Guide to the Human Genome
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Name: FSCN2 Sequence: fasta or formatted (516aa) NCBI GI: 116295251
Description:

fascin 2 isoform 2

Referenced in:

Cytoskeleton

Other entries for this name:
alt prot [492aa] fascin 2 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.7         45           2
 C cysteine            2.3         12           1
 D aspartate           6.2         32           2
 E glutamate           5.6         29           2
 F phenylalanine       4.5         23           2
 G glycine             9.7         50           2
 H histidine           3.3         17           2
 I isoleucine          1.9         10           1
 K lysine              3.9         20           2
 L leucine             9.7         50           2
 M methionine          1.2          6           1
 N asparagine          2.5         13           1
 P proline             5.0         26           3
 Q glutamine           3.5         18           2
 R arginine            8.7         45           3
 S serine              6.4         33           2
 T threonine           5.2         27           1
 V valine              6.6         34           2
 W tryptophan          1.9         10           1
 Y tyrosine            3.1         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fascin 2 isoform 2 
FSCN2                 0.937   fascin 2 isoform 1 
FSCN1                 0.506   fascin 1 
FSCN3                 0.131   fascin 3 
FGF17                 0.010   fibroblast growth factor 17 precursor 
LOC284297             0.007   hypothetical protein LOC284297 
LOC100131774          0.007   PREDICTED: hypothetical protein 
LOC100131774          0.007   PREDICTED: hypothetical protein 
CD27                  0.007   tumor necrosis factor receptor superfamily, member 7 ...
FGF19                 0.007   fibroblast growth factor 19 precursor 
GABRR1                0.007   gamma-aminobutyric acid (GABA) receptor, rho 1 [Hom...
LOC100131774          0.006   PREDICTED: hypothetical protein 
GABRR2                0.005   gamma-aminobutyric acid (GABA) receptor, rho 2 prec...
RCBTB2                0.005   regulator of chromosome condensation and BTB domain c...
UBTF                  0.004   upstream binding transcription factor, RNA polymera...
UBTF                  0.004   upstream binding transcription factor, RNA polymera...
UBTF                  0.004   upstream binding transcription factor, RNA polymerase...
CASKIN2               0.004   cask-interacting protein 2 isoform b 
CASKIN2               0.004   cask-interacting protein 2 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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