Guide to the Human Genome
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Search of human proteins with 239741949

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239741949 PREDICTED: hypothetical protein XP_002342360 [Homo
sapiens]
         (254 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239753493 PREDICTED: hypothetical protein [Homo sapiens]           543   e-155
gi|239748056 PREDICTED: hypothetical protein XP_002346522 [Homo ...   543   e-155
gi|239741949 PREDICTED: hypothetical protein XP_002342360 [Homo ...   543   e-155
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre...    51   9e-07
gi|18079216 CASK interacting protein 1 [Homo sapiens]                  50   1e-06
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]     50   2e-06
gi|239753721 PREDICTED: hypothetical protein [Homo sapiens]            48   7e-06
gi|239748254 PREDICTED: hypothetical protein XP_002346600 [Homo ...    48   7e-06
gi|239742155 PREDICTED: hypothetical protein XP_002342442 [Homo ...    48   7e-06
gi|163965366 nascent polypeptide-associated complex alpha subuni...    48   7e-06
gi|62988361 absent in melanoma 1 [Homo sapiens]                        48   9e-06
gi|4885407 hyperpolarization activated cyclic nucleotide-gated p...    47   2e-05
gi|21704281 junctophilin 2 isoform 1 [Homo sapiens]                    47   2e-05
gi|110832843 TBP-associated factor 4 [Homo sapiens]                    47   2e-05
gi|189181750 human immunodeficiency virus type I enhancer bindin...    47   2e-05
gi|116089331 human immunodeficiency virus type I enhancer bindin...    46   3e-05
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo...    46   4e-05
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ...    46   4e-05
gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens]         46   4e-05
gi|112421108 capicua homolog [Homo sapiens]                            46   4e-05
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]                     44   1e-04
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]                     44   1e-04
gi|239757467 PREDICTED: hypothetical protein [Homo sapiens]            44   1e-04
gi|239751993 PREDICTED: hypothetical protein [Homo sapiens]            44   1e-04
gi|239746476 PREDICTED: hypothetical protein [Homo sapiens]            44   1e-04
gi|149158690 HLA-B associated transcript-2 [Homo sapiens]              44   1e-04
gi|71274172 ankyrin repeat domain 56 [Homo sapiens]                    44   1e-04
gi|113427525 PREDICTED: similar to hCG2037003 [Homo sapiens]           44   2e-04
gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor ...    44   2e-04
gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Ho...    44   2e-04

>gi|239753493 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 254

 Score =  543 bits (1398), Expect = e-155
 Identities = 254/254 (100%), Positives = 254/254 (100%)

Query: 1   MERLRAGLNGSEWVGWSYVFYPVTPGTSGHCRGGKERPARPPPASSHESHVLDNAPAAAR 60
           MERLRAGLNGSEWVGWSYVFYPVTPGTSGHCRGGKERPARPPPASSHESHVLDNAPAAAR
Sbjct: 1   MERLRAGLNGSEWVGWSYVFYPVTPGTSGHCRGGKERPARPPPASSHESHVLDNAPAAAR 60

Query: 61  EPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQG 120
           EPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQG
Sbjct: 61  EPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQG 120

Query: 121 NEELPALGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWA 180
           NEELPALGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWA
Sbjct: 121 NEELPALGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWA 180

Query: 181 QPAGGRAPGCAAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPPLRLQRY 240
           QPAGGRAPGCAAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPPLRLQRY
Sbjct: 181 QPAGGRAPGCAAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPPLRLQRY 240

Query: 241 TTAAAAPALQQRRA 254
           TTAAAAPALQQRRA
Sbjct: 241 TTAAAAPALQQRRA 254


>gi|239748056 PREDICTED: hypothetical protein XP_002346522 [Homo
           sapiens]
          Length = 254

 Score =  543 bits (1398), Expect = e-155
 Identities = 254/254 (100%), Positives = 254/254 (100%)

Query: 1   MERLRAGLNGSEWVGWSYVFYPVTPGTSGHCRGGKERPARPPPASSHESHVLDNAPAAAR 60
           MERLRAGLNGSEWVGWSYVFYPVTPGTSGHCRGGKERPARPPPASSHESHVLDNAPAAAR
Sbjct: 1   MERLRAGLNGSEWVGWSYVFYPVTPGTSGHCRGGKERPARPPPASSHESHVLDNAPAAAR 60

Query: 61  EPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQG 120
           EPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQG
Sbjct: 61  EPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQG 120

Query: 121 NEELPALGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWA 180
           NEELPALGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWA
Sbjct: 121 NEELPALGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWA 180

Query: 181 QPAGGRAPGCAAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPPLRLQRY 240
           QPAGGRAPGCAAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPPLRLQRY
Sbjct: 181 QPAGGRAPGCAAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPPLRLQRY 240

Query: 241 TTAAAAPALQQRRA 254
           TTAAAAPALQQRRA
Sbjct: 241 TTAAAAPALQQRRA 254


>gi|239741949 PREDICTED: hypothetical protein XP_002342360 [Homo
           sapiens]
          Length = 254

 Score =  543 bits (1398), Expect = e-155
 Identities = 254/254 (100%), Positives = 254/254 (100%)

Query: 1   MERLRAGLNGSEWVGWSYVFYPVTPGTSGHCRGGKERPARPPPASSHESHVLDNAPAAAR 60
           MERLRAGLNGSEWVGWSYVFYPVTPGTSGHCRGGKERPARPPPASSHESHVLDNAPAAAR
Sbjct: 1   MERLRAGLNGSEWVGWSYVFYPVTPGTSGHCRGGKERPARPPPASSHESHVLDNAPAAAR 60

Query: 61  EPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQG 120
           EPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQG
Sbjct: 61  EPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQG 120

Query: 121 NEELPALGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWA 180
           NEELPALGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWA
Sbjct: 121 NEELPALGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWA 180

Query: 181 QPAGGRAPGCAAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPPLRLQRY 240
           QPAGGRAPGCAAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPPLRLQRY
Sbjct: 181 QPAGGRAPGCAAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPPLRLQRY 240

Query: 241 TTAAAAPALQQRRA 254
           TTAAAAPALQQRRA
Sbjct: 241 TTAAAAPALQQRRA 254


>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
           preproprotein [Homo sapiens]
          Length = 331

 Score = 51.2 bits (121), Expect = 9e-07
 Identities = 60/217 (27%), Positives = 75/217 (34%), Gaps = 37/217 (17%)

Query: 22  PVTPGT-SGHCRGGKERPARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPFPE 80
           P  PG   G    G  +P  PPP            P   + PPP     R  R  PP   
Sbjct: 51  PPPPGKPQGPPPQGGNKPQGPPP------------PGKPQGPPPQGDKSRSPR-SPPGKP 97

Query: 81  EGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHG 140
           +G   + G+ P G      +  G   +G       N PQG    P  G+        P G
Sbjct: 98  QGPPPQGGNQPQGPPPPPGKPQGPPPQG------GNRPQGP---PPPGK--------PQG 140

Query: 141 KRADGQAQGQLRLPPSTPRAPD-RGGCEPRAPRSQELRSWAQPA-GGRAP-GCAAPWVPQ 197
               G      R PP  P+ P  +GG +P+ P     +    P  GG+ P G   P  PQ
Sbjct: 141 PPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGKKPQGPPPPGKPQ 200

Query: 198 CHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPP 234
               PP Q    R     P  P    P G   P+ PP
Sbjct: 201 G---PPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPP 234



 Score = 42.0 bits (97), Expect = 5e-04
 Identities = 56/217 (25%), Positives = 79/217 (36%), Gaps = 53/217 (24%)

Query: 37  RPARPPPASSHESHVLDNAPAAAREPPP-----PAPAPRCLRLRPPFPEEGVAARPGSCP 91
           +P  PPP   ++       P   + PPP     P   P   + + P P +G  +R    P
Sbjct: 96  KPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGP-PPQGDKSRSPRSP 154

Query: 92  VGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGA---GRMSPHGKRADGQAQ 148
            G    K +G    G         N PQG    P  G+ +G    G   P G    G+ Q
Sbjct: 155 PG----KPQGPPPQG--------GNQPQGPPPPP--GKPQGPPPQGGKKPQGPPPPGKPQ 200

Query: 149 G---------QLRLPPSTPRAPD-RGGCEPRAPRSQELRSWAQPA-GGRAPGCAAPWVPQ 197
           G           + PP  P+ P  +GG +P+ P     +    P  GG  P         
Sbjct: 201 GPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQ-------- 252

Query: 198 CHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPP 234
             P PPG+          P  PP+   S +++ RSPP
Sbjct: 253 -GPPPPGK----------PQGPPAQGGSKSQSARSPP 278



 Score = 41.6 bits (96), Expect = 7e-04
 Identities = 49/184 (26%), Positives = 68/184 (36%), Gaps = 33/184 (17%)

Query: 55  APAAAREPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTW 114
           +P    +P  P P P   +  PP   +G     G  P G      +  G   +G+K  + 
Sbjct: 40  SPQGGNKPQGPPPPPGKPQGPPP---QGGNKPQGPPPPG------KPQGPPPQGDKSRSP 90

Query: 115 ANLPQGNEELPALGRDRGAGRMSPHGKRADGQAQGQLRL----PPSTPRAPDRGGCEPRA 170
            + P   +  P  G ++  G   P GK      QG  R     PP  P+ P   G + R+
Sbjct: 91  RSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQGPPPQGDKSRS 150

Query: 171 PRSQELRSWAQPAGGRAPGCAAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAP 230
           PRS   +    P  G          PQ  P PPG+          P  PP   P G + P
Sbjct: 151 PRSPPGKPQGPPPQGGNQ-------PQGPPPPPGK----------PQGPP---PQGGKKP 190

Query: 231 RSPP 234
           + PP
Sbjct: 191 QGPP 194



 Score = 41.6 bits (96), Expect = 7e-04
 Identities = 54/216 (25%), Positives = 77/216 (35%), Gaps = 27/216 (12%)

Query: 25  PGTSGHCRGGKERPARP--PPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPFPEEG 82
           P   G+   G   P +P  PP    +S    + P   + PPP           PP   +G
Sbjct: 61  PPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQG 120

Query: 83  VAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGKR 142
              + G+ P G      +  G   +G+K  +  + P   +  P  G ++  G   P GK 
Sbjct: 121 PPPQGGNRPQG-PPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKP 179

Query: 143 ADGQAQG----QLRLPPSTPRAPDRGGCEPRAPRSQELRSWAQPAGGRAPGCAAPWVPQC 198
                QG    Q   PP  P+ P   G + R+ +S   +    P  G          PQ 
Sbjct: 180 QGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQ-------PQG 232

Query: 199 HPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPP 234
            P PPG+          P  PP   P G   P+ PP
Sbjct: 233 PPPPPGK----------PQGPP---PQGGNKPQGPP 255


>gi|18079216 CASK interacting protein 1 [Homo sapiens]
          Length = 1431

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 69/230 (30%), Positives = 85/230 (36%), Gaps = 45/230 (19%)

Query: 35   KER---PARPPPASSHESHV--LDNAPAAARE-------PPPPA-PAPRCLRLRPPFPE- 80
            KER   P  PPP S + +    +   PA+ +        PPPPA P P  L   PP P  
Sbjct: 1155 KEREAGPEPPPPLSVYHNGTGTVRRRPASEQAGPPELPPPPPPAEPPPTDLAHLPPLPPP 1214

Query: 81   EGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHG 140
            EG A +P   PV       +    L +G    T   +P     LP  G        SP  
Sbjct: 1215 EGEARKPAKPPVSPKPVLTQPVPKL-QGSPTPTSKKVP-----LPGPG--------SPEV 1260

Query: 141  KRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWAQPAGGRAPGCA---APWVPQ 197
            KRA G        PP +P+ P      P AP+  +  +   P+G   P  A   A   P 
Sbjct: 1261 KRAHGTP------PPVSPKPPP----PPTAPKPVKAVA-GLPSGSAGPSPAPSPARQPPA 1309

Query: 198  CHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPPLRLQRYTTAAAAP 247
                PPG   +       PA PPS        P  PP        AAAAP
Sbjct: 1310 ALAKPPGTPPS---LGASPAKPPSPGAPALHVPAKPPRAAAAAAAAAAAP 1356


>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
          Length = 416

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 58/219 (26%), Positives = 81/219 (36%), Gaps = 38/219 (17%)

Query: 37  RPARPPPASSHESHVLDNAPAAAREPPP-----PAPAPRCLRLRPPFPEEGVAARPGSCP 91
           +P  PPP   ++       P   + PPP     P   P   + + P P +G  +R    P
Sbjct: 56  KPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGP-PPQGDKSRSPRSP 114

Query: 92  VGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRG---AGRMSPHGKRADGQAQ 148
            G    K +G    G         N PQG    P  G+ +G    G   P G    G+ Q
Sbjct: 115 PG----KPQGPPPQG--------GNQPQGPP--PPPGKPQGPPPQGGNKPQGPPPPGKPQ 160

Query: 149 G----------QLRLPPSTPRA-PDRGGCEPRAPRSQELRSWAQP--AGGRAPGCAAPWV 195
           G            R PP  P+  P +GG +P+ P     +    P   G +  G   P  
Sbjct: 161 GPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGK 220

Query: 196 PQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPP 234
           PQ  P P G + ++  R+  P  P    P G   P+ PP
Sbjct: 221 PQ-GPPPQGDNKSQSARS-PPGKPQGPPPQGGNQPQGPP 257



 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 54/204 (26%), Positives = 75/204 (36%), Gaps = 27/204 (13%)

Query: 37  RPARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGA 96
           +P  PPP   ++S    + P   + PPP           PP   +G   + G+ P G   
Sbjct: 158 KPQGPPPQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQG-PP 216

Query: 97  RKLEGTGVLGEGEKLVTWANLPQGNEE-LPALGRDRGAGRMSPHGKRADGQAQG----QL 151
              +  G   +G+     A  P G  +  P  G ++  G   P GK      QG    Q 
Sbjct: 217 PPGKPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQG 276

Query: 152 RLPPSTPRA-PDRGGCEPRAPRSQELRSWAQPAGGRAPGCAAPWVPQCHPLPPGQSSAER 210
             PP  P+  P +GG + R+ RS   +    P  G          PQ  P PPG+     
Sbjct: 277 PPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQ-------PQGPPPPPGK----- 324

Query: 211 YRALCPALPPSSAPSGAEAPRSPP 234
                P  PP   P G   P+ PP
Sbjct: 325 -----PQGPP---PQGGNKPQGPP 340



 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 53/206 (25%), Positives = 70/206 (33%), Gaps = 38/206 (18%)

Query: 37  RPARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGA 96
           +P  PPP   ++S    + P   + PPP           PP   +G        P   G 
Sbjct: 220 KPQGPPPQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQG--------PPPQGG 271

Query: 97  RKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGKRADGQAQG--QLRLP 154
            K +G    G+          PQG    P  G  +     SP GK      QG  Q + P
Sbjct: 272 NKPQGPPPPGK----------PQGP---PPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGP 318

Query: 155 PSTPRAPD----RGGCEPRAPRSQELRSWAQPAGGRAPGCA--APWVPQCHPLPPGQSSA 208
           P  P  P     +GG +P+ P          P GG     A   P  PQ  P   G +  
Sbjct: 319 PPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNN-- 376

Query: 209 ERYRALCPALPPSSAPSGAEAPRSPP 234
                  P  PP  A    + P++PP
Sbjct: 377 -------PQGPPPPAGGNPQQPQAPP 395



 Score = 42.4 bits (98), Expect = 4e-04
 Identities = 58/234 (24%), Positives = 80/234 (34%), Gaps = 37/234 (15%)

Query: 22  PVTPGTSGHCRGGKERPARPPPASSHESHVLDNAPAAAREPPP-----PAPAPRCLRLRP 76
           P     S   R    +P  PPP   ++       P   + PPP     P   P   + + 
Sbjct: 164 PQGDNKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQG 223

Query: 77  PFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRG---A 133
           P P+    ++    P G    K +G    G         N PQG    P  G+ +G    
Sbjct: 224 PPPQGDNKSQSARSPPG----KPQGPPPQG--------GNQPQGPP--PPPGKPQGPPPQ 269

Query: 134 GRMSPHGKRADGQAQG----------QLRLPPSTPRA-PDRGGCEPRAPRSQELRSWAQP 182
           G   P G    G+ QG            R PP  P+  P +GG +P+ P     +    P
Sbjct: 270 GGNKPQGPPPPGKPQGPPPQGGSKSRSSRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPP 329

Query: 183 --AGGRAPGCAAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPP 234
              G +  G   P  PQ  P P G S +   R+  P  P          P+ PP
Sbjct: 330 PQGGNKPQGPPPPGKPQ-GPPPQGGSKSRSARS-PPGKPQGPPQQEGNNPQGPP 381



 Score = 41.2 bits (95), Expect = 9e-04
 Identities = 53/215 (24%), Positives = 71/215 (33%), Gaps = 41/215 (19%)

Query: 22  PVTPGTSGHCRGGKERPARPPPASSHESHVLDNAPAAAREPPP-----PAPAPRCLRLRP 76
           P     S   R    +P  PPP   ++       P   + PPP     P   P   + + 
Sbjct: 226 PQGDNKSQSARSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQG 285

Query: 77  PFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRM 136
           P P+ G  +R    P G    K +G    G         N PQG    P           
Sbjct: 286 PPPQGGSKSRSSRSPPG----KPQGPPPQG--------GNQPQGPPPPPG---------- 323

Query: 137 SPHGKRADGQAQGQLRLPPSTPRA-PDRGGCEPRAPRSQELRSWAQPAGGRAPGCAAPWV 195
            P G    G  + Q   PP  P+  P +GG + R+ RS        P   + P       
Sbjct: 324 KPQGPPPQGGNKPQGPPPPGKPQGPPPQGGSKSRSARS-------PPGKPQGPPQQEGNN 376

Query: 196 PQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAP 230
           PQ  P P G +  +      P  PP+  P G   P
Sbjct: 377 PQGPPPPAGGNPQQ------PQAPPAGQPQGPPRP 405



 Score = 31.6 bits (70), Expect = 0.70
 Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 2/77 (2%)

Query: 160 APDRGGCEPRAPRSQELRSWAQPAGGRAPGCAAPWVPQCHPLPPGQSSAERYRALCPALP 219
           AP +GG +P+ P S   +    P  G       P  P     PP Q   +      P  P
Sbjct: 39  APPQGGNKPQGPPSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKP 98

Query: 220 PSSAPSG--AEAPRSPP 234
               P G  + +PRSPP
Sbjct: 99  QGPPPQGDKSRSPRSPP 115


>gi|239753721 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 342

 Score = 48.1 bits (113), Expect = 7e-06
 Identities = 59/211 (27%), Positives = 74/211 (35%), Gaps = 29/211 (13%)

Query: 3   RLRAGLNGSEWVGWSYVFYPVTPGTSGHCRGGKERPAR----PPPASSHESHV---LDNA 55
           RLR G  G  W        P+       C G +  P R      P +         L  A
Sbjct: 150 RLRGGRGG--WSPAPKAGSPMAAAPGRTCEGKRTAPRRMLLPDSPYAGRPQRARTSLCAA 207

Query: 56  PAAAREPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWA 115
           PA+ R P P   APR L  RP  P    AA  GS  +   A++ +     G G +     
Sbjct: 208 PASRRPPAPTVAAPRGLETRPALPRRAGAAVHGSEGLALRAKRRDANA--GSGARRC--- 262

Query: 116 NLPQGNEELP---ALGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPR 172
                  ELP    L    G G M    +R   +   ++   PS PR P    C+P    
Sbjct: 263 ------RELPESWILRAAAGLGPMFLLSERVGDEVWAEIPCRPSAPRFPRGRHCQPLRAL 316

Query: 173 SQELRSWAQPAGGRAPGCAAPWVPQCHPLPP 203
              LR  A   GGR     AP+    HP  P
Sbjct: 317 RTPLRPGA--VGGR----GAPFSGFRHPARP 341


>gi|239748254 PREDICTED: hypothetical protein XP_002346600 [Homo
           sapiens]
          Length = 342

 Score = 48.1 bits (113), Expect = 7e-06
 Identities = 59/211 (27%), Positives = 74/211 (35%), Gaps = 29/211 (13%)

Query: 3   RLRAGLNGSEWVGWSYVFYPVTPGTSGHCRGGKERPAR----PPPASSHESHV---LDNA 55
           RLR G  G  W        P+       C G +  P R      P +         L  A
Sbjct: 150 RLRGGRGG--WSPAPKAGSPMAAAPGRTCEGKRTAPRRMLLPDSPYAGRPQRARTSLCAA 207

Query: 56  PAAAREPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWA 115
           PA+ R P P   APR L  RP  P    AA  GS  +   A++ +     G G +     
Sbjct: 208 PASRRPPAPTVAAPRGLETRPALPRRAGAAVHGSEGLALRAKRRDANA--GSGARRC--- 262

Query: 116 NLPQGNEELP---ALGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPR 172
                  ELP    L    G G M    +R   +   ++   PS PR P    C+P    
Sbjct: 263 ------RELPESWILRAAAGLGPMFLLSERVGDEVWAEIPCRPSAPRFPRGRHCQPLRAL 316

Query: 173 SQELRSWAQPAGGRAPGCAAPWVPQCHPLPP 203
              LR  A   GGR     AP+    HP  P
Sbjct: 317 RTPLRPGA--VGGR----GAPFSGFRHPARP 341


>gi|239742155 PREDICTED: hypothetical protein XP_002342442 [Homo
           sapiens]
          Length = 342

 Score = 48.1 bits (113), Expect = 7e-06
 Identities = 59/211 (27%), Positives = 74/211 (35%), Gaps = 29/211 (13%)

Query: 3   RLRAGLNGSEWVGWSYVFYPVTPGTSGHCRGGKERPAR----PPPASSHESHV---LDNA 55
           RLR G  G  W        P+       C G +  P R      P +         L  A
Sbjct: 150 RLRGGRGG--WSPAPKAGSPMAAAPGRTCEGKRTAPRRMLLPDSPYAGRPQRARTSLCAA 207

Query: 56  PAAAREPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWA 115
           PA+ R P P   APR L  RP  P    AA  GS  +   A++ +     G G +     
Sbjct: 208 PASRRPPAPTVAAPRGLETRPALPRRAGAAVHGSEGLALRAKRRDANA--GSGARRC--- 262

Query: 116 NLPQGNEELP---ALGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPR 172
                  ELP    L    G G M    +R   +   ++   PS PR P    C+P    
Sbjct: 263 ------RELPESWILRAAAGLGPMFLLSERVGDEVWAEIPCRPSAPRFPRGRHCQPLRAL 316

Query: 173 SQELRSWAQPAGGRAPGCAAPWVPQCHPLPP 203
              LR  A   GGR     AP+    HP  P
Sbjct: 317 RTPLRPGA--VGGR----GAPFSGFRHPARP 341


>gi|163965366 nascent polypeptide-associated complex alpha subunit
            isoform a [Homo sapiens]
          Length = 2078

 Score = 48.1 bits (113), Expect = 7e-06
 Identities = 66/240 (27%), Positives = 84/240 (35%), Gaps = 32/240 (13%)

Query: 22   PVTPG-TSGHCRGGKERP----ARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRP 76
            P TP  T    +GG   P    A  PPA++  S      P      P P  AP      P
Sbjct: 1057 PTTPAATLPSPKGGPATPSLKGAPTPPAATPPS------PKGGPATPSPKGAPMPPAATP 1110

Query: 77   PFPEEGVAARPGS-CPVGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGR 135
            P P+ G+A  P    P    A      G L            P+G    PA      A  
Sbjct: 1111 PSPKGGLATPPHKGAPTTPAATPPSPKGGLATPP--------PKGAPTTPA------ATP 1156

Query: 136  MSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWA---QPAGGRAPGC-- 190
             SP G  A    +G    P +TP +P +GG    +P+       A    P GG A     
Sbjct: 1157 PSPKGGLATPPPKGAPTTPAATPPSP-KGGLATPSPKGAPTTPAATPPSPKGGLATPSPK 1215

Query: 191  AAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPPLRLQRYTTAAAAPALQ 250
             AP  P   P  P    A       P  P ++ PS    P +PP +      AA  P+L+
Sbjct: 1216 GAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLK 1275



 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 59/229 (25%), Positives = 75/229 (32%), Gaps = 43/229 (18%)

Query: 25   PGTSGHCRGGKERPARP-------PPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPP 77
            P  S   +G K+ PA         P  +   S V   +P     PP   P P  + L  P
Sbjct: 837  PENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNL--P 894

Query: 78   FPEEGVAA-----RPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRG 132
            FP+EG A       P         +K   T       K +  +  P+G    PA      
Sbjct: 895  FPKEGPATPAPKQAPALSMTSSSPKKARAT----PAPKGIPASPSPKGAPTPPA------ 944

Query: 133  AGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWAQPAGGRAPGCAA 192
            A   SP G  A    +     P +TP +P  G   P             P G   P  A 
Sbjct: 945  ATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATP------------SPKGAPTPPAAT 992

Query: 193  PWVPQCHPLPPGQSSAERYRALCPALPPSSA-----PSGAEAP--RSPP 234
            P  P+  P  P    A    A+ P  P  S      P GA  P   +PP
Sbjct: 993  PPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPAATPP 1041



 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 59/211 (27%), Positives = 74/211 (35%), Gaps = 35/211 (16%)

Query: 32   RGGKERPARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPFPEEGVAA-RPGSC 90
            +G    PA  PP+           P      PPP  AP      PP P+ G+A   P   
Sbjct: 1123 KGAPTTPAATPPS-----------PKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGA 1171

Query: 91   PVGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGKRADGQAQGQ 150
            P    A      G L            P+G    PA      A   SP G  A    +G 
Sbjct: 1172 PTTPAATPPSPKGGLATPS--------PKGAPTTPA------ATPPSPKGGLATPSPKGA 1217

Query: 151  LRLPPSTPRAPDRGGCEPRAPRSQELRSWA---QPAGGRA--PGCAAPWVPQCHP--LPP 203
               P +TP +P +GG    +P+       A    P GG A  P   AP  P   P  L  
Sbjct: 1218 PTTPAATPPSP-KGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSLKG 1276

Query: 204  GQSSAERYRALCPALPPSSAPSGAEAPRSPP 234
            G ++     A  PA+    +P G  A  SPP
Sbjct: 1277 GLATPPHKGAPNPAVVTPPSPKGGPA-TSPP 1306



 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 62/246 (25%), Positives = 83/246 (33%), Gaps = 36/246 (14%)

Query: 22   PVTPG-TSGHCRGGKERPARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPFPE 80
            P TP  T    +GG   P  PP  +         +P      P P  AP      PP P+
Sbjct: 1149 PTTPAATPPSPKGGLATP--PPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPK 1206

Query: 81   EGVAA-RPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPH 139
             G+A   P   P    A      G L            P+G    PA      A   SP 
Sbjct: 1207 GGLATPSPKGAPTTPAATPPSPKGGLATPS--------PKGAPTTPA------ATPPSPK 1252

Query: 140  GKRADGQAQGQLRLPPSTPRA--------PDRGGCEPRA---PRSQELRSWAQPAGGRAP 188
            G  A    +G    P +TP +        P +G   P     P  +   + + P G   P
Sbjct: 1253 GGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTP 1312

Query: 189  GCAAPWVPQCHPLPPGQSSAERYRALCPALP------PSSAPSGAEAPRSPPLRLQRYTT 242
              A P  P+  P  P    A    A+ P  P      P++ PS    P +P  + +  T 
Sbjct: 1313 PAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSK-EGPTP 1371

Query: 243  AAAAPA 248
             AA P+
Sbjct: 1372 PAATPS 1377



 Score = 42.4 bits (98), Expect = 4e-04
 Identities = 58/236 (24%), Positives = 80/236 (33%), Gaps = 48/236 (20%)

Query: 22   PVTPGTSGHCRGG------KERPARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLR 75
            P  P T+   +GG      KE P  P    SH+       P+  R P  P+P        
Sbjct: 1347 PTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSP-------- 1398

Query: 76   PPFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPA---LGRDRG 132
                 +G    P   P+    +K   T V  EG      A   +G+   PA   +   + 
Sbjct: 1399 -----KGDPTSPAVIPL--SPKKAPATPVTREGA-----ATPSKGDLTPPAVTPVSLKKA 1446

Query: 133  AGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWAQPAGGRAPGCAA 192
                +P G  A   ++G   LP  TP +P     EP AP+     S  + A        A
Sbjct: 1447 PATSAPKGGPATPSSKGDPTLPAVTPPSPK----EPPAPKQVATSSSPKKAPATPAPMGA 1502

Query: 193  PWVPQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPPLR-LQRYTTAAAAP 247
            P +P   P  P +  A               PS    P +P    L + T A  AP
Sbjct: 1503 PTLPAVIPSSPKEVPA--------------TPSSRRDPIAPTATLLSKKTPATLAP 1544



 Score = 41.2 bits (95), Expect = 9e-04
 Identities = 54/220 (24%), Positives = 69/220 (31%), Gaps = 43/220 (19%)

Query: 35   KERPARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGW 94
            KE PA P P  +    +  ++P  AR  P P   P       P P +G    P + P   
Sbjct: 897  KEGPATPAPKQAPALSMTSSSPKKARATPAPKGIP-----ASPSP-KGAPTPPAATPPSP 950

Query: 95   GARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGKRADGQAQGQLRLP 154
                       G       WA  P      PA      A   SP G  A    +G    P
Sbjct: 951  KG---------GPATPSPKWAPTP------PA------ATPPSPKGGPATPSPKGAPTPP 989

Query: 155  PSTPRAPDRGGCEPRAPRSQELRSWAQPAGGRAPGCAAP----WVPQCHPLPPGQSSAER 210
             +TP +P  G   P             P G   P    P      P   P P G S+   
Sbjct: 990  AATPPSPKGGPATP------------SPKGAPTPPAVTPPSPKGSPAATPFPKGASTPPA 1037

Query: 211  YRALCPALPPSSAPSGAEAPRSPPLRLQRYTTAAAAPALQ 250
                 P   P++ P    AP +P   L       A P+L+
Sbjct: 1038 ATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLK 1077



 Score = 35.4 bits (80), Expect = 0.048
 Identities = 49/216 (22%), Positives = 73/216 (33%), Gaps = 21/216 (9%)

Query: 22   PVTPGTSGHCRGGKERPARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPFPEE 81
            P TP + G        P  P    + +     ++P  A   P P  AP    + P  P+E
Sbjct: 1456 PATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKE 1515

Query: 82   GVAARPGS--CPVGWGARKL--EGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMS 137
             V A P S   P+   A  L  +    L   E L+  A      ++ PA+   + A   +
Sbjct: 1516 -VPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKTPAIPTPKEA-PAT 1573

Query: 138  PHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWAQPAGGRAPGCAAPWVPQ 197
            P  K A          PP+   +  +G   P+        +   P     P    P  P+
Sbjct: 1574 PSSKEASS--------PPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPE 1625

Query: 198  CHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSP 233
              P  P            P  PP +  S  ++P SP
Sbjct: 1626 KGPATPAPKGT-------PTSPPVTPSSLKDSPTSP 1654


>gi|62988361 absent in melanoma 1 [Homo sapiens]
          Length = 1723

 Score = 47.8 bits (112), Expect = 9e-06
 Identities = 42/147 (28%), Positives = 56/147 (38%), Gaps = 11/147 (7%)

Query: 24  TPGTSGHCRGGKERPARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPFPEEGV 83
           +PGT G  RG  +R  +PPPASS        + A    P PPA  PR      P  E   
Sbjct: 81  SPGTKGQLRGESDRSKQPPPASSPTKR-KGRSRALEAVPAPPASGPRA-----PAKESPP 134

Query: 84  AARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPH-GKR 142
              P   PV  G     G     E  + +      + +  LP +  +   G +  H   R
Sbjct: 135 KRVPDPSPVTKGTAAESGE----EAARAIPRELPVKSSSLLPEIKPEHKRGPLPNHFNGR 190

Query: 143 ADGQAQGQLRLPPSTPRAPDRGGCEPR 169
           A+G    +L      P A D  G +PR
Sbjct: 191 AEGGRSRELGRAAGAPGASDADGLKPR 217


>gi|4885407 hyperpolarization activated cyclic nucleotide-gated
            potassium channel 4 [Homo sapiens]
          Length = 1203

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 65/239 (27%), Positives = 91/239 (38%), Gaps = 62/239 (25%)

Query: 56   PAAAREPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGA-RKLEGTGVLGEGEKLVT- 113
            P+++  PPP A    C     P P  GVAA   +   G+G   K  G  +      L+T 
Sbjct: 876  PSSSSSPPPGA----CGSPSAPTPSAGVAA---TTIAGFGHFHKALGGSLSSSDSPLLTP 928

Query: 114  ---WANLPQGNEELPALGRDRGA---------------------GRMS-PHGKRADGQAQ 148
                A  PQ  +  PA    RG                      G++  P G+ + G A 
Sbjct: 929  LQPGARSPQAAQPSPAPPGARGGLGLPEHFLPPPPSSRSPSSSPGQLGQPPGELSLGLAT 988

Query: 149  GQLRLPPSTPRAPD--------RGGCEPRAPRSQELRSWAQPAGGRAPGCAAPWVPQCHP 200
            G L  P + PR P+         GG  P             P GG +P   +P  P+  P
Sbjct: 989  GPLSTPETPPRQPEPPSLVAGASGGASPVG---------FTPRGGLSPPGHSPGPPRTFP 1039

Query: 201  LPPGQSSAERYRALCPALPPSSAPSGAEAPR---SPPLRLQRYT-----TAAAAPALQQ 251
              P ++S      L   LPP+S+P   + P+   +PPL   R T      +A+ PAL Q
Sbjct: 1040 SAPPRASGSHGSLL---LPPASSPPPPQVPQRRGTPPLTPGRLTQDLKLISASQPALPQ 1095


>gi|21704281 junctophilin 2 isoform 1 [Homo sapiens]
          Length = 696

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 56/189 (29%), Positives = 71/189 (37%), Gaps = 22/189 (11%)

Query: 53  DNAPAAAREPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGARK-LEGTGVLGEGEKL 111
           D    AA  P PP  +P+      P PE G  +  G+ P     R  +   G+L  G   
Sbjct: 454 DRGAGAAGLPQPPRESPQLHERETPRPEGGSPSPAGTPPQPKRPRPGVSKDGLLSPG--- 510

Query: 112 VTWANLPQGNEELPALGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAP 171
             W   P G E   ++    GAGR SP     +  A   L+ PP    AP R   EP   
Sbjct: 511 -AWNGEPSG-EGSRSVTPSEGAGRRSPARPATERMAIEALQAPP----APSR---EPEVA 561

Query: 172 RSQELRSWAQPAGGRAPGCAAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPS--GAEA 229
             Q   S+A       P    P+  Q  P   G  SA       PA  P  AP+  G E 
Sbjct: 562 LYQGYHSYAVRT---TPPEPPPFEDQPEPEVSGSESAPS----SPATAPLQAPTLRGPEP 614

Query: 230 PRSPPLRLQ 238
            R  P +L+
Sbjct: 615 ARETPAKLE 623


>gi|110832843 TBP-associated factor 4 [Homo sapiens]
          Length = 1085

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 69/238 (28%), Positives = 84/238 (35%), Gaps = 26/238 (10%)

Query: 25  PGTSGHCRGGKERPARPPPASSHESHV-LDNAPAAAREPPPP-------APAPRCLRLRP 76
           P  +G  R G   P RP P S     V    AP AA+  PPP       AP P    +  
Sbjct: 89  PPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAA 148

Query: 77  -PFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGR 135
            P P     A+P   P    AR   G G  G G         P G      L  +  A  
Sbjct: 149 GPEPAPAGPAKPAG-PAALAARAGPGPGP-GPGPGPGPGPGKPAGPGAAQTL--NGSAAL 204

Query: 136 MSPHGKRADGQA----QGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWAQPAGGRAPGCA 191
           ++ H   A   +         LP   P AP   G   + P      +   PA    P   
Sbjct: 205 LNSHHAAAPAVSLVNNGPAALLPLPKPAAP---GTVIQTPPFVGAAAPPAPAAPSPPAAP 261

Query: 192 APWVPQCHPLPPGQSSAERYRAL-CPALPPSSAPSGAEAPRSPPLRLQRYTTAAAAPA 248
           AP  P   P PP  + A   R    PA PP++AP+       PP   Q   +A AAPA
Sbjct: 262 APAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPA-----VPPPAAAQNGGSAGAAPA 314



 Score = 38.5 bits (88), Expect = 0.006
 Identities = 70/260 (26%), Positives = 83/260 (31%), Gaps = 51/260 (19%)

Query: 39  ARPPPASSHESHVLDNAPAA-AREPPPPAPAPRCLRLRPPFPEEG--------------- 82
           A  PPA +  S     APAA A  PPPP PAP  L  RPP    G               
Sbjct: 246 AAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATL-ARPPGHPAGPPTAAPAVPPPAAAQ 304

Query: 83  ----VAARPGSCPVGWGARKLEG------------TGVLGEGEKLVTWANLPQGNEELPA 126
                 A P   P   G   + G             GV  E  K V  A  P   + L A
Sbjct: 305 NGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRVVQA-APPAAQTLAA 363

Query: 127 LGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPRAPD--RGGCEPRAPRSQELRSWAQPAG 184
            G    A  M   G    G       +PP  P  P     G      +S      A  +G
Sbjct: 364 SGPASTAASM-VIGPTMQGALPSPAAVPPPAPGTPTGLPKGAAGAVTQSLSRTPTATTSG 422

Query: 185 GRA---PGCAAPWVP---------QCHPLPPGQSSAERYRALCPALPPSS-APSGAEAPR 231
            RA   P   AP +P         Q   LPPG             +P  + A   A+A  
Sbjct: 423 IRATLTPTVLAPRLPQPPQNPTNIQNFQLPPGMVLVRSENGQLLMIPQQALAQMQAQAHA 482

Query: 232 SPPLRL-QRYTTAAAAPALQ 250
            P   +  R  T  +AP +Q
Sbjct: 483 QPQTTMAPRPATPTSAPPVQ 502



 Score = 32.7 bits (73), Expect = 0.31
 Identities = 57/218 (26%), Positives = 71/218 (32%), Gaps = 26/218 (11%)

Query: 40  RPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPFPEEGVAARPGS---------- 89
           R   A +  +HV+  +PA A    P APA       P  P  G  ARPG           
Sbjct: 51  RAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAG-RARPGGGGPQRPGPPS 109

Query: 90  -----CPVGWG--ARKLE--GTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHG 140
                 P G    A KL     G  G    +   A +  G E  PA G  + AG  +   
Sbjct: 110 PRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPA-GPAKPAGPAALAA 168

Query: 141 KRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQEL---RSWAQPAGGRAPGCAAPWVPQ 197
           +   G   G    P   P  P   G       S  L      A PA        A  +P 
Sbjct: 169 RAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPL 228

Query: 198 CHPLPPGQ--SSAERYRALCPALPPSSAPSGAEAPRSP 233
             P  PG    +     A  P  P + +P  A AP +P
Sbjct: 229 PKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAP 266


>gi|189181750 human immunodeficiency virus type I enhancer binding
            protein 3 b [Homo sapiens]
          Length = 2405

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 59/206 (28%), Positives = 82/206 (39%), Gaps = 44/206 (21%)

Query: 35   KERPARPPPASSHESHVLDNAP---AAAREPPPPAPAPRCLRLRPPFPEEGVAARPGSCP 91
            KE  +RPP A  H     D++P   + AREP   AP+P  L + P           G+ P
Sbjct: 1973 KEAGSRPPLARKHSLTKNDSSPQRCSPAREPQASAPSPPGLHVDP-------GRGMGALP 2025

Query: 92   VGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGKRADGQAQGQL 151
             G    +L    +   G +L   A++    E       D G  R SP  + + GQA+   
Sbjct: 2026 CGSPRLQLSPLTLCPLGRELAPRAHVLSKLEGT----TDPGLPRYSPTRRWSPGQAESPP 2081

Query: 152  RLPP------STPRAPDRG------GCEPR-----APRSQELRSWAQPAGGRAP-GCAAP 193
            R  P      + P +P  G      G +PR     AP   +L S       R+P  CA+P
Sbjct: 2082 RSAPPGKWALAGPGSPSAGEHGPGLGLDPRVLFPPAPLPHKLLS-------RSPETCASP 2134

Query: 194  W-----VPQCHPLPPGQSSAERYRAL 214
            W      P C P P    S+  + AL
Sbjct: 2135 WKAESRSPSCSPGPAHPLSSRPFSAL 2160


>gi|116089331 human immunodeficiency virus type I enhancer binding
            protein 3 [Homo sapiens]
          Length = 2406

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 59/207 (28%), Positives = 82/207 (39%), Gaps = 45/207 (21%)

Query: 35   KERPARPPPASSHESHVLDNAP---AAAREPPPPAPAPRCLRLRPPFPEEGVAARPGSCP 91
            KE  +RPP A  H     D++P   + AREP   AP+P  L + P           G+ P
Sbjct: 1973 KEAGSRPPLARKHSLTKNDSSPQRCSPAREPQASAPSPPGLHVDP-------GRGMGALP 2025

Query: 92   VGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGKRADGQAQGQL 151
             G    +L    +   G +L   A++    E       D G  R SP  + + GQA+   
Sbjct: 2026 CGSPRLQLSPLTLCPLGRELAPRAHVLSKLEGT----TDPGLPRYSPTRRWSPGQAESPP 2081

Query: 152  RLPP------STPRAPDRG------GCEPR-----APRSQELRSWAQPAGGRAP-GCAAP 193
            R  P      + P +P  G      G +PR     AP   +L S       R+P  CA+P
Sbjct: 2082 RSAPPGKWALAGPGSPSAGEHGPGLGLDPRVLFPPAPLPHKLLS-------RSPETCASP 2134

Query: 194  W------VPQCHPLPPGQSSAERYRAL 214
            W       P C P P    S+  + AL
Sbjct: 2135 WQKAESRSPSCSPGPAHPLSSRPFSAL 2161


>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
           sapiens]
          Length = 503

 Score = 45.8 bits (107), Expect = 4e-05
 Identities = 62/232 (26%), Positives = 73/232 (31%), Gaps = 57/232 (24%)

Query: 22  PVTPGTSGHCRGGKERPARPPPA---SSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPF 78
           P  P T       K  P  PP     S H   V    P   + P P  P P      PP 
Sbjct: 250 PPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPP 309

Query: 79  PEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSP 138
           P     +RPG  P+   +                       GN+E P L           
Sbjct: 310 PPP--PSRPGPPPLPPSS----------------------SGNDETPRL----------- 334

Query: 139 HGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWAQPAGGRAPGCAAPWVPQC 198
                    Q  L L  STP  P  G   P  P   E      P     PG + P  P  
Sbjct: 335 --------PQRNLSLSSSTPPLPSPGRSGPLPPPPSER---PPPPVRDPPGRSGPLPPP- 382

Query: 199 HPLPPGQSSAERYRALCPALPPSSAPSGAEAPRS---PPLRLQRYTTAAAAP 247
              PP   +    RAL PA P   + SG ++PRS   PPL   R +  A  P
Sbjct: 383 ---PPVSRNGSTSRAL-PATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPP 430


>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
           sapiens]
          Length = 503

 Score = 45.8 bits (107), Expect = 4e-05
 Identities = 62/232 (26%), Positives = 73/232 (31%), Gaps = 57/232 (24%)

Query: 22  PVTPGTSGHCRGGKERPARPPPA---SSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPF 78
           P  P T       K  P  PP     S H   V    P   + P P  P P      PP 
Sbjct: 250 PPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPP 309

Query: 79  PEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSP 138
           P     +RPG  P+   +                       GN+E P L           
Sbjct: 310 PPP--PSRPGPPPLPPSS----------------------SGNDETPRL----------- 334

Query: 139 HGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWAQPAGGRAPGCAAPWVPQC 198
                    Q  L L  STP  P  G   P  P   E      P     PG + P  P  
Sbjct: 335 --------PQRNLSLSSSTPPLPSPGRSGPLPPPPSER---PPPPVRDPPGRSGPLPPP- 382

Query: 199 HPLPPGQSSAERYRALCPALPPSSAPSGAEAPRS---PPLRLQRYTTAAAAP 247
              PP   +    RAL PA P   + SG ++PRS   PPL   R +  A  P
Sbjct: 383 ---PPVSRNGSTSRAL-PATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPP 430


>gi|187829730 BCL2 binding component 3 isoform 1 [Homo sapiens]
          Length = 261

 Score = 45.8 bits (107), Expect = 4e-05
 Identities = 55/173 (31%), Positives = 62/173 (35%), Gaps = 25/173 (14%)

Query: 22  PVTPGTS--GHCRGGKER-----PARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRL 74
           P TPG    G  RG   R     PARPP A       L   P     P  P PA RCL L
Sbjct: 37  PRTPGGQLPGARRGPGPRRPAPLPARPPGALGSVLRPLRARPGC--RPRRPHPAARCLPL 94

Query: 75  RPPFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKL---------VTWANLPQGN---E 122
           RP  P      RPG  P+ WG+ +       G    L         V  A  P G+    
Sbjct: 95  RPHRPTRR-HRRPGGFPLAWGSPQPAPRPAPGRSSALALAGGAAPGVARAQRPGGSGGRS 153

Query: 123 ELPALGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQE 175
                G  RG G + P G R    A G    P  T RA +  G     P + E
Sbjct: 154 HPGGPGSPRGGGTVGP-GDRGPAAADG--GRPQRTVRAAETRGAAAAPPLTLE 203


>gi|112421108 capicua homolog [Homo sapiens]
          Length = 1608

 Score = 45.8 bits (107), Expect = 4e-05
 Identities = 55/207 (26%), Positives = 75/207 (36%), Gaps = 26/207 (12%)

Query: 37   RPARPPPASSHESHVLDNAPAAAREPP-PPAPAPRCLRLRPPFPEEGVAARPGSCPVGWG 95
            +P++ PP+  +        PAA   P  PPAPA        PFP    +A  GS      
Sbjct: 1110 QPSQAPPSLVYTVATSTTPPAATILPKGPPAPATATPAPTSPFP----SATAGSMTYSLV 1165

Query: 96   ARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRM--------SPHGKRADGQA 147
            A K +        +     A++P G+ E  A GR   A R          P    ++ + 
Sbjct: 1166 APKAQRPSPKAPQKVKAAIASIPVGSFEAGASGRPGPAPRQPLEPGPVREPTAPESELEG 1225

Query: 148  QGQLRLPPSTPRA--PDRGGCEPRAPRSQELRSWAQPA--GGRAPGCAAPWVPQCHPLPP 203
            Q     PP  P    P      P  P ++E  S   P     + P  ++ W        P
Sbjct: 1226 QPTPPAPPPLPETWTPTARSSPPLPPPAEERTSAKGPETMASKFPSSSSDW------RVP 1279

Query: 204  GQSSAERYRALCPALPPSSAPSGAEAP 230
            GQ    R     P  PPS AP+ A AP
Sbjct: 1280 GQGLENRGE---PPTPPSPAPAPAVAP 1303


>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
          Length = 1263

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 60/226 (26%), Positives = 73/226 (32%), Gaps = 38/226 (16%)

Query: 38  PARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGW--- 94
           PA P P  S        AP  +  PPPP P P      PP P     + P S P G    
Sbjct: 575 PAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPP---PPPLPGGVCISSPPSLPGGTAIS 631

Query: 95  ------GARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGKRADGQAQ 148
                 G   +     L EG  + + ++LP G   +P      G+ R+ P      G A 
Sbjct: 632 PPPPLSGDATIPPPPPLPEGVGIPSPSSLP-GGTAIPPPPPLPGSARIPPPPPPLPGSA- 689

Query: 149 GQLRLPPSTPRAPDRGGCEPRAPRSQELRSWAQPAG-GRAPGCAAPWVPQCHPLPPGQSS 207
               +PP  P  P   G  P  P          P G G  P    P  P   P PPG   
Sbjct: 690 ---GIPPPPPPLPGEAGMPPPPP--------PLPGGPGIPPPPPFPGGPGIPPPPPGMGM 738

Query: 208 AERYRALCPALPPSSAPSGAEAPRSPPLRLQRYTTAAAAPALQQRR 253
                       P   P G   P +P L           P +Q RR
Sbjct: 739 ------------PPPPPFGFGVPAAPVLPFGLTPKKLYKPEVQLRR 772



 Score = 32.7 bits (73), Expect = 0.31
 Identities = 23/67 (34%), Positives = 26/67 (38%), Gaps = 16/67 (23%)

Query: 33  GGKERPARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPFP----EEGVAARPG 88
           GG   P  PP             P +AR PPPP P P    + PP P    E G+   P 
Sbjct: 662 GGTAIPPPPP------------LPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPP 709

Query: 89  SCPVGWG 95
             P G G
Sbjct: 710 PLPGGPG 716



 Score = 28.5 bits (62), Expect = 5.9
 Identities = 22/70 (31%), Positives = 25/70 (35%), Gaps = 18/70 (25%)

Query: 22  PVTPGTSGHCRGGKERPARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPFPEE 81
           P  PG++G        P  PPP            P  A  PPPP P P    + PP P  
Sbjct: 683 PPLPGSAGI-------PPPPPPL-----------PGEAGMPPPPPPLPGGPGIPPPPPFP 724

Query: 82  GVAARPGSCP 91
           G    P   P
Sbjct: 725 GGPGIPPPPP 734


>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
          Length = 1272

 Score = 44.3 bits (103), Expect = 1e-04
 Identities = 60/226 (26%), Positives = 73/226 (32%), Gaps = 38/226 (16%)

Query: 38  PARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGW--- 94
           PA P P  S        AP  +  PPPP P P      PP P     + P S P G    
Sbjct: 584 PAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPP---PPPLPGGVCISSPPSLPGGTAIS 640

Query: 95  ------GARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGKRADGQAQ 148
                 G   +     L EG  + + ++LP G   +P      G+ R+ P      G A 
Sbjct: 641 PPPPLSGDATIPPPPPLPEGVGIPSPSSLP-GGTAIPPPPPLPGSARIPPPPPPLPGSA- 698

Query: 149 GQLRLPPSTPRAPDRGGCEPRAPRSQELRSWAQPAG-GRAPGCAAPWVPQCHPLPPGQSS 207
               +PP  P  P   G  P  P          P G G  P    P  P   P PPG   
Sbjct: 699 ---GIPPPPPPLPGEAGMPPPPP--------PLPGGPGIPPPPPFPGGPGIPPPPPGMGM 747

Query: 208 AERYRALCPALPPSSAPSGAEAPRSPPLRLQRYTTAAAAPALQQRR 253
                       P   P G   P +P L           P +Q RR
Sbjct: 748 ------------PPPPPFGFGVPAAPVLPFGLTPKKLYKPEVQLRR 781



 Score = 32.7 bits (73), Expect = 0.31
 Identities = 23/67 (34%), Positives = 26/67 (38%), Gaps = 16/67 (23%)

Query: 33  GGKERPARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPFP----EEGVAARPG 88
           GG   P  PP             P +AR PPPP P P    + PP P    E G+   P 
Sbjct: 671 GGTAIPPPPP------------LPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPP 718

Query: 89  SCPVGWG 95
             P G G
Sbjct: 719 PLPGGPG 725



 Score = 28.5 bits (62), Expect = 5.9
 Identities = 22/70 (31%), Positives = 25/70 (35%), Gaps = 18/70 (25%)

Query: 22  PVTPGTSGHCRGGKERPARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPFPEE 81
           P  PG++G        P  PPP            P  A  PPPP P P    + PP P  
Sbjct: 692 PPLPGSAGI-------PPPPPPL-----------PGEAGMPPPPPPLPGGPGIPPPPPFP 733

Query: 82  GVAARPGSCP 91
           G    P   P
Sbjct: 734 GGPGIPPPPP 743


>gi|239757467 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 278

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 52/166 (31%), Positives = 71/166 (42%), Gaps = 27/166 (16%)

Query: 103 GVLGEGEK----LVTWANL--------PQGNEELPALGRDRGAGRMSPHGKRADGQAQGQ 150
           G  G G++    L+ WA+         P     L ALGRD         G  A+ + + Q
Sbjct: 9   GGRGAGQRVPSVLLAWASWRLLGRIPSPCAGRGLEALGRDW-------RGTVAEPRPEAQ 61

Query: 151 LRLPPSTP-----RAPDRGGCEPRAPRSQELRSWAQPAGGRAPGCAAPWVPQCHPLPPGQ 205
            R+P         R+   GG    AP   E+ S  +PAG  A   AA       P P   
Sbjct: 62  GRVPSFRSNARRVRSVRGGGVTAPAPPDAEVGS-GRPAGLAARAAAAAPRSLRKPSPSPS 120

Query: 206 SSAERYRAL-CPALPPSSAPSGAEAPRSPPLRLQRYTT-AAAAPAL 249
            S  R RA   P + PS +PS + +P   P R  R+TT A+++PAL
Sbjct: 121 PSLRRRRARNSPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSPAL 166


>gi|239751993 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 278

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 52/166 (31%), Positives = 71/166 (42%), Gaps = 27/166 (16%)

Query: 103 GVLGEGEK----LVTWANL--------PQGNEELPALGRDRGAGRMSPHGKRADGQAQGQ 150
           G  G G++    L+ WA+         P     L ALGRD         G  A+ + + Q
Sbjct: 9   GGRGAGQRVPSVLLAWASWRLLGRIPSPCAGRGLEALGRDW-------RGTVAEPRPEAQ 61

Query: 151 LRLPPSTP-----RAPDRGGCEPRAPRSQELRSWAQPAGGRAPGCAAPWVPQCHPLPPGQ 205
            R+P         R+   GG    AP   E+ S  +PAG  A   AA       P P   
Sbjct: 62  GRVPSFRSNARRVRSVRGGGVTAPAPPDAEVGS-GRPAGLAARAAAAAPRSLRKPSPSPS 120

Query: 206 SSAERYRAL-CPALPPSSAPSGAEAPRSPPLRLQRYTT-AAAAPAL 249
            S  R RA   P + PS +PS + +P   P R  R+TT A+++PAL
Sbjct: 121 PSLRRRRARNSPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSPAL 166


>gi|239746476 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 278

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 52/166 (31%), Positives = 71/166 (42%), Gaps = 27/166 (16%)

Query: 103 GVLGEGEK----LVTWANL--------PQGNEELPALGRDRGAGRMSPHGKRADGQAQGQ 150
           G  G G++    L+ WA+         P     L ALGRD         G  A+ + + Q
Sbjct: 9   GGRGAGQRVPSVLLAWASWRLLGCIPSPCAGRGLEALGRDW-------RGTVAEPRPEAQ 61

Query: 151 LRLPPSTP-----RAPDRGGCEPRAPRSQELRSWAQPAGGRAPGCAAPWVPQCHPLPPGQ 205
            R+P         R+   GG    AP   E+ S  +PAG  A   AA       P P   
Sbjct: 62  GRVPSFRSNARRVRSVRGGGVTAPAPPDAEVGS-GRPAGLAARAAAAAPRSLRKPSPSPS 120

Query: 206 SSAERYRAL-CPALPPSSAPSGAEAPRSPPLRLQRYTT-AAAAPAL 249
            S  R RA   P + PS +PS + +P   P R  R+TT A+++PAL
Sbjct: 121 PSLRRRRARNSPGIRPSPSPSPSPSPSPSPARGGRWTTCASSSPAL 166


>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
          Length = 2157

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 50/211 (23%), Positives = 74/211 (35%), Gaps = 31/211 (14%)

Query: 38  PARPPPASSHESHVLDNAPAAAR-EPPPPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGA 96
           PA P P +S      D      R E PP  P P  L   P FPE G    P         
Sbjct: 800 PAEPRPLTSPLRQAADEDDKGMRSETPPVPPPPPYLASYPGFPENGAPGPP--------- 850

Query: 97  RKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGKRADGQAQGQLRLPPS 156
             +    +   G + + W   P G++E+  +         +P  K+   + +      P 
Sbjct: 851 --ISRFPLEEPGPRPLPW---PPGSDEVAKI--------QTPPPKKEPPKEETAQLTGPE 897

Query: 157 TPRAPDRG-GCEPRAPRSQELRSWAQPAGGRAPGCAAPWVPQCHPLPPGQSSAERYRALC 215
             R P RG G   + P      S  +   G  PG +   +P   P  P + +    +   
Sbjct: 898 AGRKPARGVGSGGQGPPPPRRESRTETRWGPRPGSSRRGIPPEEPGAPPRRAGPIKKPPP 957

Query: 216 PA----LPPSSAPSGAEAPRSP---PLRLQR 239
           P     LPP     G E P+ P   PL++ +
Sbjct: 958 PTKVEELPPKPLEQGDETPKPPKPDPLKITK 988



 Score = 36.6 bits (83), Expect = 0.022
 Identities = 65/234 (27%), Positives = 76/234 (32%), Gaps = 55/234 (23%)

Query: 22   PVTPGTSGH-----CRG--GKERPARPPPASSHESHVLDNAPAAAREPPPPAP-----AP 69
            P  PG S       C G  G E P RPPPA     H  D       +P PP P     + 
Sbjct: 1684 PKRPGGSSPLNAVPCEGPPGSEPPRRPPPAP----HDGDRKELPREQPLPPGPIGTERSQ 1739

Query: 70   RCLRLRPPFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGR 129
            R  R   P P    + RPG  PV +G    +    L  G+ L     L     E   + R
Sbjct: 1740 RTDRGTEPGPIRP-SHRPGP-PVQFGTSDKDSDLRLVVGDSLKAEKELTASVTEAIPVSR 1797

Query: 130  D-----RGAGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSW----- 179
            D       A    P  K  D                   G C P  P S   R +     
Sbjct: 1798 DWELLPSAAASAEPQSKNLDS------------------GHCVPE-PSSSGQRLYPEVFY 1838

Query: 180  --AQPAGGRAPGCAAPWVPQCHP----LPPGQSSAERYRALCPALPPSSAPSGA 227
              A P+  +  G A     Q HP      PG  S   YR+    LPP  AP  A
Sbjct: 1839 GSAGPSSSQISGGAMD--SQLHPNSGGFRPGTPSLHPYRSQPLYLPPGPAPPSA 1890



 Score = 32.7 bits (73), Expect = 0.31
 Identities = 63/247 (25%), Positives = 87/247 (35%), Gaps = 54/247 (21%)

Query: 26  GTSGH----CRGGKERPARPPPASSHESHVLDNAPAAAR------------EPPPPAPAP 69
           G  GH       G+ERP   P A   + +  ++ P   +            EP PPAP P
Sbjct: 354 GAEGHRDSQSASGEERP---PEADGKKGNSPNSEPPTPKTAWAETSRPPETEPGPPAPKP 410

Query: 70  RCLRLRPPFPEEGVAAR---PGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPA 126
                  P P  G A     PG  P   G    +      E E    W    + +    +
Sbjct: 411 PL-----PPPHRGPAGNWGPPGDYP-DRGGPPCKPPAPEDEDE---AWRQRRKQSSSEIS 461

Query: 127 LGRDRGAGRMSPHGKRADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWAQPAGGR 186
           L  +R   R     +R   Q + +        R  ++ G   +       R  A+PA   
Sbjct: 462 LAVERARRRREEEERRM--QEERRAACAEKLKRLDEKFGAPDK-------RLKAEPA--- 509

Query: 187 APGCAAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAP----RSPPLRLQRYTT 242
           AP  AAP  P   P  P +  A       PA PP+SAP+    P    ++PP +      
Sbjct: 510 APP-AAPSTPAPPPAVPKELPAP------PAPPPASAPTPETEPEEPAQAPPAQSTPTPG 562

Query: 243 AAAAPAL 249
            AAAP L
Sbjct: 563 VAAAPTL 569



 Score = 32.0 bits (71), Expect = 0.53
 Identities = 53/194 (27%), Positives = 64/194 (32%), Gaps = 26/194 (13%)

Query: 38  PARPPPASSHESHVLDNAPAAAREPPPP-APAPRCLRLRPPFPEEGVAARPGSCPVGWGA 96
           P  P P S  +   L   PA    PPPP A  P  L   PP P      R    P     
Sbjct: 673 PPTPVPPSPPQPVTLGAVPAPQAPPPPPKALYPGALGRPPPMPPMNFDPRWMMIPPYVDP 732

Query: 97  RKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGKRADGQAQGQLRLPPS 156
           R L+G   L      V  + L      +P    D G     P  + A    + +   PP 
Sbjct: 733 RLLQGRPPLDFYPPGVHPSGL------VPRERSDSGGSSSEPFDRHAPAMLR-ERGTPPV 785

Query: 157 TPRAPDRGG------CEPRAPRSQELRSWAQPAGGRAPGCAAPWVPQCHPLPPGQSSAER 210
            P+    G        EPR P +  LR  A     +      P VP   P PP       
Sbjct: 786 DPKLAWVGDVFTATPAEPR-PLTSPLRQ-AADEDDKGMRSETPPVP---PPPP------- 833

Query: 211 YRALCPALPPSSAP 224
           Y A  P  P + AP
Sbjct: 834 YLASYPGFPENGAP 847


>gi|71274172 ankyrin repeat domain 56 [Homo sapiens]
          Length = 793

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 58/209 (27%), Positives = 73/209 (34%), Gaps = 26/209 (12%)

Query: 34  GKERPARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPPFPEE---GVAARPGSC 90
           G +RP  PP A+         +P  AR   PP   PR  R R   PEE   G AAR    
Sbjct: 85  GLQRPREPPAAAPSAGGAAPCSPRGARRGEPPQQQPR-RRRREKEPEEEPAGAAARAADA 143

Query: 91  PV----GWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGKRADGQ 146
                 G  +R+  G G   +G         P     +PA        R S    +  G+
Sbjct: 144 ACNGLPGSDSRRAPGKGGGSKGS--------PGQRPPVPAAAAAGAQARASCAAAKTQGR 195

Query: 147 AQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWAQPAGG-------RAPGCAA--PWVPQ 197
              +  L  +    P   G  P +  ++E  + A PA         R  G  A    VP 
Sbjct: 196 CCWEC-LQNNLAVLPGELGALPHSATAEEKPARALPAQDDRGASREREEGALAEPAPVPA 254

Query: 198 CHPLPPGQSSAERYRALCPALPPSSAPSG 226
               PP    A   RA  PAL P  AP G
Sbjct: 255 VAHSPPATVEAATSRASPPALLPGPAPRG 283


>gi|113427525 PREDICTED: similar to hCG2037003 [Homo sapiens]
          Length = 196

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 51/176 (28%), Positives = 67/176 (38%), Gaps = 28/176 (15%)

Query: 43  PASSHESHVLDNAPAAAREPPPPAPAPRCL-RLRPPFPE-----------EGV-AARPGS 89
           PA    + +L N      E PPPAPAP    RLR P P+           +G+    PGS
Sbjct: 4   PARIPCNKILTNDGPPGPETPPPAPAPTARPRLRLPAPDWRARRADLTRRKGLRRGEPGS 63

Query: 90  CPVGWG---ARKLE----GTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGKR 142
             +G G   AR+ +     T   GEG    + A  P  +   P+L  D   GR +  G  
Sbjct: 64  RGLGEGPAAARRPQVQSIDTTPSGEGAPSFSRAQRPGRSGPSPSLASDPAPGRGAAWGSL 123

Query: 143 ADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWAQPAGGRAPGCAAPWVPQC 198
             G+ Q  L          + GG   R  R+ E+R      G   PG      P C
Sbjct: 124 RPGKRQQALE--------SEAGGRASREARAAEVRERIPGGGSWCPGRRDWLTPPC 171


>gi|153946391 N-methyl-D-aspartate receptor subunit 2D precursor [Homo
            sapiens]
          Length = 1336

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 56/192 (29%), Positives = 71/192 (36%), Gaps = 39/192 (20%)

Query: 55   APAAAREPPPPAPAPRCLRLRPPFPEEGVAARPGSCPV---------GWGARKLEGTGVL 105
            AP  A+ PPPP P P      P +P    A  PG  P           W  R+ +G G  
Sbjct: 902  APPPAKPPPPPQPLP-----SPAYPAPRPA--PGPAPFVPRERASVDRW--RRTKGAGPP 952

Query: 106  GEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGKRADGQAQGQLRLPPST--PRAPDR 163
            G G  L    +   G  E   LG   G  R +P G      A G+   PP+   P+ P  
Sbjct: 953  G-GAGLADGFHRYYGPIEPQGLGLGLGEARAAPRG------AAGRPLSPPAAQPPQKP-- 1003

Query: 164  GGCEPRAPRSQELRSWAQPAGGRAPGCAAPWVPQCHPLPPGQSSAERYRALCP-ALPPSS 222
                P        +  A+P  G  PG  +P      P PP  ++      LC  A    S
Sbjct: 1004 ---PPSYFAIVRDKEPAEPPAGAFPGFPSP------PAPPAAAATAVGPPLCRLAFEDES 1054

Query: 223  APSGAEAPRSPP 234
             P+ A  PRS P
Sbjct: 1055 PPAPARWPRSDP 1066



 Score = 28.1 bits (61), Expect = 7.7
 Identities = 28/94 (29%), Positives = 32/94 (34%), Gaps = 20/94 (21%)

Query: 32   RGGKERPARPP-------PASSHESHVLDNAPAAAREPP---------PPAP-APRCLRL 74
            RG   RP  PP       P  S+ + V D  PA   EPP         PPAP A     +
Sbjct: 985  RGAAGRPLSPPAAQPPQKPPPSYFAIVRDKEPA---EPPAGAFPGFPSPPAPPAAAATAV 1041

Query: 75   RPPFPEEGVAARPGSCPVGWGARKLEGTGVLGEG 108
             PP             P  W     E   +LG G
Sbjct: 1042 GPPLCRLAFEDESPPAPARWPRSDPESQPLLGPG 1075


>gi|37537692 proline-rich protein BstNI subfamily 4 precursor [Homo
           sapiens]
          Length = 247

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 39/147 (26%), Positives = 55/147 (37%), Gaps = 29/147 (19%)

Query: 37  RPARPPPASSHESHVLDNAPAAAREPPP------PAPAPRCLRLRPPFPEEGVAARPGSC 90
           +P RPPP   ++SH     P     PPP        P P   +   P P+EG  +R    
Sbjct: 119 KPERPPPQGGNQSHRPPPPPGKPERPPPQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARS 178

Query: 91  PVG--WGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGKRADGQAQ 148
           P G   G  + EG              N PQG    P  G+ +G      + ++      
Sbjct: 179 PPGKPQGPPQQEG--------------NKPQGP---PPPGKPQGPPPAGGNPQQPQAPPA 221

Query: 149 GQLRLPPSTPRAPDRGGCEPRAPRSQE 175
           G+    P  P  P +GG  PR  + Q+
Sbjct: 222 GK----PQGPPPPPQGGRPPRPAQGQQ 244



 Score = 35.0 bits (79), Expect = 0.063
 Identities = 52/212 (24%), Positives = 71/212 (33%), Gaps = 36/212 (16%)

Query: 32  RGGKERPARPPPASSHESHVLDNAPAAAREPPPPAPAPRCLRLRPP---FPEEGVAARPG 88
           +GG +    PPP    +         +   PPPP         RPP      +G    PG
Sbjct: 42  QGGNQPQRPPPPPGKPQGPPPQGGNQSQGPPPPPGKPEG----RPPQGGNQSQGPPPHPG 97

Query: 89  --SCPVGWGARKLEGTGVLGEGEKLVTWANLPQGNEELPALGRDRGAGRMSPHGK--RAD 144
               P   G  + +GT               P   E  P  G ++      P GK  R  
Sbjct: 98  KPERPPPQGGNQSQGT------------PPPPGKPERPPPQGGNQSHRPPPPPGKPERPP 145

Query: 145 GQAQGQLRLPPSTPRAPD----RGGCEPRAPRSQELRSWAQP--AGGRAPGCAAPWVPQC 198
            Q   Q + PP  P  P+    + G + R+ RS   +    P   G +  G   P  PQ 
Sbjct: 146 PQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPPPPGKPQ- 204

Query: 199 HPLPPGQSSAERYRALCPALPPSSAPSGAEAP 230
            P P G +  +      P  PP+  P G   P
Sbjct: 205 GPPPAGGNPQQ------PQAPPAGKPQGPPPP 230



 Score = 33.5 bits (75), Expect = 0.18
 Identities = 50/233 (21%), Positives = 66/233 (28%), Gaps = 49/233 (21%)

Query: 4   LRAGLNGSEWVGWSYVFYPVTPGTSGHCRGGKERPARPPPASSHESHVLDNAPAAAREPP 63
           L +  + SE V      + ++    G    G  +P RPPP               ++ PP
Sbjct: 13  LSSAESSSEDVSQEESLFLISGKPEGRRPQGGNQPQRPPPPPGKPQGPPPQGGNQSQGPP 72

Query: 64  PPAPAPRCLRLRPPFPEEGVAARPGSCPVGWGARKLEGTGVLGEGEKLVTWANLPQGNEE 123
           PP   P     RPP   +G     G  P                          P   E 
Sbjct: 73  PPPGKPEG---RPP---QGGNQSQGPPPH-------------------------PGKPER 101

Query: 124 LPALGRDRGAGRMSPHGK--RADGQAQGQLRLPPSTPRAPDRGGCEPRAPRSQELRSWAQ 181
            P  G ++  G   P GK  R   Q   Q   PP  P  P+R                  
Sbjct: 102 PPPQGGNQSQGTPPPPGKPERPPPQGGNQSHRPPPPPGKPER----------------PP 145

Query: 182 PAGGRAPGCAAPWVPQCHPLPPGQSSAERYRALCPALPPSSAPSGAEAPRSPP 234
           P GG       P   +    PP + +  R     P  P          P+ PP
Sbjct: 146 PQGGNQSQGPPPHPGKPEGPPPQEGNKSRSARSPPGKPQGPPQQEGNKPQGPP 198


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.134    0.443 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,764,646
Number of Sequences: 37866
Number of extensions: 1142201
Number of successful extensions: 10233
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 914
Number of HSP's that attempted gapping in prelim test: 7278
Number of HSP's gapped (non-prelim): 3246
length of query: 254
length of database: 18,247,518
effective HSP length: 100
effective length of query: 154
effective length of database: 14,460,918
effective search space: 2226981372
effective search space used: 2226981372
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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