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Search of human proteins with 116284404
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|116284404 cell recognition protein CASPR4 isoform 1 [Homo
sapiens]
(1308 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|116284404 cell recognition protein CASPR4 isoform 1 [Homo sap... 2679 0.0
gi|148664242 cell recognition protein CASPR4 isoform 2 [Homo sap... 2504 0.0
gi|47519929 cell recognition molecule CASPR3 [Homo sapiens] 1861 0.0
gi|239743754 PREDICTED: hypothetical protein LOC389722 isoform 1... 1845 0.0
gi|18640734 contactin associated protein-like 5 [Homo sapiens] 1595 0.0
gi|239743756 PREDICTED: hypothetical protein LOC389722 isoform 2... 1378 0.0
gi|7662350 cell recognition molecule Caspr2 precursor [Homo sapi... 1286 0.0
gi|4505463 contactin associated protein 1 precursor [Homo sapiens] 931 0.0
gi|239743797 PREDICTED: similar to cell recognition molecule CAS... 740 0.0
gi|239743729 PREDICTED: similar to contactin associated protein-... 551 e-156
gi|169184330 PREDICTED: novel protein similar to contactin assoc... 336 1e-91
gi|239758135 PREDICTED: similar to cell recognition molecule CAS... 193 1e-48
gi|21166380 neurexin 2 isoform alpha-2 precursor [Homo sapiens] 138 3e-32
gi|14211536 neurexin 2 isoform alpha-1 precursor [Homo sapiens] 137 5e-32
gi|14149613 neurexin 1 isoform alpha1 precursor [Homo sapiens] 134 4e-31
gi|208609951 neurexin 1 isoform alpha2 precursor [Homo sapiens] 132 2e-30
gi|21070969 neurexin 3 isoform 1 precursor [Homo sapiens] 125 2e-28
gi|239752499 PREDICTED: similar to cell recognition molecule Cas... 107 6e-23
gi|105990535 coagulation factor V precursor [Homo sapiens] 86 2e-16
gi|54873613 agrin [Homo sapiens] 82 3e-15
gi|167830475 milk fat globule-EGF factor 8 protein isoform a [Ho... 81 7e-15
gi|10518506 coagulation factor VIII isoform b precursor [Homo sa... 80 1e-14
gi|4503647 coagulation factor VIII isoform a precursor [Homo sap... 80 1e-14
gi|54792129 discoidin, CUB and LCCL domain containing 2 [Homo sa... 80 2e-14
gi|66346693 FAT tumor suppressor 1 precursor [Homo sapiens] 79 2e-14
gi|62420886 discoidin domain receptor family, member 2 precursor... 75 5e-13
gi|62420884 discoidin domain receptor family, member 2 precursor... 75 5e-13
gi|38788416 laminin, alpha 1 precursor [Homo sapiens] 74 7e-13
gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo... 74 1e-12
gi|33469935 EGF-like, fibronectin type III and laminin G domains... 74 1e-12
>gi|116284404 cell recognition protein CASPR4 isoform 1 [Homo sapiens]
Length = 1308
Score = 2679 bits (6944), Expect = 0.0
Identities = 1308/1308 (100%), Positives = 1308/1308 (100%)
Query: 1 MGSVTGAVLKTLLLLSTQNWNRVEAGNSYDCDDPLVSALPQASFSSSSELSSSHGPGFAR 60
MGSVTGAVLKTLLLLSTQNWNRVEAGNSYDCDDPLVSALPQASFSSSSELSSSHGPGFAR
Sbjct: 1 MGSVTGAVLKTLLLLSTQNWNRVEAGNSYDCDDPLVSALPQASFSSSSELSSSHGPGFAR 60
Query: 61 LNRRDGAGGWSPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSNWVTSYLLMFSDSGWNW 120
LNRRDGAGGWSPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSNWVTSYLLMFSDSGWNW
Sbjct: 61 LNRRDGAGGWSPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSNWVTSYLLMFSDSGWNW 120
Query: 121 KQYRQEDSIWGFSGNANADSVVYYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGCAYR 180
KQYRQEDSIWGFSGNANADSVVYYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGCAYR
Sbjct: 121 KQYRQEDSIWGFSGNANADSVVYYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGCAYR 180
Query: 181 SEVVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREGPNGDHITLQLRRAR 240
SEVVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREGPNGDHITLQLRRAR
Sbjct: 181 SEVVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREGPNGDHITLQLRRAR 240
Query: 241 LFLLINSGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRLGKQVNFTVDEHRHHFHARGE 300
LFLLINSGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRLGKQVNFTVDEHRHHFHARGE
Sbjct: 241 LFLLINSGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRLGKQVNFTVDEHRHHFHARGE 300
Query: 301 FNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNV 360
FNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNV
Sbjct: 301 FNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNV 360
Query: 361 SFSCSQPQSMPVTFLSSRSYLALPDFSGEEEVSATFQFRTWNKAGLLLFSELQLISGGIL 420
SFSCSQPQSMPVTFLSSRSYLALPDFSGEEEVSATFQFRTWNKAGLLLFSELQLISGGIL
Sbjct: 361 SFSCSQPQSMPVTFLSSRSYLALPDFSGEEEVSATFQFRTWNKAGLLLFSELQLISGGIL 420
Query: 421 LFLSDGKLKSNLYQPGKLPSDITAGVELNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLL 480
LFLSDGKLKSNLYQPGKLPSDITAGVELNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLL
Sbjct: 421 LFLSDGKLKSNLYQPGKLPSDITAGVELNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLL 480
Query: 481 GPEQIYSGGTYYFGGCPDKSFGSKCKSPLGGFQGCMRLISISGKVVDLISVQQGSLGNFS 540
GPEQIYSGGTYYFGGCPDKSFGSKCKSPLGGFQGCMRLISISGKVVDLISVQQGSLGNFS
Sbjct: 481 GPEQIYSGGTYYFGGCPDKSFGSKCKSPLGGFQGCMRLISISGKVVDLISVQQGSLGNFS 540
Query: 541 DLQIDSCGISDRCLPNYCEHGGECSQSWSTFHCNCTNTGYRGATCHNSIYEQSCEAYKHR 600
DLQIDSCGISDRCLPNYCEHGGECSQSWSTFHCNCTNTGYRGATCHNSIYEQSCEAYKHR
Sbjct: 541 DLQIDSCGISDRCLPNYCEHGGECSQSWSTFHCNCTNTGYRGATCHNSIYEQSCEAYKHR 600
Query: 601 GNTSGFYYIDSDGSGPLEPFLLYCNMTETAWTIIQHNGSDLTRVRNTNPENPYAGFFEYV 660
GNTSGFYYIDSDGSGPLEPFLLYCNMTETAWTIIQHNGSDLTRVRNTNPENPYAGFFEYV
Sbjct: 601 GNTSGFYYIDSDGSGPLEPFLLYCNMTETAWTIIQHNGSDLTRVRNTNPENPYAGFFEYV 660
Query: 661 ASMEQLQATINRAEHCEQEFTYYCKKSRLVNKQDGTPLSWWVGRTNETQTYWGGSSPDLQ 720
ASMEQLQATINRAEHCEQEFTYYCKKSRLVNKQDGTPLSWWVGRTNETQTYWGGSSPDLQ
Sbjct: 661 ASMEQLQATINRAEHCEQEFTYYCKKSRLVNKQDGTPLSWWVGRTNETQTYWGGSSPDLQ 720
Query: 721 KCTCGLEGNCIDSQYYCNCDADRNEWTNDTGLLAYKEHLPVTKIVITDTGRLHSEAAYKL 780
KCTCGLEGNCIDSQYYCNCDADRNEWTNDTGLLAYKEHLPVTKIVITDTGRLHSEAAYKL
Sbjct: 721 KCTCGLEGNCIDSQYYCNCDADRNEWTNDTGLLAYKEHLPVTKIVITDTGRLHSEAAYKL 780
Query: 781 GPLLCQGDRSFWNSASFDTEASYLHFPTFHGELSADVSFFFKTTASSGVFLENLGIADFI 840
GPLLCQGDRSFWNSASFDTEASYLHFPTFHGELSADVSFFFKTTASSGVFLENLGIADFI
Sbjct: 781 GPLLCQGDRSFWNSASFDTEASYLHFPTFHGELSADVSFFFKTTASSGVFLENLGIADFI 840
Query: 841 RIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQ 900
RIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQ
Sbjct: 841 RIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQ 900
Query: 901 PAPADGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRG 960
PAPADGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRG
Sbjct: 901 PAPADGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRG 960
Query: 961 HCSSYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQENYLL 1020
HCSSYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQENYLL
Sbjct: 961 HCSSYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQENYLL 1020
Query: 1021 SKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQIRY 1080
SKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQIRY
Sbjct: 1021 SKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQIRY 1080
Query: 1081 KLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIEIDDNRRRQVHLSSGTEFSAVKS 1140
KLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIEIDDNRRRQVHLSSGTEFSAVKS
Sbjct: 1081 KLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIEIDDNRRRQVHLSSGTEFSAVKS 1140
Query: 1141 LVLGRILEHSDVDQDTALAGAQGFTGCLSAVQLSHVAPLKAALHPSHPDPVTVTGHVTES 1200
LVLGRILEHSDVDQDTALAGAQGFTGCLSAVQLSHVAPLKAALHPSHPDPVTVTGHVTES
Sbjct: 1141 LVLGRILEHSDVDQDTALAGAQGFTGCLSAVQLSHVAPLKAALHPSHPDPVTVTGHVTES 1200
Query: 1201 SCMAQPGTDATSRERTHSFADHSGTIDDREPLANAIKSDSAVIGGLIAVVIFILLCITAI 1260
SCMAQPGTDATSRERTHSFADHSGTIDDREPLANAIKSDSAVIGGLIAVVIFILLCITAI
Sbjct: 1201 SCMAQPGTDATSRERTHSFADHSGTIDDREPLANAIKSDSAVIGGLIAVVIFILLCITAI 1260
Query: 1261 AVRIYQQKRLYKRSEAKRSENVDSAEAVLKSELNIQNAVNENQKEYFF 1308
AVRIYQQKRLYKRSEAKRSENVDSAEAVLKSELNIQNAVNENQKEYFF
Sbjct: 1261 AVRIYQQKRLYKRSEAKRSENVDSAEAVLKSELNIQNAVNENQKEYFF 1308
>gi|148664242 cell recognition protein CASPR4 isoform 2 [Homo sapiens]
Length = 1235
Score = 2504 bits (6489), Expect = 0.0
Identities = 1232/1281 (96%), Positives = 1233/1281 (96%), Gaps = 48/1281 (3%)
Query: 28 SYDCDDPLVSALPQASFSSSSELSSSHGPGFARLNRRDGAGGWSPLVSNKYQWLQIDLGE 87
+YDCDDPLVSALPQASFSSSSELSSSHGPGFARLNRRDGAGGWSPLVSNKYQWLQIDLGE
Sbjct: 3 NYDCDDPLVSALPQASFSSSSELSSSHGPGFARLNRRDGAGGWSPLVSNKYQWLQIDLGE 62
Query: 88 RMEVTAVATQGGYGSSNWVTSYLLMFSDSGWNWKQYRQEDSIWGFSGNANADSVVYYRLQ 147
RMEVTAVATQGGYGSSNWVTSYLLMFSDSGWNWKQYRQEDSIWGFSGNANADSVVYYRLQ
Sbjct: 63 RMEVTAVATQGGYGSSNWVTSYLLMFSDSGWNWKQYRQEDSIWGFSGNANADSVVYYRLQ 122
Query: 148 PSIKARFLRFIPLEWNPKGRIGMRIEVFGCAYRSEVVDLDGKSSLLYRFDQKSLSPIKDI 207
PSIKARFLRFIPLEWNPKGRIGMRIEVFGCAYRSEVVDLDGKSSLLYRFDQKSLSPIKDI
Sbjct: 123 PSIKARFLRFIPLEWNPKGRIGMRIEVFGCAYRSEVVDLDGKSSLLYRFDQKSLSPIKDI 182
Query: 208 ISLKFKTMQSDGILLHREGPNGDHITLQLRRARLFLLINSGEAKLPSTSTLVNLTLGSLL 267
ISLKFKTMQSDGILLHREGPNGDHITLQLRRARLFLLINSGEAKLPSTSTLVNLTLGSLL
Sbjct: 183 ISLKFKTMQSDGILLHREGPNGDHITLQLRRARLFLLINSGEAKLPSTSTLVNLTLGSLL 242
Query: 268 DDQHWHSVLIQRLGKQVNFTVDEHRHHFHARGEFNLMNLDYEISFGGIPAPGKSVSFPHR 327
DDQHWHSVLIQRLGKQVNFTVDEHRHHFHARGEFNLMNLDYE
Sbjct: 243 DDQHWHSVLIQRLGKQVNFTVDEHRHHFHARGEFNLMNLDYE------------------ 284
Query: 328 NFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNVSFSCSQPQSMPVTFLSSRSYLALPDFS 387
GNVSFSCSQPQSMPVTFLSSRSYLALPDFS
Sbjct: 285 ------------------------------GNVSFSCSQPQSMPVTFLSSRSYLALPDFS 314
Query: 388 GEEEVSATFQFRTWNKAGLLLFSELQLISGGILLFLSDGKLKSNLYQPGKLPSDITAGVE 447
GEEEVSATFQFRTWNKAGLLLFSELQLISGGILLFLSDGKLKSNLYQPGKLPSDITAGVE
Sbjct: 315 GEEEVSATFQFRTWNKAGLLLFSELQLISGGILLFLSDGKLKSNLYQPGKLPSDITAGVE 374
Query: 448 LNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLLGPEQIYSGGTYYFGGCPDKSFGSKCKS 507
LNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLLGPEQIYSGGTYYFGGCPDKSFGSKCKS
Sbjct: 375 LNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLLGPEQIYSGGTYYFGGCPDKSFGSKCKS 434
Query: 508 PLGGFQGCMRLISISGKVVDLISVQQGSLGNFSDLQIDSCGISDRCLPNYCEHGGECSQS 567
PLGGFQGCMRLISISGKVVDLISVQQGSLGNFSDLQIDSCGISDRCLPNYCEHGGECSQS
Sbjct: 435 PLGGFQGCMRLISISGKVVDLISVQQGSLGNFSDLQIDSCGISDRCLPNYCEHGGECSQS 494
Query: 568 WSTFHCNCTNTGYRGATCHNSIYEQSCEAYKHRGNTSGFYYIDSDGSGPLEPFLLYCNMT 627
WSTFHCNCTNTGYRGATCHNSIYEQSCEAYKHRGNTSGFYYIDSDGSGPLEPFLLYCNMT
Sbjct: 495 WSTFHCNCTNTGYRGATCHNSIYEQSCEAYKHRGNTSGFYYIDSDGSGPLEPFLLYCNMT 554
Query: 628 ETAWTIIQHNGSDLTRVRNTNPENPYAGFFEYVASMEQLQATINRAEHCEQEFTYYCKKS 687
ETAWTIIQHNGSDLTRVRNTNPENPYAGFFEYVASMEQLQATINRAEHCEQEFTYYCKKS
Sbjct: 555 ETAWTIIQHNGSDLTRVRNTNPENPYAGFFEYVASMEQLQATINRAEHCEQEFTYYCKKS 614
Query: 688 RLVNKQDGTPLSWWVGRTNETQTYWGGSSPDLQKCTCGLEGNCIDSQYYCNCDADRNEWT 747
RLVNKQDGTPLSWWVGRTNETQTYWGGSSPDLQKCTCGLEGNCIDSQYYCNCDADRNEWT
Sbjct: 615 RLVNKQDGTPLSWWVGRTNETQTYWGGSSPDLQKCTCGLEGNCIDSQYYCNCDADRNEWT 674
Query: 748 NDTGLLAYKEHLPVTKIVITDTGRLHSEAAYKLGPLLCQGDRSFWNSASFDTEASYLHFP 807
NDTGLLAYKEHLPVTKIVITDTGRLHSEAAYKLGPLLCQGDRSFWNSASFDTEASYLHFP
Sbjct: 675 NDTGLLAYKEHLPVTKIVITDTGRLHSEAAYKLGPLLCQGDRSFWNSASFDTEASYLHFP 734
Query: 808 TFHGELSADVSFFFKTTASSGVFLENLGIADFIRIELRSPTVVTFSFDVGNGPFEISVQS 867
TFHGELSADVSFFFKTTASSGVFLENLGIADFIRIELRSPTVVTFSFDVGNGPFEISVQS
Sbjct: 735 TFHGELSADVSFFFKTTASSGVFLENLGIADFIRIELRSPTVVTFSFDVGNGPFEISVQS 794
Query: 868 PTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQPAPADGHVLLQLNSQLFVGGTATRQRG 927
PTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQPAPADGHVLLQLNSQLFVGGTATRQRG
Sbjct: 795 PTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQPAPADGHVLLQLNSQLFVGGTATRQRG 854
Query: 928 FLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRGHCSSYGKLCRNGGKCRERPIGFFCDCT 987
FLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRGHCSSYGKLCRNGGKCRERPIGFFCDCT
Sbjct: 855 FLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRGHCSSYGKLCRNGGKCRERPIGFFCDCT 914
Query: 988 FSAYTGPFCSNEISAYFGSGSSVIYNFQENYLLSKNSSSHAASFHGDMKLSREMIKFSFR 1047
FSAYTGPFCSNEISAYFGSGSSVIYNFQENYLLSKNSSSHAASFHGDMKLSREMIKFSFR
Sbjct: 915 FSAYTGPFCSNEISAYFGSGSSVIYNFQENYLLSKNSSSHAASFHGDMKLSREMIKFSFR 974
Query: 1048 TTRTPSLLLFVSSFYKEYLSVIIAKNGSLQIRYKLNKYQEPDVVNFDFKNMADGQLHHIM 1107
TTRTPSLLLFVSSFYKEYLSVIIAKNGSLQIRYKLNKYQEPDVVNFDFKNMADGQLHHIM
Sbjct: 975 TTRTPSLLLFVSSFYKEYLSVIIAKNGSLQIRYKLNKYQEPDVVNFDFKNMADGQLHHIM 1034
Query: 1108 INREEGVVFIEIDDNRRRQVHLSSGTEFSAVKSLVLGRILEHSDVDQDTALAGAQGFTGC 1167
INREEGVVFIEIDDNRRRQVHLSSGTEFSAVKSLVLGRILEHSDVDQDTALAGAQGFTGC
Sbjct: 1035 INREEGVVFIEIDDNRRRQVHLSSGTEFSAVKSLVLGRILEHSDVDQDTALAGAQGFTGC 1094
Query: 1168 LSAVQLSHVAPLKAALHPSHPDPVTVTGHVTESSCMAQPGTDATSRERTHSFADHSGTID 1227
LSAVQLSHVAPLKAALHPSHPDPVTVTGHVTESSCMAQPGTDATSRERTHSFADHSGTID
Sbjct: 1095 LSAVQLSHVAPLKAALHPSHPDPVTVTGHVTESSCMAQPGTDATSRERTHSFADHSGTID 1154
Query: 1228 DREPLANAIKSDSAVIGGLIAVVIFILLCITAIAVRIYQQKRLYKRSEAKRSENVDSAEA 1287
DREPLANAIKSDSAVIGGLIAVVIFILLCITAIAVRIYQQKRLYKRSEAKRSENVDSAEA
Sbjct: 1155 DREPLANAIKSDSAVIGGLIAVVIFILLCITAIAVRIYQQKRLYKRSEAKRSENVDSAEA 1214
Query: 1288 VLKSELNIQNAVNENQKEYFF 1308
VLKSELNIQNAVNENQKEYFF
Sbjct: 1215 VLKSELNIQNAVNENQKEYFF 1235
>gi|47519929 cell recognition molecule CASPR3 [Homo sapiens]
Length = 1288
Score = 1861 bits (4820), Expect = 0.0
Identities = 906/1286 (70%), Positives = 1049/1286 (81%), Gaps = 8/1286 (0%)
Query: 1 MGSVTGAVLKTLLLLSTQNWNRVEAGNSYDCDDPLVSALPQASFSSSSELSSSHGPGFAR 60
M SV AVLK LLLL TQ W+ V AGN DCD PL SALP++SFSSSSELSSSHGPGF+R
Sbjct: 1 MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCDAPLASALPRSSFSSSSELSSSHGPGFSR 60
Query: 61 LNRRDGAGGWSPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSNWVTSYLLMFSDSGWNW 120
LNRRDGAGGW+PLVSNKYQWLQIDLGERMEVTAVATQGGYGSS+WVTSYLLMFSD G NW
Sbjct: 61 LNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMFSDGGRNW 120
Query: 121 KQYRQEDSIWGFSGNANADSVVYYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGCAYR 180
KQYR+E+SIWGF GN NADSVV+YRLQP +ARFLRF+PL WNP+GRIGMRIEV+GCAY+
Sbjct: 121 KQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYK 180
Query: 181 SEVVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREGPNGDHITLQLRRAR 240
SEVV DG+S+LLYR D+K L PI+D+ISLKFK MQS+GILLHREG +G+HITL+L + +
Sbjct: 181 SEVVYFDGQSALLYRLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKGK 240
Query: 241 LFLLINSGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRLGKQVNFTVDEHRHHFHARGE 300
L +NSG AKLPST V LTLGSLLDDQHWHSVLI+ L QVNFTVD+H HHF A+G+
Sbjct: 241 LVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTHHFQAKGD 300
Query: 301 FNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNV 360
+ ++L++EISFGGIP PG+S +F ++FHGCLENLYYNGVD+ +LAK+ KPQI+ MGNV
Sbjct: 301 SSYLDLNFEISFGGIPTPGRSRAFRRKSFHGCLENLYYNGVDVTELAKKHKPQILMMGNV 360
Query: 361 SFSCSQPQSMPVTFLSSRSYLALPDFSGEEEVSATFQFRTWNKAGLLLFSELQLISGGIL 420
SFSC QPQ++PVTFLSSRSYLALP SGE++VS TFQFRTWN+AG LLF EL+ SG +
Sbjct: 361 SFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGELRRGSGSFV 420
Query: 421 LFLSDGKLKSNLYQPGKLPSDITAGVELNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLL 480
LFL DGKLK +L+QPG+ P ++TAG LNDGQWHSVS SAK +H++V VD A PL+
Sbjct: 421 LFLKDGKLKLSLFQPGQSPRNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDDDTA-VQPLV 479
Query: 481 GPEQIYSGGTYYFGGCPDKSFGSKCKSPLGGFQGCMRLISISGKVVDLISVQQGSLGNFS 540
I SG TYYFGGC D S GS CKSPLGGFQGC+RLI+I K VD I VQQG+LG+F
Sbjct: 480 AV-LIDSGDTYYFGGCLDNSSGSGCKSPLGGFQGCLRLITIGDKAVDPILVQQGALGSFR 538
Query: 541 DLQIDSCGISDRCLPNYCEHGGECSQSWSTFHCNCTNTGYRGATCHNSIYEQSCEAYKHR 600
DLQIDSCGI+DRCLP+YCEHGGECSQSW TF C+C TGY G TCH+S+YEQSCEA+KHR
Sbjct: 539 DLQIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHR 598
Query: 601 GNTSGFYYIDSDGSGPLEPFLLYCNMT-ETAWTIIQHNGSDLTRVRNTNPENPYAGF-FE 658
GN SG YYID+DGSGPL PFL+YCNMT + AWT++QH G D +R +P + F
Sbjct: 599 GNPSGLYYIDADGSGPLGPFLVYCNMTADAAWTVVQHGGPDAVTLRGAPSGHPRSAVSFA 658
Query: 659 YVASMEQLQATINRAEHCEQEFTYYCKKSRLVNKQDGTPLSWWVGRTNETQTYWGGSSPD 718
Y A QL++ +N AE CEQ C +R + +DGTPLSWWVGRTNET T WGGS PD
Sbjct: 659 YAAGAGQLRSAVNLAERCEQRLALRCGTARRPDSRDGTPLSWWVGRTNETHTSWGGSLPD 718
Query: 719 LQKCTCGLEGNCIDSQYYCNCDADRNEWTNDTGLLAYKEHLPVTKIVITDTGRLHSEAAY 778
QKCTCGLEGNCIDSQYYCNCDA RNEWT+DT +L+ KEHLPVT+IV+TD GR HSEAAY
Sbjct: 719 AQKCTCGLEGNCIDSQYYCNCDAGRNEWTSDTIVLSQKEHLPVTQIVMTDAGRPHSEAAY 778
Query: 779 KLGPLLCQGDRSFWNSASFDTEASYLHFPTFHGELSADVSFFFKTTASSGVFLENLGIAD 838
LGPLLC+GD+SFWNSASF+TE SYLHFP FHGEL+ADV FFFKTT SSGVF+ENLGI D
Sbjct: 779 TLGPLLCRGDQSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGITD 838
Query: 839 FIRIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQVDQLTPK 898
FIRIELR+PT VTFSFDVGNGP E++VQSPT FNDNQWHHVR ERN+K ASLQVDQL K
Sbjct: 839 FIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQK 898
Query: 899 TQPAPADGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQLNGMTLDLEERAQVTPEVQPGC 958
QPAPADGHV LQLNSQLF+GGTATRQRGFLGCIRSLQLNG+ LDLEERA VTP V+PGC
Sbjct: 899 MQPAPADGHVRLQLNSQLFIGGTATRQRGFLGCIRSLQLNGVALDLEERATVTPGVEPGC 958
Query: 959 RGHCSSYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQENY 1018
GHCS+YG LCRNGG+CRE+ G CDC FSAY GPFCSNEISAYF +GSS+ Y+FQE+Y
Sbjct: 959 AGHCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEISAYFATGSSMTYHFQEHY 1018
Query: 1019 LLSKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQI 1078
LS+NSSS +S H D+ L+REMI SFRTTRTPSLLL+VSSFY+EYLSVI+A NGSLQI
Sbjct: 1019 TLSENSSSLVSSLHRDVTLTREMITLSFRTTRTPSLLLYVSSFYEEYLSVILANNGSLQI 1078
Query: 1079 RYKLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIEIDDNRRRQVHLSSGTEFSAV 1138
RYKL+++Q PD FDFKNMADGQLH + INREE VV +E++ + ++QV LSSGTEF+AV
Sbjct: 1079 RYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQSTKKQVILSSGTEFNAV 1138
Query: 1139 KSLVLGRILEHSDVDQDTALAGAQGFTGCLSAVQLSHVAPLKAALHPSHPDPVTVTGHVT 1198
KSL+LG++LE + D DT A GFTGCLSAV+ APLKAAL PS P VTV GHV
Sbjct: 1139 KSLILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRAAPLKAALRPSGPSRVTVRGHVA 1198
Query: 1199 E-SSCMAQPGTDATSRE---RTHSFADHSGTIDDREPLANAIKSDSAVIGGLIAVVIFIL 1254
+ C A + + +RE R A SG D+ EPL NA + DSAVIGG+IAVVIFIL
Sbjct: 1199 PMARCAAGAASGSPARELAPRLAGGAGRSGPADEGEPLVNADRRDSAVIGGVIAVVIFIL 1258
Query: 1255 LCITAIAVRIYQQKRLYKRSEAKRSE 1280
LCITAIA+RIYQQ++L K +E+K S+
Sbjct: 1259 LCITAIAIRIYQQRKLRKENESKVSK 1284
>gi|239743754 PREDICTED: hypothetical protein LOC389722 isoform 1
[Homo sapiens]
Length = 1288
Score = 1845 bits (4779), Expect = 0.0
Identities = 898/1286 (69%), Positives = 1048/1286 (81%), Gaps = 8/1286 (0%)
Query: 1 MGSVTGAVLKTLLLLSTQNWNRVEAGNSYDCDDPLVSALPQASFSSSSELSSSHGPGFAR 60
M SV AVLK LLLL TQ W+ V AGN DCD PL SALP++SFSSSSELSSSHGPGF+R
Sbjct: 1 MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCDSPLASALPRSSFSSSSELSSSHGPGFSR 60
Query: 61 LNRRDGAGGWSPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSNWVTSYLLMFSDSGWNW 120
LNRRDGAGGW+PLVSNKYQWLQIDLGERMEVTAVATQGGYGSS+WVTSYLLMFSD G NW
Sbjct: 61 LNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMFSDGGRNW 120
Query: 121 KQYRQEDSIWGFSGNANADSVVYYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGCAYR 180
KQYR+E+SIWGF GN NADSVV+YRLQP +ARFLRF+PL WNP+GRIGMRIEV+GCAY+
Sbjct: 121 KQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYK 180
Query: 181 SEVVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREGPNGDHITLQLRRAR 240
SEVV DG+S+LLY D+K L PI+D+ISLKFK MQS+GILLHREG +G+HITL+L + +
Sbjct: 181 SEVVYFDGQSALLYTLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKGK 240
Query: 241 LFLLINSGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRLGKQVNFTVDEHRHHFHARGE 300
L +NSG AKLPST V LTLGSLLDDQHWHSVLI+ L QVNFTVD+H HHF A+G+
Sbjct: 241 LVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTHHFQAKGD 300
Query: 301 FNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNV 360
+ ++L++EISFGGI +PG+S +F ++FHGCLENLYYNGVD+ +LAK+ KPQI+ MGNV
Sbjct: 301 SSNLDLNFEISFGGILSPGRSRAFTRKSFHGCLENLYYNGVDVTELAKKHKPQILMMGNV 360
Query: 361 SFSCSQPQSMPVTFLSSRSYLALPDFSGEEEVSATFQFRTWNKAGLLLFSELQLISGGIL 420
SFSC QPQ++PVTFLSSRSYLALP SGE++VS TFQFRTWN+AG LLF ELQ SG +
Sbjct: 361 SFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGELQRGSGSFV 420
Query: 421 LFLSDGKLKSNLYQPGKLPSDITAGVELNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLL 480
LFL DGKLK +L+Q G+ P ++TAG LNDGQWHSVS SAK +H++V VD A PL+
Sbjct: 421 LFLKDGKLKLSLFQAGQSPRNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDDDTA-VQPLV 479
Query: 481 GPEQIYSGGTYYFGGCPDKSFGSKCKSPLGGFQGCMRLISISGKVVDLISVQQGSLGNFS 540
I SG TYYFGGC S GS CKSPLGGFQGC+RLI+I K VD I VQQG+LG+F
Sbjct: 480 AV-LIDSGDTYYFGGCLGNSSGSGCKSPLGGFQGCLRLITIGDKAVDPILVQQGALGSFR 538
Query: 541 DLQIDSCGISDRCLPNYCEHGGECSQSWSTFHCNCTNTGYRGATCHNSIYEQSCEAYKHR 600
DLQIDSCGI+DRCLP+YCEHGGECSQSW TF C+C TGY G TCH+S+YEQSCEA+KHR
Sbjct: 539 DLQIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHR 598
Query: 601 GNTSGFYYIDSDGSGPLEPFLLYCNMT-ETAWTIIQHNGSDLTRVRNTNPENPYAGF-FE 658
GN SG YYID+DGSGPL PFL+YCNMT ++AWT+++H G D +R +P + F
Sbjct: 599 GNPSGLYYIDADGSGPLGPFLVYCNMTADSAWTVVRHGGPDAVTLRGAPSGHPLSAVSFA 658
Query: 659 YVASMEQLQATINRAEHCEQEFTYYCKKSRLVNKQDGTPLSWWVGRTNETQTYWGGSSPD 718
Y A QL+A +N AE CEQ C +R + +DGTPLSWWVGRTNET T WGGS PD
Sbjct: 659 YAAGAGQLRAAVNLAERCEQRLALRCGTARRPDSRDGTPLSWWVGRTNETHTSWGGSLPD 718
Query: 719 LQKCTCGLEGNCIDSQYYCNCDADRNEWTNDTGLLAYKEHLPVTKIVITDTGRLHSEAAY 778
QKCTCGLEGNCIDSQYYCNCDA +NEWT+DT +L+ KEHLPVT+IV+TDTG+ HSEA Y
Sbjct: 719 AQKCTCGLEGNCIDSQYYCNCDAGQNEWTSDTIVLSQKEHLPVTQIVMTDTGQPHSEADY 778
Query: 779 KLGPLLCQGDRSFWNSASFDTEASYLHFPTFHGELSADVSFFFKTTASSGVFLENLGIAD 838
LGPLLC+GD+SFWNSASF+TE SYLHFP FHGEL+ADV FFFKTT SSGVF+ENLGI D
Sbjct: 779 TLGPLLCRGDKSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGITD 838
Query: 839 FIRIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQVDQLTPK 898
FIRIELR+PT VTFSFDVGNGP E++VQSPT FNDNQWHHVR ERN+K ASLQVDQL K
Sbjct: 839 FIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQK 898
Query: 899 TQPAPADGHVLLQLNSQLFVGGTATRQRGFLGCIRSLQLNGMTLDLEERAQVTPEVQPGC 958
QPAPADGHV LQLNSQLF+GGTATRQRGFLGCIRSLQLNG+ LDLEERA VTP V+PGC
Sbjct: 899 MQPAPADGHVRLQLNSQLFIGGTATRQRGFLGCIRSLQLNGVALDLEERATVTPGVEPGC 958
Query: 959 RGHCSSYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQENY 1018
GHCS+YG LCRNGG+CRE+ G CDC FSAY GPFCSNEISAYF +GSS+ Y+FQE+Y
Sbjct: 959 AGHCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEISAYFATGSSMTYHFQEHY 1018
Query: 1019 LLSKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQI 1078
LS+NSSS +S + D+ L+REMI SFRTTR+PSLLL+VSSFY+EYLSVI+A NGSLQI
Sbjct: 1019 TLSENSSSLVSSLYRDVTLTREMITLSFRTTRSPSLLLYVSSFYEEYLSVILANNGSLQI 1078
Query: 1079 RYKLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIEIDDNRRRQVHLSSGTEFSAV 1138
RYKL+++Q PD FDFKNMADGQLH + INREE VV +E++ + ++QV LSSGTEF+AV
Sbjct: 1079 RYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQSAKKQVILSSGTEFNAV 1138
Query: 1139 KSLVLGRILEHSDVDQDTALAGAQGFTGCLSAVQLSHVAPLKAALHPSHPDPVTVTGHVT 1198
KSL+LG++LE + D DT A GFTGCLSAV+ APLKAAL PS P VTV GHV
Sbjct: 1139 KSLILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRAAPLKAALRPSGPSRVTVRGHVA 1198
Query: 1199 E-SSCMAQPGTDATSRE---RTHSFADHSGTIDDREPLANAIKSDSAVIGGLIAVVIFIL 1254
+ C A + + +RE R A SG +D+ EPL NA + DSAV+GG+IAVVIFIL
Sbjct: 1199 PMARCAAGAASGSPARELAPRLAGGAGRSGPVDEGEPLVNADRRDSAVMGGVIAVVIFIL 1258
Query: 1255 LCITAIAVRIYQQKRLYKRSEAKRSE 1280
LCITAIA+RIYQQ++L K +E+K S+
Sbjct: 1259 LCITAIAIRIYQQRKLRKENESKVSK 1284
>gi|18640734 contactin associated protein-like 5 [Homo sapiens]
Length = 1306
Score = 1595 bits (4130), Expect = 0.0
Identities = 762/1299 (58%), Positives = 982/1299 (75%), Gaps = 7/1299 (0%)
Query: 12 LLLLSTQNWNRVEAGNSYDCDDPLVSALPQASFSSSSELSSSHGPGFARLNRRDGAGGWS 71
L LL + W+ +Y+CDDPL S L +FSSSS+L+ +H P A+LN R G GGWS
Sbjct: 11 LTLLFSGLWHLGLTATNYNCDDPLASLLSPMAFSSSSDLTGTHSP--AQLNWRVGTGGWS 68
Query: 72 PLVSNKYQWLQIDLGERMEVTAVATQGGYGSSNWVTSYLLMFSDSGWNWKQYRQEDSIWG 131
P SN QWLQ+DLG R+E+TAVATQG YGSS+WVTSY LMFSD+G NWKQY+QEDSIW
Sbjct: 69 PADSNAQQWLQMDLGNRVEITAVATQGRYGSSDWVTSYSLMFSDTGRNWKQYKQEDSIWT 128
Query: 132 FSGNANADSVVYYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGCAYRSEVVDLDGKSS 191
F+GN NADSVV+++L S++ARF+RF+PLEWNP G+IGMR+EV+GC+Y+S+V D DG+SS
Sbjct: 129 FAGNMNADSVVHHKLLHSVRARFVRFVPLEWNPSGKIGMRVEVYGCSYKSDVADFDGRSS 188
Query: 192 LLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREGPNGDHITLQLRRARLFLLINSGEAK 251
LLYRF+QK +S +KD+ISLKFK+MQ DG+L H EG GDHITL+L++ RL L +N G++K
Sbjct: 189 LLYRFNQKLMSTLKDVISLKFKSMQGDGVLFHGEGQRGDHITLELQKGRLALHLNLGDSK 248
Query: 252 LPSTSTLVNLTLGSLLDDQHWHSVLIQRLGKQVNFTVDEHRHHFHARGEFNLMNLDYEIS 311
+S+L + TLGSLLDDQHWHSVLI+R+GKQVNFTVD+H HF +GE + +++DYE+S
Sbjct: 249 ARLSSSLPSATLGSLLDDQHWHSVLIERVGKQVNFTVDKHTQHFRTKGETDALDIDYELS 308
Query: 312 FGGIPAPGKSVSFPHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNVSFSCSQPQSMP 371
FGGIP PGK +F +NFHGC+ENLYYNGV+IIDLAK++K QI GNV+FSCS+PQ +P
Sbjct: 309 FGGIPVPGKPGTFLKKNFHGCIENLYYNGVNIIDLAKRRKHQIYT-GNVTFSCSEPQIVP 367
Query: 372 VTFL-SSRSYLALPDFSGEEEVSATFQFRTWNKAGLLLFSELQLISGGILLFLSDGKLKS 430
+TF+ SS SYL LP + +S +FQFRTWNK GLLL +EL SG +LL L G L+
Sbjct: 368 ITFVNSSGSYLLLPGTPQIDGLSVSFQFRTWNKDGLLLSTELSEGSGTLLLSLEGGILRL 427
Query: 431 NLYQPGKLPSDITAGVELNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLLGPEQIYSGGT 490
+ + + ++I G LNDG WHSVS++A++N +++ +D + A AP QIYSG +
Sbjct: 428 VIQKMTERVAEILTGSNLNDGLWHSVSINARRNRITLTLDDEAAPPAPDSTWVQIYSGNS 487
Query: 491 YYFGGCPDKSFGSKCKSPLGGFQGCMRLISISGKVVDLISVQQGSLGNFSDLQIDSCGIS 550
YYFGGCPD S+C +P+ FQGCMRLI I + DLISVQQGSLGNFSDL ID C I
Sbjct: 488 YYFGGCPDNLTDSQCLNPIKAFQGCMRLIFIDNQPKDLISVQQGSLGNFSDLHIDLCSIK 547
Query: 551 DRCLPNYCEHGGECSQSWSTFHCNCTNTGYRGATCHNSIYEQSCEAYKHRGNTSGFYYID 610
DRCLPNYCEHGG CSQSW+TF+CNC++T Y GATCHNSIYEQSCE Y+H+GNT+GF+YID
Sbjct: 548 DRCLPNYCEHGGSCSQSWTTFYCNCSDTSYTGATCHNSIYEQSCEVYRHQGNTAGFFYID 607
Query: 611 SDGSGPLEPFLLYCNMTETA-WTIIQHNGSDLTRVRNTNPENPYAGFFEYVASMEQLQAT 669
SDGSGPL P +YCN+TE WT +QHN ++LTRVR NPE PYA +Y SMEQL+A
Sbjct: 608 SDGSGPLGPLQVYCNITEDKIWTSVQHNNTELTRVRGANPEKPYAMALDYGGSMEQLEAV 667
Query: 670 INRAEHCEQEFTYYCKKSRLVNKQDGTPLSWWVGRTNETQTYWGGSSPDLQKCTCGLEGN 729
I+ +EHCEQE Y+C++SRL+N DGTP +WW+GR+NE YWGGS P +Q+C CGL+ +
Sbjct: 668 IDGSEHCEQEVAYHCRRSRLLNTPDGTPFTWWIGRSNERHPYWGGSPPGVQQCECGLDES 727
Query: 730 CIDSQYYCNCDADRNEWTNDTGLLAYKEHLPVTKIVITDTGRLHSEAAYKLGPLLCQGDR 789
C+D Q++CNCDAD++EWTNDTG L++K+HLPVT+IVITDT R +SEAA+++GPL C GDR
Sbjct: 728 CLDIQHFCNCDADKDEWTNDTGFLSFKDHLPVTQIVITDTDRSNSEAAWRIGPLRCYGDR 787
Query: 790 SFWNSASFDTEASYLHFPTFHGELSADVSFFFKTTASSGVFLENLGIADFIRIELRSPTV 849
FWN+ SF TEASYLHFPTFH E SAD+SFFFKTTA SGVFLENLGI DFIR+E+ SP+
Sbjct: 788 RFWNAVSFYTEASYLHFPTFHAEFSADISFFFKTTALSGVFLENLGIKDFIRLEISSPSE 847
Query: 850 VTFSFDVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQPAPADGHVL 909
+TF+ DVGNGP E+ VQSP+ NDNQWH+VR ERN+KE SLQVD L T+ +GH
Sbjct: 848 ITFAIDVGNGPVELVVQSPSLLNDNQWHYVRAERNLKETSLQVDNLPRSTRETSEEGHFR 907
Query: 910 LQLNSQLFVGGTATRQRGFLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRGHCSSYGKLC 969
LQLNSQLFVGGT++RQ+GFLGCIRSL LNG +DLEERA+VT V+PGC GHCSSYG +C
Sbjct: 908 LQLNSQLFVGGTSSRQKGFLGCIRSLHLNGQKMDLEERAKVTSGVRPGCPGHCSSYGSIC 967
Query: 970 RNGGKCRERPIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQENYLLSKNSSSHAA 1029
NGGKC E+ G+ CDCT S Y GPFC E+SA F +G+SV Y FQE Y ++KN S ++
Sbjct: 968 HNGGKCVEKHNGYLCDCTNSPYEGPFCKKEVSAVFEAGTSVTYMFQEPYPVTKNISLSSS 1027
Query: 1030 SFHGDMKLSREMIKFSFRTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQIRYKLNKYQEPD 1089
+ + D S+E I SF TT+ PSLLLF++S ++++ V++ KNGSLQ+RY LNK +E
Sbjct: 1028 AIYTDSAPSKENIALSFVTTQAPSLLLFINSSSQDFVVVLLCKNGSLQVRYHLNK-EETH 1086
Query: 1090 VVNFDFKNMADGQLHHIMINREEGVVFIEIDDNRRRQVHLSSGTEFSAVKSLVLGRILEH 1149
V D N A+ ++HH+ INRE + I++D R + S EF ++SL LG++ E+
Sbjct: 1087 VFTIDADNFANRRMHHLKINREGRELTIQMDQQLRLSYNFSPEVEFRVIRSLTLGKVTEN 1146
Query: 1150 SDVDQDTALAGAQGFTGCLSAVQLSHVAPLKAALHPSHPDPVTVTGHVTESSCMAQPGTD 1209
+D + A A A GF GC+S+VQ +H+APLKAAL + PVTV G +TESSC +D
Sbjct: 1147 LGLDSEVAKANAMGFAGCMSSVQYNHIAPLKAALRHATVAPVTVHGTLTESSCGFMVDSD 1206
Query: 1210 ATSRERTHSFADHSGTIDDREPLANAIKSDSAVIGGLIAVVIFILLCITAIAVR-IYQQK 1268
+ HS +D G D+REPL NA++SDSAVIGG+IAVVIFI+ CI I R +YQ K
Sbjct: 1207 VNAVTTVHSSSDPFGKTDEREPLTNAVRSDSAVIGGVIAVVIFIIFCIIGIMTRFLYQHK 1266
Query: 1269 RLYKRSEAKRSENVDSAEAVLKSELNIQNAVNENQKEYF 1307
+ ++ S+ K E ++ ++ ++E+++QN V+E ++EYF
Sbjct: 1267 QSHRTSQMKEKEYPENLDSSFRNEIDLQNTVSECKREYF 1305
>gi|239743756 PREDICTED: hypothetical protein LOC389722 isoform 2
[Homo sapiens]
Length = 1207
Score = 1378 bits (3567), Expect = 0.0
Identities = 659/919 (71%), Positives = 760/919 (82%), Gaps = 3/919 (0%)
Query: 1 MGSVTGAVLKTLLLLSTQNWNRVEAGNSYDCDDPLVSALPQASFSSSSELSSSHGPGFAR 60
M SV AVLK LLLL TQ W+ V AGN DCD PL SALP++SFSSSSELSSSHGPGF+R
Sbjct: 1 MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCDSPLASALPRSSFSSSSELSSSHGPGFSR 60
Query: 61 LNRRDGAGGWSPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSNWVTSYLLMFSDSGWNW 120
LNRRDGAGGW+PLVSNKYQWLQIDLGERMEVTAVATQGGYGSS+WVTSYLLMFSD G NW
Sbjct: 61 LNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMFSDGGRNW 120
Query: 121 KQYRQEDSIWGFSGNANADSVVYYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGCAYR 180
KQYR+E+SIWGF GN NADSVV+YRLQP +ARFLRF+PL WNP+GRIGMRIEV+GCAY+
Sbjct: 121 KQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYK 180
Query: 181 SEVVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREGPNGDHITLQLRRAR 240
SEVV DG+S+LLY D+K L PI+D+ISLKFK MQS+GILLHREG +G+HITL+L + +
Sbjct: 181 SEVVYFDGQSALLYTLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKGK 240
Query: 241 LFLLINSGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRLGKQVNFTVDEHRHHFHARGE 300
L +NSG AKLPST V LTLGSLLDDQHWHSVLI+ L QVNFTVD+H HHF A+G+
Sbjct: 241 LVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELLDTQVNFTVDKHTHHFQAKGD 300
Query: 301 FNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNV 360
+ ++L++EISFGGI +PG+S +F ++FHGCLENLYYNGVD+ +LAK+ KPQI+ MGNV
Sbjct: 301 SSNLDLNFEISFGGILSPGRSRAFTRKSFHGCLENLYYNGVDVTELAKKHKPQILMMGNV 360
Query: 361 SFSCSQPQSMPVTFLSSRSYLALPDFSGEEEVSATFQFRTWNKAGLLLFSELQLISGGIL 420
SFSC QPQ++PVTFLSSRSYLALP SGE++VS TFQFRTWN+AG LLF ELQ SG +
Sbjct: 361 SFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVSVTFQFRTWNRAGHLLFGELQRGSGSFV 420
Query: 421 LFLSDGKLKSNLYQPGKLPSDITAGVELNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLL 480
LFL DGKLK +L+Q G+ P ++TAG LNDGQWHSVS SAK +H++V VD A PL+
Sbjct: 421 LFLKDGKLKLSLFQAGQSPRNVTAGAGLNDGQWHSVSFSAKWSHMNVVVDDDTA-VQPLV 479
Query: 481 GPEQIYSGGTYYFGGCPDKSFGSKCKSPLGGFQGCMRLISISGKVVDLISVQQGSLGNFS 540
I SG TYYFGGC S GS CKSPLGGFQGC+RLI+I K VD I VQQG+LG+F
Sbjct: 480 A-VLIDSGDTYYFGGCLGNSSGSGCKSPLGGFQGCLRLITIGDKAVDPILVQQGALGSFR 538
Query: 541 DLQIDSCGISDRCLPNYCEHGGECSQSWSTFHCNCTNTGYRGATCHNSIYEQSCEAYKHR 600
DLQIDSCGI+DRCLP+YCEHGGECSQSW TF C+C TGY G TCH+S+YEQSCEA+KHR
Sbjct: 539 DLQIDSCGITDRCLPSYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHR 598
Query: 601 GNTSGFYYIDSDGSGPLEPFLLYCNMTETAWTIIQHNGSDLTRVRNTNPENPYAGF-FEY 659
GN SG YYID+DGSGPL PFL+YCNMT++AWT+++H G D +R +P + F Y
Sbjct: 599 GNPSGLYYIDADGSGPLGPFLVYCNMTDSAWTVVRHGGPDAVTLRGAPSGHPLSAVSFAY 658
Query: 660 VASMEQLQATINRAEHCEQEFTYYCKKSRLVNKQDGTPLSWWVGRTNETQTYWGGSSPDL 719
A QL+A +N AE CEQ C +R + +DGTPLSWWVGRTNET T WGGS PD
Sbjct: 659 AAGAGQLRAAVNLAERCEQRLALRCGTARRPDSRDGTPLSWWVGRTNETHTSWGGSLPDA 718
Query: 720 QKCTCGLEGNCIDSQYYCNCDADRNEWTNDTGLLAYKEHLPVTKIVITDTGRLHSEAAYK 779
QKCTCGLEGNCIDSQYYCNCDA +NEWT+DT +L+ KEHLPVT+IV+TDTG+ HSEA Y
Sbjct: 719 QKCTCGLEGNCIDSQYYCNCDAGQNEWTSDTIVLSQKEHLPVTQIVMTDTGQPHSEADYT 778
Query: 780 LGPLLCQGDRSFWNSASFDTEASYLHFPTFHGELSADVSFFFKTTASSGVFLENLGIADF 839
LGPLLC+GD+SFWNSASF+TE SYLHFP FHGEL+ADV FFFKTT SSGVF+ENLGI DF
Sbjct: 779 LGPLLCRGDKSFWNSASFNTETSYLHFPAFHGELTADVCFFFKTTVSSGVFMENLGITDF 838
Query: 840 IRIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQVDQLTPKT 899
IRIELR+PT VTFSFDVGNGP E++VQSPT FNDNQWHHVR ERN+K ASLQVDQL K
Sbjct: 839 IRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKM 898
Query: 900 QPAPADGHVLLQLNSQLFV 918
QPAPADGHV LQLNSQLF+
Sbjct: 899 QPAPADGHVRLQLNSQLFI 917
Score = 336 bits (861), Expect = 1e-91
Identities = 175/286 (61%), Positives = 219/286 (76%), Gaps = 4/286 (1%)
Query: 999 EISAYFGSGSSVIYNFQENYLLSKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFV 1058
EISAYF +GSS+ Y+FQE+Y LS+NSSS +S + D+ L+REMI SFRTTR+PSLLL+V
Sbjct: 918 EISAYFATGSSMTYHFQEHYTLSENSSSLVSSLYRDVTLTREMITLSFRTTRSPSLLLYV 977
Query: 1059 SSFYKEYLSVIIAKNGSLQIRYKLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIE 1118
SSFY+EYLSVI+A NGSLQIRYKL+++Q PD FDFKNMADGQLH + INREE VV +E
Sbjct: 978 SSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVE 1037
Query: 1119 IDDNRRRQVHLSSGTEFSAVKSLVLGRILEHSDVDQDTALAGAQGFTGCLSAVQLSHVAP 1178
++ + ++QV LSSGTEF+AVKSL+LG++LE + D DT A GFTGCLSAV+ AP
Sbjct: 1038 VNQSAKKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGRAAP 1097
Query: 1179 LKAALHPSHPDPVTVTGHVTE-SSCMAQPGTDATSRE---RTHSFADHSGTIDDREPLAN 1234
LKAAL PS P VTV GHV + C A + + +RE R A SG +D+ EPL N
Sbjct: 1098 LKAALRPSGPSRVTVRGHVAPMARCAAGAASGSPARELAPRLAGGAGRSGPVDEGEPLVN 1157
Query: 1235 AIKSDSAVIGGLIAVVIFILLCITAIAVRIYQQKRLYKRSEAKRSE 1280
A + DSAV+GG+IAVVIFILLCITAIA+RIYQQ++L K +E+K S+
Sbjct: 1158 ADRRDSAVMGGVIAVVIFILLCITAIAIRIYQQRKLRKENESKVSK 1203
Score = 58.2 bits (139), Expect = 5e-08
Identities = 64/268 (23%), Positives = 98/268 (36%), Gaps = 38/268 (14%)
Query: 757 EHLPVTKIVITDTGRLHSEAAYKLGPLLCQGDRSFWNSASFDTEASYLHFPTFHGELSAD 816
E+L + +T+ + H +G + + +F + SYL P GE
Sbjct: 334 ENLYYNGVDVTELAKKHKPQILMMGNVSFSCPQPQTVPVTFLSSRSYLALPGNSGEDKVS 393
Query: 817 VSFFFKTTASSGVFLEN---LGIADFIRIELRSPTVVTFSFDVGNGPFEISVQSPTHFND 873
V+F F+T +G L G F+ + L+ + F G P ++ + ND
Sbjct: 394 VTFQFRTWNRAGHLLFGELQRGSGSFV-LFLKDGKLKLSLFQAGQSPRNVTAGAG--LND 450
Query: 874 NQWHHVRVERNMKEASLQVDQLTPKTQPAPADGHVLLQLNSQLFVGGTATRQRG------ 927
QWH V ++ VD T QP A VL+ + GG G
Sbjct: 451 GQWHSVSFSAKWSHMNVVVDDDTA-VQPLVA---VLIDSGDTYYFGGCLGNSSGSGCKSP 506
Query: 928 ---FLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRG-----HCSSYG-------KLCRNG 972
F GC+R + + +D VQ G G S G C +G
Sbjct: 507 LGGFQGCLRLITIGDKAVD-------PILVQQGALGSFRDLQIDSCGITDRCLPSYCEHG 559
Query: 973 GKCRERPIGFFCDCTFSAYTGPFCSNEI 1000
G+C + F CDC + YTG C + +
Sbjct: 560 GECSQSWDTFSCDCLGTGYTGETCHSSL 587
>gi|7662350 cell recognition molecule Caspr2 precursor [Homo sapiens]
Length = 1331
Score = 1286 bits (3328), Expect = 0.0
Identities = 634/1302 (48%), Positives = 873/1302 (67%), Gaps = 27/1302 (2%)
Query: 28 SYDCDDPLVSALPQASFSSSSELSSSHGPGFARLNRRDGAGGWSPLVSNKYQWLQIDLGE 87
S CD+PLVS LP +FSSSS +S S+ PG+A++N+R GAGGWSP S+ YQWLQ+D G
Sbjct: 32 SQKCDEPLVSGLPHVAFSSSSSISGSYSPGYAKINKRGGAGGWSPSDSDHYQWLQVDFGN 91
Query: 88 RMEVTAVATQGGYGSSNWVTSYLLMFSDSGWNWKQYRQEDSIWGFSGNANADSVVYYRLQ 147
R +++A+ATQG Y SS+WVT Y +++SD+G NWK Y Q+ +IW F GN N+D VV + LQ
Sbjct: 92 RKQISAIATQGRYSSSDWVTQYRMLYSDTGRNWKPYHQDGNIWAFPGNINSDGVVRHELQ 151
Query: 148 PSIKARFLRFIPLEWNPKGRIGMRIEVFGCAYRSEVVDLDGKSSLLYRFDQKSLSPIKDI 207
I AR++R +PL+WN +GRIG+RIEV+GC+Y ++V++ DG L YRF K + +KD+
Sbjct: 152 HPIIARYVRIVPLDWNGEGRIGLRIEVYGCSYWADVINFDGHVVLPYRFRNKKMKTLKDV 211
Query: 208 ISLKFKTMQSDGILLHREGPNGDHITLQLRRARLFLLINSGEAKLPSTSTLVNLTLGSLL 267
I+L FKT +S+G++LH EG GD+ITL+L++A+L L +N G +L ++ GSLL
Sbjct: 212 IALNFKTSESEGVILHGEGQQGDYITLELKKAKLVLSLNLGSNQLGPIYGHTSVMTGSLL 271
Query: 268 DDQHWHSVLIQRLGKQVNFTVDEHRHHFHARGEFNLMNLDYEISFGGIPAPGKSVSFPHR 327
DD HWHSV+I+R G+ +N T+D HF GEF+ ++LDYEI+FGGIP GK S +
Sbjct: 272 DDHHWHSVVIERQGRSINLTLDRSMQHFRTNGEFDYLDLDYEITFGGIPFSGKPSSSSRK 331
Query: 328 NFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNVSFSCSQPQSMPVTFLSSRSYLALPDFS 387
NF GC+E++ YNGV+I DLA+++K + +GN+SFSC +P ++PV F ++ SYL +P
Sbjct: 332 NFKGCMESINYNGVNITDLARRKKLEPSNVGNLSFSCVEPYTVPV-FFNATSYLEVPGRL 390
Query: 388 GEEEVSATFQFRTWNKAGLLLFSELQLISGGILLFLSDGK--LKSNLYQPGKLPSDITAG 445
++ S +FQFRTWN GLL+FS G + + L++ K + N+ Q DI++G
Sbjct: 391 NQDLFSVSFQFRTWNPNGLLVFSHFADNLGNVEIDLTESKVGVHINITQTKMSQIDISSG 450
Query: 446 VELNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLLGPEQIYSGGTYYFGGCPDKSFGSKC 505
LNDGQWH V AK+N + +DG ASA P Q+ +G Y+FGG ++ S
Sbjct: 451 SGLNDGQWHEVRFLAKENFAILTIDGDEASAVRTNSPLQVKTGEKYFFGGFLNQMNNSSH 510
Query: 506 KSPLGGFQGCMRLISISGKVVDLISVQQGSLGNFSDLQIDSCGISDRCLPNYCEHGGECS 565
FQGCM+LI + ++V+L V Q G+F+++ ID C I DRC+PN+CEHGG+CS
Sbjct: 511 SVLQPSFQGCMQLIQVDDQLVNLYEVAQRKPGSFANVSIDMCAIIDRCVPNHCEHGGKCS 570
Query: 566 QSWSTFHCNCTNTGYRGATCHNSIYEQSCEAYKHRGNTSGFYYIDSDGSGPLEPFLLYCN 625
Q+W +F C C TGY GATCHNSIYE SCEAYKH G TS +Y+ID DGSGPL P +YCN
Sbjct: 571 QTWDSFKCTCDETGYSGATCHNSIYEPSCEAYKHLGQTSNYYWIDPDGSGPLGPLKVYCN 630
Query: 626 MTE-TAWTIIQHNGSDLTRVRNTNPENPYAGFFEYVASMEQLQATINRAEHCEQEFTYYC 684
MTE WTI+ H+ T V NPE Y ASM+Q+ A + AE+CEQ +Y+C
Sbjct: 631 MTEDKVWTIVSHDLQMQTPVVGYNPEKYSVTQLVYSASMDQISAITDSAEYCEQYVSYFC 690
Query: 685 KKSRLVNKQDGTPLSWWVGRTNETQTYWGGSSPDLQKCTCGLEGNCIDSQYYCNCDADRN 744
K SRL+N DG+P +WWVG+ NE YWGGS P +QKC CG+E NC D +YYCNCDAD
Sbjct: 691 KMSRLLNTPDGSPYTWWVGKANEKHYYWGGSGPGIQKCACGIERNCTDPKYYCNCDADYK 750
Query: 745 EWTNDTGLLAYKEHLPVTKIVITDTGRLHSEAAYKLGPLLCQGDRSFWNSASFDTEASYL 804
+W D G L+YK+HLPV+++V+ DT R SEA +GPL CQGDR++WN+ASF +SYL
Sbjct: 751 QWRKDAGFLSYKDHLPVSQVVVGDTDRQGSEAKLSVGPLRCQGDRNYWNAASFPNPSSYL 810
Query: 805 HFPTFHGELSADVSFFFKTTASSGVFLENLGIADFIRIELRSPTVVTFSFDVGNGPFEIS 864
HF TF GE SAD+SF+FKT GVFLEN+G DFI++EL+S T V+FSFDVGNGP EI
Sbjct: 811 HFSTFQGETSADISFYFKTLTPWGVFLENMGKEDFIKLELKSATEVSFSFDVGNGPVEIV 870
Query: 865 VQSPTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQPAPADGHVLLQLNSQLFVGGTATR 924
V+SPT ND+QWH V ERN+K+ASLQVD+L + + AP +GH L+L SQLFVGG A
Sbjct: 871 VRSPTPLNDDQWHRVTAERNVKQASLQVDRLPQQIRKAPTEGHTRLELYSQLFVGG-AGG 929
Query: 925 QRGFLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRGHCSSYGKLCRNGGKCRERPIGFFC 984
Q+GFLGCIRSL++NG+TLDLEERA+VT GC GHC+SYG C NGGKC ER G+ C
Sbjct: 930 QQGFLGCIRSLRMNGVTLDLEERAKVTSGFISGCSGHCTSYGTNCENGGKCLERYHGYSC 989
Query: 985 DCTFSAYTGPFCSNEISAYFGSGSSVIYNFQENYLLSKNSSSHA------ASFHGDMKLS 1038
DC+ +AY G FC+ ++ A+F G + YNFQ +++SSS + H D L+
Sbjct: 990 DCSNTAYDGTFCNKDVGAFFEEGMWLRYNFQAPATNARDSSSRVDNAPDQQNSHPD--LA 1047
Query: 1039 REMIKFSFRTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQIRYKLNKYQEPDVVNFDFKNM 1098
+E I+FSF TT+ P +LL++SSF ++L+V++ GSLQIRY L +EP ++ D +NM
Sbjct: 1048 QEEIRFSFSTTKAPCILLYISSFTTDFLAVLVKPTGSLQIRYNLGGTREPYNIDVDHRNM 1107
Query: 1099 ADGQLHHIMINREEGVVFIEIDDNRRRQVHL--SSGTEFSAVKSLVLGRILEHSDVDQDT 1156
A+GQ H + I R E +F+++D HL SS T F++ KSL LG+++E +DQ+
Sbjct: 1108 ANGQPHSVNITRHEKTIFLKLDHYPSVSYHLPSSSDTLFNSPKSLFLGKVIETGKIDQEI 1167
Query: 1157 ALAGAQGFTGCLSAVQLSHVAPLKAALHPSHPDP-VTVTGHVTESSCMAQPGTDATSRER 1215
GFTGCLS VQ + +APLKAAL ++ V + G + ES+C A P T +
Sbjct: 1168 HKYNTPGFTGCLSRVQFNQIAPLKAALRQTNASAHVHIQGELVESNCGASPLTLSPMSSA 1227
Query: 1216 THSF---------ADHSGTIDDREPLANAIKSDSAVIGGLIAVVIFILLCITAIAVR-IY 1265
T + AD + + N + +SA+IGG+IAVVIF +LC +R ++
Sbjct: 1228 TDPWHLDHLDSASADFPYNPGQGQAIRNGVNRNSAIIGGVIAVVIFTILCTLVFLIRYMF 1287
Query: 1266 QQKRLYKRSEAKRSENVDSAE-AVLKSELNIQNAVNENQKEY 1306
+ K Y +EAK +E+ +SA+ A++ ++ N ++E++KE+
Sbjct: 1288 RHKGTYHTNEAKGAESAESADAAIMNNDPNFTETIDESKKEW 1329
>gi|4505463 contactin associated protein 1 precursor [Homo sapiens]
Length = 1384
Score = 931 bits (2406), Expect = 0.0
Identities = 478/1244 (38%), Positives = 722/1244 (58%), Gaps = 68/1244 (5%)
Query: 24 EAGNSYDCDDPLVSALPQASFSSSSELSSSHGPGFARLNRRDGAGGWSPLVSNKYQWLQI 83
E Y CD+ LV L S +SS S P FARL+ G GWSP + + WLQI
Sbjct: 18 EGWGYYGCDEELVGPLYARSLGASSYYSLLTAPRFARLH---GISGWSPRIGDPNPWLQI 74
Query: 84 DLGERMEVTAVATQGGYGSSNWVTSYLLMFSDSGWNWKQYRQEDSIWGFSGNANADSVVY 143
DL ++ + AVATQG + S +WVT Y+L++ D +W + Q F GN N +VV
Sbjct: 75 DLMKKHRIRAVATQGSFNSWDWVTRYMLLYGDRVDSWTPFYQRGHNSTFFGNVNESAVVR 134
Query: 144 YRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGCAYRSEVVDLDGKSSLLYRFDQKSLSP 203
+ L AR++R +PL WNP+G+IG+R+ ++GC Y+++++ DG ++ YRF +
Sbjct: 135 HDLHFHFTARYIRIVPLAWNPRGKIGLRLGLYGCPYKADILYFDGDDAISYRFPRGVSRS 194
Query: 204 IKDIISLKFKTMQSDGILLHREGPNGDHITLQLRRARLFLLINSGEAKLPSTSTLVNLTL 263
+ D+ + FKT + DG+LLH EG GD++TL+L A L L ++ G + + ++
Sbjct: 195 LWDVFAFSFKTEEKDGLLLHAEGAQGDYVTLELEGAHLLLHMSLGSSPIQPRPGHTTVSA 254
Query: 264 GSLLDDQHWHSVLIQRLGKQVNFTVDEHRHHFHARGEFNLMNLDYEISFGG-IPAPGKSV 322
G +L+DQHWH V + R G+ VNFT+D + F G+F +NLD E+ GG + A K++
Sbjct: 255 GGVLNDQHWHYVRVDRFGRDVNFTLDGYVQRFILNGDFERLNLDTEMFIGGLVGAARKNL 314
Query: 323 SFPHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNVSFSCSQPQSMPVTFLSSRSYLA 382
++ H NF GC+EN+ +N V+I DLA ++ +I G V+F C P P+ F +++
Sbjct: 315 AYRH-NFRGCIENVIFNRVNIADLAVRRHSRITFEGKVAFRCLDPVPHPINFGGPHNFVQ 373
Query: 383 LPDFSGEEEVSATFQFRTWNKAGLLLFSELQLISGGILLFLSDGKLKSNLYQPGKLPSDI 442
+P F ++ +F+FRTW+ GLLLFS L G + L LS+G++ ++ Q G+
Sbjct: 374 VPGFPRRGRLAVSFRFRTWDLTGLLLFSRLGDGLGHVELTLSEGQVNVSIAQSGRKKLQF 433
Query: 443 TAGVELNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLLGPEQIYSGGTYYFGGCPDKSFG 502
AG LNDG WH V+ A++NH +++D + + P I +G +Y+FGGCP +
Sbjct: 434 AAGYRLNDGFWHEVNFVAQENHAVISIDDVEGAEVRVSYPLLIRTGTSYFFGGCPKPASR 493
Query: 503 SKCKSPLGGFQGCMRLISISGKVVDLISVQQGSLGNFSDLQIDSCGISDRCLPNYCEHGG 562
C S F GCM L+ + G++V+L V+ LG ++++ D+CGI+DRC PN CEH G
Sbjct: 494 WDCHSNQTAFHGCMELLKVDGQLVNLTLVEGRRLGFYAEVLFDTCGITDRCSPNMCEHDG 553
Query: 563 ECSQSWSTFHCNCTNTGYRGATCHNSIYEQSCEAYKHRGNTSGFYYIDSDGSGPLEPFLL 622
C QSW F C C TGY+G TCH +Y++SCEAY+ G TSG + ID DGSGPL+PF++
Sbjct: 554 RCYQSWDDFICYCELTGYKGETCHTPLYKESCEAYRLSGKTSGNFTIDPDGSGPLKPFVV 613
Query: 623 YCNMTET-AWTIIQHNGSDLTRVRNTNPENPYAGFFEYV-ASMEQLQATINRAEHCEQEF 680
YC++ E AWT+++H+ TRV ++ E P+ G +Y AS E++ A N ++HCEQ
Sbjct: 614 YCDIRENRAWTVVRHDRLWTTRVTGSSMERPFLGAIQYWNASWEEVSALANASQHCEQWI 673
Query: 681 TYYCKKSRLVNKQDGTPLSWWVGRTNETQTYWGGSSPDLQKCTCGLEGNCIDSQYYCNCD 740
+ C SRL+N G P S+W+GR E YWGGS P +Q+C CGL+ +C+D YCNCD
Sbjct: 674 EFSCYNSRLLNTAGGYPYSFWIGRNEEQHFYWGGSQPGIQRCACGLDRSCVDPALYCNCD 733
Query: 741 ADRNEWTNDTGLLAYKEHLPVTKIVITDTGRLHSEAAYKLGPLLCQGDRSFWNSASFDTE 800
AD+ +W D GLL + +HLPVT++VI DT R SEA + L PL C GDR+ WN+ SF T
Sbjct: 734 ADQPQWRTDKGLLTFVDHLPVTQVVIGDTNRSTSEAQFFLRPLRCYGDRNSWNTISFHTG 793
Query: 801 ASYLHFPTFHGELSADVSFFFKTTASSGVFLENLG------IADFIRIELRSPTVVTFSF 854
A+ L FP S DVSF+F+T+A SGVFLEN+G ++R+EL + V F+F
Sbjct: 794 AA-LRFPPIRANHSLDVSFYFRTSAPSGVFLENMGGPYCQWRRPYVRVELNTSRDVVFAF 852
Query: 855 DVGNGPFEISVQSPT-HFNDNQWHHVRVERNMKEASLQVDQLTPKTQPAPADGHVLLQLN 913
DVGNG ++V S FND++WH VR E N+K+A L+VD +P P ++ ++ +
Sbjct: 853 DVGNGDENLTVHSDDFEFNDDEWHLVRAEINVKQARLRVDHRPWVLRPMPLQTYIWMEYD 912
Query: 914 SQLFVGGTATRQRGFLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRGHCSSYGKLCRNGG 973
L+VG ++R F+GC+R+++LNG+TL+LE RA + P C GHC+ C +GG
Sbjct: 913 QPLYVGSAELKRRPFVGCLRAMRLNGVTLNLEGRANASEGTSPNCTGHCAHPRLPCFHGG 972
Query: 974 KCRERPIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQE----------------- 1016
+C ER + CDC +A+ GP+C+++I +F G+ + YN Q
Sbjct: 973 RCVERYSYYTCDCDLTAFDGPYCNHDIGGFFEPGTWMRYNLQSALRSAAREFSHMLSRPV 1032
Query: 1017 -----NYLLSKNSSSHAASFHGD---------------------MKLSREMIKFSFRTTR 1050
Y+ ++ + +HG ++ E + FSF T+
Sbjct: 1033 PGYEPGYIPGYDTPGYVPGYHGPGYRLPDYPRPGRPVPGYRGPVYNVTGEEVSFSFSTSS 1092
Query: 1051 TPSLLLFVSSFYKEYLSVIIAKNGSLQIRYKLNKYQEPDVVNFDFKNMADGQLHHIMINR 1110
P++LL+VSSF ++Y++V+I +G+LQ+RY+L P V + + DGQ H I I R
Sbjct: 1093 APAVLLYVSSFVRDYMAVLIKDDGTLQLRYQLG--TSPYVYQLTTRPVTDGQPHSINITR 1150
Query: 1111 EEGVVFIEID--DNRRRQVHLSSGTEFSAVKSLVLGRILEHSDVDQDTALAGAQGFTGCL 1168
+FI++D ++ L ++ + K+L LGR++E +D + GF+GCL
Sbjct: 1151 VYRNLFIQVDYFPLTEQKFSLLVDSQLDSPKALYLGRVMETGVIDPEIQRYNTPGFSGCL 1210
Query: 1169 SAVQLSHVAPLKAALHPSHP------DPVTVTGHVTESSCMAQP 1206
S V+ ++VAPLK P + + V G ++ES+C A P
Sbjct: 1211 SGVRFNNVAPLKTHFRTPRPMTAELAEALRVQGELSESNCGAMP 1254
>gi|239743797 PREDICTED: similar to cell recognition molecule CASPR3
[Homo sapiens]
Length = 944
Score = 740 bits (1911), Expect = 0.0
Identities = 353/468 (75%), Positives = 400/468 (85%), Gaps = 1/468 (0%)
Query: 695 GTPLSWWVGRTNETQTYWGGSSPDLQKCTCGLEGNCIDSQYYCNCDADRNEWTNDTGLLA 754
GTPLSWWVGRTNET T WGGS PD QKCTCGLEGNCIDSQYYCNCDA RNEWT+DT +L+
Sbjct: 428 GTPLSWWVGRTNETHTSWGGSLPDAQKCTCGLEGNCIDSQYYCNCDAGRNEWTSDTIVLS 487
Query: 755 YKEHLPVTKIVITDTGRLHSEAAYKLGPLLCQGDRSFWNSASFDTEASYLHFPTFHGELS 814
KEHLPVT+IV+TD G+ HSEA Y LGPLLC+GD+SFWNSASF+TE SYLHFP FHGEL+
Sbjct: 488 QKEHLPVTQIVMTDAGQPHSEADYTLGPLLCRGDKSFWNSASFNTETSYLHFPAFHGELT 547
Query: 815 ADVSFFFKTTASSGVFLENLGIADFIRIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDN 874
ADV FFFKTT SSGVF+ENLGI DFIRIELR+PT VTFSFDVGNGP E++VQSPT FNDN
Sbjct: 548 ADVCFFFKTTVSSGVFMENLGITDFIRIELRAPTEVTFSFDVGNGPCEVTVQSPTPFNDN 607
Query: 875 QWHHVRVERNMKEASLQVDQLTPKTQPAPADGHVLLQLNSQLFVGGTATRQRGFLGCIRS 934
QWHHVR ERN+K ASLQVDQL K QPAPADGHV LQLNSQLF+GGTATRQRGFLGCIRS
Sbjct: 608 QWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLNSQLFIGGTATRQRGFLGCIRS 667
Query: 935 LQLNGMTLDLEERAQVTPEVQPGCRGHCSSYGKLCRNGGKCRERPIGFFCDCTFSAYTGP 994
LQLNG+ LDLEERA V P V+PGC GHCS+YG LCRNGG+CRE+ G CDC FSAY GP
Sbjct: 668 LQLNGVALDLEERATVMPGVEPGCAGHCSTYGHLCRNGGRCREKRRGVTCDCAFSAYDGP 727
Query: 995 FCSNEISAYFGSGSSVIYNFQENYLLSKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSL 1054
FCSNEISAYF +GSS+ Y+FQE+Y LS+NSSS +S H D+ L+REMI SFRTTRTPSL
Sbjct: 728 FCSNEISAYFATGSSMTYHFQEHYTLSENSSSLVSSLHRDVTLTREMITLSFRTTRTPSL 787
Query: 1055 LLFVSSFYKEYLSVIIAKNGSLQIRYKLNKYQEPDVVNFDFKNMADGQLHHIMINREEGV 1114
LL+VSSFY+EYLSVI+A NGSLQIRYKL+++Q PD FDFKNMADGQLH + INREE V
Sbjct: 788 LLYVSSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAV 847
Query: 1115 VFIEIDDNRRRQVHLSSGTEFSAVKSLVLGRILEHS-DVDQDTALAGA 1161
V +E++ + ++QV LSSGTEF+AVKSL+LG++L S VD+ L A
Sbjct: 848 VMVEVNQSAKKQVILSSGTEFNAVKSLILGKVLGRSGPVDEGEPLVNA 895
Score = 227 bits (579), Expect = 5e-59
Identities = 100/133 (75%), Positives = 113/133 (84%)
Query: 496 CPDKSFGSKCKSPLGGFQGCMRLISISGKVVDLISVQQGSLGNFSDLQIDSCGISDRCLP 555
C S GS CKSPLGGFQGC+RLI+I K VD I VQQG+LG+F DLQIDSCGI+DRCLP
Sbjct: 187 CLGNSSGSGCKSPLGGFQGCLRLITIGDKAVDPILVQQGALGSFRDLQIDSCGITDRCLP 246
Query: 556 NYCEHGGECSQSWSTFHCNCTNTGYRGATCHNSIYEQSCEAYKHRGNTSGFYYIDSDGSG 615
+YCEHGGECSQSW TF C+C TGY G TCH+S+YEQSCEA+KHRGN SG YYID+DGSG
Sbjct: 247 SYCEHGGECSQSWDTFSCDCLGTGYTGETCHSSLYEQSCEAHKHRGNPSGLYYIDADGSG 306
Query: 616 PLEPFLLYCNMTE 628
PL PFL+YCNMT+
Sbjct: 307 PLGPFLVYCNMTD 319
Score = 79.0 bits (193), Expect = 3e-14
Identities = 39/58 (67%), Positives = 49/58 (84%)
Query: 1223 SGTIDDREPLANAIKSDSAVIGGLIAVVIFILLCITAIAVRIYQQKRLYKRSEAKRSE 1280
SG +D+ EPL NA + DSAVIGG+IAV IFILLCITAIA+RIYQQ++L K +E+K S+
Sbjct: 883 SGPVDEGEPLVNADRRDSAVIGGVIAVEIFILLCITAIAIRIYQQRKLRKENESKVSK 940
Score = 65.1 bits (157), Expect = 4e-10
Identities = 84/345 (24%), Positives = 127/345 (36%), Gaps = 71/345 (20%)
Query: 373 TFLSSRSYLALPDFSGEEEVSATFQFRTWNKAGLLLFSELQLISGGILLFLSDGKLKSNL 432
+F + SYL P F GE F F+T +G+ F E I+ I + L +
Sbjct: 529 SFNTETSYLHFPAFHGELTADVCFFFKTTVSSGV--FMENLGITDFIRIELRAPTEVTFS 586
Query: 433 YQPGKLPSDIT--AGVELNDGQWHSVSLSAKKNHLSVAVDG--QMASAAPLLGPEQIYSG 488
+ G P ++T + ND QWH V S+ VD Q AP G ++
Sbjct: 587 FDVGNGPCEVTVQSPTPFNDNQWHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQLN 646
Query: 489 GTYYFGGCPDKSFGSKCKSPLGGFQGCMRLISISGKVVDLIS-------VQQGSLGNFSD 541
+ GG + GF GC+R + ++G +DL V+ G G+ S
Sbjct: 647 SQLFIGGTATRQ---------RGFLGCIRSLQLNGVALDLEERATVMPGVEPGCAGHCST 697
Query: 542 LQIDSCGISDRCLPNYCEHGGECSQSWSTFHCNCTNTGYRGATCHNSIYEQSCEAYKHRG 601
+ C +GG C + C+C + Y G C N I AY G
Sbjct: 698 YG------------HLCRNGGRCREKRRGVTCDCAFSAYDGPFCSNEI-----SAYFATG 740
Query: 602 NTSGF----YYIDSDGSGPL------------------------EPFLLYCN--MTETAW 631
++ + +Y S+ S L LLY + E
Sbjct: 741 SSMTYHFQEHYTLSENSSSLVSSLHRDVTLTREMITLSFRTTRTPSLLLYVSSFYEEYLS 800
Query: 632 TIIQHNGSDLTRVRNTNPENPYAGFFEY--VASMEQLQATINRAE 674
I+ +NGS R + +NP A F++ +A + Q INR E
Sbjct: 801 VILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREE 845
Score = 35.0 bits (79), Expect = 0.47
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 18/76 (23%)
Query: 925 QRGFLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRGHCSSYGKLCRNGGKCRERPIGFFC 984
Q+G LG R LQ++ +T P SY C +GG+C + F C
Sbjct: 223 QQGALGSFRDLQIDS--------CGITDRCLP-------SY---CEHGGECSQSWDTFSC 264
Query: 985 DCTFSAYTGPFCSNEI 1000
DC + YTG C + +
Sbjct: 265 DCLGTGYTGETCHSSL 280
Score = 31.2 bits (69), Expect = 6.8
Identities = 36/133 (27%), Positives = 54/133 (40%), Gaps = 16/133 (12%)
Query: 212 FKTMQSDGILLHREGPNGDHITLQLRRARLFLLINSGEAKLPSTSTLVNLTLGSLLDDQH 271
FKT S G+ + G D I ++LR A + + P T+ + T +D
Sbjct: 554 FKTTVSSGVFMENLGIT-DFIRIELR-APTEVTFSFDVGNGPCEVTVQSPTP---FNDNQ 608
Query: 272 WHSVLIQRLGKQVNFTVDEHRHHFH---ARGEFNLMNLDYEISFGGIPAPGKSVSFPHRN 328
WH V +R K + VD+ A G L L+ ++ GG + R
Sbjct: 609 WHHVRAERNVKGASLQVDQLPQKMQPAPADGHVRLQ-LNSQLFIGG-------TATRQRG 660
Query: 329 FHGCLENLYYNGV 341
F GC+ +L NGV
Sbjct: 661 FLGCIRSLQLNGV 673
>gi|239743729 PREDICTED: similar to contactin associated
protein-like 3B [Homo sapiens]
Length = 380
Score = 551 bits (1420), Expect = e-156
Identities = 263/357 (73%), Positives = 306/357 (85%)
Query: 1 MGSVTGAVLKTLLLLSTQNWNRVEAGNSYDCDDPLVSALPQASFSSSSELSSSHGPGFAR 60
M SV AVLK LLLL TQ W+ V AGN DCD PL SALP++SFSSSSELSSSHGPGF+R
Sbjct: 1 MASVAWAVLKVLLLLPTQTWSPVGAGNPPDCDAPLASALPRSSFSSSSELSSSHGPGFSR 60
Query: 61 LNRRDGAGGWSPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSNWVTSYLLMFSDSGWNW 120
LNRRDGAGGW+PLVSNKYQWLQIDLGERMEVTAVATQGGYGSS+WVTSYLLMFSD G NW
Sbjct: 61 LNRRDGAGGWTPLVSNKYQWLQIDLGERMEVTAVATQGGYGSSDWVTSYLLMFSDGGRNW 120
Query: 121 KQYRQEDSIWGFSGNANADSVVYYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGCAYR 180
KQYR+E+SIWGF GN NADSVV+YRLQP +ARFLRF+PL WNP+GRIGMRIEV+GCAY+
Sbjct: 121 KQYRREESIWGFPGNTNADSVVHYRLQPPFEARFLRFLPLAWNPRGRIGMRIEVYGCAYK 180
Query: 181 SEVVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREGPNGDHITLQLRRAR 240
SEVV DG+S+LLY D+K L PI+D+ISLKFK MQS+GILLHREG +G+HITL+L + +
Sbjct: 181 SEVVYFDGQSALLYTLDKKPLKPIRDVISLKFKAMQSNGILLHREGQHGNHITLELIKRK 240
Query: 241 LFLLINSGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRLGKQVNFTVDEHRHHFHARGE 300
L +NSG AKLPST V LTLGSLLDDQHWHSVLI+ L QVNFTVD+H HHF A+G+
Sbjct: 241 LVFFLNSGNAKLPSTIAPVTLTLGSLLDDQHWHSVLIELLHTQVNFTVDKHTHHFQAKGD 300
Query: 301 FNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAM 357
+ ++L++EISFGGIP PG+S +F ++FHGCLENLYYNGVD+ +LAK+ KPQI+ M
Sbjct: 301 SSNLDLNFEISFGGIPTPGRSRAFTRKSFHGCLENLYYNGVDVTELAKKHKPQILMM 357
Score = 39.3 bits (90), Expect = 0.025
Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 18/146 (12%)
Query: 817 VSFFFKTTASSGVFLENLGI-ADFIRIELRSPTVVTFSFDVGNGPFEISVQSPTH----- 870
+S FK S+G+ L G + I +EL +V F + GN ++ T
Sbjct: 208 ISLKFKAMQSNGILLHREGQHGNHITLELIKRKLVFF-LNSGNAKLPSTIAPVTLTLGSL 266
Query: 871 FNDNQWHHVRVERNMKEASLQVDQLTPKTQPAPADGHVLLQLNSQLFVGGTAT------- 923
+D WH V +E + + VD+ T Q + L LN ++ GG T
Sbjct: 267 LDDQHWHSVLIELLHTQVNFTVDKHTHHFQAKGDSSN--LDLNFEISFGGIPTPGRSRAF 324
Query: 924 RQRGFLGCIRSLQLNGMTLDLEERAQ 949
++ F GC+ +L NG +D+ E A+
Sbjct: 325 TRKSFHGCLENLYYNG--VDVTELAK 348
Score = 33.9 bits (76), Expect = 1.0
Identities = 34/139 (24%), Positives = 52/139 (37%), Gaps = 17/139 (12%)
Query: 395 TFQFRTWNKAGLLLFSE--------LQLISGGILLFLSDG--KLKSNLYQPGKLPSDITA 444
+ +F+ G+LL E L+LI ++ FL+ G KL S + P +T
Sbjct: 209 SLKFKAMQSNGILLHREGQHGNHITLELIKRKLVFFLNSGNAKLPSTI-----APVTLTL 263
Query: 445 GVELNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLLGPEQIYSGGTYYFGGCPDKSFGSK 504
G L+D WHSV + ++ VD + FGG P G
Sbjct: 264 GSLLDDQHWHSVLIELLHTQVNFTVDKHTHHFQAKGDSSNLDLNFEISFGGIPTP--GRS 321
Query: 505 CKSPLGGFQGCMRLISISG 523
F GC+ + +G
Sbjct: 322 RAFTRKSFHGCLENLYYNG 340
>gi|169184330 PREDICTED: novel protein similar to contactin associated
protein-like 3 (CNTNAP3) [Homo sapiens]
Length = 291
Score = 336 bits (861), Expect = 1e-91
Identities = 176/286 (61%), Positives = 218/286 (76%), Gaps = 4/286 (1%)
Query: 999 EISAYFGSGSSVIYNFQENYLLSKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFV 1058
+ISAYF +GSS+ Y+FQE+Y LS+NSSS +S H D+ L+REMI SFRTTRTPSLLL+V
Sbjct: 2 KISAYFATGSSMTYHFQEHYTLSENSSSLVSSLHRDVTLTREMITLSFRTTRTPSLLLYV 61
Query: 1059 SSFYKEYLSVIIAKNGSLQIRYKLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIE 1118
SSFY+EYLSVI+A NGSLQIRYKL+++Q PD FDFKNMADGQLH + INREE VV +E
Sbjct: 62 SSFYEEYLSVILANNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVE 121
Query: 1119 IDDNRRRQVHLSSGTEFSAVKSLVLGRILEHSDVDQDTALAGAQGFTGCLSAVQLSHVAP 1178
++ + ++QV LSSGTEF+AVKSL+LG++LE + D DT A GFTGCLSAV+ AP
Sbjct: 122 VNQSAKKQVILSSGTEFNAVKSLILGKVLEAAGADPDTRRAATSGFTGCLSAVRFGCAAP 181
Query: 1179 LKAALHPSHPDPVTVTGHVTE-SSCMAQPGTDATSRE---RTHSFADHSGTIDDREPLAN 1234
LKAAL PS P VTV GHV + C A + + +RE R A SG +D+ EPL N
Sbjct: 182 LKAALRPSGPSRVTVRGHVAPMARCAAGAASGSPARELAPRLAGGAGRSGPVDEGEPLVN 241
Query: 1235 AIKSDSAVIGGLIAVVIFILLCITAIAVRIYQQKRLYKRSEAKRSE 1280
A + DSAVIGG+IAV IFILLCITAIA+RIYQQ++L K +E+K S+
Sbjct: 242 ADRRDSAVIGGVIAVEIFILLCITAIAIRIYQQRKLRKENESKVSK 287
>gi|239758135 PREDICTED: similar to cell recognition molecule CASPR3
[Homo sapiens]
Length = 140
Score = 193 bits (490), Expect = 1e-48
Identities = 93/136 (68%), Positives = 116/136 (85%)
Query: 1012 YNFQENYLLSKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFVSSFYKEYLSVIIA 1071
Y+FQE+Y LS+NSSS +S H D+ L+REMI SFRTTRTPSLLL+VSSFY+EYLSVI+A
Sbjct: 3 YHFQEHYTLSENSSSLVSSLHRDVTLTREMITLSFRTTRTPSLLLYVSSFYEEYLSVILA 62
Query: 1072 KNGSLQIRYKLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIEIDDNRRRQVHLSS 1131
NGSLQIRYKL+++Q PD FDFKNMADGQLH + INREE VV +E++ + ++QV LSS
Sbjct: 63 NNGSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQSAKKQVILSS 122
Query: 1132 GTEFSAVKSLVLGRIL 1147
GTEF+AVKSL+LG++L
Sbjct: 123 GTEFNAVKSLILGKVL 138
>gi|21166380 neurexin 2 isoform alpha-2 precursor [Homo sapiens]
Length = 1642
Score = 138 bits (348), Expect = 3e-32
Identities = 119/445 (26%), Positives = 191/445 (42%), Gaps = 56/445 (12%)
Query: 183 VVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREGPNGDHITLQLRRARLF 242
V G Y + D I+L F+T+Q +G++LH G + D++ L L+ ++
Sbjct: 265 VATFKGNEFFCYDLSHNPIQSSTDEITLAFRTLQRNGLMLHT-GKSADYVNLSLKSGAVW 323
Query: 243 LLINSGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRLGKQ--------VNFTVDEHRHH 294
L+IN G + VN +D WH V + R +Q V +VD
Sbjct: 324 LVINLGSGAFEALVEPVN----GKFNDNAWHDVRVTRNLRQHAGIGHAMVTISVDGILTT 379
Query: 295 F-HARGEFNLMNLDYEISFGGIP----APGKSVSFPHRNFHGCLENLYYNGVD----IID 345
+ + ++ ++ D GG P PG VS NF GCL+++ Y D +
Sbjct: 380 TGYTQEDYTMLGSDDFFYIGGSPNTADLPGSPVS---NNFMGCLKDVVYKNNDFKLELSR 436
Query: 346 LAKQQKPQIIAMGNVSFSCSQPQSM-PVTFLSSRSYLALPDFSGEEEVSATFQFRTWNKA 404
LAK+ P++ G++SF C ++ PVTF S +++ALP +S + S + FRT
Sbjct: 437 LAKEGDPKMKLQGDLSFRCEDVAALDPVTFESPEAFVALPRWSAKRTGSISLDFRTTEPN 496
Query: 405 GLLLFSELQLISGG------------ILLFLSDGKLKSNLYQPGKLPSDITAGVELNDGQ 452
GLLLFS+ + GG + L DG L L + ++NDG+
Sbjct: 497 GLLLFSQGRRAGGGAGSHSSAQRADYFAMELLDGHLYLLLDMGSGGIKLRASSRKVNDGE 556
Query: 453 WHSVSLSAKKNHLSVAVDGQMASAAPLLGPEQIYSGGTYYFGGCPDKSFGSKCKSPL--- 509
W V S++V+ + E + Y GG P+ G + PL
Sbjct: 557 WCHVDFQRDGRKGSISVNSRSTPFLATGDSEILDLESELYLGGLPE---GGRVDLPLPPE 613
Query: 510 -------GGFQGCMRLISISGKVVDL--ISVQQGSLGNFSDLQIDSCGISDRCLPNYCEH 560
G+ GC+R + I G+ DL ++ QG++G ++ +C C +
Sbjct: 614 VWTAALRAGYVGCVRDLFIDGRSRDLRGLAEAQGAVGVAPFCSRETL---KQCASAPCRN 670
Query: 561 GGECSQSWSTFHCNCTNTGYRGATC 585
GG C + W+ F C+C TG+ G C
Sbjct: 671 GGVCREGWNRFICDCIGTGFLGRVC 695
Score = 131 bits (330), Expect = 4e-30
Identities = 112/426 (26%), Positives = 175/426 (41%), Gaps = 41/426 (9%)
Query: 177 CAYRSEVVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREG-PNGDHITLQ 235
C + V+ DG + + +D+ SL+F + ++ G+++ + D + L+
Sbjct: 695 CEREATVLSYDGSMYMKIMLPNAMHTEAEDV-SLRFMSQRAYGLMMATTSRESADTLRLE 753
Query: 236 LRRARLFLLINSGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRLGKQVNFTVDEHRHHF 295
L ++ L +N G+ P T L G L+D WH+V + R GK + +VD
Sbjct: 754 LDGGQMKLTVNLGKG--PET-----LFAGHKLNDNEWHTVRVVRRGKSLQLSVDNVTVEG 806
Query: 296 HARGEFNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENLYYNGVDIIDLAKQQKPQII 355
G M L++ GI + +S NF G L L +NG +D K
Sbjct: 807 QMAGAH--MRLEFHNIETGIMTERRFISVVPSNFIGHLSGLVFNGQPYMDQCKDGDITYC 864
Query: 356 AMGNVSFSCSQPQSMPVTFLSSRSYLALPDFSGEEEVSATFQFRTWNKAGLLLFSE---- 411
+ N F + PVTF S SYLAL + FQF+T GLLLF+
Sbjct: 865 EL-NARFGLRAIVADPVTFKSRSSYLALATLQAYASMHLFFQFKTTAPDGLLLFNSGNGN 923
Query: 412 ----LQLISGGILLFLSDGK----LKSNLYQPGKLPSDITAGVELNDGQWHSVSLSAKKN 463
++L+ G I G +K N +P +ND QWH+V +S
Sbjct: 924 DFIVIELVKGYIHYVFDLGNGPSLMKGNSDKP------------VNDNQWHNVVVSRDPG 971
Query: 464 HLSVAVDGQMASAAPLLGPEQIYSGGTYYFGGCPDKSFGS--KCKSPLGGFQGCMRLISI 521
++ G + G Y GG F + K + GFQGC+ + +
Sbjct: 972 NVHTLKIDSRTVTQHSNGARNLDLKGELYIGGLSKNMFSNLPKLVASRDGFQGCLASVDL 1031
Query: 522 SGKVVDLISVQQGSLGNFSDLQIDSCGISDRCLPNYCEHGGECSQSWSTFHCNCTNTGYR 581
+G++ DLI+ +L ++ G S C C + G C Q W F C+CT T Y
Sbjct: 1032 NGRLPDLIA---DALHRIGQVERGCDGPSTTCTEESCANQGVCLQQWDGFTCDCTMTSYG 1088
Query: 582 GATCHN 587
G C++
Sbjct: 1089 GPVCND 1094
Score = 116 bits (291), Expect = 1e-25
Identities = 99/343 (28%), Positives = 159/343 (46%), Gaps = 39/343 (11%)
Query: 796 SFDTEASYLHFPTFHGELSADVSFFFKTTASSGVFLENLGIA-DFIRIELRSPTVVTFSF 854
+F + +SYL T S + F FKTTA G+ L N G DFI IEL + + F
Sbjct: 881 TFKSRSSYLALATLQAYASMHLFFQFKTTAPDGLLLFNSGNGNDFIVIELVKG-YIHYVF 939
Query: 855 DVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEA-SLQVDQLTPKTQPAPADGHVLLQLN 913
D+GNGP + S NDNQWH+V V R+ +L++D +T ++G L L
Sbjct: 940 DLGNGPSLMKGNSDKPVNDNQWHNVVVSRDPGNVHTLKIDS---RTVTQHSNGARNLDLK 996
Query: 914 SQLFVGGTATR-----------QRGFLGCIRSLQLNGMTLDL-EERAQVTPEVQPGCRGH 961
+L++GG + + GF GC+ S+ LNG DL + +V+ GC G
Sbjct: 997 GELYIGGLSKNMFSNLPKLVASRDGFQGCLASVDLNGRLPDLIADALHRIGQVERGCDGP 1056
Query: 962 CSSYGK-LCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEISAY-FGSGSSVIYNFQENYL 1019
++ + C N G C ++ GF CDCT ++Y GP C++ + Y FG G ++I Y
Sbjct: 1057 STTCTEESCANQGVCLQQWDGFTCDCTMTSYGGPVCNDPGTTYIFGKGGALI-----TYT 1111
Query: 1020 LSKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQIR 1079
N ++ R + FS + + +S +YL + I G++ +
Sbjct: 1112 WPPND-------RPSTRMDRLAVGFSTHQRSAVLVRVDSASGLGDYLQLHI-DQGTVGVI 1163
Query: 1080 YKLNKYQEPDVVNFDFKN--MADGQLHHIMINREEGVVFIEID 1120
+ + D + D N ++DG+ H + R G +++D
Sbjct: 1164 FNVG----TDDITIDEPNAIVSDGKYHVVRFTRSGGNATLQVD 1202
Score = 103 bits (258), Expect = 8e-22
Identities = 180/819 (21%), Positives = 310/819 (37%), Gaps = 163/819 (19%)
Query: 395 TFQFRTWNKAGLLLFSELQLISGG----ILLFLSDGKLKSNLYQPGKLPSDITAGVELND 450
+F RT LLL+ L GG + L L DG+L+ P+ + + D
Sbjct: 54 SFSLRTNATRALLLY----LDDGGDCDFLELLLVDGRLRLRFTLSCAEPATLQLDTPVAD 109
Query: 451 GQWHSVSLSAKKNHLSVAVDGQMASAAPLLGPEQIYSGGTYYFGGCP-DKSFGSKCKSPL 509
+WH V L+ ++AVDG+ +A ++ + GG P D + S +
Sbjct: 110 DRWHMVLLTRDARRTALAVDGEARAAEVRSKRREMQVASDLFVGGIPPDVRLSALTLSTV 169
Query: 510 G---GFQGCMRLISISGKVVDLISVQQGSLGNFSDLQIDSCGISDRCLP--NYCEHGGEC 564
F+G + + + + L+ QG G +D C P N C +GG C
Sbjct: 170 KYEPPFRGLLANLKLGERPPALLG-SQGLRGATAD---------PLCAPARNPCANGGLC 219
Query: 565 SQ-SWSTFHCNCTNTGYRGATC-----------HNSIYEQSCEAYKHRGNTSGFYYIDSD 612
+ + C+C++TG+ G C H ++ + E + + F+ D
Sbjct: 220 TVLAPGEVGCDCSHTGFGGKFCSEEEHPMEGPAHLTLNSEGKEEFVATFKGNEFFCYDLS 279
Query: 613 GSGPLEPFLLYCNMTETAWTIIQHNGSDLTRVRNTNPENPY-------------AGFFEY 659
+ P + A+ +Q NG L ++ + N +G FE
Sbjct: 280 HN----PIQSSTDEITLAFRTLQRNGLMLHTGKSADYVNLSLKSGAVWLVINLGSGAFE- 334
Query: 660 VASMEQLQATINRAEHCEQEFTYYCKK------SRLVNKQDGTPLSWWVGRTNETQTYWG 713
A +E + N + T ++ + + DG + G T E T G
Sbjct: 335 -ALVEPVNGKFNDNAWHDVRVTRNLRQHAGIGHAMVTISVDGILTT--TGYTQEDYTMLG 391
Query: 714 -------GSSPDLQKCTCGLEGNCIDSQYYCNCDADRNEWTNDTGLLAYKEHLPVTKIVI 766
G SP+ T L G+ + S + C D ND L
Sbjct: 392 SDDFFYIGGSPN----TADLPGSPV-SNNFMGCLKDVVYKNNDFKL-------------- 432
Query: 767 TDTGRLHSEAAYKLGPLLCQGDRSF-------WNSASFDTEASYLHFPTFHGELSADVSF 819
+ RL E K+ QGD SF + +F++ +++ P + + + +S
Sbjct: 433 -ELSRLAKEGDPKMK---LQGDLSFRCEDVAALDPVTFESPEAFVALPRWSAKRTGSISL 488
Query: 820 FFKTTASSGVFLENLGI--------------ADFIRIELRSPTVVTFSFDVGNGPFEISV 865
F+TT +G+ L + G AD+ +EL + D+G+G ++
Sbjct: 489 DFRTTEPNGLLLFSQGRRAGGGAGSHSSAQRADYFAMELLDGHLYLL-LDMGSGGIKLRA 547
Query: 866 QSPTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQPAPADGHV-LLQLNSQLFVGG---- 920
S ND +W HV +R+ ++ S+ V+ ++ P A G +L L S+L++GG
Sbjct: 548 SS-RKVNDGEWCHVDFQRDGRKGSISVNS---RSTPFLATGDSEILDLESELYLGGLPEG 603
Query: 921 ------------TATRQRGFLGCIRSLQLNGMTLDLE--ERAQVTPEVQPGCRGH----C 962
TA + G++GC+R L ++G + DL AQ V P C C
Sbjct: 604 GRVDLPLPPEVWTAALRAGYVGCVRDLFIDGRSRDLRGLAEAQGAVGVAPFCSRETLKQC 663
Query: 963 SSYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQENYLLSK 1022
+S CRNGG CRE F CDC + + G C E + GS + N
Sbjct: 664 ASAP--CRNGGVCREGWNRFICDCIGTGFLGRVCEREATVLSYDGSMYMKIMLPN----- 716
Query: 1023 NSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQIRYKL 1082
M E + F + R L++ +S +E + + Q++ +
Sbjct: 717 -----------AMHTEAEDVSLRFMSQRAYGLMMATTS--RESADTLRLELDGGQMKLTV 763
Query: 1083 NKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIEIDD 1121
N + P+ + F + D + H + + R + + +D+
Sbjct: 764 NLGKGPETL-FAGHKLNDNEWHTVRVVRRGKSLQLSVDN 801
Score = 71.2 bits (173), Expect = 6e-12
Identities = 95/382 (24%), Positives = 153/382 (40%), Gaps = 74/382 (19%)
Query: 816 DVSFFFKTTASSGVFLENLG--IADFIRIELRSPTVVTFSFDVGNGPFEISVQSPTHFND 873
DVS F + + G+ + AD +R+EL + + ++G GP + ND
Sbjct: 724 DVSLRFMSQRAYGLMMATTSRESADTLRLELDGGQM-KLTVNLGKGPETLFAGHK--LND 780
Query: 874 NQWHHVRVERNMKEASLQVDQLTPKTQPAPADGHVLLQLNSQLFVGGTATRQR------- 926
N+WH VRV R K L VD +T + Q A A H+ L+ ++ G T +R
Sbjct: 781 NEWHTVRVVRRGKSLQLSVDNVTVEGQMAGA--HMRLEFHN--IETGIMTERRFISVVPS 836
Query: 927 GFLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRGHCSSYGKLCRNGGKCRERPIGFFCDC 986
F+G + L NG QP Y C++G D
Sbjct: 837 NFIGHLSGLVFNG---------------QP--------YMDQCKDG------------DI 861
Query: 987 TFSAYTGPFCSNEISAYFGSGSSVIYNFQENYLLSKNSSSHAASFHGDMKLSREMIKFSF 1046
T+ F I A V + + +YL ++A S H + F F
Sbjct: 862 TYCELNARFGLRAIVA-----DPVTFKSRSSYLALATLQAYA-SMH---------LFFQF 906
Query: 1047 RTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQIRYKLNKYQEPDVV--NFDFKNMADGQLH 1104
+TT LLLF S +++ + + K I Y + P ++ N D K + D Q H
Sbjct: 907 KTTAPDGLLLFNSGNGNDFIVIELVKG---YIHYVFDLGNGPSLMKGNSD-KPVNDNQWH 962
Query: 1105 HIMINREEGVVFIEIDDNRRRQVHLSSGTEFSAVKSLVLGRILEHSDVDQDTALAGAQGF 1164
+++++R+ G V D+R H + L +G + ++ + +A GF
Sbjct: 963 NVVVSRDPGNVHTLKIDSRTVTQHSNGARNLDLKGELYIGGLSKNMFSNLPKLVASRDGF 1022
Query: 1165 TGCLSAVQLSHVAP--LKAALH 1184
GCL++V L+ P + ALH
Sbjct: 1023 QGCLASVDLNGRLPDLIADALH 1044
Score = 51.2 bits (121), Expect = 6e-06
Identities = 63/268 (23%), Positives = 108/268 (40%), Gaps = 38/268 (14%)
Query: 814 SADVSFFFKTTASSGV--FLENLGIADFIRIELRSPTV-VTFSFDVGNGPFEISVQSPTH 870
S ++SF +T A+ + +L++ G DF+ + L + + F+ ++Q T
Sbjct: 50 SGELSFSLRTNATRALLLYLDDGGDCDFLELLLVDGRLRLRFTLSCAE---PATLQLDTP 106
Query: 871 FNDNQWHHVRVERNMKEASLQVDQLTPKTQPAPADGHVLLQLNSQLFVGG---------- 920
D++WH V + R+ + +L VD + +Q+ S LFVGG
Sbjct: 107 VADDRWHMVLLTRDARRTALAVDGEARAAEVRSKRRE--MQVASDLFVGGIPPDVRLSAL 164
Query: 921 ---TATRQRGFLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRGH-----CSSYGKLCRNG 972
T + F G + +L+L ER Q G RG C+ C NG
Sbjct: 165 TLSTVKYEPPFRGLLANLKLG-------ERPPALLGSQ-GLRGATADPLCAPARNPCANG 216
Query: 973 GKCRERPIGFF-CDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQENYLLSKNSSSHAASF 1031
G C G CDC+ + + G FCS E G + + + ++ + +
Sbjct: 217 GLCTVLAPGEVGCDCSHTGFGGKFCSEEEHPMEGPAHLTLNSEGKEEFVATFKGNEFFCY 276
Query: 1032 ---HGDMKLSREMIKFSFRTTRTPSLLL 1056
H ++ S + I +FRT + L+L
Sbjct: 277 DLSHNPIQSSTDEITLAFRTLQRNGLML 304
Score = 43.1 bits (100), Expect = 0.002
Identities = 35/159 (22%), Positives = 65/159 (40%), Gaps = 18/159 (11%)
Query: 206 DIISLKFKTMQSDGILLHREGPNG--DHITLQLRRARLFLLINSGEAKLPSTSTLVNLTL 263
D +++ F T Q +L+ + +G D++ L + + + ++ N G T +
Sbjct: 1123 DRLAVGFSTHQRSAVLVRVDSASGLGDYLQLHIDQGTVGVIFNVG------TDDITIDEP 1176
Query: 264 GSLLDDQHWHSVLIQRLGKQVNFTVDEH--RHHFHARGEFNLMNLDYEISFGGIPAPGKS 321
+++ D +H V R G VD + A + + N I GG
Sbjct: 1177 NAIVSDGKYHVVRFTRSGGNATLQVDSWPVNERYPAGRQLTIFNSQAAIKIGGRDQG--- 1233
Query: 322 VSFPHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNV 360
R F G + LYYNG+ ++ LA + P + G++
Sbjct: 1234 -----RPFQGQVSGLYYNGLKVLALAAESDPNVRTEGHL 1267
Score = 38.9 bits (89), Expect = 0.033
Identities = 95/436 (21%), Positives = 160/436 (36%), Gaps = 101/436 (23%)
Query: 162 WNPKGRIGMRIEVFGCAYRSEVVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGIL 221
W P + + + A R++ ++ G R+ + + + +S +T + +L
Sbjct: 7 WRPTPPPLLLLLLLALAARADGLEFGGGPGQWARYARWAGAASSGELSFSLRTNATRALL 66
Query: 222 LHRE-GPNGDHITLQLRRARLFLLINSGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRL 280
L+ + G + D + L L RL L A+ P+T L L + + D WH VL+ R
Sbjct: 67 LYLDDGGDCDFLELLLVDGRLRLRFTLSCAE-PAT-----LQLDTPVADDRWHMVLLTRD 120
Query: 281 GKQVNFTVDEHRHHFHARGEFNLMNLDYEISFGGIP------APGKSVSFPHRNFHGCLE 334
++ VD R + M + ++ GGIP A S F G L
Sbjct: 121 ARRTALAVDGEARAAEVRSKRREMQVASDLFVGGIPPDVRLSALTLSTVKYEPPFRGLLA 180
Query: 335 NLY-------------YNGVDIIDL-AKQQKP-------QIIAMGNVSFSCSQPQ----- 368
NL G L A + P ++A G V CS
Sbjct: 181 NLKLGERPPALLGSQGLRGATADPLCAPARNPCANGGLCTVLAPGEVGCDCSHTGFGGKF 240
Query: 369 -SMPVTFLSSRSYLALPDFSGEEEVSATFQ------------------------FRTWNK 403
S + ++L L + G+EE ATF+ FRT +
Sbjct: 241 CSEEEHPMEGPAHLTL-NSEGKEEFVATFKGNEFFCYDLSHNPIQSSTDEITLAFRTLQR 299
Query: 404 AGLLL-------FSELQLISGGILLFLSDGKLKSNLYQPGKLPSDITAGVELNDGQWHSV 456
GL+L + L L SG + L ++ L S ++ P + ND WH V
Sbjct: 300 NGLMLHTGKSADYVNLSLKSGAVWLVIN---LGSGAFEALVEP----VNGKFNDNAWHDV 352
Query: 457 SLSAK-KNH-------LSVAVDGQMASAA------PLLGPEQIYSGGTYYFGGCPDKSFG 502
++ + H ++++VDG + + +LG + +Y GG P+ +
Sbjct: 353 RVTRNLRQHAGIGHAMVTISVDGILTTTGYTQEDYTMLGSDDF-----FYIGGSPNTA-- 405
Query: 503 SKCKSPL-GGFQGCMR 517
SP+ F GC++
Sbjct: 406 DLPGSPVSNNFMGCLK 421
>gi|14211536 neurexin 2 isoform alpha-1 precursor [Homo sapiens]
Length = 1712
Score = 137 bits (346), Expect = 5e-32
Identities = 117/452 (25%), Positives = 191/452 (42%), Gaps = 63/452 (13%)
Query: 183 VVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREGPNGDHITLQLRRARLF 242
V G Y + D I+L F+T+Q +G++LH G + D++ L L+ ++
Sbjct: 289 VATFKGNEFFCYDLSHNPIQSSTDEITLAFRTLQRNGLMLHT-GKSADYVNLSLKSGAVW 347
Query: 243 LLINSGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRLGKQ---VNFTVDEHRHHF---- 295
L+IN G + VN +D WH V + R +Q + + H+
Sbjct: 348 LVINLGSGAFEALVEPVN----GKFNDNAWHDVRVTRNLRQHAGIGHAMVNKLHYLVTIS 403
Query: 296 ---------HARGEFNLMNLDYEISFGGIP----APGKSVSFPHRNFHGCLENLYYNGVD 342
+ + ++ ++ D GG P PG VS NF GCL+++ Y D
Sbjct: 404 VDGILTTTGYTQEDYTMLGSDDFFYIGGSPNTADLPGSPVS---NNFMGCLKDVVYKNND 460
Query: 343 ----IIDLAKQQKPQIIAMGNVSFSCSQPQSM-PVTFLSSRSYLALPDFSGEEEVSATFQ 397
+ LAK+ P++ G++SF C ++ PVTF S +++ALP +S + S +
Sbjct: 461 FKLELSRLAKEGDPKMKLQGDLSFRCEDVAALDPVTFESPEAFVALPRWSAKRTGSISLD 520
Query: 398 FRTWNKAGLLLFSELQLISGG------------ILLFLSDGKLKSNLYQPGKLPSDITAG 445
FRT GLLLFS+ + GG + L DG L L +
Sbjct: 521 FRTTEPNGLLLFSQGRRAGGGAGSHSSAQRADYFAMELLDGHLYLLLDMGSGGIKLRASS 580
Query: 446 VELNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLLGPEQIYSGGTYYFGGCPDKSFGSKC 505
++NDG+W V S++V+ + E + Y GG P+ G +
Sbjct: 581 RKVNDGEWCHVDFQRDGRKGSISVNSRSTPFLATGDSEILDLESELYLGGLPE---GGRV 637
Query: 506 KSPL----------GGFQGCMRLISISGKVVDL--ISVQQGSLGNFSDLQIDSCGISDRC 553
PL G+ GC+R + I G+ DL ++ QG++G ++ +C
Sbjct: 638 DLPLPPEVWTAALRAGYVGCVRDLFIDGRSRDLRGLAEAQGAVGVAPFCSRETL---KQC 694
Query: 554 LPNYCEHGGECSQSWSTFHCNCTNTGYRGATC 585
C +GG C + W+ F C+C TG+ G C
Sbjct: 695 ASAPCRNGGVCREGWNRFICDCIGTGFLGRVC 726
Score = 127 bits (320), Expect = 5e-29
Identities = 112/433 (25%), Positives = 175/433 (40%), Gaps = 46/433 (10%)
Query: 177 CAYRSEVVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREG-PNGDHITLQ 235
C + V+ DG + + +D+ SL+F + ++ G+++ + D + L+
Sbjct: 726 CEREATVLSYDGSMYMKIMLPNAMHTEAEDV-SLRFMSQRAYGLMMATTSRESADTLRLE 784
Query: 236 LRRARLFLLIN-------SGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRLGKQVNFTV 288
L ++ L +N +K P T L G L+D WH+V + R GK + +V
Sbjct: 785 LDGGQMKLTVNLDCLRVGCAPSKGPET-----LFAGHKLNDNEWHTVRVVRRGKSLQLSV 839
Query: 289 DEHRHHFHARGEFNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENLYYNGVDIIDLAK 348
D G M L++ GI + +S NF G L L +NG +D K
Sbjct: 840 DNVTVEGQMAGAH--MRLEFHNIETGIMTERRFISVVPSNFIGHLSGLVFNGQPYMDQCK 897
Query: 349 QQKPQIIAMGNVSFSCSQPQSMPVTFLSSRSYLALPDFSGEEEVSATFQFRTWNKAGLLL 408
+ N F + PVTF S SYLAL + FQF+T GLLL
Sbjct: 898 DGDITYCEL-NARFGLRAIVADPVTFKSRSSYLALATLQAYASMHLFFQFKTTAPDGLLL 956
Query: 409 FSE--------LQLISGGILLFLSDGK----LKSNLYQPGKLPSDITAGVELNDGQWHSV 456
F+ ++L+ G I G +K N +P +ND QWH+V
Sbjct: 957 FNSGNGNDFIVIELVKGYIHYVFDLGNGPSLMKGNSDKP------------VNDNQWHNV 1004
Query: 457 SLSAKKNHLSVAVDGQMASAAPLLGPEQIYSGGTYYFGGCPDKSFGS--KCKSPLGGFQG 514
+S ++ G + G Y GG F + K + GFQG
Sbjct: 1005 VVSRDPGNVHTLKIDSRTVTQHSNGARNLDLKGELYIGGLSKNMFSNLPKLVASRDGFQG 1064
Query: 515 CMRLISISGKVVDLISVQQGSLGNFSDLQIDSCGISDRCLPNYCEHGGECSQSWSTFHCN 574
C+ + ++G++ DLI+ +L ++ G S C C + G C Q W F C+
Sbjct: 1065 CLASVDLNGRLPDLIA---DALHRIGQVERGCDGPSTTCTEESCANQGVCLQQWDGFTCD 1121
Query: 575 CTNTGYRGATCHN 587
CT T Y G C++
Sbjct: 1122 CTMTSYGGPVCND 1134
Score = 116 bits (291), Expect = 1e-25
Identities = 99/343 (28%), Positives = 159/343 (46%), Gaps = 39/343 (11%)
Query: 796 SFDTEASYLHFPTFHGELSADVSFFFKTTASSGVFLENLGIA-DFIRIELRSPTVVTFSF 854
+F + +SYL T S + F FKTTA G+ L N G DFI IEL + + F
Sbjct: 921 TFKSRSSYLALATLQAYASMHLFFQFKTTAPDGLLLFNSGNGNDFIVIELVKG-YIHYVF 979
Query: 855 DVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEA-SLQVDQLTPKTQPAPADGHVLLQLN 913
D+GNGP + S NDNQWH+V V R+ +L++D +T ++G L L
Sbjct: 980 DLGNGPSLMKGNSDKPVNDNQWHNVVVSRDPGNVHTLKIDS---RTVTQHSNGARNLDLK 1036
Query: 914 SQLFVGGTATR-----------QRGFLGCIRSLQLNGMTLDL-EERAQVTPEVQPGCRGH 961
+L++GG + + GF GC+ S+ LNG DL + +V+ GC G
Sbjct: 1037 GELYIGGLSKNMFSNLPKLVASRDGFQGCLASVDLNGRLPDLIADALHRIGQVERGCDGP 1096
Query: 962 CSSYGK-LCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEISAY-FGSGSSVIYNFQENYL 1019
++ + C N G C ++ GF CDCT ++Y GP C++ + Y FG G ++I Y
Sbjct: 1097 STTCTEESCANQGVCLQQWDGFTCDCTMTSYGGPVCNDPGTTYIFGKGGALI-----TYT 1151
Query: 1020 LSKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQIR 1079
N ++ R + FS + + +S +YL + I G++ +
Sbjct: 1152 WPPND-------RPSTRMDRLAVGFSTHQRSAVLVRVDSASGLGDYLQLHI-DQGTVGVI 1203
Query: 1080 YKLNKYQEPDVVNFDFKN--MADGQLHHIMINREEGVVFIEID 1120
+ + D + D N ++DG+ H + R G +++D
Sbjct: 1204 FNVG----TDDITIDEPNAIVSDGKYHVVRFTRSGGNATLQVD 1242
Score = 86.3 bits (212), Expect = 2e-16
Identities = 73/267 (27%), Positives = 119/267 (44%), Gaps = 51/267 (19%)
Query: 786 QGDRSF-------WNSASFDTEASYLHFPTFHGELSADVSFFFKTTASSGVFLENLGI-- 836
QGD SF + +F++ +++ P + + + +S F+TT +G+ L + G
Sbjct: 479 QGDLSFRCEDVAALDPVTFESPEAFVALPRWSAKRTGSISLDFRTTEPNGLLLFSQGRRA 538
Query: 837 ------------ADFIRIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQWHHVRVERN 884
AD+ +EL + D+G+G ++ S ND +W HV +R+
Sbjct: 539 GGGAGSHSSAQRADYFAMELLDGHLYLL-LDMGSGGIKLRASS-RKVNDGEWCHVDFQRD 596
Query: 885 MKEASLQVDQLTPKTQPAPADGHV-LLQLNSQLFVGG----------------TATRQRG 927
++ S+ V+ ++ P A G +L L S+L++GG TA + G
Sbjct: 597 GRKGSISVNS---RSTPFLATGDSEILDLESELYLGGLPEGGRVDLPLPPEVWTAALRAG 653
Query: 928 FLGCIRSLQLNGMTLDLE--ERAQVTPEVQPGCRGH----CSSYGKLCRNGGKCRERPIG 981
++GC+R L ++G + DL AQ V P C C+S CRNGG CRE
Sbjct: 654 YVGCVRDLFIDGRSRDLRGLAEAQGAVGVAPFCSRETLKQCASAP--CRNGGVCREGWNR 711
Query: 982 FFCDCTFSAYTGPFCSNEISAYFGSGS 1008
F CDC + + G C E + GS
Sbjct: 712 FICDCIGTGFLGRVCEREATVLSYDGS 738
Score = 67.8 bits (164), Expect = 7e-11
Identities = 97/388 (25%), Positives = 157/388 (40%), Gaps = 77/388 (19%)
Query: 816 DVSFFFKTTASSGVFLENLG--IADFIRIELRSPTV-VTFSFD---VGNGPFE--ISVQS 867
DVS F + + G+ + AD +R+EL + +T + D VG P + ++ +
Sbjct: 755 DVSLRFMSQRAYGLMMATTSRESADTLRLELDGGQMKLTVNLDCLRVGCAPSKGPETLFA 814
Query: 868 PTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQPAPADGHVLLQLNSQLFVGGTATRQR- 926
NDN+WH VRV R K L VD +T + Q A A H+ L+ ++ G T +R
Sbjct: 815 GHKLNDNEWHTVRVVRRGKSLQLSVDNVTVEGQMAGA--HMRLEFHN--IETGIMTERRF 870
Query: 927 ------GFLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRGHCSSYGKLCRNGGKCRERPI 980
F+G + L NG QP Y C++G
Sbjct: 871 ISVVPSNFIGHLSGLVFNG---------------QP--------YMDQCKDG-------- 899
Query: 981 GFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQENYLLSKNSSSHAASFHGDMKLSRE 1040
D T+ F I A V + + +YL ++A S H
Sbjct: 900 ----DITYCELNARFGLRAIVA-----DPVTFKSRSSYLALATLQAYA-SMH-------- 941
Query: 1041 MIKFSFRTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQIRYKLNKYQEPDVV--NFDFKNM 1098
+ F F+TT LLLF S +++ + + K I Y + P ++ N D K +
Sbjct: 942 -LFFQFKTTAPDGLLLFNSGNGNDFIVIELVKG---YIHYVFDLGNGPSLMKGNSD-KPV 996
Query: 1099 ADGQLHHIMINREEGVVFIEIDDNRRRQVHLSSGTEFSAVKSLVLGRILEHSDVDQDTAL 1158
D Q H+++++R+ G V D+R H + L +G + ++ + +
Sbjct: 997 NDNQWHNVVVSRDPGNVHTLKIDSRTVTQHSNGARNLDLKGELYIGGLSKNMFSNLPKLV 1056
Query: 1159 AGAQGFTGCLSAVQLSHVAP--LKAALH 1184
A GF GCL++V L+ P + ALH
Sbjct: 1057 ASRDGFQGCLASVDLNGRLPDLIADALH 1084
Score = 50.8 bits (120), Expect = 8e-06
Identities = 37/154 (24%), Positives = 67/154 (43%), Gaps = 26/154 (16%)
Query: 816 DVSFFFKTTASSGVFLENLGIADFIRIELRSPTVVTFSFDVGNGPFEISVQSPT-HFNDN 874
+++ F+T +G+ L AD++ + L+S V ++G+G FE V+ FNDN
Sbjct: 313 EITLAFRTLQRNGLMLHTGKSADYVNLSLKSGAV-WLVINLGSGAFEALVEPVNGKFNDN 371
Query: 875 QWHHVRVERNMKE---------------ASLQVDQLTPKTQPAPADGHVLLQLNSQLFVG 919
WH VRV RN+++ ++ VD + T D + +L + ++G
Sbjct: 372 AWHDVRVTRNLRQHAGIGHAMVNKLHYLVTISVDGILTTTGYTQED-YTMLGSDDFFYIG 430
Query: 920 GTATR--------QRGFLGCIRSLQLNGMTLDLE 945
G+ F+GC++ + LE
Sbjct: 431 GSPNTADLPGSPVSNNFMGCLKDVVYKNNDFKLE 464
Score = 48.1 bits (113), Expect = 5e-05
Identities = 54/208 (25%), Positives = 86/208 (41%), Gaps = 35/208 (16%)
Query: 814 SADVSFFFKTTASSGV--FLENLGIADFIRIELRSPTV-VTFSFDVGNGPFEISVQSPTH 870
S ++SF +T A+ + +L++ G DF+ + L + + F+ ++Q T
Sbjct: 50 SGELSFSLRTNATRALLLYLDDGGDCDFLELLLVDGRLRLRFTLSCAE---PATLQLDTP 106
Query: 871 FNDNQWHHVRVERNMKEASLQVDQLTPKTQPAPADGHVLLQLNSQLFVGG---------- 920
D++WH V + R+ + +L VD + +Q+ S LFVGG
Sbjct: 107 VADDRWHMVLLTRDARRTALAVDGEARAAEVRSKRRE--MQVASDLFVGGIPPDVRLSAL 164
Query: 921 ---TATRQRGFLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRGH-----CSSYGKLCRNG 972
T + F G + +L+L ER Q G RG C+ C NG
Sbjct: 165 TLSTVKYEPPFRGLLANLKLG-------ERPPALLGSQ-GLRGATADPLCAPARNPCANG 216
Query: 973 GKCRERPIGFF-CDCTFSAYTGPFCSNE 999
G C G CDC+ + + G FCS E
Sbjct: 217 GLCTVLAPGEVGCDCSHTGFGGKFCSEE 244
Score = 48.1 bits (113), Expect = 5e-05
Identities = 54/232 (23%), Positives = 91/232 (39%), Gaps = 25/232 (10%)
Query: 395 TFQFRTWNKAGLLLFSELQLISGG----ILLFLSDGKLKSNLYQPGKLPSDITAGVELND 450
+F RT LLL+ L GG + L L DG+L+ P+ + + D
Sbjct: 54 SFSLRTNATRALLLY----LDDGGDCDFLELLLVDGRLRLRFTLSCAEPATLQLDTPVAD 109
Query: 451 GQWHSVSLSAKKNHLSVAVDGQMASAAPLLGPEQIYSGGTYYFGGC-PDKSFGSKCKSPL 509
+WH V L+ ++AVDG+ +A ++ + GG PD + S +
Sbjct: 110 DRWHMVLLTRDARRTALAVDGEARAAEVRSKRREMQVASDLFVGGIPPDVRLSALTLSTV 169
Query: 510 ---GGFQGCMRLISISGKVVDLISVQQGSLGNFSDLQIDSCGISDRCLP--NYCEHGGEC 564
F+G + + + + L+ QG G +D C P N C +GG C
Sbjct: 170 KYEPPFRGLLANLKLGERPPALLG-SQGLRGATAD---------PLCAPARNPCANGGLC 219
Query: 565 S-QSWSTFHCNCTNTGYRGATCHNSIYEQSCEAYKHRGNTSGFYYIDSDGSG 615
+ + C+C++TG+ G C + A+ + G G+G
Sbjct: 220 TVLAPGEVGCDCSHTGFGGKFCSEEEHPMEGPAHLTLNSEVGSLLFSEGGAG 271
Score = 36.6 bits (83), Expect = 0.16
Identities = 36/156 (23%), Positives = 66/156 (42%), Gaps = 7/156 (4%)
Query: 162 WNPKGRIGMRIEVFGCAYRSEVVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGIL 221
W P + + + A R++ ++ G R+ + + + +S +T + +L
Sbjct: 7 WRPTPPPLLLLLLLALAARADGLEFGGGPGQWARYARWAGAASSGELSFSLRTNATRALL 66
Query: 222 LHRE-GPNGDHITLQLRRARLFLLINSGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRL 280
L+ + G + D + L L RL L A+ P+T L L + + D WH VL+ R
Sbjct: 67 LYLDDGGDCDFLELLLVDGRLRLRFTLSCAE-PAT-----LQLDTPVADDRWHMVLLTRD 120
Query: 281 GKQVNFTVDEHRHHFHARGEFNLMNLDYEISFGGIP 316
++ VD R + M + ++ GGIP
Sbjct: 121 ARRTALAVDGEARAAEVRSKRREMQVASDLFVGGIP 156
>gi|14149613 neurexin 1 isoform alpha1 precursor [Homo sapiens]
Length = 1477
Score = 134 bits (338), Expect = 4e-31
Identities = 115/454 (25%), Positives = 196/454 (43%), Gaps = 75/454 (16%)
Query: 183 VVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREGPNGDHITLQLRRARLF 242
+ G Y Q + D I+L FKT+Q +G++LH G + D++ L L+ +
Sbjct: 283 IATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHT-GKSADYVNLALKNGAVS 341
Query: 243 LLINSGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRLGKQ--------VNFTVDEHRHH 294
L+IN G + VN +D WH V + R +Q V +VD
Sbjct: 342 LVINLGSGAFEALVEPVN----GKFNDNAWHDVKVTRNLRQHSGIGHAMVTISVDGILTT 397
Query: 295 F-HARGEFNLMNLDYEISFGGIPA----PGKSVSFPHRNFHGCLENLYYNGVDI----ID 345
+ + ++ ++ D GG P+ PG VS NF GCL+ + Y D+
Sbjct: 398 TGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVS---NNFMGCLKEVVYKNNDVRLELSR 454
Query: 346 LAKQQKPQIIAMGNVSFSCSQPQSM-PVTFLSSRSYLALPDFSGEEEVSATFQFRTWNKA 404
LAKQ P++ G V+F C ++ P+TF + S+++LP ++ ++ S +F FRT
Sbjct: 455 LAKQGDPKMKIHGVVAFKCENVATLDPITFETPESFISLPKWNAKKTGSISFDFRTTEPN 514
Query: 405 GLLLFSE---------------------LQLISGGILLFLSDG----KLKSNLYQPGKLP 439
GL+LFS ++++ G + L L G K+K+ L +
Sbjct: 515 GLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALLKK----- 569
Query: 440 SDITAGVELNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLLGPEQIYSGGTYYFGGCPDK 499
+NDG+W+ V +++V+ E + Y GG P+
Sbjct: 570 --------VNDGEWYHVDFQRDGRSGTISVNTLRTPYTAPGESEILDLDDELYLGGLPEN 621
Query: 500 SFGSKCKSPLG------GFQGCMRLISISGKVVDLISVQQGSLGNFSDLQIDSCG--ISD 551
G + + G+ GC+R + I G+ D+ Q + + + ++ SC +
Sbjct: 622 KAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIR--QMAEVQSTAGVK-PSCSKETAK 678
Query: 552 RCLPNYCEHGGECSQSWSTFHCNCTNTGYRGATC 585
CL N C++ G C W+ + C+C+ TGY G +C
Sbjct: 679 PCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSC 712
Score = 131 bits (330), Expect = 4e-30
Identities = 125/463 (26%), Positives = 206/463 (44%), Gaps = 61/463 (13%)
Query: 177 CAYRSEVVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREG-PNGDHITLQ 235
C + V+ DG + + + +D+ SL+F++ ++ GIL+ + D + L+
Sbjct: 712 CEREATVLSYDGSMFMKIQLPVVMHTEAEDV-SLRFRSQRAYGILMATTSRDSADTLRLE 770
Query: 236 LRRARLFLLINSGEAKLPSTSTLVNLTL--GSLLDDQHWHSVLIQRLGKQVNFTVDEHRH 293
L R+ L +N ++ S+ TL G L+D WH+V + R GK + TVD+ +
Sbjct: 771 LDAGRVKLTVNLDCIRINCNSSKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQA 830
Query: 294 HF------HARGEFNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENLYYNGVDIIDLA 347
H R EF+ + GI + +S NF G L++L +NG+ IDL
Sbjct: 831 MTGQMAGDHTRLEFHNIET-------GIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLC 883
Query: 348 KQQKPQIIAMGNVSFSCSQPQSMPVTFLSSRSYLALPDFSGEEEVSATFQFRTWNKAGLL 407
K + N F + PVTF + SY+AL + FQF+T + GL+
Sbjct: 884 KNGDIDYCEL-NARFGFRNIIADPVTFKTKSSYVALATLQAYTSMHLFFQFKTTSLDGLI 942
Query: 408 LFSE--------LQLISGGILLFLSDGKLKSNLYQPGKLPSDITAGVELNDGQWHSVSLS 459
L++ ++L+ G L ++ D +NL + ++ LND QWH+V +S
Sbjct: 943 LYNSGDGNDFIVVELVKG-YLHYVFDLGNGANLIKG-------SSNKPLNDNQWHNVMIS 994
Query: 460 AKKNHL-SVAVDGQMASAAPLLGPEQIYSGGTYYFGGCPDKSFGS--KCKSPLGGFQGCM 516
++L +V +D ++ + G + Y GG +++ S K GFQGC+
Sbjct: 995 RDTSNLHTVKIDTKITTQITA-GARNLDLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCL 1053
Query: 517 RLISISGKVVDLISVQQGSLGNFSDLQID-SC-GISDRCLPNYCEHGGECSQSWSTFHCN 574
+ ++G++ DLIS F + QI+ C G S C + C + G C Q W F C+
Sbjct: 1054 ASVDLNGRLPDLISDAL-----FCNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCD 1108
Query: 575 CTNTGYRGATCHNSIYEQSCEAYKHRGNTSGFYYIDSDGSGPL 617
C+ T + G C N G YI S G G +
Sbjct: 1109 CSMTSFSGPLC----------------NDPGTTYIFSKGGGQI 1135
Score = 114 bits (286), Expect = 5e-25
Identities = 95/343 (27%), Positives = 155/343 (45%), Gaps = 39/343 (11%)
Query: 796 SFDTEASYLHFPTFHGELSADVSFFFKTTASSGVFLENLGIA-DFIRIELRSPTVVTFSF 854
+F T++SY+ T S + F FKTT+ G+ L N G DFI +EL + + F
Sbjct: 908 TFKTKSSYVALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKG-YLHYVF 966
Query: 855 DVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQPAPADGHVLLQLNS 914
D+GNG I S NDNQWH+V + R+ ++L ++ K G L L S
Sbjct: 967 DLGNGANLIKGSSNKPLNDNQWHNVMISRDT--SNLHTVKIDTKITTQITAGARNLDLKS 1024
Query: 915 QLFVGGTATR-----------QRGFLGCIRSLQLNGMTLDLEERAQV-TPEVQPGCRGHC 962
L++GG A + GF GC+ S+ LNG DL A +++ GC G
Sbjct: 1025 DLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEGPS 1084
Query: 963 SSYGK-LCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEISAYFGS--GSSVIYNFQENYL 1019
++ + C N G C ++ GF CDC+ ++++GP C++ + Y S G + Y + N
Sbjct: 1085 TTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYKWPPNDR 1144
Query: 1020 LSKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFV--SSFYKEYLSVIIAKNGSLQ 1077
S + + + F T + ++L+ V SS +YL + I + +
Sbjct: 1145 PSTRA---------------DRLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQG---K 1186
Query: 1078 IRYKLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIEID 1120
I K N + + + DG+ H + R G +++D
Sbjct: 1187 IGVKFNVGTDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVD 1229
Score = 97.4 bits (241), Expect = 8e-20
Identities = 90/394 (22%), Positives = 165/394 (41%), Gaps = 69/394 (17%)
Query: 771 RLHSEAAYKLGPLLCQGDRSFWNSASFDTEASYLHFPTFHGELSADVSFFFKTTASSGVF 830
++H A+K C+ + + +F+T S++ P ++ + + +SF F+TT +G+
Sbjct: 464 KIHGVVAFK-----CENVATL-DPITFETPESFISLPKWNAKKTGSISFDFRTTEPNGLI 517
Query: 831 LENLGI--------------ADFIRIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQW 876
L + G DF IE+ + D+G+G +I ND +W
Sbjct: 518 LFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLL-LDMGSGTIKIKALLKK-VNDGEW 575
Query: 877 HHVRVERNMKEASLQVDQL-TPKTQPAPADGHVLLQLNSQLFVGG--------------- 920
+HV +R+ + ++ V+ L TP T P ++ +L L+ +L++GG
Sbjct: 576 YHVDFQRDGRSGTISVNTLRTPYTAPGESE---ILDLDDELYLGGLPENKAGLVFPTEVW 632
Query: 921 TATRQRGFLGCIRSLQLNGMTLDLEERAQV--TPEVQPGCRGHCSS--YGKLCRNGGKCR 976
TA G++GCIR L ++G + D+ + A+V T V+P C + C+N G CR
Sbjct: 633 TALLNYGYVGCIRDLFIDGQSKDIRQMAEVQSTAGVKPSCSKETAKPCLSNPCKNNGMCR 692
Query: 977 ERPIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQENYLLSKNSSSHAASFHGDMK 1036
+ + CDC+ + Y G C E + GS + M
Sbjct: 693 DGWNRYVCDCSGTGYLGRSCEREATVLSYDGSMFM----------------KIQLPVVMH 736
Query: 1037 LSREMIKFSFRTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQ-------IRYKLNKYQEPD 1089
E + FR+ R +L+ +S + G ++ IR N + P+
Sbjct: 737 TEAEDVSLRFRSQRAYGILMATTSRDSADTLRLELDAGRVKLTVNLDCIRINCNSSKGPE 796
Query: 1090 VVNFDFKNMADGQLHHIMINREEGVVFIEIDDNR 1123
+ F N+ D + H + + R + + +DD +
Sbjct: 797 TL-FAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQ 829
Score = 72.8 bits (177), Expect = 2e-12
Identities = 78/346 (22%), Positives = 141/346 (40%), Gaps = 43/346 (12%)
Query: 800 EASYLHFPTFHGELSADVSFFFKTTASSGVFL--ENLGIADFIRIELRSPTVVTFSFDVG 857
E + FP ++ +++SF KT ++ G+ L ++ G DF+ + L + SF +
Sbjct: 37 EGQWTRFPKWNACCESEMSFQLKTRSARGLVLYFDDEGFCDFLELILTRGGRLQLSFSIF 96
Query: 858 NGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQPAPADGHVLLQLNSQLF 917
++ + T ND WH VR+ R + +L +DQ+ K + + + S LF
Sbjct: 97 CAE-PATLLADTPVNDGAWHSVRIRRQFRNTTLFIDQVEAKWVEVKSKRRD-MTVFSGLF 154
Query: 918 VGG--------------TATRQR-GFLGCIRSLQLNGMTLDLEERAQVTPEVQP------ 956
VGG + R+R F G IR +++N + + +V + +P
Sbjct: 155 VGGLPPELRAAALKLTLASVREREPFKGWIRDVRVNSSQVLPVDSGEVKLDDEPPNSGGG 214
Query: 957 -GCRGHCSSYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQ 1015
C G +C NGG C CDC+ + + G CS E + G + +
Sbjct: 215 SPCEAGEEGEGGVCLNGGVCSVVDDQAVCDCSRTGFRGKDCSQEDNNVEG----LAHLMM 270
Query: 1016 ENYLLSKNSSSHAASFHGD-----------MKLSREMIKFSFRTTRTPSLLLFVSSFYKE 1064
+ SK + A+F G ++ S + I SF+T + L+L +
Sbjct: 271 GDQGKSKGKEEYIATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHTGK-SAD 329
Query: 1065 YLSVIIAKNGSLQIRYKLNKYQEPDVVNFDFKNMADGQLHHIMINR 1110
Y+++ + KNG++ + L +V D H + + R
Sbjct: 330 YVNLAL-KNGAVSLVINLGSGAFEALVEPVNGKFNDNAWHDVKVTR 374
Score = 62.0 bits (149), Expect = 4e-09
Identities = 91/382 (23%), Positives = 152/382 (39%), Gaps = 78/382 (20%)
Query: 816 DVSFFFKTTASSGVFLENLG--IADFIRIELRSPTV--------VTFSFDVGNGPFEISV 865
DVS F++ + G+ + AD +R+EL + V + + + GP +
Sbjct: 741 DVSLRFRSQRAYGILMATTSRDSADTLRLELDAGRVKLTVNLDCIRINCNSSKGPETLF- 799
Query: 866 QSPTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQPAPADGHVLLQLNSQLFVGGTATRQ 925
+ + NDN+WH VRV R K L VD T D H L+ ++ G T +
Sbjct: 800 -AGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGD-HTRLEFHN--IETGIITER 855
Query: 926 R-------GFLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRGHCSSYGKLCRNGGKCRER 978
R F+G ++SL NGM +Y LC+NG
Sbjct: 856 RYLSSVPSNFIGHLQSLTFNGM-----------------------AYIDLCKNGDI---- 888
Query: 979 PIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQENYLLSKNSSSHAASFHGDMKLS 1038
+C E++A FG N + + K SS+ A S
Sbjct: 889 ---------------DYC--ELNARFG-----FRNIIADPVTFKTKSSYVALATLQAYTS 926
Query: 1039 REMIKFSFRTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQIRYKLNKYQEPDVVNFDFKNM 1098
+ F F+TT L+L+ S +++ V + K G L + L + K +
Sbjct: 927 MHLF-FQFKTTSLDGLILYNSGDGNDFIVVELVK-GYLHYVFDLGNGANL-IKGSSNKPL 983
Query: 1099 ADGQLHHIMINRE-EGVVFIEIDDNRRRQVHLSSGTEFSAVKS-LVLGRILEHSDVDQDT 1156
D Q H++MI+R+ + ++ID Q+ ++G +KS L +G + + +
Sbjct: 984 NDNQWHNVMISRDTSNLHTVKIDTKITTQI--TAGARNLDLKSDLYIGGVAKETYKSLPK 1041
Query: 1157 ALAGAQGFTGCLSAVQLSHVAP 1178
+ +GF GCL++V L+ P
Sbjct: 1042 LVHAKEGFQGCLASVDLNGRLP 1063
Score = 55.5 bits (132), Expect = 3e-07
Identities = 41/155 (26%), Positives = 76/155 (49%), Gaps = 21/155 (13%)
Query: 814 SADVSFFFKTTASSGVFLENLGIADFIRIELRSPTVVTFSFDVGNGPFEISVQSPT-HFN 872
S +++ FKT +G+ L AD++ + L++ V + ++G+G FE V+ FN
Sbjct: 305 SDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAV-SLVINLGSGAFEALVEPVNGKFN 363
Query: 873 DNQWHHVRVERNMKEAS--------LQVDQLTPKTQPAPADGHVLLQLNSQLFVGGTATR 924
DN WH V+V RN+++ S + VD + T D + +L + +VGG+ +
Sbjct: 364 DNAWHDVKVTRNLRQHSGIGHAMVTISVDGILTTTGYTQED-YTMLGSDDFFYVGGSPST 422
Query: 925 --------QRGFLGCIRSL--QLNGMTLDLEERAQ 949
F+GC++ + + N + L+L A+
Sbjct: 423 ADLPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAK 457
Score = 53.1 bits (126), Expect = 2e-06
Identities = 41/169 (24%), Positives = 73/169 (43%), Gaps = 18/169 (10%)
Query: 206 DIISLKFKTMQSDGILLHREGPNG--DHITLQLRRARLFLLINSGEAKLPSTSTLVNLTL 263
D +++ F T+Q + +L+ + +G D++ L + + ++ + N G T +
Sbjct: 1150 DRLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGKIGVKFNVG------TDDIAIEES 1203
Query: 264 GSLLDDQHWHSVLIQRLGKQVNFTVDEHR--HHFHARGEFNLMNLDYEISFGGIPAPGKS 321
++++D +H V R G VD + A + + N I GG K
Sbjct: 1204 NAIINDGKYHVVRFTRSGGNATLQVDSWPVIERYPAGRQLTIFNSQATIIIGG-----KE 1258
Query: 322 VSFPHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNVSFSCSQPQSM 370
P F G L LYYNG+ ++++A + I +GNV P SM
Sbjct: 1259 QGQP---FQGQLSGLYYNGLKVLNMAAENDANIAIVGNVRLVGEVPSSM 1304
Score = 52.0 bits (123), Expect = 4e-06
Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 20/210 (9%)
Query: 391 EVSATFQFRTWNKAGLLLFSELQLISGGILLFLS-DGKLKSNLYQPGKLPSDITAGVELN 449
E +FQ +T + GL+L+ + + + L L+ G+L+ + P+ + A +N
Sbjct: 51 ESEMSFQLKTRSARGLVLYFDDEGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPVN 110
Query: 450 DGQWHSVSLSAKKNHLSVAVDGQMASAAPLLGPEQ---IYSGGTYYFGGCPDKSFGSKCK 506
DG WHSV + + + ++ +D A + + ++SG + GG P + + K
Sbjct: 111 DGAWHSVRIRRQFRNTTLFIDQVEAKWVEVKSKRRDMTVFSG--LFVGGLPPELRAAALK 168
Query: 507 SPLGG------FQGCMRLISISGKVVDLISVQQGSLGNFSDLQIDS-----CGISDRCLP 555
L F+G +R + ++ V + V G + D +S C +
Sbjct: 169 LTLASVREREPFKGWIRDVRVNSSQV--LPVDSGEV-KLDDEPPNSGGGSPCEAGEEGEG 225
Query: 556 NYCEHGGECSQSWSTFHCNCTNTGYRGATC 585
C +GG CS C+C+ TG+RG C
Sbjct: 226 GVCLNGGVCSVVDDQAVCDCSRTGFRGKDC 255
>gi|208609951 neurexin 1 isoform alpha2 precursor [Homo sapiens]
Length = 1547
Score = 132 bits (332), Expect = 2e-30
Identities = 114/461 (24%), Positives = 196/461 (42%), Gaps = 82/461 (17%)
Query: 183 VVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREGPNGDHITLQLRRARLF 242
+ G Y Q + D I+L FKT+Q +G++LH G + D++ L L+ +
Sbjct: 316 IATFKGSEYFCYDLSQNPIQSSSDEITLSFKTLQRNGLMLHT-GKSADYVNLALKNGAVS 374
Query: 243 LLINSGEAKLPSTSTLVNLTLGSLLDDQHWHSV---------------LIQRLGKQVNFT 287
L+IN G + VN +D WH V ++ +L V +
Sbjct: 375 LVINLGSGAFEALVEPVN----GKFNDNAWHDVKVTRNLRQHSGIGHAMVNKLHCSVTIS 430
Query: 288 VDEHRHHF-HARGEFNLMNLDYEISFGGIPA----PGKSVSFPHRNFHGCLENLYYNGVD 342
VD + + ++ ++ D GG P+ PG VS NF GCL+ + Y D
Sbjct: 431 VDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVS---NNFMGCLKEVVYKNND 487
Query: 343 I----IDLAKQQKPQIIAMGNVSFSCSQPQSM-PVTFLSSRSYLALPDFSGEEEVSATFQ 397
+ LAKQ P++ G V+F C ++ P+TF + S+++LP ++ ++ S +F
Sbjct: 488 VRLELSRLAKQGDPKMKIHGVVAFKCENVATLDPITFETPESFISLPKWNAKKTGSISFD 547
Query: 398 FRTWNKAGLLLFSE---------------------LQLISGGILLFLSDG----KLKSNL 432
FRT GL+LFS ++++ G + L L G K+K+ L
Sbjct: 548 FRTTEPNGLILFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLLLDMGSGTIKIKALL 607
Query: 433 YQPGKLPSDITAGVELNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLLGPEQIYSGGTYY 492
+ +NDG+W+ V +++V+ E + Y
Sbjct: 608 KK-------------VNDGEWYHVDFQRDGRSGTISVNTLRTPYTAPGESEILDLDDELY 654
Query: 493 FGGCPDKSFGSKCKSPLG------GFQGCMRLISISGKVVDLISVQQGSLGNFSDLQIDS 546
GG P+ G + + G+ GC+R + I G+ D+ Q + + + ++ S
Sbjct: 655 LGGLPENKAGLVFPTEVWTALLNYGYVGCIRDLFIDGQSKDIR--QMAEVQSTAGVK-PS 711
Query: 547 CG--ISDRCLPNYCEHGGECSQSWSTFHCNCTNTGYRGATC 585
C + CL N C++ G C W+ + C+C+ TGY G +C
Sbjct: 712 CSKETAKPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSC 752
Score = 131 bits (330), Expect = 4e-30
Identities = 125/463 (26%), Positives = 206/463 (44%), Gaps = 61/463 (13%)
Query: 177 CAYRSEVVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREG-PNGDHITLQ 235
C + V+ DG + + + +D+ SL+F++ ++ GIL+ + D + L+
Sbjct: 752 CEREATVLSYDGSMFMKIQLPVVMHTEAEDV-SLRFRSQRAYGILMATTSRDSADTLRLE 810
Query: 236 LRRARLFLLINSGEAKLPSTSTLVNLTL--GSLLDDQHWHSVLIQRLGKQVNFTVDEHRH 293
L R+ L +N ++ S+ TL G L+D WH+V + R GK + TVD+ +
Sbjct: 811 LDAGRVKLTVNLDCIRINCNSSKGPETLFAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQA 870
Query: 294 HF------HARGEFNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENLYYNGVDIIDLA 347
H R EF+ + GI + +S NF G L++L +NG+ IDL
Sbjct: 871 MTGQMAGDHTRLEFHNIET-------GIITERRYLSSVPSNFIGHLQSLTFNGMAYIDLC 923
Query: 348 KQQKPQIIAMGNVSFSCSQPQSMPVTFLSSRSYLALPDFSGEEEVSATFQFRTWNKAGLL 407
K + N F + PVTF + SY+AL + FQF+T + GL+
Sbjct: 924 KNGDIDYCEL-NARFGFRNIIADPVTFKTKSSYVALATLQAYTSMHLFFQFKTTSLDGLI 982
Query: 408 LFSE--------LQLISGGILLFLSDGKLKSNLYQPGKLPSDITAGVELNDGQWHSVSLS 459
L++ ++L+ G L ++ D +NL + ++ LND QWH+V +S
Sbjct: 983 LYNSGDGNDFIVVELVKG-YLHYVFDLGNGANLIKG-------SSNKPLNDNQWHNVMIS 1034
Query: 460 AKKNHL-SVAVDGQMASAAPLLGPEQIYSGGTYYFGGCPDKSFGS--KCKSPLGGFQGCM 516
++L +V +D ++ + G + Y GG +++ S K GFQGC+
Sbjct: 1035 RDTSNLHTVKIDTKITTQITA-GARNLDLKSDLYIGGVAKETYKSLPKLVHAKEGFQGCL 1093
Query: 517 RLISISGKVVDLISVQQGSLGNFSDLQID-SC-GISDRCLPNYCEHGGECSQSWSTFHCN 574
+ ++G++ DLIS F + QI+ C G S C + C + G C Q W F C+
Sbjct: 1094 ASVDLNGRLPDLISDAL-----FCNGQIERGCEGPSTTCQEDSCSNQGVCLQQWDGFSCD 1148
Query: 575 CTNTGYRGATCHNSIYEQSCEAYKHRGNTSGFYYIDSDGSGPL 617
C+ T + G C N G YI S G G +
Sbjct: 1149 CSMTSFSGPLC----------------NDPGTTYIFSKGGGQI 1175
Score = 114 bits (286), Expect = 5e-25
Identities = 95/343 (27%), Positives = 155/343 (45%), Gaps = 39/343 (11%)
Query: 796 SFDTEASYLHFPTFHGELSADVSFFFKTTASSGVFLENLGIA-DFIRIELRSPTVVTFSF 854
+F T++SY+ T S + F FKTT+ G+ L N G DFI +EL + + F
Sbjct: 948 TFKTKSSYVALATLQAYTSMHLFFQFKTTSLDGLILYNSGDGNDFIVVELVKG-YLHYVF 1006
Query: 855 DVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQPAPADGHVLLQLNS 914
D+GNG I S NDNQWH+V + R+ ++L ++ K G L L S
Sbjct: 1007 DLGNGANLIKGSSNKPLNDNQWHNVMISRDT--SNLHTVKIDTKITTQITAGARNLDLKS 1064
Query: 915 QLFVGGTATR-----------QRGFLGCIRSLQLNGMTLDLEERAQV-TPEVQPGCRGHC 962
L++GG A + GF GC+ S+ LNG DL A +++ GC G
Sbjct: 1065 DLYIGGVAKETYKSLPKLVHAKEGFQGCLASVDLNGRLPDLISDALFCNGQIERGCEGPS 1124
Query: 963 SSYGK-LCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEISAYFGS--GSSVIYNFQENYL 1019
++ + C N G C ++ GF CDC+ ++++GP C++ + Y S G + Y + N
Sbjct: 1125 TTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDPGTTYIFSKGGGQITYKWPPNDR 1184
Query: 1020 LSKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFV--SSFYKEYLSVIIAKNGSLQ 1077
S + + + F T + ++L+ V SS +YL + I + +
Sbjct: 1185 PSTRA---------------DRLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQG---K 1226
Query: 1078 IRYKLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIEID 1120
I K N + + + DG+ H + R G +++D
Sbjct: 1227 IGVKFNVGTDDIAIEESNAIINDGKYHVVRFTRSGGNATLQVD 1269
Score = 97.4 bits (241), Expect = 8e-20
Identities = 90/394 (22%), Positives = 165/394 (41%), Gaps = 69/394 (17%)
Query: 771 RLHSEAAYKLGPLLCQGDRSFWNSASFDTEASYLHFPTFHGELSADVSFFFKTTASSGVF 830
++H A+K C+ + + +F+T S++ P ++ + + +SF F+TT +G+
Sbjct: 504 KIHGVVAFK-----CENVATL-DPITFETPESFISLPKWNAKKTGSISFDFRTTEPNGLI 557
Query: 831 LENLGI--------------ADFIRIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQW 876
L + G DF IE+ + D+G+G +I ND +W
Sbjct: 558 LFSHGKPRHQKDAKHPQMIKVDFFAIEMLDGHLYLL-LDMGSGTIKIKALLKK-VNDGEW 615
Query: 877 HHVRVERNMKEASLQVDQL-TPKTQPAPADGHVLLQLNSQLFVGG--------------- 920
+HV +R+ + ++ V+ L TP T P ++ +L L+ +L++GG
Sbjct: 616 YHVDFQRDGRSGTISVNTLRTPYTAPGESE---ILDLDDELYLGGLPENKAGLVFPTEVW 672
Query: 921 TATRQRGFLGCIRSLQLNGMTLDLEERAQV--TPEVQPGCRGHCSS--YGKLCRNGGKCR 976
TA G++GCIR L ++G + D+ + A+V T V+P C + C+N G CR
Sbjct: 673 TALLNYGYVGCIRDLFIDGQSKDIRQMAEVQSTAGVKPSCSKETAKPCLSNPCKNNGMCR 732
Query: 977 ERPIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQENYLLSKNSSSHAASFHGDMK 1036
+ + CDC+ + Y G C E + GS + M
Sbjct: 733 DGWNRYVCDCSGTGYLGRSCEREATVLSYDGSMFM----------------KIQLPVVMH 776
Query: 1037 LSREMIKFSFRTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQ-------IRYKLNKYQEPD 1089
E + FR+ R +L+ +S + G ++ IR N + P+
Sbjct: 777 TEAEDVSLRFRSQRAYGILMATTSRDSADTLRLELDAGRVKLTVNLDCIRINCNSSKGPE 836
Query: 1090 VVNFDFKNMADGQLHHIMINREEGVVFIEIDDNR 1123
+ F N+ D + H + + R + + +DD +
Sbjct: 837 TL-FAGYNLNDNEWHTVRVVRRGKSLKLTVDDQQ 869
Score = 68.6 bits (166), Expect = 4e-11
Identities = 56/225 (24%), Positives = 93/225 (41%), Gaps = 26/225 (11%)
Query: 800 EASYLHFPTFHGELSADVSFFFKTTASSGVFL--ENLGIADFIRIELRSPTVVTFSFDVG 857
E + FP ++ +++SF KT ++ G+ L ++ G DF+ + L + SF +
Sbjct: 37 EGQWTRFPKWNACCESEMSFQLKTRSARGLVLYFDDEGFCDFLELILTRGGRLQLSFSIF 96
Query: 858 NGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQPAPADGHVLLQLNSQLF 917
++ + T ND WH VR+ R + +L +DQ+ K + + S LF
Sbjct: 97 CAE-PATLLADTPVNDGAWHSVRIRRQFRNTTLFIDQVEAKWVEVKSKRRDMTVF-SGLF 154
Query: 918 VGGTATRQRG---------------FLGCIRSLQLNGMTLDLEERAQVTPEVQPG----- 957
VGG R F G IR +++N + + +V + +P
Sbjct: 155 VGGLPPELRAAALKLTLASVREREPFKGWIRDVRVNSSQVLPVDSGEVKLDDEPPNSGGG 214
Query: 958 --CRGHCSSYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEI 1000
C G +C NGG C CDC+ + + G CS EI
Sbjct: 215 SPCEAGEEGEGGVCLNGGVCSVVDDQAVCDCSRTGFRGKDCSQEI 259
Score = 62.0 bits (149), Expect = 4e-09
Identities = 91/382 (23%), Positives = 152/382 (39%), Gaps = 78/382 (20%)
Query: 816 DVSFFFKTTASSGVFLENLG--IADFIRIELRSPTV--------VTFSFDVGNGPFEISV 865
DVS F++ + G+ + AD +R+EL + V + + + GP +
Sbjct: 781 DVSLRFRSQRAYGILMATTSRDSADTLRLELDAGRVKLTVNLDCIRINCNSSKGPETLF- 839
Query: 866 QSPTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQPAPADGHVLLQLNSQLFVGGTATRQ 925
+ + NDN+WH VRV R K L VD T D H L+ ++ G T +
Sbjct: 840 -AGYNLNDNEWHTVRVVRRGKSLKLTVDDQQAMTGQMAGD-HTRLEFHN--IETGIITER 895
Query: 926 R-------GFLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRGHCSSYGKLCRNGGKCRER 978
R F+G ++SL NGM +Y LC+NG
Sbjct: 896 RYLSSVPSNFIGHLQSLTFNGM-----------------------AYIDLCKNGDI---- 928
Query: 979 PIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQENYLLSKNSSSHAASFHGDMKLS 1038
+C E++A FG N + + K SS+ A S
Sbjct: 929 ---------------DYC--ELNARFG-----FRNIIADPVTFKTKSSYVALATLQAYTS 966
Query: 1039 REMIKFSFRTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQIRYKLNKYQEPDVVNFDFKNM 1098
+ F F+TT L+L+ S +++ V + K G L + L + K +
Sbjct: 967 MHLF-FQFKTTSLDGLILYNSGDGNDFIVVELVK-GYLHYVFDLGNGANL-IKGSSNKPL 1023
Query: 1099 ADGQLHHIMINRE-EGVVFIEIDDNRRRQVHLSSGTEFSAVKS-LVLGRILEHSDVDQDT 1156
D Q H++MI+R+ + ++ID Q+ ++G +KS L +G + + +
Sbjct: 1024 NDNQWHNVMISRDTSNLHTVKIDTKITTQI--TAGARNLDLKSDLYIGGVAKETYKSLPK 1081
Query: 1157 ALAGAQGFTGCLSAVQLSHVAP 1178
+ +GF GCL++V L+ P
Sbjct: 1082 LVHAKEGFQGCLASVDLNGRLP 1103
Score = 53.1 bits (126), Expect = 2e-06
Identities = 51/214 (23%), Positives = 92/214 (42%), Gaps = 20/214 (9%)
Query: 391 EVSATFQFRTWNKAGLLLFSELQLISGGILLFLS-DGKLKSNLYQPGKLPSDITAGVELN 449
E +FQ +T + GL+L+ + + + L L+ G+L+ + P+ + A +N
Sbjct: 51 ESEMSFQLKTRSARGLVLYFDDEGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTPVN 110
Query: 450 DGQWHSVSLSAKKNHLSVAVDGQMASAAPLLGPEQ---IYSGGTYYFGGCPDKSFGSKCK 506
DG WHSV + + + ++ +D A + + ++SG + GG P + + K
Sbjct: 111 DGAWHSVRIRRQFRNTTLFIDQVEAKWVEVKSKRRDMTVFSG--LFVGGLPPELRAAALK 168
Query: 507 SPLGG------FQGCMRLISISGKVVDLISVQQGSLGNFSDLQIDS-----CGISDRCLP 555
L F+G +R + ++ V + V G + D +S C +
Sbjct: 169 LTLASVREREPFKGWIRDVRVNSSQV--LPVDSGEV-KLDDEPPNSGGGSPCEAGEEGEG 225
Query: 556 NYCEHGGECSQSWSTFHCNCTNTGYRGATCHNSI 589
C +GG CS C+C+ TG+RG C I
Sbjct: 226 GVCLNGGVCSVVDDQAVCDCSRTGFRGKDCSQEI 259
Score = 52.8 bits (125), Expect = 2e-06
Identities = 41/162 (25%), Positives = 76/162 (46%), Gaps = 28/162 (17%)
Query: 814 SADVSFFFKTTASSGVFLENLGIADFIRIELRSPTVVTFSFDVGNGPFEISVQSPT-HFN 872
S +++ FKT +G+ L AD++ + L++ V + ++G+G FE V+ FN
Sbjct: 338 SDEITLSFKTLQRNGLMLHTGKSADYVNLALKNGAV-SLVINLGSGAFEALVEPVNGKFN 396
Query: 873 DNQWHHVRVERNMKEAS---------------LQVDQLTPKTQPAPADGHVLLQLNSQLF 917
DN WH V+V RN+++ S + VD + T D + +L + +
Sbjct: 397 DNAWHDVKVTRNLRQHSGIGHAMVNKLHCSVTISVDGILTTTGYTQED-YTMLGSDDFFY 455
Query: 918 VGGTATR--------QRGFLGCIRSL--QLNGMTLDLEERAQ 949
VGG+ + F+GC++ + + N + L+L A+
Sbjct: 456 VGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDVRLELSRLAK 497
Score = 40.8 bits (94), Expect = 0.009
Identities = 41/194 (21%), Positives = 75/194 (38%), Gaps = 38/194 (19%)
Query: 206 DIISLKFKTMQSDGILLHREGPNG--DHITLQLRRARLFLLINSGEAKLPSTSTLVNLTL 263
D +++ F T+Q + +L+ + +G D++ L + + ++ + N G T +
Sbjct: 1190 DRLAIGFSTVQKEAVLVRVDSSSGLGDYLELHIHQGKIGVKFNVG------TDDIAIEES 1243
Query: 264 GSLLDDQHWHSVLIQRLGKQVNFTVDEHR--------HHFHARGEFNLMNLDYEI----- 310
++++D +H V R G VD ++ + R + Y +
Sbjct: 1244 NAIINDGKYHVVRFTRSGGNATLQVDSWPVIERYPAGNNDNERLAIARQRIPYRLGRVVD 1303
Query: 311 --------------SFGGIPAPGKSVSFPHRNFHGCLENLYYNGVDIIDLAKQQKPQIIA 356
S I GK P F G L LYYNG+ ++++A + I
Sbjct: 1304 EWLLDKGRQLTIFNSQATIIIGGKEQGQP---FQGQLSGLYYNGLKVLNMAAENDANIAI 1360
Query: 357 MGNVSFSCSQPQSM 370
+GNV P SM
Sbjct: 1361 VGNVRLVGEVPSSM 1374
>gi|21070969 neurexin 3 isoform 1 precursor [Homo sapiens]
Length = 1061
Score = 125 bits (315), Expect = 2e-28
Identities = 108/429 (25%), Positives = 188/429 (43%), Gaps = 38/429 (8%)
Query: 177 CAYRSEVVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREG-PNGDHITLQ 235
C + ++ DG + + +D+ S +F + ++ G+L+ + D + L+
Sbjct: 306 CEREASILSYDGSMYMKIIMPMVMHTEAEDV-SFRFMSQRAYGLLVATTSRDSADTLRLE 364
Query: 236 LRRARLFLLINSGEAKLPSTSTLVNLTL--GSLLDDQHWHSVLIQRLGKQVNFTVDEHRH 293
L R+ L++N ++ S+ TL G L+D WH+V + R GK + TVD+
Sbjct: 365 LDGGRVKLMVNLDCIRINCNSSKGPETLYAGQKLNDNEWHTVRVVRRGKSLKLTVDDDVA 424
Query: 294 HFHARGEFNLMNLDYEISFGGIPAPGKSVSFPHRNFHGCLENLYYNGVDIIDLAKQQKPQ 353
G+ L++ GI + +S +F G L++L +NG+ IDL K
Sbjct: 425 EGTMVGDHT--RLEFHNIETGIMTEKRYISVVPSSFIGHLQSLMFNGLLYIDLCKNGDID 482
Query: 354 IIAMGNVSFSCSQPQSMPVTFLSSRSYLALPDFSGEEEVSATFQFRTWNKAGLLLFSE-- 411
+ F + PVTF + SYL+L + FQF+T + G +LF+
Sbjct: 483 YCEL-KARFGLRNIIADPVTFKTKSSYLSLATLQAYTSMHLFFQFKTTSPDGFILFNSGD 541
Query: 412 ------LQLISGGILLFLSDGK----LKSNLYQPGKLPSDITAGVELNDGQWHSVSLSA- 460
++L+ G I G +K N +P LND QWH+V ++
Sbjct: 542 GNDFIAVELVKGYIHYVFDLGNGPNVIKGNSDRP------------LNDNQWHNVVITRD 589
Query: 461 KKNHLSVAVDGQMASAAPLLGPEQIYSGGTYYFGGCPDKSFGS--KCKSPLGGFQGCMRL 518
N S+ VD ++ + + G + + G Y G + + K + GFQGC+
Sbjct: 590 NSNTHSLKVDTKVVTQV-INGAKNLDLKGDLYMAGLAQGMYSNLPKLVASRDGFQGCLAS 648
Query: 519 ISISGKVVDLISVQQGSLGNFSDLQIDSCGISDRCLPNYCEHGGECSQSWSTFHCNCTNT 578
+ ++G++ DLI+ +L ++ G S C + C + G C Q W F C+C+ T
Sbjct: 649 VDLNGRLPDLIN---DALHRSGQIERGCEGPSTTCQEDSCANQGVCMQQWEGFTCDCSMT 705
Query: 579 GYRGATCHN 587
Y G C++
Sbjct: 706 SYSGNQCND 714
Score = 119 bits (299), Expect = 1e-26
Identities = 142/577 (24%), Positives = 233/577 (40%), Gaps = 92/577 (15%)
Query: 796 SFDTEASYLHFPTFHGELSADVSFFFKTTASSGVFLENLGIA-DFIRIELRSPTVVTFSF 854
+F T++SYL T S + F FKTT+ G L N G DFI +EL + + F
Sbjct: 501 TFKTKSSYLSLATLQAYTSMHLFFQFKTTSPDGFILFNSGDGNDFIAVELVKG-YIHYVF 559
Query: 855 DVGNGPFEISVQSPTHFNDNQWHHVRVER-NMKEASLQVDQLTPKTQPAPADGHVLLQLN 913
D+GNGP I S NDNQWH+V + R N SL+VD K +G L L
Sbjct: 560 DLGNGPNVIKGNSDRPLNDNQWHNVVITRDNSNTHSLKVD---TKVVTQVINGAKNLDLK 616
Query: 914 SQLFVGGTA-----------TRQRGFLGCIRSLQLNGMTLDL-EERAQVTPEVQPGCRGH 961
L++ G A + GF GC+ S+ LNG DL + + +++ GC G
Sbjct: 617 GDLYMAGLAQGMYSNLPKLVASRDGFQGCLASVDLNGRLPDLINDALHRSGQIERGCEGP 676
Query: 962 CSSYGK-LCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEISAY-FG-SGSSVIYNFQENY 1018
++ + C N G C ++ GF CDC+ ++Y+G C++ + Y FG SG ++Y + N
Sbjct: 677 STTCQEDSCANQGVCMQQWEGFTCDCSMTSYSGNQCNDPGATYIFGKSGGLILYTWPAND 736
Query: 1019 LLSKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQI 1078
S S A F +K R P L F+ ++ ++ G++ I
Sbjct: 737 RPSTRSDRLAVGFSTTVKDG-----ILVRIDSAPGLGDFLQLHIEQGKIGVVFNIGTVDI 791
Query: 1079 RYKLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIEIDD----------------N 1122
K +E VN DG+ H + R G +++D+ N
Sbjct: 792 SIK----EERTPVN-------DGKYHVVRFTRNGGNATLQVDNWPVNEHYPTGRQLTIFN 840
Query: 1123 RRRQVHLS------------SGTEFSAVKSLVLGRILEHS---DVDQDTALAGAQGFTGC 1167
+ Q+ + SG + +K VL E++ ++ L G
Sbjct: 841 TQAQIAIGGKDKGRLFQGQLSGLYYDGLK--VLNMAAENNPNIKINGSVRLVGE--VPSI 896
Query: 1168 LSAVQLSHVAP-LKAALHPSHPDPVTVTGHVTESSCMAQPGTD--ATSRERTHSFAD--- 1221
L Q + + P + + + T T S+ QP +D +S E + D
Sbjct: 897 LGTTQTTSMPPEMSTTVMETTTTMATTTTRKNRSTASIQPTSDDLVSSAECSSDDEDFVE 956
Query: 1222 -HSGTIDDREP-------LANAIKSDSAVIGGLIAVVIFILLCITAIAVRIYQQKR---- 1269
T + EP + I+ S+ G ++ +V LCI + +Y+ +
Sbjct: 957 CEPSTANPTEPGIRRVPGASEVIRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEG 1016
Query: 1270 LYKRSEAKR--SENVDSAEAVLKSELNIQNAVNENQK 1304
Y+ E + S + S ++K + + ++ QK
Sbjct: 1017 SYQVDETRNYISNSAQSNGTLMKEKQQSSKSGHKKQK 1053
Score = 93.6 bits (231), Expect = 1e-18
Identities = 78/310 (25%), Positives = 131/310 (42%), Gaps = 51/310 (16%)
Query: 313 GGIPA----PGKSVSFPHRNFHGCLENLYYNGVDI----IDLAKQQKPQIIAMGNVSFSC 364
GG P+ PG VS NF GCL+ + Y DI LA+ ++ G V F C
Sbjct: 11 GGSPSTADLPGSPVS---NNFMGCLKEVVYKNNDIRLELSRLARIADTKMKIYGEVVFKC 67
Query: 365 SQPQSM-PVTFLSSRSYLALPDFSGEEEVSATFQFRTWNKAGLLLFSE------------ 411
++ P+ F + +Y++LP ++ + S +F FRT GL+LF+
Sbjct: 68 ENVATLDPINFETPEAYISLPKWNTKRMGSISFDFRTTEPNGLILFTHGKPQERKDARSQ 127
Query: 412 ---------LQLISGGILLFLSDGKLKSNLYQPGKLPSDITAGVELNDGQWHSVSLSAKK 462
++L+ G + L L G + K + NDG+W+ V +
Sbjct: 128 KNTKVDFFAVELLDGNLYLLLDMGSGTIKVKATQK---------KANDGEWYHVDIQRDG 178
Query: 463 NHLSVAVDGQMASAAPLLGPEQIYSGGTYYFGGCPDKSFGSKCKSPLG------GFQGCM 516
+++V+ + E + G Y GG P+ G + L G+ GC+
Sbjct: 179 RSGTISVNSRRTPFTASGESEILDLEGDMYLGGLPENRAGLILPTELWTAMLNYGYVGCI 238
Query: 517 RLISISGKVVDLISVQQGSLGNFSDLQIDSCGISDRCLPNY-CEHGGECSQSWSTFHCNC 575
R + I G+ ++ Q + N + ++ +S + +Y C++ C W+ F C+C
Sbjct: 239 RDLFIDGRSKNIR--QLAEMQNAAGVKSSCSRMSAKQCDSYPCKNNAVCKDGWNRFICDC 296
Query: 576 TNTGYRGATC 585
T TGY G TC
Sbjct: 297 TGTGYWGRTC 306
Score = 85.1 bits (209), Expect = 4e-16
Identities = 63/249 (25%), Positives = 112/249 (44%), Gaps = 43/249 (17%)
Query: 796 SFDTEASYLHFPTFHGELSADVSFFFKTTASSGVFLENLGI--------------ADFIR 841
+F+T +Y+ P ++ + +SF F+TT +G+ L G DF
Sbjct: 77 NFETPEAYISLPKWNTKRMGSISFDFRTTEPNGLILFTHGKPQERKDARSQKNTKVDFFA 136
Query: 842 IELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQVD-QLTPKTQ 900
+EL + D+G+G ++ + ND +W+HV ++R+ + ++ V+ + TP T
Sbjct: 137 VELLDGNLYLL-LDMGSGTIKVKA-TQKKANDGEWYHVDIQRDGRSGTISVNSRRTPFTA 194
Query: 901 PAPADGHVLLQLNSQLFVGG---------------TATRQRGFLGCIRSLQLNGMTLDLE 945
++ +L L +++GG TA G++GCIR L ++G + ++
Sbjct: 195 SGESE---ILDLEGDMYLGGLPENRAGLILPTELWTAMLNYGYVGCIRDLFIDGRSKNIR 251
Query: 946 ERAQV--TPEVQPGCRG----HCSSYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNE 999
+ A++ V+ C C SY C+N C++ F CDCT + Y G C E
Sbjct: 252 QLAEMQNAAGVKSSCSRMSAKQCDSYP--CKNNAVCKDGWNRFICDCTGTGYWGRTCERE 309
Query: 1000 ISAYFGSGS 1008
S GS
Sbjct: 310 ASILSYDGS 318
Score = 66.6 bits (161), Expect = 1e-10
Identities = 77/336 (22%), Positives = 132/336 (39%), Gaps = 78/336 (23%)
Query: 208 ISLKFKTMQSDGILLHREGP-------------NGDHITLQLRRARLFLLIN--SGEAKL 252
IS F+T + +G++L G D ++L L+LL++ SG K+
Sbjct: 98 ISFDFRTTEPNGLILFTHGKPQERKDARSQKNTKVDFFAVELLDGNLYLLLDMGSGTIKV 157
Query: 253 PSTSTLVNLTLGSLLDDQHWHSVLIQRLGKQVNFTVDEHRHHFHARGEFNLMNLDYEISF 312
+T N D W+ V IQR G+ +V+ R F A GE +++L+ ++
Sbjct: 158 KATQKKAN--------DGEWYHVDIQRDGRSGTISVNSRRTPFTASGESEILDLEGDMYL 209
Query: 313 GGIPAPGKSVSFP--------HRNFHGCLENLYYNG--VDIIDLAKQQKPQIIAMGNVSF 362
GG+P + P + + GC+ +L+ +G +I LA+ Q +
Sbjct: 210 GGLPENRAGLILPTELWTAMLNYGYVGCIRDLFIDGRSKNIRQLAEMQNAAGVKSSCSRM 269
Query: 363 SCSQPQSMPV-----------TFL-----------------SSRSY-------LALPDFS 387
S Q S P F+ S SY + +P
Sbjct: 270 SAKQCDSYPCKNNAVCKDGWNRFICDCTGTGYWGRTCEREASILSYDGSMYMKIIMPMVM 329
Query: 388 GEEEVSATFQFRTWNKAGLLLFS---------ELQLISGGILLFLSDGKLKSNLYQPGKL 438
E +F+F + GLL+ + L+L G + L ++ ++ N K
Sbjct: 330 HTEAEDVSFRFMSQRAYGLLVATTSRDSADTLRLELDGGRVKLMVNLDCIRINC-NSSKG 388
Query: 439 PSDITAGVELNDGQWHSVSLSAKKNHLSVAVDGQMA 474
P + AG +LND +WH+V + + L + VD +A
Sbjct: 389 PETLYAGQKLNDNEWHTVRVVRRGKSLKLTVDDDVA 424
Score = 57.0 bits (136), Expect = 1e-07
Identities = 90/393 (22%), Positives = 151/393 (38%), Gaps = 83/393 (21%)
Query: 816 DVSFFFKTTASSGVFLENLG--IADFIRIELRSPTV--------VTFSFDVGNGPFEISV 865
DVSF F + + G+ + AD +R+EL V + + + GP ++
Sbjct: 335 DVSFRFMSQRAYGLLVATTSRDSADTLRLELDGGRVKLMVNLDCIRINCNSSKGPE--TL 392
Query: 866 QSPTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQPAPADGHVLLQLNSQLFVGGTATRQ 925
+ NDN+WH VRV R K L VD + H L+ ++ G T +
Sbjct: 393 YAGQKLNDNEWHTVRVVRRGKSLKLTVDD--DVAEGTMVGDHTRLEFHN--IETGIMTEK 448
Query: 926 R-------GFLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRGHCSSYGKLCRNGGKCRER 978
R F+G ++SL NG+ Y LC+NG
Sbjct: 449 RYISVVPSSFIGHLQSLMFNGLL-----------------------YIDLCKNGDI---- 481
Query: 979 PIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVIYNFQENYLLSKNSSSHAASFHGDMKLS 1038
+C E+ A FG + N + + K SS+ + S
Sbjct: 482 ---------------DYC--ELKARFG-----LRNIIADPVTFKTKSSYLSLATLQAYTS 519
Query: 1039 REMIKFSFRTTRTPSLLLFVSSFYKEYLSVIIAKNGSLQIRYKLNKYQEPDVV--NFDFK 1096
+ F F+TT +LF S ++++V + K I Y + P+V+ N D +
Sbjct: 520 MHLF-FQFKTTSPDGFILFNSGDGNDFIAVELVKG---YIHYVFDLGNGPNVIKGNSD-R 574
Query: 1097 NMADGQLHHIMINREEGVVF-IEIDDNRRRQVHLSSGTEFSAVKSLVLGRILEHSDVDQD 1155
+ D Q H+++I R+ +++D QV ++ L + + + +
Sbjct: 575 PLNDNQWHNVVITRDNSNTHSLKVDTKVVTQV-INGAKNLDLKGDLYMAGLAQGMYSNLP 633
Query: 1156 TALAGAQGFTGCLSAVQLSHVAP--LKAALHPS 1186
+A GF GCL++V L+ P + ALH S
Sbjct: 634 KLVASRDGFQGCLASVDLNGRLPDLINDALHRS 666
Score = 50.4 bits (119), Expect = 1e-05
Identities = 43/178 (24%), Positives = 73/178 (41%), Gaps = 22/178 (12%)
Query: 206 DIISLKFKTMQSDGILLHREGPNG--DHITLQLRRARLFLLINSG--EAKLPSTSTLVNL 261
D +++ F T DGIL+ + G D + L + + ++ ++ N G + + T VN
Sbjct: 743 DRLAVGFSTTVKDGILVRIDSAPGLGDFLQLHIEQGKIGVVFNIGTVDISIKEERTPVN- 801
Query: 262 TLGSLLDDQHWHSVLIQRLGKQVNFTVDEH--RHHFHARGEFNLMNLDYEISFGGIPAPG 319
D +H V R G VD H+ + + N +I+ GG
Sbjct: 802 -------DGKYHVVRFTRNGGNATLQVDNWPVNEHYPTGRQLTIFNTQAQIAIGG----- 849
Query: 320 KSVSFPHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNVSFSCSQPQSMPVTFLSS 377
R F G L LYY+G+ ++++A + P I G+V P + T +S
Sbjct: 850 ---KDKGRLFQGQLSGLYYDGLKVLNMAAENNPNIKINGSVRLVGEVPSILGTTQTTS 904
>gi|239752499 PREDICTED: similar to cell recognition molecule Caspr2,
partial [Homo sapiens]
Length = 140
Score = 107 bits (268), Expect = 6e-23
Identities = 49/74 (66%), Positives = 63/74 (85%)
Query: 1074 GSLQIRYKLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIEIDDNRRRQVHLSSGT 1133
GSLQIRYKL+++Q PD FDFKNMADGQLH + INREE VV +E++ + ++QV LSSGT
Sbjct: 2 GSLQIRYKLDRHQNPDAFTFDFKNMADGQLHQVKINREEAVVMVEVNQSAKKQVILSSGT 61
Query: 1134 EFSAVKSLVLGRIL 1147
EF+AVKSL+LG++L
Sbjct: 62 EFNAVKSLILGKVL 75
>gi|105990535 coagulation factor V precursor [Homo sapiens]
Length = 2224
Score = 86.3 bits (212), Expect = 2e-16
Identities = 49/126 (38%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 56 PGFARLNRRDGAGGWSPLVSNKYQWLQIDLGERMEVTAVATQG--GYGSSNWVTSYLLMF 113
P ARLN + W +N QWL+IDL + ++TA+ TQG S +V SY + +
Sbjct: 2098 PFRARLNAQGRVNAWQAKANNNKQWLEIDLLKIKKITAIITQGCKSLSSEMYVKSYTIHY 2157
Query: 114 SDSGWNWKQYRQEDSIWG--FSGNANADSVVYYRLQPSIKARFLRFIPLEWNPKGRIGMR 171
S+ G WK YR + S+ F GN N V P I +RF+R IP WN I +R
Sbjct: 2158 SEQGVEWKPYRLKSSMVDKIFEGNTNTKGHVKNFFNPPIISRFIRVIPKTWNQS--IALR 2215
Query: 172 IEVFGC 177
+E+FGC
Sbjct: 2216 LELFGC 2221
Score = 58.5 bits (140), Expect = 4e-08
Identities = 43/158 (27%), Positives = 75/158 (47%), Gaps = 12/158 (7%)
Query: 30 DCDDP--LVSALPQASFSSSSELSSSHGPGFARLNRRDGAGGWS--PLVSN--KYQWLQI 83
DC P L + + S +SE P ARLN WS L + W+Q+
Sbjct: 1906 DCRMPMGLSTGIISDSQIKASEFLGYWEPRLARLNNGGSYNAWSVEKLAAEFASKPWIQV 1965
Query: 84 DLGERMEVTAVATQGG--YGSSNWVTSYLLMFSDSGWNWKQYRQEDS--IWGFSGNANAD 139
D+ + + +T + TQG Y S + T + + +S + NW+ ++ + + F+GN++A
Sbjct: 1966 DMQKEVIITGIQTQGAKHYLKSCYTTEFYVAYSSNQINWQIFKGNSTRNVMYFNGNSDAS 2025
Query: 140 SVVYYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGC 177
++ + P I AR++R P R +R+E+ GC
Sbjct: 2026 TIKENQFDPPIVARYIRISPT--RAYNRPTLRLELQGC 2061
>gi|54873613 agrin [Homo sapiens]
Length = 2045
Score = 82.0 bits (201), Expect = 3e-15
Identities = 63/230 (27%), Positives = 99/230 (43%), Gaps = 18/230 (7%)
Query: 364 CSQPQSMPVTFLSSRSYLALPDFSGEEEVSATFQFRTWNKAGLLLFSELQLISGGILLFL 423
C + PV RS+LA P + +FR GLLL++ + L L
Sbjct: 1366 CEKVLGAPVPAFEGRSFLAFPTLRAYHTLRLALEFRALEPQGLLLYNGNARGKDFLALAL 1425
Query: 424 SDGKLKSNLYQPGKLPSDITAGVELNDGQWHSVSLSAKKNHLSVAVDGQMASAAPLLGPE 483
DG+++ + G P+ +T+ V + GQWH + LS +++VDG+ P+LG
Sbjct: 1426 LDGRVQLR-FDTGSGPAVLTSAVPVEPGQWHRLELSRHWRRGTLSVDGE----TPVLGES 1480
Query: 484 QIYSGG-----TYYFGGCPDKSFGSKCKSPL--GGFQGCMRLISISGKVVDLISVQQGSL 536
+ G + GG P+ + G +GC+RL+ ++ + ++L + G+
Sbjct: 1481 PSGTDGLNLDTDLFVGGVPEDQAAVALERTFVGAGLRGCIRLLDVNNQRLEL-GIGPGAA 1539
Query: 537 GNFSDLQIDSCGISDRCLPNYCEHGGECSQ-SWSTFHCNCTNTGYRGATC 585
S + CG CLPN C G C FHC C G G TC
Sbjct: 1540 TRGSG--VGECG-DHPCLPNPCHGGAPCQNLEAGRFHCQCP-PGRVGPTC 1585
Score = 62.4 bits (150), Expect = 3e-09
Identities = 72/281 (25%), Positives = 112/281 (39%), Gaps = 33/281 (11%)
Query: 821 FKTTASSGVFLENL----GIADFIRIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQW 876
F SG+ L N G DF+ + LR + F +D+G G I + P W
Sbjct: 1668 FLARGPSGLLLYNGQKTDGKGDFVSLALRDRRL-EFRYDLGKGAAVIRSREPVTLG--AW 1724
Query: 877 HHVRVERNMKEASLQVDQLTPKTQPAPADGHVLLQLNSQLFVGGT---------ATRQRG 927
V +ERN ++ +L+V P+ H +L L L+VGG A G
Sbjct: 1725 TRVSLERNGRKGALRVGD-GPRVLGESPVPHTVLNLKEPLYVGGAPDFSKLARAAAVSSG 1783
Query: 928 FLGCIRSLQLNGMTLDLEERAQVTPEVQPGCRGHCS-SYGKLCRNGGKCRERPIGFFCDC 986
F G I+ + L G L E +V C+ + G C NG C R + C C
Sbjct: 1784 FDGAIQLVSLGGRQLLTPEHVLRQVDVTSFAGHPCTRASGHPCLNGASCVPREAAYVCLC 1843
Query: 987 TFSAYTGPFCSNE-ISAYFGSGSSVIYNFQE--NYLLSKNSSSHAASFHGDMKLSREMIK 1043
++GP C + G ++ ++ + YL + S A L +
Sbjct: 1844 P-GGFSGPHCEKGLVEKSAGDVDTLAFDGRTFVEYLNAVTESEKA--------LQSNHFE 1894
Query: 1044 FSFRTTRTPSLLLFVSSFYK--EYLSVIIAKNGSLQIRYKL 1082
S RT T L+L+ + +Y+++ I +G LQ+ Y L
Sbjct: 1895 LSLRTEATQGLVLWSGKATERADYVALAIV-DGHLQLSYNL 1934
Score = 48.1 bits (113), Expect = 5e-05
Identities = 34/114 (29%), Positives = 53/114 (46%), Gaps = 13/114 (11%)
Query: 853 SFDVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQPAPADGHVLLQL 912
S+++G+ P + ++S N N+W V R +E SLQV P T +P G L
Sbjct: 1931 SYNLGSQP--VVLRSTVPVNTNRWLRVVAHREQREGSLQVGNEAPVTGSSPL-GATQLDT 1987
Query: 913 NSQLFVGG----------TATRQRGFLGCIRSLQLNGMTLDLEERAQVTPEVQP 956
+ L++GG GF+GC+R + + L L E A PE++P
Sbjct: 1988 DGALWLGGLPELPVGPALPKAYGTGFVGCLRDVVVGRHPLHLLEDAVTKPELRP 2041
Score = 44.3 bits (103), Expect = 8e-04
Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 17/211 (8%)
Query: 390 EEVSATFQFRTWNKAGLLLFSELQLISGG--ILLFLSDGKLKSNLYQPGKLPSDITAGVE 447
E+++ F +GLLL++ + G + L L D +L+ Y GK + I +
Sbjct: 1660 EKMALEVVFLARGPSGLLLYNGQKTDGKGDFVSLALRDRRLEFR-YDLGKGAAVIRSREP 1718
Query: 448 LNDGQWHSVSL--SAKKNHLSVAVDGQMASAAPLLGPEQIYS-GGTYYFGGCPDKSFGSK 504
+ G W VSL + +K L V ++ +P+ P + + Y GG PD S ++
Sbjct: 1719 VTLGAWTRVSLERNGRKGALRVGDGPRVLGESPV--PHTVLNLKEPLYVGGAPDFSKLAR 1776
Query: 505 CKSPLGGFQGCMRLISISGK--VVDLISVQQGSLGNFSDLQIDSCGISDRCLPNYCEHGG 562
+ GF G ++L+S+ G+ + ++Q + +F+ C R + C +G
Sbjct: 1777 AAAVSSGFDGAIQLVSLGGRQLLTPEHVLRQVDVTSFAG---HPC---TRASGHPCLNGA 1830
Query: 563 ECSQSWSTFHCNCTNTGYRGATCHNSIYEQS 593
C + + C C G+ G C + E+S
Sbjct: 1831 SCVPREAAYVCLCPG-GFSGPHCEKGLVEKS 1860
>gi|167830475 milk fat globule-EGF factor 8 protein isoform a [Homo
sapiens]
Length = 387
Score = 80.9 bits (198), Expect = 7e-15
Identities = 51/160 (31%), Positives = 82/160 (51%), Gaps = 15/160 (9%)
Query: 31 CDDPLV---SALPQASFSSSSELSS------SHGPGFARLNRRDGAGGWSPLVSNKYQWL 81
C +PL +++P ++SS + S P +ARL+++ W QWL
Sbjct: 230 CANPLGLKNNSIPDKQITASSSYKTWGLHLFSWNPSYARLDKQGNFNAWVAGSYGNDQWL 289
Query: 82 QIDLGERMEVTAVATQG--GYGSSNWVTSYLLMFSDSGWNWKQYR--QEDSIWGFSGNAN 137
Q+DLG EVT + TQG +GS +V SY + +S+ NW +Y+ + S F GN +
Sbjct: 290 QVDLGSSKEVTGIITQGARNFGSVQFVASYKVAYSNDSANWTEYQDPRTGSSKIFPGNWD 349
Query: 138 ADSVVYYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGC 177
S + I AR++R +P+ W+ RI +R+E+ GC
Sbjct: 350 NHSHKKNLFETPILARYVRILPVAWH--NRIALRLELLGC 387
Score = 51.6 bits (122), Expect = 5e-06
Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 17/131 (12%)
Query: 56 PGFARLNRRDGAGGWSPLVSNKYQWLQIDLGERMEVTAVATQGG--YGSSNWVTSYLLMF 113
P ARLNR W+P ++ W+Q++L RM VT V TQG S ++ ++ + +
Sbjct: 103 PELARLNRAGMVNAWTPSSNDDNPWIQVNLLRRMWVTGVVTQGASRLASHEYLKAFKVAY 162
Query: 114 SDSGWNW-------KQYRQEDSIWGFSGNANADSVVYYRLQPSIKARFLRFIPLEWNPKG 166
S +G + K++++ F GN N ++V + ++A+++R P +
Sbjct: 163 SLNGHEFDFIHDVNKKHKE------FVGNWNKNAVHVNLFETPVEAQYVRLYPTSCHT-- 214
Query: 167 RIGMRIEVFGC 177
+R E+ GC
Sbjct: 215 ACTLRFELLGC 225
>gi|10518506 coagulation factor VIII isoform b precursor [Homo
sapiens]
Length = 216
Score = 80.1 bits (196), Expect = 1e-14
Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 31 CDDPL---VSALPQASFSSSS---ELSSSHGPGFARLNRRDGAGGWSPLVSNKYQWLQID 84
C PL A+ A ++SS + ++ P ARL+ + + W P V+N +WLQ+D
Sbjct: 58 CSMPLGMESKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVD 117
Query: 85 LGERMEVTAVATQG--GYGSSNWVTSYLLMFSDSGWNWKQYRQEDSIWGFSGNANADSVV 142
+ M+VT V TQG +S +V +L+ S G W + Q + F GN ++ + V
Sbjct: 118 FQKTMKVTGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFTPV 177
Query: 143 YYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGC 177
L P + R+LR P W +I +R+EV GC
Sbjct: 178 VNSLDPPLLTRYLRIHPQSW--VHQIALRMEVLGC 210
>gi|4503647 coagulation factor VIII isoform a precursor [Homo sapiens]
Length = 2351
Score = 80.1 bits (196), Expect = 1e-14
Identities = 50/155 (32%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 31 CDDPL---VSALPQASFSSSS---ELSSSHGPGFARLNRRDGAGGWSPLVSNKYQWLQID 84
C PL A+ A ++SS + ++ P ARL+ + + W P V+N +WLQ+D
Sbjct: 2193 CSMPLGMESKAISDAQITASSYFTNMFATWSPSKARLHLQGRSNAWRPQVNNPKEWLQVD 2252
Query: 85 LGERMEVTAVATQG--GYGSSNWVTSYLLMFSDSGWNWKQYRQEDSIWGFSGNANADSVV 142
+ M+VT V TQG +S +V +L+ S G W + Q + F GN ++ + V
Sbjct: 2253 FQKTMKVTGVTTQGVKSLLTSMYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDSFTPV 2312
Query: 143 YYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFGC 177
L P + R+LR P W +I +R+EV GC
Sbjct: 2313 VNSLDPPLLTRYLRIHPQSW--VHQIALRMEVLGC 2345
Score = 58.9 bits (141), Expect = 3e-08
Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 8/130 (6%)
Query: 56 PGFARLNRRDGAGGWSPLVSNKYQWLQIDLGERMEVTAVATQGGYG--SSNWVTSYLLMF 113
P ARL+ WS + W+++DL M + + TQG SS +++ +++M+
Sbjct: 2067 PKLARLHYSGSINAWS--TKEPFSWIKVDLLAPMIIHGIKTQGARQKFSSLYISQFIIMY 2124
Query: 114 SDSGWNWKQYRQEDS--IWGFSGNANADSVVYYRLQPSIKARFLRFIPLEWNPKGRIGMR 171
S G W+ YR + + F GN ++ + + P I AR++R P ++ R +R
Sbjct: 2125 SLDGKKWQTYRGNSTGTLMVFFGNVDSSGIKHNIFNPPIIARYIRLHPTHYSI--RSTLR 2182
Query: 172 IEVFGCAYRS 181
+E+ GC S
Sbjct: 2183 MELMGCDLNS 2192
>gi|54792129 discoidin, CUB and LCCL domain containing 2 [Homo
sapiens]
Length = 775
Score = 79.7 bits (195), Expect = 2e-14
Identities = 54/183 (29%), Positives = 87/183 (47%), Gaps = 12/183 (6%)
Query: 3 SVTGAVLKTLLLLSTQNWNRVEAGNSYDCDDPLVSALPQASFSSSSELSSSHGPGFARLN 62
SV G + +L T S DP ++A ++ + +S P ARL
Sbjct: 275 SVVGHLSTSLFTFKTSGCYGTLGMESGVIADPQITASSVLEWTDHTGQENSWKPKKARLK 334
Query: 63 RRDGAGGWSPLVSNKYQWLQIDLGERMEVTAVATQGG--YGSSNWVTSYLLMFSDSGWNW 120
+ W+ +++YQWLQIDL + ++T + T G + +V++Y +++SD G W
Sbjct: 335 KPGPP--WAAFATDEYQWLQIDLNKEKKITGIITTGSTMVEHNYYVSAYRILYSDDGQKW 392
Query: 121 KQYR----QEDSIWGFSGNANADSVVYYRLQPSIKARFLRFIPLEWNPKGRIGMRIEVFG 176
YR ++D I F GN + V P I ARF+R P +W K I M++E+ G
Sbjct: 393 TVYREPGVEQDKI--FQGNKDYHQDVRNNFLPPIIARFIRVNPTQWQQK--IAMKMELLG 448
Query: 177 CAY 179
C +
Sbjct: 449 CQF 451
>gi|66346693 FAT tumor suppressor 1 precursor [Homo sapiens]
Length = 4588
Score = 79.3 bits (194), Expect = 2e-14
Identities = 62/183 (33%), Positives = 86/183 (46%), Gaps = 29/183 (15%)
Query: 852 FSFDVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEASLQVDQLTPKTQPAPADGHVLLQ 911
+ FD G+GP +SVQS ND QWH V +E N A L +DQ+ + AP L
Sbjct: 3888 YKFDCGSGPGIVSVQS-IQVNDGQWHAVALEVNGNYARLVLDQVHTASGTAPGTLKT-LN 3945
Query: 912 LNSQLFVGGTATRQ-----------RGFLGCIRSLQLNGMTLDLEER------AQVTPEV 954
L++ +F GG +Q GF GC+ S+ LNG L L + + + +V
Sbjct: 3946 LDNYVFFGGHIRQQGTRHGRSPQVGNGFRGCMDSIYLNGQELPLNSKPRSYAHIEESVDV 4005
Query: 955 QPGC----RGHCSSYGKLCRNGGKCRERPI-GFFCDCTFSAYTGPFCSNEISAYFGSGSS 1009
PGC C+S C+NGG C P G++C C+ + Y G C EIS S
Sbjct: 4006 SPGCFLTATEDCAS--NPCQNGGVCNPSPAGGYYCKCS-ALYIGTHC--EISVNPCSSKP 4060
Query: 1010 VIY 1012
+Y
Sbjct: 4061 CLY 4063
Score = 66.6 bits (161), Expect = 1e-10
Identities = 62/268 (23%), Positives = 122/268 (45%), Gaps = 14/268 (5%)
Query: 330 HGCLENLYYNGVDIIDLAKQQKPQIIAMGNVSFSCSQPQSMPVTFLSSRSYLALPDFSGE 389
HGC ++ G + + ++K + C SM +T S Y L + +
Sbjct: 3792 HGCEDDPCPEGSECVSDPWEEKHTCVCPSGRFGQCPGSSSMTLTGNSYVKY-RLTENENK 3850
Query: 390 EEVSATFQFRTWNKAGLLLFSELQLISGGILLFLSDGKLKSNLYQPGKLPSDITA-GVEL 448
E+ T + RT++ +++++ S +L + G+L+ + G P ++ +++
Sbjct: 3851 LEMKLTMRLRTYSTHAVVMYARGTDYS---ILEIHHGRLQYK-FDCGSGPGIVSVQSIQV 3906
Query: 449 NDGQWHSVSLSAKKNHLSVAVDGQMASAAPLLGPEQIYSGGTYYFGGCPDKSFGSK-CKS 507
NDGQWH+V+L N+ + +D ++ G + + Y F G + G++ +S
Sbjct: 3907 NDGQWHAVALEVNGNYARLVLDQVHTASGTAPGTLKTLNLDNYVFFGGHIRQQGTRHGRS 3966
Query: 508 PL--GGFQGCMRLISISGKVVDLISVQQGSLGNFSDLQID-SCGI--SDRCLPNYCEHGG 562
P GF+GCM I ++G+ + L S + + + C + ++ C N C++GG
Sbjct: 3967 PQVGNGFRGCMDSIYLNGQELPLNSKPRSYAHIEESVDVSPGCFLTATEDCASNPCQNGG 4026
Query: 563 ECSQS-WSTFHCNCTNTGYRGATCHNSI 589
C+ S ++C C+ Y G C S+
Sbjct: 4027 VCNPSPAGGYYCKCSAL-YIGTHCEISV 4053
Score = 48.5 bits (114), Expect = 4e-05
Identities = 39/175 (22%), Positives = 80/175 (45%), Gaps = 16/175 (9%)
Query: 175 FGCAYRSEVVDLDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREGPNGDHITL 234
FG S + L G S + YR + + ++ ++++ +T + ++++ G D+ L
Sbjct: 3823 FGQCPGSSSMTLTGNSYVKYRLTENE-NKLEMKLTMRLRTYSTHAVVMYARGT--DYSIL 3879
Query: 235 QLRRARLFLLINSGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRLGKQVNFTVDE-HRH 293
++ RL + G P ++ ++ + +D WH+V ++ G +D+ H
Sbjct: 3880 EIHHGRLQYKFDCGSG--PGIVSVQSIQV----NDGQWHAVALEVNGNYARLVLDQVHTA 3933
Query: 294 HFHARGEFNLMNLDYEISFGGI-----PAPGKSVSFPHRNFHGCLENLYYNGVDI 343
A G +NLD + FGG G+S + F GC++++Y NG ++
Sbjct: 3934 SGTAPGTLKTLNLDNYVFFGGHIRQQGTRHGRSPQVGN-GFRGCMDSIYLNGQEL 3987
Score = 39.7 bits (91), Expect = 0.019
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 551 DRCLPNYCEHGGECSQSWSTFHCNCTNTGYRGATCHNSIYEQ 592
D C N C HG C + ++HCNC++ YRG C ++ Q
Sbjct: 4129 DECSGNPCLHGALCENTHGSYHCNCSHE-YRGRHCEDAAPNQ 4169
Score = 38.1 bits (87), Expect = 0.056
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Query: 547 CGISDRCLPNYCEHGGECSQSWSTFHCNCTNTGYRGATCHNSIYEQSCEAYKHRG---NT 603
C +S C C++GG C S C C ++G+RG C + I E S H NT
Sbjct: 4087 CQLSPYCKDEPCKNGGTCFDSLDGAVCQC-DSGFRGERCQSDIDECSGNPCLHGALCENT 4145
Query: 604 SGFYY 608
G Y+
Sbjct: 4146 HGSYH 4150
Score = 35.4 bits (80), Expect = 0.36
Identities = 52/229 (22%), Positives = 84/229 (36%), Gaps = 39/229 (17%)
Query: 952 PEVQPGCRGHCSSYGKLCRNGGKCRERPIGFFCDCTFSAYTGPFCSNEISAYFGSGSSVI 1011
P V GC C G +C P C + C S S V
Sbjct: 3788 PPVHHGCEDDP------CPEGSECVSDPWEEKHTCVCPSGRFGQCPGSSSMTLTGNSYVK 3841
Query: 1012 YNFQENYLLSKNSSSHAASFHGDMKLSREMIKFSFRTTRTPSLLLFVSSFYKEYLSVIIA 1071
Y EN +N +MKL+ + RT T +++++ +Y S++
Sbjct: 3842 YRLTEN----ENKL--------EMKLTMRL-----RTYSTHAVVMYARG--TDY-SILEI 3881
Query: 1072 KNGSLQIRYKLNKYQEPDVVNFDFKNMADGQLHHIMINREEGVVFIEIDDNRRRQVHLSS 1131
+G LQ YK + P +V+ + DGQ H + + + +D QVH +S
Sbjct: 3882 HHGRLQ--YKFDCGSGPGIVSVQSIQVNDGQWHAVALEVNGNYARLVLD-----QVHTAS 3934
Query: 1132 GTEFSAVKSLVL------GRILEHSDVDQDTALAGAQGFTGCLSAVQLS 1174
GT +K+L L G + + GF GC+ ++ L+
Sbjct: 3935 GTAPGTLKTLNLDNYVFFGGHIRQQGTRHGRSPQVGNGFRGCMDSIYLN 3983
>gi|62420886 discoidin domain receptor family, member 2 precursor
[Homo sapiens]
Length = 855
Score = 74.7 bits (182), Expect = 5e-13
Identities = 47/177 (26%), Positives = 83/177 (46%), Gaps = 8/177 (4%)
Query: 39 LPQASFSSSSELSSSHGPGFARLNRRDGAGGWSPLV----SNKYQWLQIDLGERMEVTAV 94
+P ++SS+ S S + RL+ +G G W P + + ++LQIDL +T V
Sbjct: 41 IPDEDITASSQWSESTAAKYGRLDSEEGDGAWCPEIPVEPDDLKEFLQIDLHTLHFITLV 100
Query: 95 ATQGGYGSSNWVT---SYLLMFSDSGWNWKQYRQEDSIWGFSGNANADSVVYYRLQPSIK 151
TQG + + + Y + +S G W +R GN+N + L+P I
Sbjct: 101 GTQGRHAGGHGIEFAPMYKINYSRDGTRWISWRNRHGKQVLDGNSNPYDIFLKDLEPPIV 160
Query: 152 ARFLRFIPLEWNPKGRIGMRIEVFGCAYRSEVVDLDGKSSLLYRFDQKSLSPIKDII 208
ARF+RFIP+ + + MR+E++GC + +V + + + S+ + D +
Sbjct: 161 ARFVRFIPVT-DHSMNVCMRVELYGCVWLDGLVSYNAPAGQQFVLPGGSIIYLNDSV 216
>gi|62420884 discoidin domain receptor family, member 2 precursor
[Homo sapiens]
Length = 855
Score = 74.7 bits (182), Expect = 5e-13
Identities = 47/177 (26%), Positives = 83/177 (46%), Gaps = 8/177 (4%)
Query: 39 LPQASFSSSSELSSSHGPGFARLNRRDGAGGWSPLV----SNKYQWLQIDLGERMEVTAV 94
+P ++SS+ S S + RL+ +G G W P + + ++LQIDL +T V
Sbjct: 41 IPDEDITASSQWSESTAAKYGRLDSEEGDGAWCPEIPVEPDDLKEFLQIDLHTLHFITLV 100
Query: 95 ATQGGYGSSNWVT---SYLLMFSDSGWNWKQYRQEDSIWGFSGNANADSVVYYRLQPSIK 151
TQG + + + Y + +S G W +R GN+N + L+P I
Sbjct: 101 GTQGRHAGGHGIEFAPMYKINYSRDGTRWISWRNRHGKQVLDGNSNPYDIFLKDLEPPIV 160
Query: 152 ARFLRFIPLEWNPKGRIGMRIEVFGCAYRSEVVDLDGKSSLLYRFDQKSLSPIKDII 208
ARF+RFIP+ + + MR+E++GC + +V + + + S+ + D +
Sbjct: 161 ARFVRFIPVT-DHSMNVCMRVELYGCVWLDGLVSYNAPAGQQFVLPGGSIIYLNDSV 216
>gi|38788416 laminin, alpha 1 precursor [Homo sapiens]
Length = 3075
Score = 74.3 bits (181), Expect = 7e-13
Identities = 79/349 (22%), Positives = 147/349 (42%), Gaps = 34/349 (9%)
Query: 186 LDGKSSLLYRFDQKSLSPIKDIISLKFKTMQSDGILLHREGPN-GDHITLQLRRARLFLL 244
L S + F+Q ++ K + L +T S G++ + N D+ LQL RL +
Sbjct: 2718 LTQNSHFILPFNQSAVRK-KLSVELSIRTFASSGLIYYMAHQNQADYAVLQLHGGRLHFM 2776
Query: 245 INSGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRLGKQVNFTVDEHRHHF-HARGEFNL 303
+ G+ + ++ +LL D WH+V + ++ TVD G+ +
Sbjct: 2777 FDLGKGR-------TKVSHPALLSDGKWHTVKTDYVKRKGFITVDGRESPMVTVVGDGTM 2829
Query: 304 MNLDYEISFGGIPAP--GKSVSFPHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNVS 361
++++ GG+P+ + + + C+ ++ N + + P N
Sbjct: 2830 LDVEGLFYLGGLPSQYQARKIGNITHSIPACIGDVTVNSKQL----DKDSPVSAFTVNRC 2885
Query: 362 FSCSQPQSMPVTFLSSRSYLAL--PDFSGEEEVSATFQFRTWNKAGLLLFSELQLISGGI 419
++ +Q T+ Y AL + + +V+ T +FRT ++ G+LL + I
Sbjct: 2886 YAVAQEG----TYFDGSGYAALVKEGYKVQSDVNITLEFRTSSQNGVLLGISTAKVDA-I 2940
Query: 420 LLFLSDGKLKSNLYQPGKLPSDITAGVE------LNDGQWHSVSLSAKKNHLSVAVDGQM 473
L L DGK+ L+ ITA E L DG+WH++ + K+ +++ VDG
Sbjct: 2941 GLELVDGKV---LFHVNNGAGRITAAYEPKTATVLCDGKWHTLQANKSKHRITLIVDGNA 2997
Query: 474 ASA-APLLGPEQIYSGGTYYFGGCPDKSFGSKCKSPLGGFQGCMRLISI 521
A +P + + Y GG P KC F+GC+R +++
Sbjct: 2998 VGAESPHTQSTSVDTNNPIYVGGYP-AGVKQKCLRSQTSFRGCLRKLAL 3045
Score = 70.9 bits (172), Expect = 8e-12
Identities = 85/376 (22%), Positives = 158/376 (42%), Gaps = 52/376 (13%)
Query: 199 KSLSPIKDIISLKFKTMQSDGILL-----------HREGPNGDHITLQLRRARLFLLINS 247
KSLSP + + + F T S GI+L RE + ++ L + + +N
Sbjct: 2502 KSLSPESEWL-VTFATTNSSGIILAALGGDVEKRGDREEAHVPFFSVMLIGGNIEVHVNP 2560
Query: 248 GEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRLGKQVNFTVDEHRHHFHARG---EFNLM 304
G+ L++ G+ D Q HS+ + R + + +DE+ G E +
Sbjct: 2561 GDGT-GLRKALLHAPTGTCSDGQA-HSISLVRNRRIITVQLDENNPVEMKLGTLVESRTI 2618
Query: 305 NLDYEISFGGIP-APGKSVSFPHRNFHGCLENLYYN----------GVDIIDLAK---QQ 350
N+ + GGIP G S+ R+FHGC++NL +N G + +DL +
Sbjct: 2619 NVS-NLYVGGIPEGEGTSLLTMRRSFHGCIKNLIFNLELLDFNSAVGHEQVDLDTCWLSE 2677
Query: 351 KPQIIAMGNVSFSCSQPQSMPVTF----------------LSSRSYLALP--DFSGEEEV 392
+P++ S +P++ P L+ S+ LP + +++
Sbjct: 2678 RPKLAPDAEDSKLLPEPRAFPEQCVVDAALEYVPGAHQFGLTQNSHFILPFNQSAVRKKL 2737
Query: 393 SATFQFRTWNKAGLLLFSELQLISGGILLFLSDGKLKSNLYQPGKLPSDITAGVELNDGQ 452
S RT+ +GL+ + Q + +L L G+L ++ GK + ++ L+DG+
Sbjct: 2738 SVELSIRTFASSGLIYYMAHQNQADYAVLQLHGGRLHF-MFDLGKGRTKVSHPALLSDGK 2796
Query: 453 WHSVSLSAKKNHLSVAVDGQMASAAPLLGPEQIYS-GGTYYFGGCPDKSFGSKCKSPLGG 511
WH+V K + VDG+ + ++G + G +Y GG P + K +
Sbjct: 2797 WHTVKTDYVKRKGFITVDGRESPMVTVVGDGTMLDVEGLFYLGGLPSQYQARKIGNITHS 2856
Query: 512 FQGCMRLISISGKVVD 527
C+ ++++ K +D
Sbjct: 2857 IPACIGDVTVNSKQLD 2872
Score = 48.5 bits (114), Expect = 4e-05
Identities = 38/145 (26%), Positives = 69/145 (47%), Gaps = 20/145 (13%)
Query: 817 VSFFFKTTASSGV--FLENLGIADFIRIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDN 874
+ F T + +G+ +L + G DF+ IEL V + D+G+GP I++ + +N+
Sbjct: 2329 IIMLFNTFSPNGLLLYLGSYGTKDFLSIELFRGRVKVMT-DLGSGP--ITLLTDRRYNNG 2385
Query: 875 QWHHVRVERNMKEASLQV------DQLTPKTQPAPADGHVLLQLNSQ-LFVGGTATRQ-- 925
W+ + +RN K+ L V K P L +L+ ++VGG +
Sbjct: 2386 TWYKIAFQRNRKQGVLAVIDAYNTSNKETKQGETPGASSDLNRLDKDPIYVGGLPRSRVV 2445
Query: 926 ------RGFLGCIRSLQLNGMTLDL 944
+ F+GCI++L+++ T DL
Sbjct: 2446 RRGVTTKSFVGCIKNLEISRSTFDL 2470
Score = 47.8 bits (112), Expect = 7e-05
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 17/130 (13%)
Query: 830 FLENLGIADFIRIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQWHHVRVERNMKEAS 889
+L + +DF+ +E+R V F +D+G+G + +DN+WH + V R S
Sbjct: 2157 YLGSSTASDFLAVEMRRGRVA-FLWDLGSGSTRLEFPD-FPIDDNRWHSIHVARFGNIGS 2214
Query: 890 LQVDQLT------PKTQPAPADGHVLLQLNSQL-FVGG--------TATRQRGFLGCIRS 934
L V +++ KT +P +VL NS L FVGG A + F GC+
Sbjct: 2215 LSVKEMSSNQKSPTKTSKSPGTANVLDVNNSTLMFVGGLGGQIKKSPAVKVTHFKGCLGE 2274
Query: 935 LQLNGMTLDL 944
LNG ++ L
Sbjct: 2275 AFLNGKSIGL 2284
Score = 43.1 bits (100), Expect = 0.002
Identities = 76/355 (21%), Positives = 130/355 (36%), Gaps = 48/355 (13%)
Query: 208 ISLKFKTMQSDGILLHREGPNG-DHITLQLRRARLFLL--INSGEAKLPSTSTLVNLTLG 264
++L KT + D +L + D + +++RR R+ L + SG +L +
Sbjct: 2142 LTLNVKTQEPDNLLFYLGSSTASDFLAVEMRRGRVAFLWDLGSGSTRLEFPDFPI----- 2196
Query: 265 SLLDDQHWHSVLIQRLGKQVNFTVDEHRHH-------FHARGEFNLMNLDYE--ISFGGI 315
DD WHS+ + R G + +V E + + G N+++++ + GG+
Sbjct: 2197 ---DDNRWHSIHVARFGNIGSLSVKEMSSNQKSPTKTSKSPGTANVLDVNNSTLMFVGGL 2253
Query: 316 PAP-GKSVSFPHRNFHGCLENLYYNGVDIIDLAKQQKPQIIAMGNVSFSCSQPQSMPVTF 374
KS + +F GCL + NG I L + + G F SQ + P
Sbjct: 2254 GGQIKKSPAVKVTHFKGCLGEAFLNGKS-IGLWNYIEREGKCRG--CFGSSQNED-PSFH 2309
Query: 375 LSSRSYLALPDFSGEEEVSATFQFRTWNKAGLLLFSELQLISGGILLFLSDGKLKSNLYQ 434
Y + F T++ GLLL+ + + L G++K +
Sbjct: 2310 FDGSGYSVVEKSLPATVTQIIMLFNTFSPNGLLLYLGSYGTKDFLSIELFRGRVKV-MTD 2368
Query: 435 PGKLPSDITAGVELNDGQWHSVSLSAKKNHLSVAV------------DGQMASAAPLLGP 482
G P + N+G W+ ++ + +AV G+ A+ L
Sbjct: 2369 LGSGPITLLTDRRYNNGTWYKIAFQRNRKQGVLAVIDAYNTSNKETKQGETPGASSDLNR 2428
Query: 483 EQIYSGGTYYFGGCPDKSF---GSKCKSPLGGFQGCMRLISISGKVVDLISVQQG 534
Y GG P G KS F GC++ + IS DL+ G
Sbjct: 2429 ---LDKDPIYVGGLPRSRVVRRGVTTKS----FVGCIKNLEISRSTFDLLRNSYG 2476
Score = 38.9 bits (89), Expect = 0.033
Identities = 34/143 (23%), Positives = 65/143 (45%), Gaps = 17/143 (11%)
Query: 812 ELSADVSFFFKTTASSGV--FLENLGIADFIRIELRSPTVVTFSFDVGNGPFEISVQSPT 869
+LS ++S +T ASSG+ ++ + AD+ ++L + F FD+G G ++S P
Sbjct: 2736 KLSVELSI--RTFASSGLIYYMAHQNQADYAVLQLHGGRL-HFMFDLGKGRTKVS--HPA 2790
Query: 870 HFNDNQWHHVRVERNMKEASLQVDQLTPKTQPAPADGHVLLQLNSQLFVGGTATRQR--- 926
+D +WH V+ + ++ + VD DG +L + ++GG ++ +
Sbjct: 2791 LLSDGKWHTVKTDYVKRKGFITVDGRESPMVTVVGDG-TMLDVEGLFYLGGLPSQYQARK 2849
Query: 927 ------GFLGCIRSLQLNGMTLD 943
CI + +N LD
Sbjct: 2850 IGNITHSIPACIGDVTVNSKQLD 2872
Score = 37.0 bits (84), Expect = 0.12
Identities = 46/172 (26%), Positives = 67/172 (38%), Gaps = 23/172 (13%)
Query: 794 SASFDTEASYLHFPTFHGELSADVSFFFKTTASSGVFLENLGIADFIRIELRSPTVVTFS 853
S SF + Y+ P ++ F TT SSG+ L LG R + V FS
Sbjct: 2488 SVSF-LKGGYIELPPKSLSPESEWLVTFATTNSSGIILAALGGDVEKRGDREEAHVPFFS 2546
Query: 854 FDVGNGPFEISVQ-------------SPTHF-NDNQWHHVRVERNMKEASLQVDQLTPKT 899
+ G E+ V +PT +D Q H + + RN + ++Q+D+ P
Sbjct: 2547 VMLIGGNIEVHVNPGDGTGLRKALLHAPTGTCSDGQAHSISLVRNRRIITVQLDENNPVE 2606
Query: 900 QPAPADGHVLLQLNSQLFVGG--------TATRQRGFLGCIRSLQLNGMTLD 943
S L+VGG T +R F GCI++L N LD
Sbjct: 2607 MKLGTLVESRTINVSNLYVGGIPEGEGTSLLTMRRSFHGCIKNLIFNLELLD 2658
>gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo
sapiens]
Length = 1158
Score = 73.6 bits (179), Expect = 1e-12
Identities = 47/142 (33%), Positives = 66/142 (46%), Gaps = 11/142 (7%)
Query: 46 SSSELSSSHGPGFARLNRRDGA-------GGWSPLVSNKYQWLQIDLGERMEVTAVATQG 98
+SS L G RLN + GA G W + QW+++D T V TQG
Sbjct: 402 ASSMLRHGLGAQRGRLNMQTGATEDDYYDGAWCAEDDARTQWIEVDTRRTTRFTGVITQG 461
Query: 99 GYGS--SNWVTSYLLMFSDSGWNWKQYRQEDSIWGFSGNANADSVVYYRLQPSIKARFLR 156
S ++VT++ + FS+ W Y F GN + D+ V L + ARF+R
Sbjct: 462 RDSSIHDDFVTTFFVGFSNDSQTWVMYTNGYEEMTFHGNVDKDTPVLSELPEPVVARFIR 521
Query: 157 FIPLEWNPKGRIGMRIEVFGCA 178
PL WN G + MR+EV GC+
Sbjct: 522 IYPLTWN--GSLCMRLEVLGCS 541
>gi|33469935 EGF-like, fibronectin type III and laminin G domains
isoform 3 [Homo sapiens]
Length = 375
Score = 73.6 bits (179), Expect = 1e-12
Identities = 97/388 (25%), Positives = 144/388 (37%), Gaps = 76/388 (19%)
Query: 821 FKTTASSGVFLENL--GIADFIRIELRSPTVVTFSFDVGNGPFEISVQSPTHFNDNQWHH 878
F+ + GV L + G DF+ I L V F FD G+G + + P + WH
Sbjct: 7 FRPDSGDGVLLYSYDTGSKDFLSINLAGGHV-EFRFDCGSGTGVLRSEDPLTLGN--WHE 63
Query: 879 VRVERNMKEASLQVDQLTPKTQPAPADG-HVLLQLNSQLFVGGTATRQ---------RGF 928
+RV R K LQVD+ K A+G ++ N+ +F+GG + F
Sbjct: 64 LRVSRTAKNGILQVDK--QKIVEGMAEGGFTQIKCNTDIFIGGVPNYDDVKKNSGVLKPF 121
Query: 929 LGCIRSLQLNGMTL----DLEERAQVTPEVQPGCRGHCSSYGKLCRNGGKCRERPIGFFC 984
G I+ + LN T+ D V P R C+ +GG CR R G+ C
Sbjct: 122 SGSIQKIILNDRTIHVKHDFTSGVNVENAAHPCVRAPCA-------HGGSCRPRKEGYDC 174
Query: 985 DCTFSAYTGPFCSN------EISAYFGSGSSVIYNFQENYLLSKNSSSHAASFHGDMKLS 1038
DC + G C EI + G Y +N + K S S
Sbjct: 175 DCPL-GFEGLHCQKAIIEAIEIPQFIGRS----YLTYDNPDILKRVSG-----------S 218
Query: 1039 REMIKFSFRTTRTPSLLLFVSSFYKEYLSVIIA---KNGSLQIRYKLNKYQEPDVVNFDF 1095
R + F+TT LLL+ S I+ ++G+L Y L +VN F
Sbjct: 219 RSNVFMRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSF 278
Query: 1096 KNMADGQLHHIMINREEGVVFIEIDD---------NRRRQVHLSSGTEFSAVKSLVLGRI 1146
DG+ H + R+ I +DD RQ++++ +K + L
Sbjct: 279 N---DGRWHRVKAVRDGQSGKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIAL--- 332
Query: 1147 LEHSDVDQDTALAGAQGFTGCLSAVQLS 1174
T +G GC+S LS
Sbjct: 333 --------HTNRQYMRGLVGCISHFTLS 352
Score = 56.6 bits (135), Expect = 2e-07
Identities = 45/137 (32%), Positives = 66/137 (48%), Gaps = 17/137 (12%)
Query: 815 ADVSFFFKTTASSGVFLENLGI-----ADFIRIELRSPTVVTFSFDVGNGPFEISVQSPT 869
++V FKTTA G+ L +DFI + LR +V FS+++G+G I V
Sbjct: 220 SNVFMRFKTTAKDGLLLWRGDSPMRPNSDFISLGLRDGALV-FSYNLGSGVASIMVNGS- 277
Query: 870 HFNDNQWHHVRVERNMKEASLQVDQLTPKTQPAPADGHVLLQLNSQLFVGGT------AT 923
FND +WH V+ R+ + + VD +T +P L +N L+VGG
Sbjct: 278 -FNDGRWHRVKAVRDGQSGKITVDDYGARTGKSPGMMR-QLNINGALYVGGMKEIALHTN 335
Query: 924 RQ--RGFLGCIRSLQLN 938
RQ RG +GCI L+
Sbjct: 336 RQYMRGLVGCISHFTLS 352
Score = 47.0 bits (110), Expect = 1e-04
Identities = 83/359 (23%), Positives = 136/359 (37%), Gaps = 57/359 (15%)
Query: 210 LKFKTMQSDGILLHR-EGPNGDHITLQLRRARLFLLIN--SGEAKLPSTSTLVNLTLGSL 266
+ F+ DG+LL+ + + D +++ L + + SG L S L TLG+
Sbjct: 5 ITFRPDSGDGVLLYSYDTGSKDFLSINLAGGHVEFRFDCGSGTGVLRSEDPL---TLGN- 60
Query: 267 LDDQHWHSVLIQRLGKQVNFTVDEHRH-HFHARGEFNLMNLDYEISFGGIPAPG--KSVS 323
WH + + R K VD+ + A G F + + +I GG+P K S
Sbjct: 61 -----WHELRVSRTAKNGILQVDKQKIVEGMAEGGFTQIKCNTDIFIGGVPNYDDVKKNS 115
Query: 324 FPHRNFHGCLENLYYN------------GVDIIDLAKQQKPQIIAMGNV------SFSCS 365
+ F G ++ + N GV++ + A A G + C
Sbjct: 116 GVLKPFSGSIQKIILNDRTIHVKHDFTSGVNVENAAHPCVRAPCAHGGSCRPRKEGYDCD 175
Query: 366 QP-------------QSMPVTFLSSRSYLALPDFSGEEEVSAT-----FQFRTWNKAGLL 407
P +++ + RSYL + + VS + +F+T K GLL
Sbjct: 176 CPLGFEGLHCQKAIIEAIEIPQFIGRSYLTYDNPDILKRVSGSRSNVFMRFKTTAKDGLL 235
Query: 408 LF---SELQLISGGILLFLSDGKLKSNLYQPGKLPSDITAGVELNDGQWHSVSLSAKKNH 464
L+ S ++ S I L L DG L + Y G + I NDG+WH V
Sbjct: 236 LWRGDSPMRPNSDFISLGLRDGALVFS-YNLGSGVASIMVNGSFNDGRWHRVKAVRDGQS 294
Query: 465 LSVAVDGQMASAAPLLG-PEQIYSGGTYYFGGCPDKSFGSKCKSPLGGFQGCMRLISIS 522
+ VD A G Q+ G Y GG + + + + + G GC+ ++S
Sbjct: 295 GKITVDDYGARTGKSPGMMRQLNINGALYVGGMKEIALHTN-RQYMRGLVGCISHFTLS 352
Score = 46.2 bits (108), Expect = 2e-04
Identities = 39/141 (27%), Positives = 62/141 (43%), Gaps = 14/141 (9%)
Query: 182 EVVDLDGKSSLLYRFDQ--KSLSPIKDIISLKFKTMQSDGILLHREG----PNGDHITLQ 235
E+ G+S L Y K +S + + ++FKT DG+LL R PN D I+L
Sbjct: 194 EIPQFIGRSYLTYDNPDILKRVSGSRSNVFMRFKTTAKDGLLLWRGDSPMRPNSDFISLG 253
Query: 236 LRRARLFLLINSGEAKLPSTSTLVNLTLGSLLDDQHWHSVLIQRLGKQVNFTVDEH-RHH 294
LR L N G S + ++ + +D WH V R G+ TVD++
Sbjct: 254 LRDGALVFSYNLG-------SGVASIMVNGSFNDGRWHRVKAVRDGQSGKITVDDYGART 306
Query: 295 FHARGEFNLMNLDYEISFGGI 315
+ G +N++ + GG+
Sbjct: 307 GKSPGMMRQLNINGALYVGGM 327
Score = 39.3 bits (90), Expect = 0.025
Identities = 32/142 (22%), Positives = 56/142 (39%), Gaps = 10/142 (7%)
Query: 451 GQWHSVSLSAKKNHLSVAVDGQ-MASAAPLLGPEQIYSGGTYYFGGCPDKSFGSKCKSPL 509
G WH + +S + + VD Q + G QI + GG P+ K L
Sbjct: 59 GNWHELRVSRTAKNGILQVDKQKIVEGMAEGGFTQIKCNTDIFIGGVPNYDDVKKNSGVL 118
Query: 510 GGFQGCMRLISISGKVVDLISVQQGSLGNFSDLQIDSCGISDRCLPNYCEHGGECSQSWS 569
F G ++ I ++ + + + S + +++ + C+ C HGG C
Sbjct: 119 KPFSGSIQKIILNDRTIHV------KHDFTSGVNVENA--AHPCVRAPCAHGGSCRPRKE 170
Query: 570 TFHCNCTNTGYRGATCHNSIYE 591
+ C+C G+ G C +I E
Sbjct: 171 GYDCDCP-LGFEGLHCQKAIIE 191
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,827,772
Number of Sequences: 37866
Number of extensions: 2343295
Number of successful extensions: 7174
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 90
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 5706
Number of HSP's gapped (non-prelim): 1094
length of query: 1308
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1194
effective length of database: 13,930,794
effective search space: 16633368036
effective search space used: 16633368036
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.