Guide to the Human Genome
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Name: FSCN3 Sequence: fasta or formatted (498aa) NCBI GI: 9966791
Description:

fascin 3

Referenced in:

Cytoskeleton

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         27           2
 C cysteine            4.2         21           1
 D aspartate           3.8         19           1
 E glutamate           5.2         26           2
 F phenylalanine       5.4         27           2
 G glycine             8.4         42           2
 H histidine           5.0         25           2
 I isoleucine          4.4         22           2
 K lysine              1.6          8           1
 L leucine            10.8         54           3
 M methionine          2.4         12           1
 N asparagine          3.2         16           1
 P proline             4.4         22           1
 Q glutamine           4.0         20           1
 R arginine            7.8         39           2
 S serine              7.6         38           3
 T threonine           5.4         27           1
 V valine              5.0         25           2
 W tryptophan          2.4         12           1
 Y tyrosine            3.2         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fascin 3 
FSCN1                 0.151   fascin 1 
FSCN2                 0.141   fascin 2 isoform 1 
FSCN2                 0.133   fascin 2 isoform 2 
FRG1                  0.009   FSHD region gene 1 
LIMD1                 0.007   LIM domains containing 1 
KDELR2                0.007   KDEL receptor 2 isoform 2 
RABGGTA               0.005   Rab geranylgeranyltransferase alpha 
RABGGTA               0.005   Rab geranylgeranyltransferase alpha 
LOC100293552          0.005   PREDICTED: similar to hCG1992776 
LOC100290870          0.005   PREDICTED: hypothetical protein XP_002346465 
CHD8                  0.005   chromodomain helicase DNA binding protein 8 
HMCN1                 0.004   hemicentin 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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