LOC642406 17726

Name: LOC642406	Sequence: fasta or formatted (380aa)		NCBI GI: 239743729
Description: PREDICTED: similar to contactin associated protein-like 3B		Referenced in: Neurons
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.8 22 1 C cysteine 1.1 4 1 D aspartate 4.5 17 2 E glutamate 3.9 15 2 F phenylalanine 4.5 17 2 G glycine 8.2 31 2 H histidine 3.9 15 2 I isoleucine 3.9 15 1 K lysine 5.0 19 2 L leucine 12.4 47 4 M methionine 1.8 7 2 N asparagine 4.5 17 1 P proline 5.3 20 2 Q glutamine 4.5 17 1 R arginine 5.3 20 2 S serine 8.9 34 4 T threonine 5.5 21 2 V valine 5.8 22 2 W tryptophan 2.4 9 1 Y tyrosine 2.9 11 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to contactin associated protein-... LOC389722 0.922 PREDICTED: hypothetical protein LOC389722 isoform 2... LOC389722 0.922 PREDICTED: hypothetical protein LOC389722 isoform 1... CNTNAP3 0.921 cell recognition molecule CASPR3 CNTNAP4 0.695 cell recognition protein CASPR4 isoform 1 CNTNAP4 0.559 cell recognition protein CASPR4 isoform 2 CNTNAP5 0.531 contactin associated protein-like 5 CNTNAP2 0.450 cell recognition molecule Caspr2 precursor CNTNAP1 0.292 contactin associated protein 1 precursor MFGE8 0.085 milk fat globule-EGF factor 8 protein isoform a [Ho... F5 0.081 coagulation factor V precursor DDR2 0.078 discoidin domain receptor family, member 2 precursor... DDR2 0.078 discoidin domain receptor family, member 2 precursor... DDR1 0.071 discoidin domain receptor family, member 1 isoform b... DDR1 0.071 discoidin domain receptor family, member 1 isoform c... DDR1 0.071 discoidin domain receptor family, member 1 isoform a... AEBP1 0.070 adipocyte enhancer binding protein 1 precursor [Homo... F8 0.069 coagulation factor VIII isoform b precursor F8 0.069 coagulation factor VIII isoform a precursor NRP2 0.069 neuropilin 2 isoform 3 precursor NRP2 0.069 neuropilin 2 isoform 5 precursor NRP2 0.069 neuropilin 2 isoform 1 precursor NRP2 0.069 neuropilin 2 isoform 6 precursor NRP2 0.069 neuropilin 2 isoform 4 precursor NRP2 0.069 neuropilin 2 isoform 2 precursor NRP1 0.066 neuropilin 1 isoform c NRP1 0.066 neuropilin 1 isoform b NRP1 0.066 neuropilin 1 isoform a EDIL3 0.066 EGF-like repeats and discoidin I-like domains-contai... RS1 0.063 X-linked juvenile retinoschisis protein precursor [H... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.