGRVHLASSSRLRLRRLLFPL 244
P V H A+P P + + ++SS+ P
Sbjct: 262 DKPPPPPPPVGNRPSIHREAVPPPPPQNN------KPPVPSTPRPSASSQA-------PP 308
Query: 245 STQGCERHRSSPRRPPSAGVDVGLLLAQGRGVPAPASRSCERDGRRLVEGKQDSAEHQSG 304
R P P S+G D L Q + ++ GR SG
Sbjct: 309 PPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGR-------------SG 355
Query: 305 PEPALPSLLSTKPPLAEDGRGVAGEVGPVDHTALLGRTAPGLPCRVALPPLS 356
P P PS PP D G +G + P + G T+ LP LP S
Sbjct: 356 PLPPPPS--ERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRS 405
Score = 31.6 bits (70), Expect = 1.4
Identities = 31/111 (27%), Positives = 41/111 (36%), Gaps = 16/111 (14%)
Query: 101 TNQTPYIKGTEGNGP-GLGPQEEPPAPLTSQPERS-------------SSQRARGKTPSS 146
++ TP + +GP P E PP P+ P RS S+ RA TP
Sbjct: 342 SSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQL 401
Query: 147 PTLSPSRGSPLLLREPSLVTDSLEAHRPCPCPPQPNQLAPQLSSAPAQLVW 197
P+ S SP P L D A P P PP + +P + W
Sbjct: 402 PSRS-GVDSPRSGPRPPLPPDRPSAGAP-PPPPPSTSIRNGFQDSPCEDEW 450
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 41.6 bits (96), Expect = 0.001
Identities = 85/352 (24%), Positives = 119/352 (33%), Gaps = 53/352 (15%)
Query: 24 GGGAFHNEGPEFRGCVLSPPFPKPRHWLSCTCGGEHENKELPLHQSTGRLLSCLP--TRR 81
GGG+F GP G + PK R + + PL GR S P
Sbjct: 88 GGGSFGGGGPPGLGGLFQAGMPKLRS--TANRDNDSGGSRPPLLPPGGRSTSAKPFSPPS 145
Query: 82 GHSRSAL-QKNRLHCPTEGPTNQTPYIKGTEGNGPGLGPQEEPPAPLTSQPERSS----- 135
G R + P E N+ P + G+ P P PP P T +P +SS
Sbjct: 146 GPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIP---PPVPSTPRPIQSSPHNRG 202
Query: 136 ------SQRARGKTPSSPTLSPSRGSPL---LLREPSLVTDSLEAHRPCPCPPQPNQLAP 186
R P+ P +RG+ L +R+ L + S ++RP P PP P++
Sbjct: 203 SPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRP-PLPPTPSRALD 261
Query: 187 QLSSAPAQLVW--AETHSLALPRPNGPESLTWVIFRKSKDGRVHLASSSRLRLRRLLFPL 244
P V H A+P P + + ++SS+ P
Sbjct: 262 DKPPPPPPPVGNRPSIHREAVPPPPPQNN------KPPVPSTPRPSASSQA-------PP 308
Query: 245 STQGCERHRSSPRRPPSAGVDVGLLLAQGRGVPAPASRSCERDGRRLVEGKQDSAEHQSG 304
R P P S+G D L Q + ++ GR SG
Sbjct: 309 PPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGR-------------SG 355
Query: 305 PEPALPSLLSTKPPLAEDGRGVAGEVGPVDHTALLGRTAPGLPCRVALPPLS 356
P P PS PP D G +G + P + G T+ LP LP S
Sbjct: 356 PLPPPPS--ERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQLPSRS 405
Score = 31.6 bits (70), Expect = 1.4
Identities = 31/111 (27%), Positives = 41/111 (36%), Gaps = 16/111 (14%)
Query: 101 TNQTPYIKGTEGNGP-GLGPQEEPPAPLTSQPERS-------------SSQRARGKTPSS 146
++ TP + +GP P E PP P+ P RS S+ RA TP
Sbjct: 342 SSSTPPLPSPGRSGPLPPPPSERPPPPVRDPPGRSGPLPPPPPVSRNGSTSRALPATPQL 401
Query: 147 PTLSPSRGSPLLLREPSLVTDSLEAHRPCPCPPQPNQLAPQLSSAPAQLVW 197
P+ S SP P L D A P P PP + +P + W
Sbjct: 402 PSRS-GVDSPRSGPRPPLPPDRPSAGAP-PPPPPSTSIRNGFQDSPCEDEW 450
>gi|95147555 microtubule-associated protein 1A [Homo sapiens]
Length = 2803
Score = 40.8 bits (94), Expect = 0.002
Identities = 72/258 (27%), Positives = 95/258 (36%), Gaps = 27/258 (10%)
Query: 71 GRLLSCLPTRRGHSRSALQKNRLHCPTEGPTNQTPYIKGTEGNGPGLGPQEEPPAPLT-S 129
G +LSC P RR S S + R H + T+ + KG PP P+
Sbjct: 2079 GNILSCSPDRR--SPSPKESGRSHW--DDSTSDSELEKGAREQPEKEAQSPSPPHPIPMG 2134
Query: 130 QPERSSSQRARGKTPSSPTLSPSRGSPLLLREPSLVTDSLEAHRPCPCPPQPNQLAPQLS 189
P A P L P+R S L + SL+ P PPQ A S
Sbjct: 2135 SPTLWPETEAHVSPPLDSHLGPARPS-LDFPASAFGFSSLQ-----PAPPQLPSPAEPRS 2188
Query: 190 SAPAQLVWAETHSLALPRPNGPESLTWVIFRKSKDGRVHLASSSRLRLRRLLFPLSTQGC 249
+ L ++ +LAL GP + T R + V A S L +L P S+ G
Sbjct: 2189 APCGSLAFSGDRALALAP--GPPTRT----RHDEYLEVTKAPSLDSSLPQLPSP-SSPGA 2241
Query: 250 ERHRSSPRRPPSAGVDVGLLLAQGRGVPAPASRSCERDGRRLVEGKQDSAEHQSGPEPAL 309
+ PR P S + G + S ER L +Q+S E G EPA
Sbjct: 2242 PLLSNLPR-PASPALSEG---SSSEATTPVISSVAERFSPSLEAAEQESGELDPGMEPAA 2297
Query: 310 PSL-----LSTKPPLAED 322
SL LS PP + D
Sbjct: 2298 HSLWDLTPLSPAPPASLD 2315
>gi|217416343 fibrosin-like 1 [Homo sapiens]
Length = 1045
Score = 39.3 bits (90), Expect = 0.007
Identities = 44/153 (28%), Positives = 61/153 (39%), Gaps = 37/153 (24%)
Query: 67 HQSTGRLLSCLPTRRGHSRSALQKNRLHCPTEGPTNQTPYIKGTEGNGPGLGPQEEPPAP 126
H +GR SC ++++ +L P GT+ GP L E P
Sbjct: 197 HAVSGRGYSCDSESGPDDKASVGSEKLFAP------------GTD-KGPALEKSEAKAGP 243
Query: 127 LTSQPERSSSQRARGKTPSS--PTLSP-------------SRGSPLLLREPSLVTDSLEA 171
+ P+ S +R+R + S PT SP SR +PL+ +EP +
Sbjct: 244 V---PKVSGLERSRELSAESFLPTASPAPHAAPCPGPPPGSRANPLVKKEPP----APHR 296
Query: 172 HRPCPCPPQPNQLAPQLSSAPAQLVWAETHSLA 204
H P P PPQP L P + PA L HS A
Sbjct: 297 HTPQPPPPQPRGLLP--THVPASLGAFAGHSQA 327
>gi|194578898 hypothetical protein LOC100170841 [Homo sapiens]
Length = 379
Score = 39.3 bits (90), Expect = 0.007
Identities = 73/266 (27%), Positives = 91/266 (34%), Gaps = 56/266 (21%)
Query: 85 RSALQKNRLHCPTEGPTNQTPYIKGTEGNGPGLGPQEEPPAPLTSQPERSSSQRARGKTP 144
RS R P + T + PGL PQ P A S P+ SS + P
Sbjct: 132 RSCAPPGRCPAPPHPRESTTSFASAPPRPAPGLEPQRGPAA---SPPQEPSS-----RPP 183
Query: 145 SSPT-LSPSRGSPLLLREPSLVTDSLEAHRPCPCPPQPNQLAPQLSSAPAQLVWAETHSL 203
S P LS P P L +P P AP+ AP A + S
Sbjct: 184 SPPAGLSTEPAGPGTAPRPFL------PGQPAEVDGNPPPAAPE---AP-----AASPST 229
Query: 204 ALPRPNGPESLTWVIFRKSKDGRVHLASSSRLRLRRLLFPLSTQGCERHRSSPRRPPSAG 263
A P P P L F + L S+L F L T R P RPP+ G
Sbjct: 230 ASPAPAAPGDLRQEHFDR-------LIRRSKLWCYAKGFALDTPSLRR---GPERPPAKG 279
Query: 264 VDVGLLLAQGRGVPAPASRSCERDGRRLVEGKQDSAEHQSGPEPALP-----SLLSTKPP 318
G A+ R +PAP R+ + RR P P LP SLL+ P
Sbjct: 280 PARG--AAKKRRLPAPPPRTAQ--PRR--------------PAPTLPTTSTFSLLNCFPC 321
Query: 319 LAEDGRGVAGEVGPVDHTALLGRTAP 344
G G++ P L G + P
Sbjct: 322 PPALVVGEDGDLKPASSLRLQGDSKP 347
Score = 35.8 bits (81), Expect = 0.076
Identities = 38/143 (26%), Positives = 57/143 (39%), Gaps = 27/143 (18%)
Query: 80 RRGHSRSALQKNRLHCPTEGPTNQTPYIKGTEGNGPGLGPQEEPPAPLTSQPERSSSQRA 139
R+ H +++++L C +G TP ++ GP E PPA P R ++++
Sbjct: 241 RQEHFDRLIRRSKLWCYAKGFALDTPSLR----RGP-----ERPPA---KGPARGAAKKR 288
Query: 140 RGKTPSSPTLSPSRGSPLLLREPSLVTDSLEAHRPCP-----------CPPQPNQLAPQL 188
R P T P R +P L P+ T SL PCP P +L
Sbjct: 289 RLPAPPPRTAQPRRPAPTL---PTTSTFSLLNCFPCPPALVVGEDGDLKPASSLRLQGDS 345
Query: 189 SSAPAQLVWA-ETHSLALPRPNG 210
PA +W + A+P P G
Sbjct: 346 KPPPAHPLWRWQMGGPAVPEPPG 368
>gi|24797153 faciogenital dysplasia protein [Homo sapiens]
Length = 961
Score = 38.9 bits (89), Expect = 0.009
Identities = 52/191 (27%), Positives = 69/191 (36%), Gaps = 24/191 (12%)
Query: 96 PTEGPTNQTPYIKGTEGNGPGLGPQE------------EPPAPLTSQPERSSSQRARGKT 143
PTE P+ + +K G P + P+ EP P S+P + + A+G
Sbjct: 140 PTETPSQRPSPLKRAPGPKPQVPPKPSYLQMPRMPPPLEPIPPPPSRPLPADPRVAKGLA 199
Query: 144 PSSPTLSPSRGSPLLL----REPSLVTDSLEAHRPCPCPPQPNQLAPQLSSAP--AQLVW 197
P + S L+ REP +V P P PP+P L PQ +S P QL
Sbjct: 200 PRAEASPSSAAVSSLIEKFEREPVIVASDRPVPGPSPGPPEPVML-PQPTSQPPVPQLPE 258
Query: 198 AETHSLALPRPNGPESLTWVIFRKSKDGRVHLASSSRLRLRRLLFPLSTQGCERHRSSPR 257
E GP V R S + S+S F +S G H P
Sbjct: 259 GEASRCLFLLAPGPRDGEKVPNRDSGIDSISSPSNS----EETCF-VSDDGPPSHSLCPG 313
Query: 258 RPPSAGVDVGL 268
P A V V L
Sbjct: 314 PPALASVPVAL 324
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 38.5 bits (88), Expect = 0.012
Identities = 76/297 (25%), Positives = 104/297 (35%), Gaps = 52/297 (17%)
Query: 119 PQEEPPAPLTSQPERSSSQRARGKTPSSPTLSPSRGSPLLLREPSLVTDSLEAH----RP 174
P+ PP PL+S P +S A K S S+ P L L++ + ++ P
Sbjct: 1327 PESSPPLPLSSLPPEASQDSAPYKDQLS-----SKEQPSFLASQQLLSQAGPSNPPGAPP 1381
Query: 175 CPCPPQ--PNQLAPQLSSAPAQLVWAETHSLALPR---PNGPESLTWVIFRKSKDGRVHL 229
P P P PQ +APA E S + P P+ LT + H
Sbjct: 1382 APLAPSSPPVTALPQDGAAPATSTMPEPASGTASQAGGPGTPQGLTSELETSQPLAETHE 1441
Query: 230 ASSSRLRLRRLLF------PLSTQGCERHRSSPRRP---------PSAGVDVGLLLAQGR 274
A L ++ L+ P R S+PR P P +G L
Sbjct: 1442 AP---LAVQPLVVGLAPCTPAPEAASTRDASAPREPLPPPAPEPSPHSGTPQPAL----- 1493
Query: 275 GVPAPASRSCERDGRRLVEGKQDSAEHQSGPEPALPSLLSTKPP--LAEDGRGVAGEVGP 332
G PAP + G A Q P P L + +PP L DG G VG
Sbjct: 1494 GQPAPLLPA--------AVGAVSLATSQL-PSPPLGPTVPPQPPSALESDGEGPPPRVGF 1544
Query: 333 VDHT-ALLGRTAPGLPCRVALPPLSHRL---LETGVQTLELPGRQGDRQRTSSSGSD 385
VD T L L + +P S +E G + L +GD+ R+ G D
Sbjct: 1545 VDSTIKSLDEKLRTLLYQEHVPTSSASAGTPVEVGDRDFTLEPLRGDQPRSEVCGGD 1601
>gi|146134388 YLP motif containing 1 [Homo sapiens]
Length = 2146
Score = 38.5 bits (88), Expect = 0.012
Identities = 63/236 (26%), Positives = 86/236 (36%), Gaps = 36/236 (15%)
Query: 115 PGLGPQEEPPAPLTSQPERSS--SQRARGKTPSSPTLS-PSRGSPLLLREPSLVTDSLEA 171
PG+ P PP+ TS P S + G P P S S G P +L PSL + +
Sbjct: 558 PGMPPPVMPPSLPTSVPPPGMPPSLSSAGPPPVLPPPSLSSAGPPPVLPPPSLSSTAPPP 617
Query: 172 HRPCP----------CPPQ--PNQLAPQLSSAPAQLVWAETHSLALPRPNGPESLTWVIF 219
P P PP P + PQL++AP + S +P T V F
Sbjct: 618 VMPLPPLSSATPPPGIPPPGVPQGIPPQLTAAPVPPASSSQSSQVPEKPRPALLPTPVSF 677
Query: 220 RKSKDGRVH--LAS-------SSRLRLRRLLFPLST----QGCERHRSSPRRPPSAGVDV 266
+ H L S +S+ L + P S+ QG ++P +P +A D+
Sbjct: 678 GSAPPTTYHPPLQSAGPSEQVNSKAPLSKSALPYSSFSSDQGLGESSAAPSQPITAVKDM 737
Query: 267 -----GLLLAQGRGVPAPASRSCERDGRRLVEGKQDSAEHQSGPEPALPSLLSTKP 317
GLL R + R DG R E D GP P P +P
Sbjct: 738 PVRSGGLLPDPPRSSYLESPRGPRFDGPRRFE---DLGSRCEGPRPKGPRFEGNRP 790
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 38.1 bits (87), Expect = 0.015
Identities = 30/110 (27%), Positives = 43/110 (39%), Gaps = 11/110 (10%)
Query: 113 NGPGLGPQEEPPAPLTSQPERSSSQRARGKTPSSPTLS-PSRGSPLLLREPSLVTDS--- 168
+G G GP PPAP + + G T SP + ++ SP + ++D
Sbjct: 532 SGSGHGPCTPPPAPANFEDVAPTGSGEPGATRESPKANGQNQASPCSSGDDMEISDDDRG 591
Query: 169 -------LEAHRPCPCPPQPNQLAPQLSSAPAQLVWAETHSLALPRPNGP 211
+P P PP P P L+S P + L PRP+GP
Sbjct: 592 GSPPPAPTPPQQPPPPPPPPPPPPPYLASLPLGYPPHQPAYLLPPRPDGP 641
>gi|239753975 PREDICTED: hypothetical protein [Homo sapiens]
Length = 389
Score = 37.7 bits (86), Expect = 0.020
Identities = 28/72 (38%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 144 PSSPTLSPSRGSPLLLR-EPSLVTDSLEAHRPCPCP---PQPNQLAPQLSSAPAQLVWAE 199
PSSP +P+R P ++ PS T EA P P P+P L P+ S AP W +
Sbjct: 112 PSSPH-APTRPPPQAVQPRPSEPTPGSEALPPGSLPEGEPRPYALPPRESPAPRPFRWGD 170
Query: 200 THSLALPRPNGP 211
S A PRP P
Sbjct: 171 PFSPAPPRPQPP 182
>gi|207113164 Treacher Collins-Franceschetti syndrome 1 isoform f
[Homo sapiens]
Length = 1412
Score = 37.7 bits (86), Expect = 0.020
Identities = 54/228 (23%), Positives = 94/228 (41%), Gaps = 27/228 (11%)
Query: 125 APLTSQPERSSSQRARGKTPSSPTLSPSRGSPLLLREPSLVTDSLEA--HRPCPCPPQPN 182
AP P + ++ GKT P ++ ++ RE + S E+ P +P+
Sbjct: 299 APAKESPRKGAAPAPPGKT--GPAVAKAQAGK---REEDSQSSSEESDSEEEAPAQAKPS 353
Query: 183 QLAPQL--SSAPAQLVWAETHSLALPRPNGPESLTWVIFRKSKDGRVHLASSSRLRLRRL 240
APQ+ +SAPA+ + + A PR GP + + ++ +D R +S R
Sbjct: 354 GKAPQVRAASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDSR--SSSEESDSDREA 411
Query: 241 LFPLSTQGCERHRSSPRRPPSAGVDVGLLLAQGRGVP----APASRSC-----ERDGRRL 291
L ++ + SP+ P++ + +G L VP PA+ S E D
Sbjct: 412 LAAMNAAQVKPLGKSPQVKPASTMGMGPLGKGAGPVPPGKVGPATPSAQVGKWEEDSESS 471
Query: 292 VEGKQDSAEHQ------SGPEPALPSLLSTKPPLAEDGRGVAGEVGPV 333
E DS++ + E +L ++L K P + +G + GPV
Sbjct: 472 SEESSDSSDGEVPTAVAPAQEKSLGNILQAK-PTSSPAKGPPQKAGPV 518
>gi|207113162 Treacher Collins-Franceschetti syndrome 1 isoform e
[Homo sapiens]
Length = 1451
Score = 37.7 bits (86), Expect = 0.020
Identities = 54/228 (23%), Positives = 94/228 (41%), Gaps = 27/228 (11%)
Query: 125 APLTSQPERSSSQRARGKTPSSPTLSPSRGSPLLLREPSLVTDSLEA--HRPCPCPPQPN 182
AP P + ++ GKT P ++ ++ RE + S E+ P +P+
Sbjct: 376 APAKESPRKGAAPAPPGKT--GPAVAKAQAGK---REEDSQSSSEESDSEEEAPAQAKPS 430
Query: 183 QLAPQL--SSAPAQLVWAETHSLALPRPNGPESLTWVIFRKSKDGRVHLASSSRLRLRRL 240
APQ+ +SAPA+ + + A PR GP + + ++ +D R +S R
Sbjct: 431 GKAPQVRAASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDSR--SSSEESDSDREA 488
Query: 241 LFPLSTQGCERHRSSPRRPPSAGVDVGLLLAQGRGVP----APASRSC-----ERDGRRL 291
L ++ + SP+ P++ + +G L VP PA+ S E D
Sbjct: 489 LAAMNAAQVKPLGKSPQVKPASTMGMGPLGKGAGPVPPGKVGPATPSAQVGKWEEDSESS 548
Query: 292 VEGKQDSAEHQ------SGPEPALPSLLSTKPPLAEDGRGVAGEVGPV 333
E DS++ + E +L ++L K P + +G + GPV
Sbjct: 549 SEESSDSSDGEVPTAVAPAQEKSLGNILQAK-PTSSPAKGPPQKAGPV 595
Score = 29.6 bits (65), Expect = 5.4
Identities = 27/124 (21%), Positives = 47/124 (37%), Gaps = 14/124 (11%)
Query: 67 HQSTGRLLSCLPTRRGHSRSALQKNRLHCPTEGPTNQTPYIKGTEGNG--PGLGPQEEPP 124
H +TG+ ++ L + + +SA P+ T + TE G P G +P
Sbjct: 141 HPATGKTVANLLSGKSPRKSA-----------EPSANTTLVSETEEEGSVPAFGAAAKPG 189
Query: 125 APLTSQPERSSSQRARGKTPSSPTLSPSRGSPLLLREPSLVTDSLEAHRPCPCPPQPNQL 184
Q + SS + + PS P ++ S+ T A + P P + +
Sbjct: 190 MVSAGQADSSSEDTSSSSDETDVEGKPSV-KPAQVKASSVSTKESPARKAAPAPGKVGDV 248
Query: 185 APQL 188
PQ+
Sbjct: 249 TPQV 252
>gi|207113160 Treacher Collins-Franceschetti syndrome 1 isoform d
[Homo sapiens]
Length = 1488
Score = 37.7 bits (86), Expect = 0.020
Identities = 54/228 (23%), Positives = 94/228 (41%), Gaps = 27/228 (11%)
Query: 125 APLTSQPERSSSQRARGKTPSSPTLSPSRGSPLLLREPSLVTDSLEA--HRPCPCPPQPN 182
AP P + ++ GKT P ++ ++ RE + S E+ P +P+
Sbjct: 376 APAKESPRKGAAPAPPGKT--GPAVAKAQAGK---REEDSQSSSEESDSEEEAPAQAKPS 430
Query: 183 QLAPQL--SSAPAQLVWAETHSLALPRPNGPESLTWVIFRKSKDGRVHLASSSRLRLRRL 240
APQ+ +SAPA+ + + A PR GP + + ++ +D R +S R
Sbjct: 431 GKAPQVRAASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDSR--SSSEESDSDREA 488
Query: 241 LFPLSTQGCERHRSSPRRPPSAGVDVGLLLAQGRGVP----APASRSC-----ERDGRRL 291
L ++ + SP+ P++ + +G L VP PA+ S E D
Sbjct: 489 LAAMNAAQVKPLGKSPQVKPASTMGMGPLGKGAGPVPPGKVGPATPSAQVGKWEEDSESS 548
Query: 292 VEGKQDSAEHQ------SGPEPALPSLLSTKPPLAEDGRGVAGEVGPV 333
E DS++ + E +L ++L K P + +G + GPV
Sbjct: 549 SEESSDSSDGEVPTAVAPAQEKSLGNILQAK-PTSSPAKGPPQKAGPV 595
Score = 29.6 bits (65), Expect = 5.4
Identities = 27/124 (21%), Positives = 47/124 (37%), Gaps = 14/124 (11%)
Query: 67 HQSTGRLLSCLPTRRGHSRSALQKNRLHCPTEGPTNQTPYIKGTEGNG--PGLGPQEEPP 124
H +TG+ ++ L + + +SA P+ T + TE G P G +P
Sbjct: 141 HPATGKTVANLLSGKSPRKSA-----------EPSANTTLVSETEEEGSVPAFGAAAKPG 189
Query: 125 APLTSQPERSSSQRARGKTPSSPTLSPSRGSPLLLREPSLVTDSLEAHRPCPCPPQPNQL 184
Q + SS + + PS P ++ S+ T A + P P + +
Sbjct: 190 MVSAGQADSSSEDTSSSSDETDVEGKPSV-KPAQVKASSVSTKESPARKAAPAPGKVGDV 248
Query: 185 APQL 188
PQ+
Sbjct: 249 TPQV 252
>gi|57164975 Treacher Collins-Franceschetti syndrome 1 isoform b
[Homo sapiens]
Length = 1411
Score = 37.7 bits (86), Expect = 0.020
Identities = 54/228 (23%), Positives = 94/228 (41%), Gaps = 27/228 (11%)
Query: 125 APLTSQPERSSSQRARGKTPSSPTLSPSRGSPLLLREPSLVTDSLEA--HRPCPCPPQPN 182
AP P + ++ GKT P ++ ++ RE + S E+ P +P+
Sbjct: 299 APAKESPRKGAAPAPPGKT--GPAVAKAQAGK---REEDSQSSSEESDSEEEAPAQAKPS 353
Query: 183 QLAPQL--SSAPAQLVWAETHSLALPRPNGPESLTWVIFRKSKDGRVHLASSSRLRLRRL 240
APQ+ +SAPA+ + + A PR GP + + ++ +D R +S R
Sbjct: 354 GKAPQVRAASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDSR--SSSEESDSDREA 411
Query: 241 LFPLSTQGCERHRSSPRRPPSAGVDVGLLLAQGRGVP----APASRSC-----ERDGRRL 291
L ++ + SP+ P++ + +G L VP PA+ S E D
Sbjct: 412 LAAMNAAQVKPLGKSPQVKPASTMGMGPLGKGAGPVPPGKVGPATPSAQVGKWEEDSESS 471
Query: 292 VEGKQDSAEHQ------SGPEPALPSLLSTKPPLAEDGRGVAGEVGPV 333
E DS++ + E +L ++L K P + +G + GPV
Sbjct: 472 SEESSDSSDGEVPTAVAPAQEKSLGNILQAK-PTSSPAKGPPQKAGPV 518
>gi|57164977 Treacher Collins-Franceschetti syndrome 1 isoform a
[Homo sapiens]
Length = 1450
Score = 37.7 bits (86), Expect = 0.020
Identities = 54/228 (23%), Positives = 94/228 (41%), Gaps = 27/228 (11%)
Query: 125 APLTSQPERSSSQRARGKTPSSPTLSPSRGSPLLLREPSLVTDSLEA--HRPCPCPPQPN 182
AP P + ++ GKT P ++ ++ RE + S E+ P +P+
Sbjct: 376 APAKESPRKGAAPAPPGKT--GPAVAKAQAGK---REEDSQSSSEESDSEEEAPAQAKPS 430
Query: 183 QLAPQL--SSAPAQLVWAETHSLALPRPNGPESLTWVIFRKSKDGRVHLASSSRLRLRRL 240
APQ+ +SAPA+ + + A PR GP + + ++ +D R +S R
Sbjct: 431 GKAPQVRAASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDSR--SSSEESDSDREA 488
Query: 241 LFPLSTQGCERHRSSPRRPPSAGVDVGLLLAQGRGVP----APASRSC-----ERDGRRL 291
L ++ + SP+ P++ + +G L VP PA+ S E D
Sbjct: 489 LAAMNAAQVKPLGKSPQVKPASTMGMGPLGKGAGPVPPGKVGPATPSAQVGKWEEDSESS 548
Query: 292 VEGKQDSAEHQ------SGPEPALPSLLSTKPPLAEDGRGVAGEVGPV 333
E DS++ + E +L ++L K P + +G + GPV
Sbjct: 549 SEESSDSSDGEVPTAVAPAQEKSLGNILQAK-PTSSPAKGPPQKAGPV 595
Score = 29.6 bits (65), Expect = 5.4
Identities = 27/124 (21%), Positives = 47/124 (37%), Gaps = 14/124 (11%)
Query: 67 HQSTGRLLSCLPTRRGHSRSALQKNRLHCPTEGPTNQTPYIKGTEGNG--PGLGPQEEPP 124
H +TG+ ++ L + + +SA P+ T + TE G P G +P
Sbjct: 141 HPATGKTVANLLSGKSPRKSA-----------EPSANTTLVSETEEEGSVPAFGAAAKPG 189
Query: 125 APLTSQPERSSSQRARGKTPSSPTLSPSRGSPLLLREPSLVTDSLEAHRPCPCPPQPNQL 184
Q + SS + + PS P ++ S+ T A + P P + +
Sbjct: 190 MVSAGQADSSSEDTSSSSDETDVEGKPSV-KPAQVKASSVSTKESPARKAAPAPGKVGDV 248
Query: 185 APQL 188
PQ+
Sbjct: 249 TPQV 252
>gi|57164979 Treacher Collins-Franceschetti syndrome 1 isoform c
[Homo sapiens]
Length = 958
Score = 37.7 bits (86), Expect = 0.020
Identities = 54/228 (23%), Positives = 94/228 (41%), Gaps = 27/228 (11%)
Query: 125 APLTSQPERSSSQRARGKTPSSPTLSPSRGSPLLLREPSLVTDSLEA--HRPCPCPPQPN 182
AP P + ++ GKT P ++ ++ RE + S E+ P +P+
Sbjct: 376 APAKESPRKGAAPAPPGKT--GPAVAKAQAGK---REEDSQSSSEESDSEEEAPAQAKPS 430
Query: 183 QLAPQL--SSAPAQLVWAETHSLALPRPNGPESLTWVIFRKSKDGRVHLASSSRLRLRRL 240
APQ+ +SAPA+ + + A PR GP + + ++ +D R +S R
Sbjct: 431 GKAPQVRAASAPAKESPRKGAAPAPPRKTGPAAAQVQVGKQEEDSR--SSSEESDSDREA 488
Query: 241 LFPLSTQGCERHRSSPRRPPSAGVDVGLLLAQGRGVP----APASRSC-----ERDGRRL 291
L ++ + SP+ P++ + +G L VP PA+ S E D
Sbjct: 489 LAAMNAAQVKPLGKSPQVKPASTMGMGPLGKGAGPVPPGKVGPATPSAQVGKWEEDSESS 548
Query: 292 VEGKQDSAEHQ------SGPEPALPSLLSTKPPLAEDGRGVAGEVGPV 333
E DS++ + E +L ++L K P + +G + GPV
Sbjct: 549 SEESSDSSDGEVPTAVAPAQEKSLGNILQAK-PTSSPAKGPPQKAGPV 595
Score = 29.6 bits (65), Expect = 5.4
Identities = 27/124 (21%), Positives = 47/124 (37%), Gaps = 14/124 (11%)
Query: 67 HQSTGRLLSCLPTRRGHSRSALQKNRLHCPTEGPTNQTPYIKGTEGNG--PGLGPQEEPP 124
H +TG+ ++ L + + +SA P+ T + TE G P G +P
Sbjct: 141 HPATGKTVANLLSGKSPRKSA-----------EPSANTTLVSETEEEGSVPAFGAAAKPG 189
Query: 125 APLTSQPERSSSQRARGKTPSSPTLSPSRGSPLLLREPSLVTDSLEAHRPCPCPPQPNQL 184
Q + SS + + PS P ++ S+ T A + P P + +
Sbjct: 190 MVSAGQADSSSEDTSSSSDETDVEGKPSV-KPAQVKASSVSTKESPARKAAPAPGKVGDV 248
Query: 185 APQL 188
PQ+
Sbjct: 249 TPQV 252
>gi|50345997 E1A binding protein p300 [Homo sapiens]
Length = 2414
Score = 37.4 bits (85), Expect = 0.026
Identities = 31/121 (25%), Positives = 48/121 (39%), Gaps = 10/121 (8%)
Query: 100 PTNQTPYIKGTEGNGPGLGPQEEPPAPLTSQPERSSSQRARGKTPSSPTLSPSRGSPLLL 159
P+NQ ++ T+ G+ P AP + Q S +Q + P + + P +
Sbjct: 758 PSNQGQFLPQTQFPSQGMNVTNIPLAPSSGQAPVSQAQMSSSSCPVNSPIMPPGSQGSHI 817
Query: 160 REPSLVTDSLEAHRPCPCP---PQPNQLAPQLSSAPAQLVWAETHSLALP----RPNGPE 212
P L +L + P P P P P+ P + AQ A T +P P GP+
Sbjct: 818 HCPQLPQPALHQNSPSPVPSRTPTPHHTPPSIG---AQQPPATTIPAPVPTPPAMPPGPQ 874
Query: 213 S 213
S
Sbjct: 875 S 875
>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
sapiens]
Length = 2715
Score = 37.4 bits (85), Expect = 0.026
Identities = 45/161 (27%), Positives = 62/161 (38%), Gaps = 23/161 (14%)
Query: 41 SPPFPKPRHWLSCTCGGEHENKELPLHQSTGRLLSC----LPTRRGHSRSALQKNRLHCP 96
SPP P P S GG E+ +ST L + +P S ++ R
Sbjct: 493 SPPTPTP----STATGGPPEDSPTVAPKSTTFLKNIRQFIMPVVSARSSRVIKTPRRFMD 548
Query: 97 TEGP----TNQTPYIKGTEGNGPGLGPQEEPPAPLTSQPERSSSQRARGKTPSSPTLSPS 152
+ P +P ++ P + PQE PAP+ S P + PS+P P
Sbjct: 549 EDPPKPPKVEVSPVLRPPITTSPPV-PQE--PAPVPSPPRAPTP-------PSTPVPLPE 598
Query: 153 RGSPLLLREPSLVTDSLEAHRPCPCPPQPNQLAPQLSSAPA 193
+ +L REP+ SL P P P P AP APA
Sbjct: 599 KRRSIL-REPTFRWTSLTRELPPPPPAPPPPPAPSPPPAPA 638
Score = 32.0 bits (71), Expect = 1.1
Identities = 34/112 (30%), Positives = 42/112 (37%), Gaps = 19/112 (16%)
Query: 100 PTNQTPYIKGTEG-NGPGLGPQEEPPAPLTSQ---------------PERSSSQRARGKT 143
PT ++ G G LGP EPP P TS+ E +
Sbjct: 2159 PTRTFAWLPGAPGVRVLSLGPAPEPPKPATSKIILVNKLGQVFVKMAGEGEPVPPPVKQP 2218
Query: 144 PSSPTLSPSRGSPLLLREPSL--VTDSLEAHRPCPCPPQPNQLAPQLSSAPA 193
P PT+SP+ + L L V + RP P PP P L LSS PA
Sbjct: 2219 PLPPTISPTAPTSWTLPPGPLLGVLPVVGVVRPAP-PPPPPPLTLVLSSGPA 2269
Score = 31.2 bits (69), Expect = 1.9
Identities = 29/75 (38%), Positives = 37/75 (49%), Gaps = 12/75 (16%)
Query: 109 GTEGNGPGLGPQEE--PPAPLTSQPERSSSQRARGKTPSSPTLSPSRGSPLLLREPSLVT 166
G G+G G GP+EE PPAP P + SQ ++G T S P+R L P +
Sbjct: 2122 GGPGDG-GAGPREESLPPAP----PLANGSQPSQGLTAS--PADPTRTFAWLPGAPGVRV 2174
Query: 167 DSLEAHRPCPCPPQP 181
SL P P PP+P
Sbjct: 2175 LSL---GPAPEPPKP 2186
Score = 29.3 bits (64), Expect = 7.1
Identities = 49/196 (25%), Positives = 68/196 (34%), Gaps = 50/196 (25%)
Query: 15 HLPAVRTQLGGGAFHNEGPEFRGCVLSPPFPKPRHWLSCTCGGEHENKELPLHQSTGRLL 74
H PA ++ GG E P VL P P+ RH +N + PL +G
Sbjct: 1806 HSPAPSSEPPGG----EDPPLDTDVLVPGAPE-RH-------SPIQNLDPPLRPDSGSAP 1853
Query: 75 SCLPTRRGHSRSALQKNRLHCPTEGPTNQTPYIKGTEGNGPGLGPQEEPPAPLT------ 128
P R S + R+ P P+ + G GP P +P +
Sbjct: 1854 P--PAPRSFSGA-----RIKVPNYSPSRRPL-------GGVSFGPLPSPGSPSSLTHHIP 1899
Query: 129 --SQPE-RSSSQRARGKTPSSPTLSPSR-GSPLLLREPSL--------------VTDSLE 170
P+ + +R+R +P +P PSR SP L P L + L
Sbjct: 1900 TVGDPDFPAPPRRSRRPSPLAPRPPPSRWASPPLKTSPQLRVPPPTSVVTALTPTSGELA 1959
Query: 171 AHRPCPCPPQPNQLAP 186
P P PP P L P
Sbjct: 1960 PPGPAPSPPPPEDLGP 1975
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 37.4 bits (85), Expect = 0.026
Identities = 39/139 (28%), Positives = 54/139 (38%), Gaps = 16/139 (11%)
Query: 75 SCLPTRRGHSRSALQK--NRLHCPTEGPTNQTPYIKGTEGNGPGLGPQEEPPAPLTSQPE 132
S LP R SA Q+ ++ PT+G Q+ + G GPG P PPA + Q +
Sbjct: 502 SPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAG----GPGAPPAARPPASPSPQRQ 557
Query: 133 RSSSQRARGKTPSSPTLSPSRGSPLLLREPSLVTDSLEAHRPCPCPPQPNQLAPQLSSAP 192
Q R + S P + G+P P +P P P P + A Q P
Sbjct: 558 AGPPQATRQTSVSGPAPPKASGAP-----PGGQQRQGPPQKP-PGPAGPTRQASQAGPVP 611
Query: 193 AQLVWAETHSLALPRPNGP 211
+ PRP+GP
Sbjct: 612 R----TGPPTTQQPRPSGP 626
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 37.4 bits (85), Expect = 0.026
Identities = 39/139 (28%), Positives = 54/139 (38%), Gaps = 16/139 (11%)
Query: 75 SCLPTRRGHSRSALQK--NRLHCPTEGPTNQTPYIKGTEGNGPGLGPQEEPPAPLTSQPE 132
S LP R SA Q+ ++ PT+G Q+ + G GPG P PPA + Q +
Sbjct: 502 SPLPQRLPSPTSAPQQPASQAAPPTQGQGRQSRPVAG----GPGAPPAARPPASPSPQRQ 557
Query: 133 RSSSQRARGKTPSSPTLSPSRGSPLLLREPSLVTDSLEAHRPCPCPPQPNQLAPQLSSAP 192
Q R + S P + G+P P +P P P P + A Q P
Sbjct: 558 AGPPQATRQTSVSGPAPPKASGAP-----PGGQQRQGPPQKP-PGPAGPTRQASQAGPVP 611
Query: 193 AQLVWAETHSLALPRPNGP 211
+ PRP+GP
Sbjct: 612 R----TGPPTTQQPRPSGP 626
>gi|148236531 hypothetical protein LOC339779 [Homo sapiens]
Length = 412
Score = 37.4 bits (85), Expect = 0.026
Identities = 41/128 (32%), Positives = 53/128 (41%), Gaps = 31/128 (24%)
Query: 64 LPLHQSTGRLLSCLPTRRGHSRSALQKNRLHCPTEGPTNQTPYIKGTEGNGPGLGPQEEP 123
L L Q R L LP +R P P K T+ G L P +P
Sbjct: 300 LRLPQGQARALHLLPEKR------------------PKEAGPQGKATQACGHQL-PASQP 340
Query: 124 PA------PLTSQPERSSSQRARG-KTPSSPTLSPSRGSPLLLREPSLVTDSLEAHRPCP 176
PA P+ P ++ S R+ G ++P+SP G P R P VT SL+ RPCP
Sbjct: 341 PAAQARADPVPGTPSQTRSFRSAGLQSPNSPRC--FSGPP--PRAPKQVTTSLKP-RPCP 395
Query: 177 CPPQPNQL 184
P +P L
Sbjct: 396 GPKRPVSL 403
Score = 29.3 bits (64), Expect = 7.1
Identities = 22/71 (30%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 123 PPAPLTSQPERSSSQRARGKTPSSPTLSPSRGSPLLLR-EPSLVTDSLEAHRPCPCPPQP 181
P +P S R R +PS+ L PS PL PS +S H PC P P
Sbjct: 92 PSSPTFFHQNYLSLPRPRASSPSNHWLYPS--PPLTPSFSPSQPQNSSLPHSPCQSPSHP 149
Query: 182 NQLAPQLSSAP 192
+L ++P
Sbjct: 150 EELHSSTLTSP 160
>gi|226437579 NAC alpha domain containing [Homo sapiens]
Length = 1562
Score = 37.0 bits (84), Expect = 0.034
Identities = 65/262 (24%), Positives = 101/262 (38%), Gaps = 42/262 (16%)
Query: 114 GPGLGPQ---EEPPAPLTSQPERSSSQRARGKTPSSPTLSPSRGSPLLLREPSLVTDSLE 170
G LGP+ EE A L + PE ++ + + P + G+P +E + T +E
Sbjct: 970 GEALGPRPAPEEKNAALPTVPEPAALDQVQQDDPQP---AAEAGTPWAAQEDADSTLGME 1026
Query: 171 A-HRPCPCPPQPNQLAPQLSSAPAQL-VWAETHSLALPRPNGPESLTWVIFRKSKDGRVH 228
A P P ++A LS + + A H+ +P+ P+ T + + + G
Sbjct: 1027 ALSLPEPASGAGEEIAEALSRPGREACLEARAHTGDGAKPDSPQKETLEVENQQEGGLKP 1086
Query: 229 LASSSRLRLRRLLFPLSTQGCERHRSSPRRPPSAGVDVGLLLAQGRGVPAPASRSCERDG 288
LA P S G R P PP+A +V +Q R + +PA
Sbjct: 1087 LAQEHG--------PRSALGGARE--VPDAPPAACPEV----SQAR-LLSPAREE----- 1126
Query: 289 RRLVEGKQDSAEHQSGPEPALPSLLSTKPPLAEDGRGVAGEVGPVDHTALLGRTAPGLPC 348
R + GK S PEP LPS ++T+ L G V +D R P P
Sbjct: 1127 -RGLSGK-------STPEPTLPSAVATEASLDSCPESSVGAVSSLD------RGCPDAPA 1172
Query: 349 RVALPPLSHRLLETGVQTLELP 370
+ P G+ ++E P
Sbjct: 1173 PTSAPTSQQPEPVLGLGSVEQP 1194
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.134 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,694,893
Number of Sequences: 37866
Number of extensions: 1436975
Number of successful extensions: 6771
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 553
Number of HSP's that attempted gapping in prelim test: 5740
Number of HSP's gapped (non-prelim): 1494
length of query: 424
length of database: 18,247,518
effective HSP length: 105
effective length of query: 319
effective length of database: 14,271,588
effective search space: 4552636572
effective search space used: 4552636572
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.