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Search of human proteins with 239741949
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239741949 PREDICTED: hypothetical protein XP_002342360 [Homo
sapiens]
(254 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239753493 PREDICTED: hypothetical protein [Homo sapiens] 543 e-155
gi|239748056 PREDICTED: hypothetical protein XP_002346522 [Homo ... 543 e-155
gi|239741949 PREDICTED: hypothetical protein XP_002342360 [Homo ... 543 e-155
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 51 9e-07
gi|18079216 CASK interacting protein 1 [Homo sapiens] 50 1e-06
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 50 2e-06
gi|239753721 PREDICTED: hypothetical protein [Homo sapiens] 48 7e-06
gi|239748254 PREDICTED: hypothetical protein XP_002346600 [Homo ... 48 7e-06
gi|239742155 PREDICTED: hypothetical protein XP_002342442 [Homo ... 48 7e-06
gi|163965366 nascent polypeptide-associated complex alpha subuni... 48 7e-06
gi|62988361 absent in melanoma 1 [Homo sapiens] 48 9e-06
gi|4885407 hyperpolarization activated cyclic nucleotide-gated p... 47 2e-05
gi|21704281 junctophilin 2 isoform 1 [Homo sapiens] 47 2e-05
gi|110832843 TBP-associated factor 4 [Homo sapiens] 47 2e-05
gi|189181750 human immunodeficiency virus type I enhancer bindin... 47 2e-05
gi|116089331 human immunodeficiency virus type I enhancer bindin... 46 3e-05
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 46 4e-05
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 46 4e-05
gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens] 46 4e-05
gi|112421108 capicua homolog [Homo sapiens] 46 4e-05
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 44 1e-04
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 44 1e-04
gi|239757467 PREDICTED: hypothetical protein [Homo sapiens] 44 1e-04
gi|239751993 PREDICTED: hypothetical protein [Homo sapiens] 44 1e-04
gi|239746476 PREDICTED: hypothetical protein [Homo sapiens] 44 1e-04
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 44 1e-04
gi|71274172 ankyrin repeat domain 56 [Homo sapiens] 44 1e-04
gi|113427525 PREDICTED: similar to hCG2037003 [Homo sapiens] 44 2e-04
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ... 44 2e-04
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho... 44 2e-04
>gi|239753493 PREDICTED: hypothetical protein [Homo sapiens]
Length = 254
Score = 543 bits (1398), Expect = e-155
Identities = 254/254 (100%), Positives = 254/254 (100%)
Query: 1 MERLRAGLNGSEWVGWSYVFYPVTPGTSGHCRGGKERPARPPPASSHESHVLDNAPAAAR 60
MERLRAGLNGSEWVGWSYVFYPVTPGTSGHCRGGKERPARPPPASSHESHVLDNAPAAAR
Sbjct: 1 MERLRAGLNGSEWVGWSYVFYPVTPGTSGHCRGGKERPARPPPASSHESHVLDNAPAAAR 60
Query: 61 EPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQG 120
EPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQG
Sbjct: 61 EPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQG 120
Query: 121 NEELPALGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWA 180
NEELPALGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWA
Sbjct: 121 NEELPALGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWA 180
Query: 181 QPAGGRAPGCAAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPPLRLQRY 240
QPAGGRAPGCAAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPPLRLQRY
Sbjct: 181 QPAGGRAPGCAAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPPLRLQRY 240
Query: 241 TTAAAAPALQQRRA 254
TTAAAAPALQQRRA
Sbjct: 241 TTAAAAPALQQRRA 254
>gi|239748056 PREDICTED: hypothetical protein XP_002346522 [Homo
sapiens]
Length = 254
Score = 543 bits (1398), Expect = e-155
Identities = 254/254 (100%), Positives = 254/254 (100%)
Query: 1 MERLRAGLNGSEWVGWSYVFYPVTPGTSGHCRGGKERPARPPPASSHESHVLDNAPAAAR 60
MERLRAGLNGSEWVGWSYVFYPVTPGTSGHCRGGKERPARPPPASSHESHVLDNAPAAAR
Sbjct: 1 MERLRAGLNGSEWVGWSYVFYPVTPGTSGHCRGGKERPARPPPASSHESHVLDNAPAAAR 60
Query: 61 EPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQG 120
EPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQG
Sbjct: 61 EPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQG 120
Query: 121 NEELPALGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWA 180
NEELPALGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWA
Sbjct: 121 NEELPALGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWA 180
Query: 181 QPAGGRAPGCAAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPPLRLQRY 240
QPAGGRAPGCAAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPPLRLQRY
Sbjct: 181 QPAGGRAPGCAAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPPLRLQRY 240
Query: 241 TTAAAAPALQQRRA 254
TTAAAAPALQQRRA
Sbjct: 241 TTAAAAPALQQRRA 254
>gi|239741949 PREDICTED: hypothetical protein XP_002342360 [Homo
sapiens]
Length = 254
Score = 543 bits (1398), Expect = e-155
Identities = 254/254 (100%), Positives = 254/254 (100%)
Query: 1 MERLRAGLNGSEWVGWSYVFYPVTPGTSGHCRGGKERPARPPPASSHESHVLDNAPAAAR 60
MERLRAGLNGSEWVGWSYVFYPVTPGTSGHCRGGKERPARPPPASSHESHVLDNAPAAAR
Sbjct: 1 MERLRAGLNGSEWVGWSYVFYPVTPGTSGHCRGGKERPARPPPASSHESHVLDNAPAAAR 60
Query: 61 EPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQG 120
EPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQG
Sbjct: 61 EPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQG 120
Query: 121 NEELPALGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWA 180
NEELPALGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWA
Sbjct: 121 NEELPALGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWA 180
Query: 181 QPAGGRAPGCAAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPPLRLQRY 240
QPAGGRAPGCAAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPPLRLQRY
Sbjct: 181 QPAGGRAPGCAAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPPLRLQRY 240
Query: 241 TTAAAAPALQQRRA 254
TTAAAAPALQQRRA
Sbjct: 241 TTAAAAPALQQRRA 254
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 51.2 bits (121), Expect = 9e-07
Identities = 60/217 (27%), Positives = 75/217 (34%), Gaps = 37/217 (17%)
Query: 22 PVTPGT-SGHCRGGKERPARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPFPE 80
P PG G G +P PPP P + PPP R R PP
Sbjct: 51 PPPPGKPQGPPPQGGNKPQGPPP------------PGKPQGPPPQGDKSRSPR-SPPGKP 97
Query: 81 EGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHG 140
+G + G+ P G + G +G N PQG P G+ P G
Sbjct: 98 QGPPPQGGNQPQGPPPPPGKPQGPPPQG------GNRPQGP---PPPGK--------PQG 140
Query: 141 KRADGQAQGQLRLPPSTPRAPD-RGGCEPRAPRSQELRSWAQPA-GGRAP-GCAAPWVPQ 197
G R PP P+ P +GG +P+ P + P GG+ P G P PQ
Sbjct: 141 PPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQ 200
Query: 198 CHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPP 234
PP Q R P P P G P+ PP
Sbjct: 201 G---PPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPP 234
Score = 42.0 bits (97), Expect = 5e-04
Identities = 56/217 (25%), Positives = 79/217 (36%), Gaps = 53/217 (24%)
Query: 37 RPARPPPASSHESHVLDNAPAAAREPPP-----PAPAPRCLRLRPPFPEEGVAARPGSCP 91
+P PPP ++ P + PPP P P + + P P +G +R P
Sbjct: 96 KPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGP-PPQGDKSRSPRSP 154
Query: 92 VGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGA---GRMSPHGKRADGQAQ 148
G K +G G N PQG P G+ +G G P G G+ Q
Sbjct: 155 PG----KPQGPPPQG--------GNQPQGPPPPP--GKPQGPPPQGGKKPQGPPPPGKPQ 200
Query: 149 G---------QLRLPPSTPRAPD-RGGCEPRAPRSQELRSWAQPA-GGRAPGCAAPWVPQ 197
G + PP P+ P +GG +P+ P + P GG P
Sbjct: 201 GPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQ-------- 252
Query: 198 CHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPP 234
P PPG+ P PP+ S +++ RSPP
Sbjct: 253 -GPPPPGK----------PQGPPAQGGSKSQSARSPP 278
Score = 41.6 bits (96), Expect = 7e-04
Identities = 49/184 (26%), Positives = 68/184 (36%), Gaps = 33/184 (17%)
Query: 55 APAAAREPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTW 114
+P +P P P P + PP +G G P G + G +G+K +
Sbjct: 40 SPQGGNKPQGPPPPPGKPQGPPP---QGGNKPQGPPPPG------KPQGPPPQGDKSRSP 90
Query: 115 ANLPQGNEELPALGRDRGAGRMSPHGKRADGQAQGQLRL----PPSTPRAPDRGGCEPRA 170
+ P + P G ++ G P GK QG R PP P+ P G + R+
Sbjct: 91 RSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRS 150
Query: 171 PRSQELRSWAQPAGGRAPGCAAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAP 230
PRS + P G PQ P PPG+ P PP P G + P
Sbjct: 151 PRSPPGKPQGPPPQGGNQ-------PQGPPPPPGK----------PQGPP---PQGGKKP 190
Query: 231 RSPP 234
+ PP
Sbjct: 191 QGPP 194
Score = 41.6 bits (96), Expect = 7e-04
Identities = 54/216 (25%), Positives = 77/216 (35%), Gaps = 27/216 (12%)
Query: 25 PGTSGHCRGGKERPARP--PPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPFPEEG 82
P G+ G P +P PP +S + P + PPP PP +G
Sbjct: 61 PPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQG 120
Query: 83 VAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGKR 142
+ G+ P G + G +G+K + + P + P G ++ G P GK
Sbjct: 121 PPPQGGNRPQG-PPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKP 179
Query: 143 ADGQAQG----QLRLPPSTPRAPDRGGCEPRAPRSQELRSWAQPAGGRAPGCAAPWVPQC 198
QG Q PP P+ P G + R+ +S + P G PQ
Sbjct: 180 QGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQ-------PQG 232
Query: 199 HPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPP 234
P PPG+ P PP P G P+ PP
Sbjct: 233 PPPPPGK----------PQGPP---PQGGNKPQGPP 255
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 50.4 bits (119), Expect = 1e-06
Identities = 69/230 (30%), Positives = 85/230 (36%), Gaps = 45/230 (19%)
Query: 35 KER---PARPPPASSHESHV--LDNAPAAARE-------PPPPA-PAPRCLRLRPPFPE- 80
KER P PPP S + + + PA+ + PPPPA P P L PP P
Sbjct: 1155 KEREAGPEPPPPLSVYHNGTGTVRRRPASEQAGPPELPPPPPPAEPPPTDLAHLPPLPPP 1214
Query: 81 EGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHG 140
EG A +P PV + L +G T +P LP G SP
Sbjct: 1215 EGEARKPAKPPVSPKPVLTQPVPKL-QGSPTPTSKKVP-----LPGPG--------SPEV 1260
Query: 141 KRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWAQPAGGRAPGCA---APWVPQ 197
KRA G PP +P+ P P AP+ + + P+G P A A P
Sbjct: 1261 KRAHGTP------PPVSPKPPP----PPTAPKPVKAVA-GLPSGSAGPSPAPSPARQPPA 1309
Query: 198 CHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPPLRLQRYTTAAAAP 247
PPG + PA PPS P PP AAAAP
Sbjct: 1310 ALAKPPGTPPS---LGASPAKPPSPGAPALHVPAKPPRAAAAAAAAAAAP 1356
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 49.7 bits (117), Expect = 2e-06
Identities = 58/219 (26%), Positives = 81/219 (36%), Gaps = 38/219 (17%)
Query: 37 RPARPPPASSHESHVLDNAPAAAREPPP-----PAPAPRCLRLRPPFPEEGVAARPGSCP 91
+P PPP ++ P + PPP P P + + P P +G +R P
Sbjct: 56 KPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGP-PPQGDKSRSPRSP 114
Query: 92 VGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRG---AGRMSPHGKRADGQAQ 148
G K +G G N PQG P G+ +G G P G G+ Q
Sbjct: 115 PG----KPQGPPPQG--------GNQPQGPP--PPPGKPQGPPPQGGNKPQGPPPPGKPQ 160
Query: 149 G----------QLRLPPSTPRA-PDRGGCEPRAPRSQELRSWAQP--AGGRAPGCAAPWV 195
G R PP P+ P +GG +P+ P + P G + G P
Sbjct: 161 GPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGK 220
Query: 196 PQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPP 234
PQ P P G + ++ R+ P P P G P+ PP
Sbjct: 221 PQ-GPPPQGDNKSQSARS-PPGKPQGPPPQGGNQPQGPP 257
Score = 46.2 bits (108), Expect = 3e-05
Identities = 54/204 (26%), Positives = 75/204 (36%), Gaps = 27/204 (13%)
Query: 37 RPARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGA 96
+P PPP ++S + P + PPP PP +G + G+ P G
Sbjct: 158 KPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQG-PP 216
Query: 97 RKLEGTGVLGEGEKLVTWANLPQGNEE-LPALGRDRGAGRMSPHGKRADGQAQG----QL 151
+ G +G+ A P G + P G ++ G P GK QG Q
Sbjct: 217 PPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQG 276
Query: 152 RLPPSTPRA-PDRGGCEPRAPRSQELRSWAQPAGGRAPGCAAPWVPQCHPLPPGQSSAER 210
PP P+ P +GG + R+ RS + P G PQ P PPG+
Sbjct: 277 PPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQ-------PQGPPPPPGK----- 324
Query: 211 YRALCPALPPSSAPSGAEAPRSPP 234
P PP P G P+ PP
Sbjct: 325 -----PQGPP---PQGGNKPQGPP 340
Score = 43.9 bits (102), Expect = 1e-04
Identities = 53/206 (25%), Positives = 70/206 (33%), Gaps = 38/206 (18%)
Query: 37 RPARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGA 96
+P PPP ++S + P + PPP PP +G P G
Sbjct: 220 KPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQG--------PPPQGG 271
Query: 97 RKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGKRADGQAQG--QLRLP 154
K +G G+ PQG P G + SP GK QG Q + P
Sbjct: 272 NKPQGPPPPGK----------PQGP---PPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGP 318
Query: 155 PSTPRAPD----RGGCEPRAPRSQELRSWAQPAGGRAPGCA--APWVPQCHPLPPGQSSA 208
P P P +GG +P+ P P GG A P PQ P G +
Sbjct: 319 PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNN-- 376
Query: 209 ERYRALCPALPPSSAPSGAEAPRSPP 234
P PP A + P++PP
Sbjct: 377 -------PQGPPPPAGGNPQQPQAPP 395
Score = 42.4 bits (98), Expect = 4e-04
Identities = 58/234 (24%), Positives = 80/234 (34%), Gaps = 37/234 (15%)
Query: 22 PVTPGTSGHCRGGKERPARPPPASSHESHVLDNAPAAAREPPP-----PAPAPRCLRLRP 76
P S R +P PPP ++ P + PPP P P + +
Sbjct: 164 PQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQG 223
Query: 77 PFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRG---A 133
P P+ ++ P G K +G G N PQG P G+ +G
Sbjct: 224 PPPQGDNKSQSARSPPG----KPQGPPPQG--------GNQPQGPP--PPPGKPQGPPPQ 269
Query: 134 GRMSPHGKRADGQAQG----------QLRLPPSTPRA-PDRGGCEPRAPRSQELRSWAQP 182
G P G G+ QG R PP P+ P +GG +P+ P + P
Sbjct: 270 GGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPP 329
Query: 183 --AGGRAPGCAAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPP 234
G + G P PQ P P G S + R+ P P P+ PP
Sbjct: 330 PQGGNKPQGPPPPGKPQ-GPPPQGGSKSRSARS-PPGKPQGPPQQEGNNPQGPP 381
Score = 41.2 bits (95), Expect = 9e-04
Identities = 53/215 (24%), Positives = 71/215 (33%), Gaps = 41/215 (19%)
Query: 22 PVTPGTSGHCRGGKERPARPPPASSHESHVLDNAPAAAREPPP-----PAPAPRCLRLRP 76
P S R +P PPP ++ P + PPP P P + +
Sbjct: 226 PQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQG 285
Query: 77 PFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRM 136
P P+ G +R P G K +G G N PQG P
Sbjct: 286 PPPQGGSKSRSSRSPPG----KPQGPPPQG--------GNQPQGPPPPPG---------- 323
Query: 137 SPHGKRADGQAQGQLRLPPSTPRA-PDRGGCEPRAPRSQELRSWAQPAGGRAPGCAAPWV 195
P G G + Q PP P+ P +GG + R+ RS P + P
Sbjct: 324 KPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARS-------PPGKPQGPPQQEGNN 376
Query: 196 PQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAP 230
PQ P P G + + P PP+ P G P
Sbjct: 377 PQGPPPPAGGNPQQ------PQAPPAGQPQGPPRP 405
Score = 31.6 bits (70), Expect = 0.70
Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 2/77 (2%)
Query: 160 APDRGGCEPRAPRSQELRSWAQPAGGRAPGCAAPWVPQCHPLPPGQSSAERYRALCPALP 219
AP +GG +P+ P S + P G P P PP Q + P P
Sbjct: 39 APPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKP 98
Query: 220 PSSAPSG--AEAPRSPP 234
P G + +PRSPP
Sbjct: 99 QGPPPQGDKSRSPRSPP 115
>gi|239753721 PREDICTED: hypothetical protein [Homo sapiens]
Length = 342
Score = 48.1 bits (113), Expect = 7e-06
Identities = 59/211 (27%), Positives = 74/211 (35%), Gaps = 29/211 (13%)
Query: 3 RLRAGLNGSEWVGWSYVFYPVTPGTSGHCRGGKERPAR----PPPASSHESHV---LDNA 55
RLR G G W P+ C G + P R P + L A
Sbjct: 150 RLRGGRGG--WSPAPKAGSPMAAAPGRTCEGKRTAPRRMLLPDSPYAGRPQRARTSLCAA 207
Query: 56 PAAAREPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWA 115
PA+ R P P APR L RP P AA GS + A++ + G G +
Sbjct: 208 PASRRPPAPTVAAPRGLETRPALPRRAGAAVHGSEGLALRAKRRDANA--GSGARRC--- 262
Query: 116 NLPQGNEELP---ALGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPR 172
ELP L G G M +R + ++ PS PR P C+P
Sbjct: 263 ------RELPESWILRAAAGLGPMFLLSERVGDEVWAEIPCRPSAPRFPRGRHCQPLRAL 316
Query: 173 SQELRSWAQPAGGRAPGCAAPWVPQCHPLPP 203
LR A GGR AP+ HP P
Sbjct: 317 RTPLRPGA--VGGR----GAPFSGFRHPARP 341
>gi|239748254 PREDICTED: hypothetical protein XP_002346600 [Homo
sapiens]
Length = 342
Score = 48.1 bits (113), Expect = 7e-06
Identities = 59/211 (27%), Positives = 74/211 (35%), Gaps = 29/211 (13%)
Query: 3 RLRAGLNGSEWVGWSYVFYPVTPGTSGHCRGGKERPAR----PPPASSHESHV---LDNA 55
RLR G G W P+ C G + P R P + L A
Sbjct: 150 RLRGGRGG--WSPAPKAGSPMAAAPGRTCEGKRTAPRRMLLPDSPYAGRPQRARTSLCAA 207
Query: 56 PAAAREPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWA 115
PA+ R P P APR L RP P AA GS + A++ + G G +
Sbjct: 208 PASRRPPAPTVAAPRGLETRPALPRRAGAAVHGSEGLALRAKRRDANA--GSGARRC--- 262
Query: 116 NLPQGNEELP---ALGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPR 172
ELP L G G M +R + ++ PS PR P C+P
Sbjct: 263 ------RELPESWILRAAAGLGPMFLLSERVGDEVWAEIPCRPSAPRFPRGRHCQPLRAL 316
Query: 173 SQELRSWAQPAGGRAPGCAAPWVPQCHPLPP 203
LR A GGR AP+ HP P
Sbjct: 317 RTPLRPGA--VGGR----GAPFSGFRHPARP 341
>gi|239742155 PREDICTED: hypothetical protein XP_002342442 [Homo
sapiens]
Length = 342
Score = 48.1 bits (113), Expect = 7e-06
Identities = 59/211 (27%), Positives = 74/211 (35%), Gaps = 29/211 (13%)
Query: 3 RLRAGLNGSEWVGWSYVFYPVTPGTSGHCRGGKERPAR----PPPASSHESHV---LDNA 55
RLR G G W P+ C G + P R P + L A
Sbjct: 150 RLRGGRGG--WSPAPKAGSPMAAAPGRTCEGKRTAPRRMLLPDSPYAGRPQRARTSLCAA 207
Query: 56 PAAAREPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWA 115
PA+ R P P APR L RP P AA GS + A++ + G G +
Sbjct: 208 PASRRPPAPTVAAPRGLETRPALPRRAGAAVHGSEGLALRAKRRDANA--GSGARRC--- 262
Query: 116 NLPQGNEELP---ALGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPR 172
ELP L G G M +R + ++ PS PR P C+P
Sbjct: 263 ------RELPESWILRAAAGLGPMFLLSERVGDEVWAEIPCRPSAPRFPRGRHCQPLRAL 316
Query: 173 SQELRSWAQPAGGRAPGCAAPWVPQCHPLPP 203
LR A GGR AP+ HP P
Sbjct: 317 RTPLRPGA--VGGR----GAPFSGFRHPARP 341
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 48.1 bits (113), Expect = 7e-06
Identities = 66/240 (27%), Positives = 84/240 (35%), Gaps = 32/240 (13%)
Query: 22 PVTPG-TSGHCRGGKERP----ARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRP 76
P TP T +GG P A PPA++ S P P P AP P
Sbjct: 1057 PTTPAATLPSPKGGPATPSLKGAPTPPAATPPS------PKGGPATPSPKGAPMPPAATP 1110
Query: 77 PFPEEGVAARPGS-CPVGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGR 135
P P+ G+A P P A G L P+G PA A
Sbjct: 1111 PSPKGGLATPPHKGAPTTPAATPPSPKGGLATPP--------PKGAPTTPA------ATP 1156
Query: 136 MSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWA---QPAGGRAPGC-- 190
SP G A +G P +TP +P +GG +P+ A P GG A
Sbjct: 1157 PSPKGGLATPPPKGAPTTPAATPPSP-KGGLATPSPKGAPTTPAATPPSPKGGLATPSPK 1215
Query: 191 AAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPPLRLQRYTTAAAAPALQ 250
AP P P P A P P ++ PS P +PP + AA P+L+
Sbjct: 1216 GAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLK 1275
Score = 44.3 bits (103), Expect = 1e-04
Identities = 59/229 (25%), Positives = 75/229 (32%), Gaps = 43/229 (18%)
Query: 25 PGTSGHCRGGKERPARP-------PPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPP 77
P S +G K+ PA P + S V +P PP P P + L P
Sbjct: 837 PENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNL--P 894
Query: 78 FPEEGVAA-----RPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRG 132
FP+EG A P +K T K + + P+G PA
Sbjct: 895 FPKEGPATPAPKQAPALSMTSSSPKKARAT----PAPKGIPASPSPKGAPTPPA------ 944
Query: 133 AGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWAQPAGGRAPGCAA 192
A SP G A + P +TP +P G P P G P A
Sbjct: 945 ATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATP------------SPKGAPTPPAAT 992
Query: 193 PWVPQCHPLPPGQSSAERYRALCPALPPSSA-----PSGAEAP--RSPP 234
P P+ P P A A+ P P S P GA P +PP
Sbjct: 993 PPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPP 1041
Score = 43.9 bits (102), Expect = 1e-04
Identities = 59/211 (27%), Positives = 74/211 (35%), Gaps = 35/211 (16%)
Query: 32 RGGKERPARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPFPEEGVAA-RPGSC 90
+G PA PP+ P PPP AP PP P+ G+A P
Sbjct: 1123 KGAPTTPAATPPS-----------PKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGA 1171
Query: 91 PVGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGKRADGQAQGQ 150
P A G L P+G PA A SP G A +G
Sbjct: 1172 PTTPAATPPSPKGGLATPS--------PKGAPTTPA------ATPPSPKGGLATPSPKGA 1217
Query: 151 LRLPPSTPRAPDRGGCEPRAPRSQELRSWA---QPAGGRA--PGCAAPWVPQCHP--LPP 203
P +TP +P +GG +P+ A P GG A P AP P P L
Sbjct: 1218 PTTPAATPPSP-KGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKG 1276
Query: 204 GQSSAERYRALCPALPPSSAPSGAEAPRSPP 234
G ++ A PA+ +P G A SPP
Sbjct: 1277 GLATPPHKGAPNPAVVTPPSPKGGPA-TSPP 1306
Score = 43.1 bits (100), Expect = 2e-04
Identities = 62/246 (25%), Positives = 83/246 (33%), Gaps = 36/246 (14%)
Query: 22 PVTPG-TSGHCRGGKERPARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPFPE 80
P TP T +GG P PP + +P P P AP PP P+
Sbjct: 1149 PTTPAATPPSPKGGLATP--PPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPK 1206
Query: 81 EGVAA-RPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPH 139
G+A P P A G L P+G PA A SP
Sbjct: 1207 GGLATPSPKGAPTTPAATPPSPKGGLATPS--------PKGAPTTPA------ATPPSPK 1252
Query: 140 GKRADGQAQGQLRLPPSTPRA--------PDRGGCEPRA---PRSQELRSWAQPAGGRAP 188
G A +G P +TP + P +G P P + + + P G P
Sbjct: 1253 GGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTP 1312
Query: 189 GCAAPWVPQCHPLPPGQSSAERYRALCPALP------PSSAPSGAEAPRSPPLRLQRYTT 242
A P P+ P P A A+ P P P++ PS P +P + + T
Sbjct: 1313 PAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSK-EGPTP 1371
Query: 243 AAAAPA 248
AA P+
Sbjct: 1372 PAATPS 1377
Score = 42.4 bits (98), Expect = 4e-04
Identities = 58/236 (24%), Positives = 80/236 (33%), Gaps = 48/236 (20%)
Query: 22 PVTPGTSGHCRGG------KERPARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLR 75
P P T+ +GG KE P P SH+ P+ R P P+P
Sbjct: 1347 PTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSP-------- 1398
Query: 76 PPFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPA---LGRDRG 132
+G P P+ +K T V EG A +G+ PA + +
Sbjct: 1399 -----KGDPTSPAVIPL--SPKKAPATPVTREGA-----ATPSKGDLTPPAVTPVSLKKA 1446
Query: 133 AGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWAQPAGGRAPGCAA 192
+P G A ++G LP TP +P EP AP+ S + A A
Sbjct: 1447 PATSAPKGGPATPSSKGDPTLPAVTPPSPK----EPPAPKQVATSSSPKKAPATPAPMGA 1502
Query: 193 PWVPQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPPLR-LQRYTTAAAAP 247
P +P P P + A PS P +P L + T A AP
Sbjct: 1503 PTLPAVIPSSPKEVPA--------------TPSSRRDPIAPTATLLSKKTPATLAP 1544
Score = 41.2 bits (95), Expect = 9e-04
Identities = 54/220 (24%), Positives = 69/220 (31%), Gaps = 43/220 (19%)
Query: 35 KERPARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGW 94
KE PA P P + + ++P AR P P P P P +G P + P
Sbjct: 897 KEGPATPAPKQAPALSMTSSSPKKARATPAPKGIP-----ASPSP-KGAPTPPAATPPSP 950
Query: 95 GARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGKRADGQAQGQLRLP 154
G WA P PA A SP G A +G P
Sbjct: 951 KG---------GPATPSPKWAPTP------PA------ATPPSPKGGPATPSPKGAPTPP 989
Query: 155 PSTPRAPDRGGCEPRAPRSQELRSWAQPAGGRAPGCAAP----WVPQCHPLPPGQSSAER 210
+TP +P G P P G P P P P P G S+
Sbjct: 990 AATPPSPKGGPATP------------SPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPA 1037
Query: 211 YRALCPALPPSSAPSGAEAPRSPPLRLQRYTTAAAAPALQ 250
P P++ P AP +P L A P+L+
Sbjct: 1038 ATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLK 1077
Score = 35.4 bits (80), Expect = 0.048
Identities = 49/216 (22%), Positives = 73/216 (33%), Gaps = 21/216 (9%)
Query: 22 PVTPGTSGHCRGGKERPARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPFPEE 81
P TP + G P P + + ++P A P P AP + P P+E
Sbjct: 1456 PATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKE 1515
Query: 82 GVAARPGS--CPVGWGARKL--EGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMS 137
V A P S P+ A L + L E L+ A ++ PA+ + A +
Sbjct: 1516 -VPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEA-PAT 1573
Query: 138 PHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWAQPAGGRAPGCAAPWVPQ 197
P K A PP+ + +G P+ + P P P P+
Sbjct: 1574 PSSKEASS--------PPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPE 1625
Query: 198 CHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSP 233
P P P PP + S ++P SP
Sbjct: 1626 KGPATPAPKGT-------PTSPPVTPSSLKDSPTSP 1654
>gi|62988361 absent in melanoma 1 [Homo sapiens]
Length = 1723
Score = 47.8 bits (112), Expect = 9e-06
Identities = 42/147 (28%), Positives = 56/147 (38%), Gaps = 11/147 (7%)
Query: 24 TPGTSGHCRGGKERPARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPFPEEGV 83
+PGT G RG +R +PPPASS + A P PPA PR P E
Sbjct: 81 SPGTKGQLRGESDRSKQPPPASSPTKR-KGRSRALEAVPAPPASGPRA-----PAKESPP 134
Query: 84 AARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPH-GKR 142
P PV G G E + + + + LP + + G + H R
Sbjct: 135 KRVPDPSPVTKGTAAESGE----EAARAIPRELPVKSSSLLPEIKPEHKRGPLPNHFNGR 190
Query: 143 ADGQAQGQLRLPPSTPRAPDRGGCEPR 169
A+G +L P A D G +PR
Sbjct: 191 AEGGRSRELGRAAGAPGASDADGLKPR 217
>gi|4885407 hyperpolarization activated cyclic nucleotide-gated
potassium channel 4 [Homo sapiens]
Length = 1203
Score = 47.0 bits (110), Expect = 2e-05
Identities = 65/239 (27%), Positives = 91/239 (38%), Gaps = 62/239 (25%)
Query: 56 PAAAREPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGA-RKLEGTGVLGEGEKLVT- 113
P+++ PPP A C P P GVAA + G+G K G + L+T
Sbjct: 876 PSSSSSPPPGA----CGSPSAPTPSAGVAA---TTIAGFGHFHKALGGSLSSSDSPLLTP 928
Query: 114 ---WANLPQGNEELPALGRDRGA---------------------GRMS-PHGKRADGQAQ 148
A PQ + PA RG G++ P G+ + G A
Sbjct: 929 LQPGARSPQAAQPSPAPPGARGGLGLPEHFLPPPPSSRSPSSSPGQLGQPPGELSLGLAT 988
Query: 149 GQLRLPPSTPRAPD--------RGGCEPRAPRSQELRSWAQPAGGRAPGCAAPWVPQCHP 200
G L P + PR P+ GG P P GG +P +P P+ P
Sbjct: 989 GPLSTPETPPRQPEPPSLVAGASGGASPVG---------FTPRGGLSPPGHSPGPPRTFP 1039
Query: 201 LPPGQSSAERYRALCPALPPSSAPSGAEAPR---SPPLRLQRYT-----TAAAAPALQQ 251
P ++S L LPP+S+P + P+ +PPL R T +A+ PAL Q
Sbjct: 1040 SAPPRASGSHGSLL---LPPASSPPPPQVPQRRGTPPLTPGRLTQDLKLISASQPALPQ 1095
>gi|21704281 junctophilin 2 isoform 1 [Homo sapiens]
Length = 696
Score = 47.0 bits (110), Expect = 2e-05
Identities = 56/189 (29%), Positives = 71/189 (37%), Gaps = 22/189 (11%)
Query: 53 DNAPAAAREPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGARK-LEGTGVLGEGEKL 111
D AA P PP +P+ P PE G + G+ P R + G+L G
Sbjct: 454 DRGAGAAGLPQPPRESPQLHERETPRPEGGSPSPAGTPPQPKRPRPGVSKDGLLSPG--- 510
Query: 112 VTWANLPQGNEELPALGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAP 171
W P G E ++ GAGR SP + A L+ PP AP R EP
Sbjct: 511 -AWNGEPSG-EGSRSVTPSEGAGRRSPARPATERMAIEALQAPP----APSR---EPEVA 561
Query: 172 RSQELRSWAQPAGGRAPGCAAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPS--GAEA 229
Q S+A P P+ Q P G SA PA P AP+ G E
Sbjct: 562 LYQGYHSYAVRT---TPPEPPPFEDQPEPEVSGSESAPS----SPATAPLQAPTLRGPEP 614
Query: 230 PRSPPLRLQ 238
R P +L+
Sbjct: 615 ARETPAKLE 623
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 46.6 bits (109), Expect = 2e-05
Identities = 69/238 (28%), Positives = 84/238 (35%), Gaps = 26/238 (10%)
Query: 25 PGTSGHCRGGKERPARPPPASSHESHV-LDNAPAAAREPPPP-------APAPRCLRLRP 76
P +G R G P RP P S V AP AA+ PPP AP P +
Sbjct: 89 PPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAA 148
Query: 77 -PFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGR 135
P P A+P P AR G G G G P G L + A
Sbjct: 149 GPEPAPAGPAKPAG-PAALAARAGPGPGP-GPGPGPGPGPGKPAGPGAAQTL--NGSAAL 204
Query: 136 MSPHGKRADGQA----QGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWAQPAGGRAPGCA 191
++ H A + LP P AP G + P + PA P
Sbjct: 205 LNSHHAAAPAVSLVNNGPAALLPLPKPAAP---GTVIQTPPFVGAAAPPAPAAPSPPAAP 261
Query: 192 APWVPQCHPLPPGQSSAERYRAL-CPALPPSSAPSGAEAPRSPPLRLQRYTTAAAAPA 248
AP P P PP + A R PA PP++AP+ PP Q +A AAPA
Sbjct: 262 APAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPA-----VPPPAAAQNGGSAGAAPA 314
Score = 38.5 bits (88), Expect = 0.006
Identities = 70/260 (26%), Positives = 83/260 (31%), Gaps = 51/260 (19%)
Query: 39 ARPPPASSHESHVLDNAPAA-AREPPPPAPAPRCLRLRPPFPEEG--------------- 82
A PPA + S APAA A PPPP PAP L RPP G
Sbjct: 246 AAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATL-ARPPGHPAGPPTAAPAVPPPAAAQ 304
Query: 83 ----VAARPGSCPVGWGARKLEG------------TGVLGEGEKLVTWANLPQGNEELPA 126
A P P G + G GV E K V A P + L A
Sbjct: 305 NGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQA-APPAAQTLAA 363
Query: 127 LGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPRAPD--RGGCEPRAPRSQELRSWAQPAG 184
G A M G G +PP P P G +S A +G
Sbjct: 364 SGPASTAASM-VIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQSLSRTPTATTSG 422
Query: 185 GRA---PGCAAPWVP---------QCHPLPPGQSSAERYRALCPALPPSS-APSGAEAPR 231
RA P AP +P Q LPPG +P + A A+A
Sbjct: 423 IRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRSENGQLLMIPQQALAQMQAQAHA 482
Query: 232 SPPLRL-QRYTTAAAAPALQ 250
P + R T +AP +Q
Sbjct: 483 QPQTTMAPRPATPTSAPPVQ 502
Score = 32.7 bits (73), Expect = 0.31
Identities = 57/218 (26%), Positives = 71/218 (32%), Gaps = 26/218 (11%)
Query: 40 RPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPFPEEGVAARPGS---------- 89
R A + +HV+ +PA A P APA P P G ARPG
Sbjct: 51 RAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAG-RARPGGGGPQRPGPPS 109
Query: 90 -----CPVGWG--ARKLE--GTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHG 140
P G A KL G G + A + G E PA G + AG +
Sbjct: 110 PRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPA-GPAKPAGPAALAA 168
Query: 141 KRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQEL---RSWAQPAGGRAPGCAAPWVPQ 197
+ G G P P P G S L A PA A +P
Sbjct: 169 RAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPL 228
Query: 198 CHPLPPGQ--SSAERYRALCPALPPSSAPSGAEAPRSP 233
P PG + A P P + +P A AP +P
Sbjct: 229 PKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAP 266
>gi|189181750 human immunodeficiency virus type I enhancer binding
protein 3 b [Homo sapiens]
Length = 2405
Score = 46.6 bits (109), Expect = 2e-05
Identities = 59/206 (28%), Positives = 82/206 (39%), Gaps = 44/206 (21%)
Query: 35 KERPARPPPASSHESHVLDNAP---AAAREPPPPAPAPRCLRLRPPFPEEGVAARPGSCP 91
KE +RPP A H D++P + AREP AP+P L + P G+ P
Sbjct: 1973 KEAGSRPPLARKHSLTKNDSSPQRCSPAREPQASAPSPPGLHVDP-------GRGMGALP 2025
Query: 92 VGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGKRADGQAQGQL 151
G +L + G +L A++ E D G R SP + + GQA+
Sbjct: 2026 CGSPRLQLSPLTLCPLGRELAPRAHVLSKLEGT----TDPGLPRYSPTRRWSPGQAESPP 2081
Query: 152 RLPP------STPRAPDRG------GCEPR-----APRSQELRSWAQPAGGRAP-GCAAP 193
R P + P +P G G +PR AP +L S R+P CA+P
Sbjct: 2082 RSAPPGKWALAGPGSPSAGEHGPGLGLDPRVLFPPAPLPHKLLS-------RSPETCASP 2134
Query: 194 W-----VPQCHPLPPGQSSAERYRAL 214
W P C P P S+ + AL
Sbjct: 2135 WKAESRSPSCSPGPAHPLSSRPFSAL 2160
>gi|116089331 human immunodeficiency virus type I enhancer binding
protein 3 [Homo sapiens]
Length = 2406
Score = 46.2 bits (108), Expect = 3e-05
Identities = 59/207 (28%), Positives = 82/207 (39%), Gaps = 45/207 (21%)
Query: 35 KERPARPPPASSHESHVLDNAP---AAAREPPPPAPAPRCLRLRPPFPEEGVAARPGSCP 91
KE +RPP A H D++P + AREP AP+P L + P G+ P
Sbjct: 1973 KEAGSRPPLARKHSLTKNDSSPQRCSPAREPQASAPSPPGLHVDP-------GRGMGALP 2025
Query: 92 VGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGKRADGQAQGQL 151
G +L + G +L A++ E D G R SP + + GQA+
Sbjct: 2026 CGSPRLQLSPLTLCPLGRELAPRAHVLSKLEGT----TDPGLPRYSPTRRWSPGQAESPP 2081
Query: 152 RLPP------STPRAPDRG------GCEPR-----APRSQELRSWAQPAGGRAP-GCAAP 193
R P + P +P G G +PR AP +L S R+P CA+P
Sbjct: 2082 RSAPPGKWALAGPGSPSAGEHGPGLGLDPRVLFPPAPLPHKLLS-------RSPETCASP 2134
Query: 194 W------VPQCHPLPPGQSSAERYRAL 214
W P C P P S+ + AL
Sbjct: 2135 WQKAESRSPSCSPGPAHPLSSRPFSAL 2161
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 45.8 bits (107), Expect = 4e-05
Identities = 62/232 (26%), Positives = 73/232 (31%), Gaps = 57/232 (24%)
Query: 22 PVTPGTSGHCRGGKERPARPPPA---SSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPF 78
P P T K P PP S H V P + P P P P PP
Sbjct: 250 PPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPP 309
Query: 79 PEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSP 138
P +RPG P+ + GN+E P L
Sbjct: 310 PPP--PSRPGPPPLPPSS----------------------SGNDETPRL----------- 334
Query: 139 HGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWAQPAGGRAPGCAAPWVPQC 198
Q L L STP P G P P E P PG + P P
Sbjct: 335 --------PQRNLSLSSSTPPLPSPGRSGPLPPPPSER---PPPPVRDPPGRSGPLPPP- 382
Query: 199 HPLPPGQSSAERYRALCPALPPSSAPSGAEAPRS---PPLRLQRYTTAAAAP 247
PP + RAL PA P + SG ++PRS PPL R + A P
Sbjct: 383 ---PPVSRNGSTSRAL-PATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPP 430
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 45.8 bits (107), Expect = 4e-05
Identities = 62/232 (26%), Positives = 73/232 (31%), Gaps = 57/232 (24%)
Query: 22 PVTPGTSGHCRGGKERPARPPPA---SSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPF 78
P P T K P PP S H V P + P P P P PP
Sbjct: 250 PPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPP 309
Query: 79 PEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSP 138
P +RPG P+ + GN+E P L
Sbjct: 310 PPP--PSRPGPPPLPPSS----------------------SGNDETPRL----------- 334
Query: 139 HGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWAQPAGGRAPGCAAPWVPQC 198
Q L L STP P G P P E P PG + P P
Sbjct: 335 --------PQRNLSLSSSTPPLPSPGRSGPLPPPPSER---PPPPVRDPPGRSGPLPPP- 382
Query: 199 HPLPPGQSSAERYRALCPALPPSSAPSGAEAPRS---PPLRLQRYTTAAAAP 247
PP + RAL PA P + SG ++PRS PPL R + A P
Sbjct: 383 ---PPVSRNGSTSRAL-PATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPP 430
>gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens]
Length = 261
Score = 45.8 bits (107), Expect = 4e-05
Identities = 55/173 (31%), Positives = 62/173 (35%), Gaps = 25/173 (14%)
Query: 22 PVTPGTS--GHCRGGKER-----PARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRL 74
P TPG G RG R PARPP A L P P P PA RCL L
Sbjct: 37 PRTPGGQLPGARRGPGPRRPAPLPARPPGALGSVLRPLRARPGC--RPRRPHPAARCLPL 94
Query: 75 RPPFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKL---------VTWANLPQGN---E 122
RP P RPG P+ WG+ + G L V A P G+
Sbjct: 95 RPHRPTRR-HRRPGGFPLAWGSPQPAPRPAPGRSSALALAGGAAPGVARAQRPGGSGGRS 153
Query: 123 ELPALGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQE 175
G RG G + P G R A G P T RA + G P + E
Sbjct: 154 HPGGPGSPRGGGTVGP-GDRGPAAADG--GRPQRTVRAAETRGAAAAPPLTLE 203
>gi|112421108 capicua homolog [Homo sapiens]
Length = 1608
Score = 45.8 bits (107), Expect = 4e-05
Identities = 55/207 (26%), Positives = 75/207 (36%), Gaps = 26/207 (12%)
Query: 37 RPARPPPASSHESHVLDNAPAAAREPP-PPAPAPRCLRLRPPFPEEGVAARPGSCPVGWG 95
+P++ PP+ + PAA P PPAPA PFP +A GS
Sbjct: 1110 QPSQAPPSLVYTVATSTTPPAATILPKGPPAPATATPAPTSPFP----SATAGSMTYSLV 1165
Query: 96 ARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRM--------SPHGKRADGQA 147
A K + + A++P G+ E A GR A R P ++ +
Sbjct: 1166 APKAQRPSPKAPQKVKAAIASIPVGSFEAGASGRPGPAPRQPLEPGPVREPTAPESELEG 1225
Query: 148 QGQLRLPPSTPRA--PDRGGCEPRAPRSQELRSWAQPA--GGRAPGCAAPWVPQCHPLPP 203
Q PP P P P P ++E S P + P ++ W P
Sbjct: 1226 QPTPPAPPPLPETWTPTARSSPPLPPPAEERTSAKGPETMASKFPSSSSDW------RVP 1279
Query: 204 GQSSAERYRALCPALPPSSAPSGAEAP 230
GQ R P PPS AP+ A AP
Sbjct: 1280 GQGLENRGE---PPTPPSPAPAPAVAP 1303
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 44.3 bits (103), Expect = 1e-04
Identities = 60/226 (26%), Positives = 73/226 (32%), Gaps = 38/226 (16%)
Query: 38 PARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGW--- 94
PA P P S AP + PPPP P P PP P + P S P G
Sbjct: 575 PAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPP---PPPLPGGVCISSPPSLPGGTAIS 631
Query: 95 ------GARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGKRADGQAQ 148
G + L EG + + ++LP G +P G+ R+ P G A
Sbjct: 632 PPPPLSGDATIPPPPPLPEGVGIPSPSSLP-GGTAIPPPPPLPGSARIPPPPPPLPGSA- 689
Query: 149 GQLRLPPSTPRAPDRGGCEPRAPRSQELRSWAQPAG-GRAPGCAAPWVPQCHPLPPGQSS 207
+PP P P G P P P G G P P P P PPG
Sbjct: 690 ---GIPPPPPPLPGEAGMPPPPP--------PLPGGPGIPPPPPFPGGPGIPPPPPGMGM 738
Query: 208 AERYRALCPALPPSSAPSGAEAPRSPPLRLQRYTTAAAAPALQQRR 253
P P G P +P L P +Q RR
Sbjct: 739 ------------PPPPPFGFGVPAAPVLPFGLTPKKLYKPEVQLRR 772
Score = 32.7 bits (73), Expect = 0.31
Identities = 23/67 (34%), Positives = 26/67 (38%), Gaps = 16/67 (23%)
Query: 33 GGKERPARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPFP----EEGVAARPG 88
GG P PP P +AR PPPP P P + PP P E G+ P
Sbjct: 662 GGTAIPPPPP------------LPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPP 709
Query: 89 SCPVGWG 95
P G G
Sbjct: 710 PLPGGPG 716
Score = 28.5 bits (62), Expect = 5.9
Identities = 22/70 (31%), Positives = 25/70 (35%), Gaps = 18/70 (25%)
Query: 22 PVTPGTSGHCRGGKERPARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPFPEE 81
P PG++G P PPP P A PPPP P P + PP P
Sbjct: 683 PPLPGSAGI-------PPPPPPL-----------PGEAGMPPPPPPLPGGPGIPPPPPFP 724
Query: 82 GVAARPGSCP 91
G P P
Sbjct: 725 GGPGIPPPPP 734
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 44.3 bits (103), Expect = 1e-04
Identities = 60/226 (26%), Positives = 73/226 (32%), Gaps = 38/226 (16%)
Query: 38 PARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGW--- 94
PA P P S AP + PPPP P P PP P + P S P G
Sbjct: 584 PAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPP---PPPLPGGVCISSPPSLPGGTAIS 640
Query: 95 ------GARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGKRADGQAQ 148
G + L EG + + ++LP G +P G+ R+ P G A
Sbjct: 641 PPPPLSGDATIPPPPPLPEGVGIPSPSSLP-GGTAIPPPPPLPGSARIPPPPPPLPGSA- 698
Query: 149 GQLRLPPSTPRAPDRGGCEPRAPRSQELRSWAQPAG-GRAPGCAAPWVPQCHPLPPGQSS 207
+PP P P G P P P G G P P P P PPG
Sbjct: 699 ---GIPPPPPPLPGEAGMPPPPP--------PLPGGPGIPPPPPFPGGPGIPPPPPGMGM 747
Query: 208 AERYRALCPALPPSSAPSGAEAPRSPPLRLQRYTTAAAAPALQQRR 253
P P G P +P L P +Q RR
Sbjct: 748 ------------PPPPPFGFGVPAAPVLPFGLTPKKLYKPEVQLRR 781
Score = 32.7 bits (73), Expect = 0.31
Identities = 23/67 (34%), Positives = 26/67 (38%), Gaps = 16/67 (23%)
Query: 33 GGKERPARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPFP----EEGVAARPG 88
GG P PP P +AR PPPP P P + PP P E G+ P
Sbjct: 671 GGTAIPPPPP------------LPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPP 718
Query: 89 SCPVGWG 95
P G G
Sbjct: 719 PLPGGPG 725
Score = 28.5 bits (62), Expect = 5.9
Identities = 22/70 (31%), Positives = 25/70 (35%), Gaps = 18/70 (25%)
Query: 22 PVTPGTSGHCRGGKERPARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPFPEE 81
P PG++G P PPP P A PPPP P P + PP P
Sbjct: 692 PPLPGSAGI-------PPPPPPL-----------PGEAGMPPPPPPLPGGPGIPPPPPFP 733
Query: 82 GVAARPGSCP 91
G P P
Sbjct: 734 GGPGIPPPPP 743
>gi|239757467 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 43.9 bits (102), Expect = 1e-04
Identities = 52/166 (31%), Positives = 71/166 (42%), Gaps = 27/166 (16%)
Query: 103 GVLGEGEK----LVTWANL--------PQGNEELPALGRDRGAGRMSPHGKRADGQAQGQ 150
G G G++ L+ WA+ P L ALGRD G A+ + + Q
Sbjct: 9 GGRGAGQRVPSVLLAWASWRLLGRIPSPCAGRGLEALGRDW-------RGTVAEPRPEAQ 61
Query: 151 LRLPPSTP-----RAPDRGGCEPRAPRSQELRSWAQPAGGRAPGCAAPWVPQCHPLPPGQ 205
R+P R+ GG AP E+ S +PAG A AA P P
Sbjct: 62 GRVPSFRSNARRVRSVRGGGVTAPAPPDAEVGS-GRPAGLAARAAAAAPRSLRKPSPSPS 120
Query: 206 SSAERYRAL-CPALPPSSAPSGAEAPRSPPLRLQRYTT-AAAAPAL 249
S R RA P + PS +PS + +P P R R+TT A+++PAL
Sbjct: 121 PSLRRRRARNSPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSPAL 166
>gi|239751993 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 43.9 bits (102), Expect = 1e-04
Identities = 52/166 (31%), Positives = 71/166 (42%), Gaps = 27/166 (16%)
Query: 103 GVLGEGEK----LVTWANL--------PQGNEELPALGRDRGAGRMSPHGKRADGQAQGQ 150
G G G++ L+ WA+ P L ALGRD G A+ + + Q
Sbjct: 9 GGRGAGQRVPSVLLAWASWRLLGRIPSPCAGRGLEALGRDW-------RGTVAEPRPEAQ 61
Query: 151 LRLPPSTP-----RAPDRGGCEPRAPRSQELRSWAQPAGGRAPGCAAPWVPQCHPLPPGQ 205
R+P R+ GG AP E+ S +PAG A AA P P
Sbjct: 62 GRVPSFRSNARRVRSVRGGGVTAPAPPDAEVGS-GRPAGLAARAAAAAPRSLRKPSPSPS 120
Query: 206 SSAERYRAL-CPALPPSSAPSGAEAPRSPPLRLQRYTT-AAAAPAL 249
S R RA P + PS +PS + +P P R R+TT A+++PAL
Sbjct: 121 PSLRRRRARNSPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSPAL 166
>gi|239746476 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 43.9 bits (102), Expect = 1e-04
Identities = 52/166 (31%), Positives = 71/166 (42%), Gaps = 27/166 (16%)
Query: 103 GVLGEGEK----LVTWANL--------PQGNEELPALGRDRGAGRMSPHGKRADGQAQGQ 150
G G G++ L+ WA+ P L ALGRD G A+ + + Q
Sbjct: 9 GGRGAGQRVPSVLLAWASWRLLGCIPSPCAGRGLEALGRDW-------RGTVAEPRPEAQ 61
Query: 151 LRLPPSTP-----RAPDRGGCEPRAPRSQELRSWAQPAGGRAPGCAAPWVPQCHPLPPGQ 205
R+P R+ GG AP E+ S +PAG A AA P P
Sbjct: 62 GRVPSFRSNARRVRSVRGGGVTAPAPPDAEVGS-GRPAGLAARAAAAAPRSLRKPSPSPS 120
Query: 206 SSAERYRAL-CPALPPSSAPSGAEAPRSPPLRLQRYTT-AAAAPAL 249
S R RA P + PS +PS + +P P R R+TT A+++PAL
Sbjct: 121 PSLRRRRARNSPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSPAL 166
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 43.9 bits (102), Expect = 1e-04
Identities = 50/211 (23%), Positives = 74/211 (35%), Gaps = 31/211 (14%)
Query: 38 PARPPPASSHESHVLDNAPAAAR-EPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGA 96
PA P P +S D R E PP P P L P FPE G P
Sbjct: 800 PAEPRPLTSPLRQAADEDDKGMRSETPPVPPPPPYLASYPGFPENGAPGPP--------- 850
Query: 97 RKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGKRADGQAQGQLRLPPS 156
+ + G + + W P G++E+ + +P K+ + + P
Sbjct: 851 --ISRFPLEEPGPRPLPW---PPGSDEVAKI--------QTPPPKKEPPKEETAQLTGPE 897
Query: 157 TPRAPDRG-GCEPRAPRSQELRSWAQPAGGRAPGCAAPWVPQCHPLPPGQSSAERYRALC 215
R P RG G + P S + G PG + +P P P + + +
Sbjct: 898 AGRKPARGVGSGGQGPPPPRRESRTETRWGPRPGSSRRGIPPEEPGAPPRRAGPIKKPPP 957
Query: 216 PA----LPPSSAPSGAEAPRSP---PLRLQR 239
P LPP G E P+ P PL++ +
Sbjct: 958 PTKVEELPPKPLEQGDETPKPPKPDPLKITK 988
Score = 36.6 bits (83), Expect = 0.022
Identities = 65/234 (27%), Positives = 76/234 (32%), Gaps = 55/234 (23%)
Query: 22 PVTPGTSGH-----CRG--GKERPARPPPASSHESHVLDNAPAAAREPPPPAP-----AP 69
P PG S C G G E P RPPPA H D +P PP P +
Sbjct: 1684 PKRPGGSSPLNAVPCEGPPGSEPPRRPPPAP----HDGDRKELPREQPLPPGPIGTERSQ 1739
Query: 70 RCLRLRPPFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGR 129
R R P P + RPG PV +G + L G+ L L E + R
Sbjct: 1740 RTDRGTEPGPIRP-SHRPGP-PVQFGTSDKDSDLRLVVGDSLKAEKELTASVTEAIPVSR 1797
Query: 130 D-----RGAGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSW----- 179
D A P K D G C P P S R +
Sbjct: 1798 DWELLPSAAASAEPQSKNLDS------------------GHCVPE-PSSSGQRLYPEVFY 1838
Query: 180 --AQPAGGRAPGCAAPWVPQCHP----LPPGQSSAERYRALCPALPPSSAPSGA 227
A P+ + G A Q HP PG S YR+ LPP AP A
Sbjct: 1839 GSAGPSSSQISGGAMD--SQLHPNSGGFRPGTPSLHPYRSQPLYLPPGPAPPSA 1890
Score = 32.7 bits (73), Expect = 0.31
Identities = 63/247 (25%), Positives = 87/247 (35%), Gaps = 54/247 (21%)
Query: 26 GTSGH----CRGGKERPARPPPASSHESHVLDNAPAAAR------------EPPPPAPAP 69
G GH G+ERP P A + + ++ P + EP PPAP P
Sbjct: 354 GAEGHRDSQSASGEERP---PEADGKKGNSPNSEPPTPKTAWAETSRPPETEPGPPAPKP 410
Query: 70 RCLRLRPPFPEEGVAAR---PGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPA 126
P P G A PG P G + E E W + + +
Sbjct: 411 PL-----PPPHRGPAGNWGPPGDYP-DRGGPPCKPPAPEDEDE---AWRQRRKQSSSEIS 461
Query: 127 LGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWAQPAGGR 186
L +R R +R Q + + R ++ G + R A+PA
Sbjct: 462 LAVERARRRREEEERRM--QEERRAACAEKLKRLDEKFGAPDK-------RLKAEPA--- 509
Query: 187 APGCAAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAP----RSPPLRLQRYTT 242
AP AAP P P P + A PA PP+SAP+ P ++PP +
Sbjct: 510 APP-AAPSTPAPPPAVPKELPAP------PAPPPASAPTPETEPEEPAQAPPAQSTPTPG 562
Query: 243 AAAAPAL 249
AAAP L
Sbjct: 563 VAAAPTL 569
Score = 32.0 bits (71), Expect = 0.53
Identities = 53/194 (27%), Positives = 64/194 (32%), Gaps = 26/194 (13%)
Query: 38 PARPPPASSHESHVLDNAPAAAREPPPP-APAPRCLRLRPPFPEEGVAARPGSCPVGWGA 96
P P P S + L PA PPPP A P L PP P R P
Sbjct: 673 PPTPVPPSPPQPVTLGAVPAPQAPPPPPKALYPGALGRPPPMPPMNFDPRWMMIPPYVDP 732
Query: 97 RKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGKRADGQAQGQLRLPPS 156
R L+G L V + L +P D G P + A + + PP
Sbjct: 733 RLLQGRPPLDFYPPGVHPSGL------VPRERSDSGGSSSEPFDRHAPAMLR-ERGTPPV 785
Query: 157 TPRAPDRGG------CEPRAPRSQELRSWAQPAGGRAPGCAAPWVPQCHPLPPGQSSAER 210
P+ G EPR P + LR A + P VP P PP
Sbjct: 786 DPKLAWVGDVFTATPAEPR-PLTSPLRQ-AADEDDKGMRSETPPVP---PPPP------- 833
Query: 211 YRALCPALPPSSAP 224
Y A P P + AP
Sbjct: 834 YLASYPGFPENGAP 847
>gi|71274172 ankyrin repeat domain 56 [Homo sapiens]
Length = 793
Score = 43.9 bits (102), Expect = 1e-04
Identities = 58/209 (27%), Positives = 73/209 (34%), Gaps = 26/209 (12%)
Query: 34 GKERPARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPFPEE---GVAARPGSC 90
G +RP PP A+ +P AR PP PR R R PEE G AAR
Sbjct: 85 GLQRPREPPAAAPSAGGAAPCSPRGARRGEPPQQQPR-RRRREKEPEEEPAGAAARAADA 143
Query: 91 PV----GWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGKRADGQ 146
G +R+ G G +G P +PA R S + G+
Sbjct: 144 ACNGLPGSDSRRAPGKGGGSKGS--------PGQRPPVPAAAAAGAQARASCAAAKTQGR 195
Query: 147 AQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWAQPAGG-------RAPGCAA--PWVPQ 197
+ L + P G P + ++E + A PA R G A VP
Sbjct: 196 CCWEC-LQNNLAVLPGELGALPHSATAEEKPARALPAQDDRGASREREEGALAEPAPVPA 254
Query: 198 CHPLPPGQSSAERYRALCPALPPSSAPSG 226
PP A RA PAL P AP G
Sbjct: 255 VAHSPPATVEAATSRASPPALLPGPAPRG 283
>gi|113427525 PREDICTED: similar to hCG2037003 [Homo sapiens]
Length = 196
Score = 43.5 bits (101), Expect = 2e-04
Identities = 51/176 (28%), Positives = 67/176 (38%), Gaps = 28/176 (15%)
Query: 43 PASSHESHVLDNAPAAAREPPPPAPAPRCL-RLRPPFPE-----------EGV-AARPGS 89
PA + +L N E PPPAPAP RLR P P+ +G+ PGS
Sbjct: 4 PARIPCNKILTNDGPPGPETPPPAPAPTARPRLRLPAPDWRARRADLTRRKGLRRGEPGS 63
Query: 90 CPVGWG---ARKLE----GTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGKR 142
+G G AR+ + T GEG + A P + P+L D GR + G
Sbjct: 64 RGLGEGPAAARRPQVQSIDTTPSGEGAPSFSRAQRPGRSGPSPSLASDPAPGRGAAWGSL 123
Query: 143 ADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWAQPAGGRAPGCAAPWVPQC 198
G+ Q L + GG R R+ E+R G PG P C
Sbjct: 124 RPGKRQQALE--------SEAGGRASREARAAEVRERIPGGGSWCPGRRDWLTPPC 171
>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor [Homo
sapiens]
Length = 1336
Score = 43.5 bits (101), Expect = 2e-04
Identities = 56/192 (29%), Positives = 71/192 (36%), Gaps = 39/192 (20%)
Query: 55 APAAAREPPPPAPAPRCLRLRPPFPEEGVAARPGSCPV---------GWGARKLEGTGVL 105
AP A+ PPPP P P P +P A PG P W R+ +G G
Sbjct: 902 APPPAKPPPPPQPLP-----SPAYPAPRPA--PGPAPFVPRERASVDRW--RRTKGAGPP 952
Query: 106 GEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGKRADGQAQGQLRLPPST--PRAPDR 163
G G L + G E LG G R +P G A G+ PP+ P+ P
Sbjct: 953 G-GAGLADGFHRYYGPIEPQGLGLGLGEARAAPRG------AAGRPLSPPAAQPPQKP-- 1003
Query: 164 GGCEPRAPRSQELRSWAQPAGGRAPGCAAPWVPQCHPLPPGQSSAERYRALCP-ALPPSS 222
P + A+P G PG +P P PP ++ LC A S
Sbjct: 1004 ---PPSYFAIVRDKEPAEPPAGAFPGFPSP------PAPPAAAATAVGPPLCRLAFEDES 1054
Query: 223 APSGAEAPRSPP 234
P+ A PRS P
Sbjct: 1055 PPAPARWPRSDP 1066
Score = 28.1 bits (61), Expect = 7.7
Identities = 28/94 (29%), Positives = 32/94 (34%), Gaps = 20/94 (21%)
Query: 32 RGGKERPARPP-------PASSHESHVLDNAPAAAREPP---------PPAP-APRCLRL 74
RG RP PP P S+ + V D PA EPP PPAP A +
Sbjct: 985 RGAAGRPLSPPAAQPPQKPPPSYFAIVRDKEPA---EPPAGAFPGFPSPPAPPAAAATAV 1041
Query: 75 RPPFPEEGVAARPGSCPVGWGARKLEGTGVLGEG 108
PP P W E +LG G
Sbjct: 1042 GPPLCRLAFEDESPPAPARWPRSDPESQPLLGPG 1075
>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
sapiens]
Length = 247
Score = 43.5 bits (101), Expect = 2e-04
Identities = 39/147 (26%), Positives = 55/147 (37%), Gaps = 29/147 (19%)
Query: 37 RPARPPPASSHESHVLDNAPAAAREPPP------PAPAPRCLRLRPPFPEEGVAARPGSC 90
+P RPPP ++SH P PPP P P + P P+EG +R
Sbjct: 119 KPERPPPQGGNQSHRPPPPPGKPERPPPQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARS 178
Query: 91 PVG--WGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGKRADGQAQ 148
P G G + EG N PQG P G+ +G + ++
Sbjct: 179 PPGKPQGPPQQEG--------------NKPQGP---PPPGKPQGPPPAGGNPQQPQAPPA 221
Query: 149 GQLRLPPSTPRAPDRGGCEPRAPRSQE 175
G+ P P P +GG PR + Q+
Sbjct: 222 GK----PQGPPPPPQGGRPPRPAQGQQ 244
Score = 35.0 bits (79), Expect = 0.063
Identities = 52/212 (24%), Positives = 71/212 (33%), Gaps = 36/212 (16%)
Query: 32 RGGKERPARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPP---FPEEGVAARPG 88
+GG + PPP + + PPPP RPP +G PG
Sbjct: 42 QGGNQPQRPPPPPGKPQGPPPQGGNQSQGPPPPPGKPEG----RPPQGGNQSQGPPPHPG 97
Query: 89 --SCPVGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGK--RAD 144
P G + +GT P E P G ++ P GK R
Sbjct: 98 KPERPPPQGGNQSQGT------------PPPPGKPERPPPQGGNQSHRPPPPPGKPERPP 145
Query: 145 GQAQGQLRLPPSTPRAPD----RGGCEPRAPRSQELRSWAQP--AGGRAPGCAAPWVPQC 198
Q Q + PP P P+ + G + R+ RS + P G + G P PQ
Sbjct: 146 PQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPGKPQ- 204
Query: 199 HPLPPGQSSAERYRALCPALPPSSAPSGAEAP 230
P P G + + P PP+ P G P
Sbjct: 205 GPPPAGGNPQQ------PQAPPAGKPQGPPPP 230
Score = 33.5 bits (75), Expect = 0.18
Identities = 50/233 (21%), Positives = 66/233 (28%), Gaps = 49/233 (21%)
Query: 4 LRAGLNGSEWVGWSYVFYPVTPGTSGHCRGGKERPARPPPASSHESHVLDNAPAAAREPP 63
L + + SE V + ++ G G +P RPPP ++ PP
Sbjct: 13 LSSAESSSEDVSQEESLFLISGKPEGRRPQGGNQPQRPPPPPGKPQGPPPQGGNQSQGPP 72
Query: 64 PPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQGNEE 123
PP P RPP +G G P P E
Sbjct: 73 PPPGKPEG---RPP---QGGNQSQGPPPH-------------------------PGKPER 101
Query: 124 LPALGRDRGAGRMSPHGK--RADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWAQ 181
P G ++ G P GK R Q Q PP P P+R
Sbjct: 102 PPPQGGNQSQGTPPPPGKPERPPPQGGNQSHRPPPPPGKPER----------------PP 145
Query: 182 PAGGRAPGCAAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPP 234
P GG P + PP + + R P P P+ PP
Sbjct: 146 PQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPP 198
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.134 0.443
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,764,646
Number of Sequences: 37866
Number of extensions: 1142201
Number of successful extensions: 10233
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 914
Number of HSP's that attempted gapping in prelim test: 7278
Number of HSP's gapped (non-prelim): 3246
length of query: 254
length of database: 18,247,518
effective HSP length: 100
effective length of query: 154
effective length of database: 14,460,918
effective search space: 2226981372
effective search space used: 2226981372
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.