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Search of human proteins with 239742130
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239742130 PREDICTED: hypothetical protein XP_002342439 [Homo
sapiens]
(218 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239742130 PREDICTED: hypothetical protein XP_002342439 [Homo ... 451 e-127
gi|239753746 PREDICTED: similar to BCL2-like 12 [Homo sapiens] 444 e-125
gi|239748229 PREDICTED: hypothetical protein XP_002346597 [Homo ... 444 e-125
gi|20336330 BCL2-like 12 isoform 1 [Homo sapiens] 343 5e-95
gi|100913021 BCL2-like 12 isoform 3 [Homo sapiens] 337 5e-93
gi|21361937 proline rich 7 (synaptic) [Homo sapiens] 38 0.006
gi|238908524 hypothetical protein LOC389333 [Homo sapiens] 37 0.017
gi|95147555 microtubule-associated protein 1A [Homo sapiens] 35 0.049
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 35 0.065
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 35 0.065
gi|149393138 hypothetical protein LOC84067 isoform 2 [Homo sapiens] 34 0.084
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 34 0.11
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 33 0.14
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 33 0.14
gi|4503293 DEAH (Asp-Glu-Ala-His) box polypeptide 16 [Homo sapiens] 33 0.14
gi|61966703 NHS-like 2 [Homo sapiens] 33 0.14
gi|239757360 PREDICTED: hypothetical protein [Homo sapiens] 33 0.19
gi|56118234 proline rich 6 [Homo sapiens] 33 0.19
gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens] 33 0.25
gi|26051258 RAS guanyl releasing protein 4 isoform a [Homo sapiens] 32 0.32
gi|226246586 RAS guanyl releasing protein 4 isoform g [Homo sapi... 32 0.32
gi|226246584 RAS guanyl releasing protein 4 isoform f [Homo sapi... 32 0.32
gi|226246581 RAS guanyl releasing protein 4 isoform e [Homo sapi... 32 0.32
gi|226246579 RAS guanyl releasing protein 4 isoform d [Homo sapi... 32 0.32
gi|226246577 RAS guanyl releasing protein 4 isoform c [Homo sapi... 32 0.32
gi|226246575 RAS guanyl releasing protein 4 isoform b [Homo sapi... 32 0.32
gi|239750958 PREDICTED: hypothetical protein XP_002347630 [Homo ... 32 0.32
gi|239745364 PREDICTED: hypothetical protein XP_002343480 [Homo ... 32 0.32
gi|239749293 PREDICTED: hypothetical protein XP_002346984 [Homo ... 32 0.42
gi|239743383 PREDICTED: hypothetical protein XP_002342846 [Homo ... 32 0.42
>gi|239742130 PREDICTED: hypothetical protein XP_002342439 [Homo
sapiens]
Length = 218
Score = 451 bits (1161), Expect = e-127
Identities = 218/218 (100%), Positives = 218/218 (100%)
Query: 1 MMTVGVEWRRWQVERRRWQWGPRSGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPN 60
MMTVGVEWRRWQVERRRWQWGPRSGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPN
Sbjct: 1 MMTVGVEWRRWQVERRRWQWGPRSGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPN 60
Query: 61 PPRSHAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPWSLPIRPCYGSEPGPATPDFYAL 120
PPRSHAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPWSLPIRPCYGSEPGPATPDFYAL
Sbjct: 61 PPRSHAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPWSLPIRPCYGSEPGPATPDFYAL 120
Query: 121 VAQRLEQQEQLKSPPSKRISLASGFFARLVELFCSREDSSRPSRACPGPPPPSQEPLALA 180
VAQRLEQQEQLKSPPSKRISLASGFFARLVELFCSREDSSRPSRACPGPPPPSQEPLALA
Sbjct: 121 VAQRLEQQEQLKSPPSKRISLASGFFARLVELFCSREDSSRPSRACPGPPPPSQEPLALA 180
Query: 181 MELSRRVAELGDTRAGLSVEHAHSLTPWIQAHGGRVSR 218
MELSRRVAELGDTRAGLSVEHAHSLTPWIQAHGGRVSR
Sbjct: 181 MELSRRVAELGDTRAGLSVEHAHSLTPWIQAHGGRVSR 218
>gi|239753746 PREDICTED: similar to BCL2-like 12 [Homo sapiens]
Length = 218
Score = 444 bits (1143), Expect = e-125
Identities = 216/218 (99%), Positives = 216/218 (99%)
Query: 1 MMTVGVEWRRWQVERRRWQWGPRSGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPN 60
MMTVGVEWRRWQVERRRWQWGPRSGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPN
Sbjct: 1 MMTVGVEWRRWQVERRRWQWGPRSGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPN 60
Query: 61 PPRSHAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPWSLPIRPCYGSEPGPATPDFYAL 120
PPRS AQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPWSLPIRPCYGSEPGPATPDFYAL
Sbjct: 61 PPRSPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPWSLPIRPCYGSEPGPATPDFYAL 120
Query: 121 VAQRLEQQEQLKSPPSKRISLASGFFARLVELFCSREDSSRPSRACPGPPPPSQEPLALA 180
VAQRLEQQEQLKSPPSKRISLASGFFARLVELFCSREDSSRPSRACPG PPPSQEPLALA
Sbjct: 121 VAQRLEQQEQLKSPPSKRISLASGFFARLVELFCSREDSSRPSRACPGSPPPSQEPLALA 180
Query: 181 MELSRRVAELGDTRAGLSVEHAHSLTPWIQAHGGRVSR 218
MELSRRVAELGDTRAGLSVEHAHSLTPWIQAHGGRVSR
Sbjct: 181 MELSRRVAELGDTRAGLSVEHAHSLTPWIQAHGGRVSR 218
>gi|239748229 PREDICTED: hypothetical protein XP_002346597 [Homo
sapiens]
Length = 218
Score = 444 bits (1143), Expect = e-125
Identities = 216/218 (99%), Positives = 216/218 (99%)
Query: 1 MMTVGVEWRRWQVERRRWQWGPRSGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPN 60
MMTVGVEWRRWQVERRRWQWGPRSGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPN
Sbjct: 1 MMTVGVEWRRWQVERRRWQWGPRSGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPN 60
Query: 61 PPRSHAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPWSLPIRPCYGSEPGPATPDFYAL 120
PPRS AQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPWSLPIRPCYGSEPGPATPDFYAL
Sbjct: 61 PPRSPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPWSLPIRPCYGSEPGPATPDFYAL 120
Query: 121 VAQRLEQQEQLKSPPSKRISLASGFFARLVELFCSREDSSRPSRACPGPPPPSQEPLALA 180
VAQRLEQQEQLKSPPSKRISLASGFFARLVELFCSREDSSRPSRACPG PPPSQEPLALA
Sbjct: 121 VAQRLEQQEQLKSPPSKRISLASGFFARLVELFCSREDSSRPSRACPGSPPPSQEPLALA 180
Query: 181 MELSRRVAELGDTRAGLSVEHAHSLTPWIQAHGGRVSR 218
MELSRRVAELGDTRAGLSVEHAHSLTPWIQAHGGRVSR
Sbjct: 181 MELSRRVAELGDTRAGLSVEHAHSLTPWIQAHGGRVSR 218
>gi|20336330 BCL2-like 12 isoform 1 [Homo sapiens]
Length = 334
Score = 343 bits (881), Expect = 5e-95
Identities = 186/257 (72%), Positives = 191/257 (74%), Gaps = 46/257 (17%)
Query: 4 VGVEWRRWQVERRRWQWGPRSGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPNPPR 63
V V+WRR QVE RR +WGP GASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVP PPR
Sbjct: 61 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPR 120
Query: 64 SHAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPWSLPIRPCYGSEPGPATPDFYALVAQ 123
S AQEEPTDFLSRLRRCLPCSLGRGAAPSESPRP SLPIRPCYG EPGPATPDFYALVAQ
Sbjct: 121 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ 180
Query: 124 RLEQ--QEQLKSPP-----------------------------------------SKRIS 140
RLEQ QEQLKSPP SK +
Sbjct: 181 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVR 240
Query: 141 LASGFFARLVELFCSREDSSRPSRACPGPPPPSQEP---LALAMELSRRVAELGDTRAGL 197
L+S FARLVELFCSR+DSSRPSRACPGPPPPS EP LALAMELSRRVA LG T AGL
Sbjct: 241 LSSDSFARLVELFCSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGGTLAGL 300
Query: 198 SVEHAHSLTPWIQAHGG 214
SVEH HS TPWIQAHGG
Sbjct: 301 SVEHVHSFTPWIQAHGG 317
>gi|100913021 BCL2-like 12 isoform 3 [Homo sapiens]
Length = 333
Score = 337 bits (864), Expect = 5e-93
Identities = 185/257 (71%), Positives = 190/257 (73%), Gaps = 47/257 (18%)
Query: 4 VGVEWRRWQVERRRWQWGPRSGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPNPPR 63
V V+WRR QVE RR +WGP GASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVP PP
Sbjct: 61 VRVQWRRPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPP- 119
Query: 64 SHAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPWSLPIRPCYGSEPGPATPDFYALVAQ 123
S AQEEPTDFLSRLRRCLPCSLGRGAAPSESPRP SLPIRPCYG EPGPATPDFYALVAQ
Sbjct: 120 SPAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPCSLPIRPCYGLEPGPATPDFYALVAQ 179
Query: 124 RLEQ--QEQLKSPP-----------------------------------------SKRIS 140
RLEQ QEQLKSPP SK +
Sbjct: 180 RLEQLVQEQLKSPPSPELQGPPSTEKEAILRRLVALLEEEAEVINQKLASDPALRSKLVR 239
Query: 141 LASGFFARLVELFCSREDSSRPSRACPGPPPPSQEP---LALAMELSRRVAELGDTRAGL 197
L+S FARLVELFCSR+DSSRPSRACPGPPPPS EP LALAMELSRRVA LG T AGL
Sbjct: 240 LSSDSFARLVELFCSRDDSSRPSRACPGPPPPSPEPLARLALAMELSRRVAGLGGTLAGL 299
Query: 198 SVEHAHSLTPWIQAHGG 214
SVEH HS TPWIQAHGG
Sbjct: 300 SVEHVHSFTPWIQAHGG 316
>gi|21361937 proline rich 7 (synaptic) [Homo sapiens]
Length = 274
Score = 38.1 bits (87), Expect = 0.006
Identities = 50/180 (27%), Positives = 66/180 (36%), Gaps = 47/180 (26%)
Query: 32 EELGLREDTLRVLAA--FLRRGEAAGSPV----PNPPR--------SHAQEEPTDFLSRL 77
+E LRE LR L G AGSP P PP +HA P + L
Sbjct: 42 QEERLREQNLRALELEPLELEGSLAGSPPGLAPPQPPPHRSRLEAPAHAHSHPHVHVHPL 101
Query: 78 RRCLPCSLGRGAAP---------------SESPRPWSLPIRPCYGSEPGPATPDFYALVA 122
P A P S PRPWS P + +E + P Y
Sbjct: 102 LHHGPAQPHAHAHPHPHHHALPHPPPTHLSVPPRPWSYPRQ----AESDMSKPPCY---- 153
Query: 123 QRLEQQEQLKSPP---SKRISLASGFFARLVELFCSREDSSRPSRACPGPPPPSQEPLAL 179
E+ + PP S+ ++ G + ++V F SR DS+ PPPS +PL L
Sbjct: 154 ---EEAVLMAEPPPPYSEVLTDTRGLYRKIVTPFLSRRDSAEKQE----QPPPSYKPLFL 206
>gi|238908524 hypothetical protein LOC389333 [Homo sapiens]
Length = 1015
Score = 36.6 bits (83), Expect = 0.017
Identities = 35/135 (25%), Positives = 56/135 (41%), Gaps = 19/135 (14%)
Query: 55 GSPVPNPPRSHAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPW-SLPIR------PCYG 107
GS + P + T + + P + +AP+++PRPW SL R P G
Sbjct: 272 GSTGRSEPETRETARSTHVVLEKAKSRPLRVRDNSAPAKAPRPWPSLRERAIRRDKPAPG 331
Query: 108 SEP-GPATPDFYALVAQRLEQQEQLKSP---PSKRISLASGFFARLVELFCSREDSSRPS 163
+EP GP + + +++++ + + P P + + A F R S PS
Sbjct: 332 TEPLGPVSSSIFLQSEEKIQEARKTRFPREAPDRTVQRARS------PPFECRIPSEVPS 385
Query: 164 RAC--PGPPPPSQEP 176
RA P PP Q P
Sbjct: 386 RAVRPRSPSPPRQTP 400
>gi|95147555 microtubule-associated protein 1A [Homo sapiens]
Length = 2803
Score = 35.0 bits (79), Expect = 0.049
Identities = 29/107 (27%), Positives = 39/107 (36%), Gaps = 22/107 (20%)
Query: 81 LPCSLGRGAAPSESPRPWSLPIRPCYGSEPGPATPDFYALVAQRLEQQEQLKSPPSKRIS 140
LPC L A +E P P+ +P C + P +P+ + E +E P +R +
Sbjct: 2333 LPCHLECSEAATEKPSPFQVPSEDCAANGPTETSPNPPGPAPAKAENEEAAACPAWERGA 2392
Query: 141 LASGFFARLVELFCSREDSSRPSR-------ACP----GPPPPSQEP 176
G E SSRP CP G PP S P
Sbjct: 2393 WPEG-----------AERSSRPDTLLSPEQPVCPAGGSGGPPSSASP 2428
>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
Length = 1682
Score = 34.7 bits (78), Expect = 0.065
Identities = 40/138 (28%), Positives = 51/138 (36%), Gaps = 20/138 (14%)
Query: 57 PVPNPPRSHAQEEPTDFLSRLRRCLP----CSLGRGAAPSESPRPWSLPIRPCYGSEPGP 112
P P PP S P L L L C G GAA S P P LP P
Sbjct: 792 PPPPPPPS-----PASLLKSLASVLEGQKYCYRGTGAAVSTRPGP--LPTTQYSPGPPSG 844
Query: 113 ATPDFYALVAQRLEQQEQLKSPPSKRISLASGFFARLVELFCSREDSSRPSRACPGPPPP 172
AT A + Q + S + S + G +AR R P PGP P
Sbjct: 845 ATALPPTSAAPSAQGSPQPSASSSSQFSTSGGPWAR------ERRAGEEP---VPGPMTP 895
Query: 173 SQEPLALAMELSRRVAEL 190
+Q P L++ +R +E+
Sbjct: 896 TQPPPPLSLPPARSESEV 913
>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
Length = 1003
Score = 34.7 bits (78), Expect = 0.065
Identities = 35/123 (28%), Positives = 45/123 (36%), Gaps = 6/123 (4%)
Query: 53 AAGSPVPNPPRSHAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPWSLPI--RPCYGSEP 110
A+ SP +PP H + T LP G + P S LP+ P G+
Sbjct: 250 ASSSPPSDPPLFHCSDALTPPPLPPSNNLPAHPGPASQPPVSSATMHLPLVLGPLGGAPT 309
Query: 111 --GPATPDFYALVAQRLEQQEQLKSPPSKRISLASGFFARLVELFCSREDSSRPSRACPG 168
GP P F L + L + + PP S G R S S RPS+ P
Sbjct: 310 VEGPGAPPF--LASSLLSAAAKAQHPPLPPPSTLQGRRPRAQAPSASHSSSLRPSQRRPR 367
Query: 169 PPP 171
PP
Sbjct: 368 RPP 370
>gi|149393138 hypothetical protein LOC84067 isoform 2 [Homo sapiens]
Length = 972
Score = 34.3 bits (77), Expect = 0.084
Identities = 30/98 (30%), Positives = 35/98 (35%), Gaps = 24/98 (24%)
Query: 14 ERRRWQWGPRSGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPNPPRSHAQEEPTDF 73
E W GP S + + S R T LA FLR+ GS P P
Sbjct: 472 EHASWARGPGSPSVDSSSVTTVPRPSTPSRLALFLRQQSLGGSESPGP------------ 519
Query: 74 LSRLRRCLPCSLGRGAAPSESPRPWSLPIRPCYGSEPG 111
PCS G A+P+ SP RP EPG
Sbjct: 520 -------APCSPGLSASPASSPGR-----RPTPAEEPG 545
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 33.9 bits (76), Expect = 0.11
Identities = 40/180 (22%), Positives = 58/180 (32%), Gaps = 24/180 (13%)
Query: 9 RRWQVERRRWQWGPRSGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPNPPRSHAQE 68
+R Q R+ Q SG+S + +E R RR + S P+P + +
Sbjct: 481 QRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKET 540
Query: 69 EPTDFLSRLRRCLPCSLGRGAAPSESPRPWSLPIRPCYGSEPGPATPDFYALVAQRLEQQ 128
P R P R +P+ PR P P P P +R
Sbjct: 541 SPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPP--------PRRRSPS 592
Query: 129 EQLKSPPSKRISLASGFFARLVELFCSREDSSRPSRACPGPPPPSQEPLALAMELSRRVA 188
+ SPP +R S P R PPPP + + + RRV+
Sbjct: 593 PRRYSPPIQR----------------RYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVS 636
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 33.5 bits (75), Expect = 0.14
Identities = 33/120 (27%), Positives = 46/120 (38%), Gaps = 24/120 (20%)
Query: 57 PVPNPPRSHAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPWSLPIRPCYGSEPGPATPD 116
PV N P H + P + +P S R +A S++P P P RP P P P
Sbjct: 270 PVGNRPSIHREAVPPPPPQNNKPPVP-STPRPSASSQAPPPPPPPSRP----GPPPLPPS 324
Query: 117 FYALVAQRLEQQEQLKSPPSKRISLASGFFARLVELFCSREDSSRPSRACPGPPPPSQEP 176
++ P + +SL+S S P R+ P PPPPS+ P
Sbjct: 325 SSG--------NDETPRLPQRNLSLSS-----------STPPLPSPGRSGPLPPPPSERP 365
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 33.5 bits (75), Expect = 0.14
Identities = 33/120 (27%), Positives = 46/120 (38%), Gaps = 24/120 (20%)
Query: 57 PVPNPPRSHAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPWSLPIRPCYGSEPGPATPD 116
PV N P H + P + +P S R +A S++P P P RP P P P
Sbjct: 270 PVGNRPSIHREAVPPPPPQNNKPPVP-STPRPSASSQAPPPPPPPSRP----GPPPLPPS 324
Query: 117 FYALVAQRLEQQEQLKSPPSKRISLASGFFARLVELFCSREDSSRPSRACPGPPPPSQEP 176
++ P + +SL+S S P R+ P PPPPS+ P
Sbjct: 325 SSG--------NDETPRLPQRNLSLSS-----------STPPLPSPGRSGPLPPPPSERP 365
>gi|4503293 DEAH (Asp-Glu-Ala-His) box polypeptide 16 [Homo sapiens]
Length = 1041
Score = 33.5 bits (75), Expect = 0.14
Identities = 23/81 (28%), Positives = 36/81 (44%), Gaps = 6/81 (7%)
Query: 5 GVEWRRWQVER---RRWQWGPRSGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPNP 61
G E RRW+ R ++G R AS +L L E+ F+R + G P+
Sbjct: 323 GEEQRRWEEARLGAASLKFGARDAASQEPKYQLVLEEEET---IEFVRATQLQGDEEPSA 379
Query: 62 PRSHAQEEPTDFLSRLRRCLP 82
P + Q + + + +RR LP
Sbjct: 380 PPTSTQAQQKESIQAVRRSLP 400
>gi|61966703 NHS-like 2 [Homo sapiens]
Length = 709
Score = 33.5 bits (75), Expect = 0.14
Identities = 34/133 (25%), Positives = 50/133 (37%), Gaps = 18/133 (13%)
Query: 61 PPRS---HAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPWSLPIRPCYGSEPGPATPDF 117
PPRS HA+ P D + +R+ P S G +P ES P SL P S D
Sbjct: 539 PPRSSIQHARPLPQDSYTVVRKPKPSSFPDGRSPGESTAPSSLVFTPFASSS------DA 592
Query: 118 YALVAQRLEQQEQLKSPPSKRISLASGFFARLVELFCSREDSSRPSRACPGPPPPSQEPL 177
+ Q+ Q P R+ L E + + PPP ++P
Sbjct: 593 FFSGTQQPPQGSVEDEGPKVRV---------LPERISLQSQEEAEKKKGKIPPPVPKKPS 643
Query: 178 ALAMELSRRVAEL 190
L + L+ A++
Sbjct: 644 VLYLPLTSPTAQM 656
>gi|239757360 PREDICTED: hypothetical protein [Homo sapiens]
Length = 535
Score = 33.1 bits (74), Expect = 0.19
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 13 VERRRWQWGPRSG-------ASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPNPPRSH 65
V R +WG G A + ++ L L + LR L AFL RGE + +P PR H
Sbjct: 344 VHAPRGRWGAVGGGEKGERLARVTATQHLMLGDLFLRSLPAFLLRGEPLRA-LPRRPRLH 402
Query: 66 AQEEPTDFLSRLRRCLPCSLGRGAAP 91
Q PT L+ + C R +AP
Sbjct: 403 PQGRPT-ALAPPSLSICCRNERASAP 427
>gi|56118234 proline rich 6 [Homo sapiens]
Length = 272
Score = 33.1 bits (74), Expect = 0.19
Identities = 40/133 (30%), Positives = 53/133 (39%), Gaps = 14/133 (10%)
Query: 23 RSGASMA--GSEELGLREDTLRVLAAFLRRGEAAGSPVPNPPRSHAQEEPTDFLSRLRRC 80
RSGAS A S L R R AGS +S A E+P RLRR
Sbjct: 17 RSGASAAPAASAAAALAPSATRTR----RSASQAGS------KSQAVEKPPSEKPRLRRS 66
Query: 81 LPCSLGRGAAPSESPRPWSLPIRPCYGSEPGPATPDFYALVAQRLEQQEQLKSPPSKRIS 140
P + G P E P P + P P PATP A EQ+E+ ++ ++
Sbjct: 67 SPRAQEEG--PGEPPPPELALLPPPPPPPPTPATPTSSASNLDLGEQRERWETFQKRQKL 124
Query: 141 LASGFFARLVELF 153
+ G L++ F
Sbjct: 125 TSEGAAKLLLDTF 137
>gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens]
Length = 1243
Score = 32.7 bits (73), Expect = 0.25
Identities = 43/148 (29%), Positives = 52/148 (35%), Gaps = 28/148 (18%)
Query: 54 AGSPVPNPPRSHAQE-----EPTDFLSRLRRCLPCSLGRGAAPSESPRPWSLPIRPCYGS 108
AG P PP A+ EP SRL R LG ++ WSLP P
Sbjct: 31 AGQPRLGPPPRRARRFSGKAEPRPRSSRLSRRSSVDLGLLSS-------WSLPASPA--- 80
Query: 109 EPGPATPDFYALVAQRLEQQEQLKSPPSKRISLASGFFARLVELFCSREDSSRP----SR 164
P P P A K PP + + A EDS+RP S
Sbjct: 81 -PDPPDPPDSAGPGPARSPPPSSKEPPEGTWTEGAPVKA--------AEDSARPELPDSA 131
Query: 165 ACPGPPPPSQEPLALAMELSRRVAELGD 192
PG P + P A+A+E R E D
Sbjct: 132 VGPGSREPLRVPEAVALERRREQEEKED 159
>gi|26051258 RAS guanyl releasing protein 4 isoform a [Homo sapiens]
Length = 673
Score = 32.3 bits (72), Expect = 0.32
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
Query: 50 RGEAA--GSPVPNPPRSHA---QEEPTDFLSRLRRCLPCSLGRGAAPSESPRP-WSLPIR 103
+G+A G+PVP+ P HA EE + L C L +ESP P W
Sbjct: 597 KGDAGPPGAPVPSTPAPHASCGSEENHSYTLSLEPETGCQLRHAWTQTESPHPSWETDTV 656
Query: 104 PCYGSEPGPAT 114
PC +P P+T
Sbjct: 657 PCPVMDP-PST 666
>gi|226246586 RAS guanyl releasing protein 4 isoform g [Homo
sapiens]
Length = 576
Score = 32.3 bits (72), Expect = 0.32
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
Query: 50 RGEAA--GSPVPNPPRSHA---QEEPTDFLSRLRRCLPCSLGRGAAPSESPRP-WSLPIR 103
+G+A G+PVP+ P HA EE + L C L +ESP P W
Sbjct: 500 KGDAGPPGAPVPSTPAPHASCGSEENHSYTLSLEPETGCQLRHAWTQTESPHPSWETDTV 559
Query: 104 PCYGSEPGPAT 114
PC +P P+T
Sbjct: 560 PCPVMDP-PST 569
>gi|226246584 RAS guanyl releasing protein 4 isoform f [Homo
sapiens]
Length = 484
Score = 32.3 bits (72), Expect = 0.32
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
Query: 50 RGEAA--GSPVPNPPRSHA---QEEPTDFLSRLRRCLPCSLGRGAAPSESPRP-WSLPIR 103
+G+A G+PVP+ P HA EE + L C L +ESP P W
Sbjct: 408 KGDAGPPGAPVPSTPAPHASCGSEENHSYTLSLEPETGCQLRHAWTQTESPHPSWETDTV 467
Query: 104 PCYGSEPGPAT 114
PC +P P+T
Sbjct: 468 PCPVMDP-PST 477
>gi|226246581 RAS guanyl releasing protein 4 isoform e [Homo
sapiens]
Length = 639
Score = 32.3 bits (72), Expect = 0.32
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
Query: 50 RGEAA--GSPVPNPPRSHA---QEEPTDFLSRLRRCLPCSLGRGAAPSESPRP-WSLPIR 103
+G+A G+PVP+ P HA EE + L C L +ESP P W
Sbjct: 563 KGDAGPPGAPVPSTPAPHASCGSEENHSYTLSLEPETGCQLRHAWTQTESPHPSWETDTV 622
Query: 104 PCYGSEPGPAT 114
PC +P P+T
Sbjct: 623 PCPVMDP-PST 632
>gi|226246579 RAS guanyl releasing protein 4 isoform d [Homo
sapiens]
Length = 604
Score = 32.3 bits (72), Expect = 0.32
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
Query: 50 RGEAA--GSPVPNPPRSHA---QEEPTDFLSRLRRCLPCSLGRGAAPSESPRP-WSLPIR 103
+G+A G+PVP+ P HA EE + L C L +ESP P W
Sbjct: 528 KGDAGPPGAPVPSTPAPHASCGSEENHSYTLSLEPETGCQLRHAWTQTESPHPSWETDTV 587
Query: 104 PCYGSEPGPAT 114
PC +P P+T
Sbjct: 588 PCPVMDP-PST 597
>gi|226246577 RAS guanyl releasing protein 4 isoform c [Homo
sapiens]
Length = 581
Score = 32.3 bits (72), Expect = 0.32
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
Query: 50 RGEAA--GSPVPNPPRSHA---QEEPTDFLSRLRRCLPCSLGRGAAPSESPRP-WSLPIR 103
+G+A G+PVP+ P HA EE + L C L +ESP P W
Sbjct: 505 KGDAGPPGAPVPSTPAPHASCGSEENHSYTLSLEPETGCQLRHAWTQTESPHPSWETDTV 564
Query: 104 PCYGSEPGPAT 114
PC +P P+T
Sbjct: 565 PCPVMDP-PST 574
>gi|226246575 RAS guanyl releasing protein 4 isoform b [Homo
sapiens]
Length = 659
Score = 32.3 bits (72), Expect = 0.32
Identities = 24/71 (33%), Positives = 32/71 (45%), Gaps = 7/71 (9%)
Query: 50 RGEAA--GSPVPNPPRSHA---QEEPTDFLSRLRRCLPCSLGRGAAPSESPRP-WSLPIR 103
+G+A G+PVP+ P HA EE + L C L +ESP P W
Sbjct: 583 KGDAGPPGAPVPSTPAPHASCGSEENHSYTLSLEPETGCQLRHAWTQTESPHPSWETDTV 642
Query: 104 PCYGSEPGPAT 114
PC +P P+T
Sbjct: 643 PCPVMDP-PST 652
>gi|239750958 PREDICTED: hypothetical protein XP_002347630 [Homo
sapiens]
Length = 229
Score = 32.3 bits (72), Expect = 0.32
Identities = 39/132 (29%), Positives = 55/132 (41%), Gaps = 27/132 (20%)
Query: 55 GSPVPNPPRSHAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPWSLPIRPCYGSEPGPAT 114
G+P P P + AQ RL R GA+P SPR RP P PAT
Sbjct: 13 GTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRS-----RPEGPGPPRPAT 67
Query: 115 PDFYALVAQRLEQQEQ-LKSPPSKRISLASGFFARLVELFCSREDS--------SRPSRA 165
P A+R + + + P++R +R ++L R+ + +R RA
Sbjct: 68 PS-----ARRPQGLSAGVSAGPAQR--------SRPLQLAGPRDRAPARALHARTRMGRA 114
Query: 166 CPGPPPPSQEPL 177
GPP PS+ PL
Sbjct: 115 ARGPPAPSRGPL 126
>gi|239745364 PREDICTED: hypothetical protein XP_002343480 [Homo
sapiens]
Length = 229
Score = 32.3 bits (72), Expect = 0.32
Identities = 39/132 (29%), Positives = 55/132 (41%), Gaps = 27/132 (20%)
Query: 55 GSPVPNPPRSHAQEEPTDFLSRLRRCLPCSLGRGAAPSESPRPWSLPIRPCYGSEPGPAT 114
G+P P P + AQ RL R GA+P SPR RP P PAT
Sbjct: 13 GTPRPLPASAGAQGSQARSGLRLCRTTQGRPAGGASPPPSPRS-----RPEGPGPPRPAT 67
Query: 115 PDFYALVAQRLEQQEQ-LKSPPSKRISLASGFFARLVELFCSREDS--------SRPSRA 165
P A+R + + + P++R +R ++L R+ + +R RA
Sbjct: 68 PS-----ARRPQGLSAGVSAGPAQR--------SRPLQLAGPRDRAPARALHARTRMGRA 114
Query: 166 CPGPPPPSQEPL 177
GPP PS+ PL
Sbjct: 115 ARGPPAPSRGPL 126
>gi|239749293 PREDICTED: hypothetical protein XP_002346984 [Homo
sapiens]
Length = 585
Score = 32.0 bits (71), Expect = 0.42
Identities = 50/199 (25%), Positives = 68/199 (34%), Gaps = 37/199 (18%)
Query: 53 AAGSPVPNP-PRSHAQEEPTDFLSRLR---RCLPCSLGRGAAPSESPRPWSLPIRP---- 104
+ GSP P P S A R R PC+ G + PRPW +RP
Sbjct: 319 SVGSPCPAAEPVSQAGPPSPGHAGRPRGPEAARPCARGPPSQEPGPPRPWPCALRPRPRL 378
Query: 105 --------------------CYGSEPGPATP-----DFYALVAQRLEQQEQLKSPPSKRI 139
CY PG P + ++ +RL + QL P
Sbjct: 379 RAALPSRRLFSRGAAQQLPCCYKLHPGRHVPLRPFKEKHSEARRRLPEPRQLHLQPVGAN 438
Query: 140 SLASGFFARLVELFCSREDSSRPSRACPGPPPPSQEPLALAMELSRRVAELGDT--RAGL 197
S+ AR + R +RA P PP Q+P A + S A G+ RAG
Sbjct: 439 SVERA--ARRRRTRPEPGPARRGARAEPPGPPTLQDPPASHLGSSPAQAPSGEAGRRAGG 496
Query: 198 SVEHAHSLTPWIQAHGGRV 216
A S + + GG +
Sbjct: 497 GAVGARSPGDVLGSGGGLI 515
>gi|239743383 PREDICTED: hypothetical protein XP_002342846 [Homo
sapiens]
Length = 585
Score = 32.0 bits (71), Expect = 0.42
Identities = 50/199 (25%), Positives = 68/199 (34%), Gaps = 37/199 (18%)
Query: 53 AAGSPVPNP-PRSHAQEEPTDFLSRLR---RCLPCSLGRGAAPSESPRPWSLPIRP---- 104
+ GSP P P S A R R PC+ G + PRPW +RP
Sbjct: 319 SVGSPCPAAEPVSQAGPPSPGHAGRPRGPEAARPCARGPPSQEPGPPRPWPCALRPRPRL 378
Query: 105 --------------------CYGSEPGPATP-----DFYALVAQRLEQQEQLKSPPSKRI 139
CY PG P + ++ +RL + QL P
Sbjct: 379 RAALPSRRLFSRGAAQQLPCCYKLHPGRHVPLRPFKEKHSEARRRLPEPRQLHLQPVGAN 438
Query: 140 SLASGFFARLVELFCSREDSSRPSRACPGPPPPSQEPLALAMELSRRVAELGDT--RAGL 197
S+ AR + R +RA P PP Q+P A + S A G+ RAG
Sbjct: 439 SVERA--ARRRRTRPEPGPARRGARAEPPGPPTLQDPPASHLGSSPAQAPSGEAGRRAGG 496
Query: 198 SVEHAHSLTPWIQAHGGRV 216
A S + + GG +
Sbjct: 497 GAVGARSPGDVLGSGGGLI 515
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,205,147
Number of Sequences: 37866
Number of extensions: 652520
Number of successful extensions: 4058
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 157
Number of HSP's that attempted gapping in prelim test: 3881
Number of HSP's gapped (non-prelim): 311
length of query: 218
length of database: 18,247,518
effective HSP length: 98
effective length of query: 120
effective length of database: 14,536,650
effective search space: 1744398000
effective search space used: 1744398000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.