Guide to the Human Genome
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Name: FGF17 Sequence: fasta or formatted (216aa) NCBI GI: 4503693
Description:

fibroblast growth factor 17 precursor

Referenced in:

Fibroblast Growth Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         14           2
 C cysteine            2.3          5           2
 D aspartate           2.3          5           1
 E glutamate           5.6         12           1
 F phenylalanine       5.1         11           1
 G glycine             6.9         15           1
 H histidine           2.3          5           1
 I isoleucine          4.2          9           1
 K lysine              6.5         14           1
 L leucine             7.4         16           2
 M methionine          1.9          4           1
 N asparagine          5.1         11           2
 P proline             4.6         10           1
 Q glutamine           8.8         19           1
 R arginine           11.1         24           2
 S serine              5.6         12           1
 T threonine           6.9         15           1
 V valine              3.7          8           1
 W tryptophan          0.5          1           1
 Y tyrosine            2.8          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fibroblast growth factor 17 precursor 
FGF8                  0.549   fibroblast growth factor 8 isoform B precursor 
FGF8                  0.520   fibroblast growth factor 8 isoform F precursor [Homo...
FGF8                  0.511   fibroblast growth factor 8 isoform A precursor [Homo...
FGF8                  0.508   fibroblast growth factor 8 isoform E precursor [Homo...
FGF18                 0.465   fibroblast growth factor 18 precursor 
FGF7                  0.113   fibroblast growth factor 7 precursor 
FGF6                  0.091   fibroblast growth factor 6 precursor 
FGF4                  0.089   fibroblast growth factor 4 precursor 
FGF9                  0.086   fibroblast growth factor 9 precursor 
FGF20                 0.084   fibroblast growth factor 20 
FGF16                 0.084   fibroblast growth factor 16 
FGF10                 0.074   fibroblast growth factor 10 precursor 
FGF2                  0.062   fibroblast growth factor 2 
FGF5                  0.058   fibroblast growth factor 5 isoform 1 precursor [Homo...
FGF22                 0.058   fibroblast growth factor 22 precursor 
FGF13                 0.053   fibroblast growth factor 13 isoform 3 
FGF13                 0.053   fibroblast growth factor 13 isoform 3 
FGF13                 0.053   fibroblast growth factor 13 isoform 2 
FGF1                  0.053   fibroblast growth factor 1 (acidic) isoform 1 propr...
FGF1                  0.053   fibroblast growth factor 1 (acidic) isoform 1 proprot...
FGF1                  0.053   fibroblast growth factor 1 (acidic) isoform 1 propr...
FGF1                  0.053   fibroblast growth factor 1 (acidic) isoform 1 propr...
FGF13                 0.050   fibroblast growth factor 13 isoform 4 
FGF13                 0.050   fibroblast growth factor 13 isoform 1 
FGF13                 0.050   fibroblast growth factor 13 isoform 5 
FGF3                  0.050   fibroblast growth factor 3 precursor 
FGF11                 0.050   fibroblast growth factor 11 
FGF19                 0.043   fibroblast growth factor 19 precursor 
FGF14                 0.043   fibroblast growth factor 14 isoform 1B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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