Search of human proteins with 239741546

Search of human proteins with 239741546

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239741546 PREDICTED: hypothetical protein XP_002342233 [Homo
sapiens]
         (262 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239747677 PREDICTED: hypothetical protein [Homo sapiens]           555   e-158
gi|239741546 PREDICTED: hypothetical protein XP_002342233 [Homo ...   555   e-158
gi|110832843 TBP-associated factor 4 [Homo sapiens]                    51   9e-07
gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap...    50   2e-06
gi|156071470 hyperpolarization activated cyclic nucleotide-gated...    50   2e-06
gi|153792074 proline rich 12 [Homo sapiens]                            49   6e-06
gi|239754512 PREDICTED: hypothetical protein [Homo sapiens]            48   8e-06
gi|169167066 PREDICTED: hypothetical protein [Homo sapiens]            48   8e-06
gi|113416187 PREDICTED: hypothetical protein [Homo sapiens]            48   8e-06
gi|113415691 PREDICTED: hypothetical protein [Homo sapiens]            48   8e-06
gi|171543895 ataxin 2 [Homo sapiens]                                   48   8e-06
gi|239749073 PREDICTED: hypothetical protein [Homo sapiens]            48   1e-05
gi|239743099 PREDICTED: hypothetical protein XP_002342754 [Homo ...    48   1e-05
gi|239508751 PREDICTED: hypothetical protein [Homo sapiens]            48   1e-05
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin...    48   1e-05
gi|13273315 homeobox B4 [Homo sapiens]                                 47   1e-05
gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]            47   2e-05
gi|239743620 PREDICTED: hypothetical protein [Homo sapiens]            47   2e-05
gi|238859557 regulatory factor X1 [Homo sapiens]                       47   2e-05
gi|194578898 hypothetical protein LOC100170841 [Homo sapiens]          47   2e-05
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]             46   3e-05
gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo ...    46   3e-05
gi|239753114 PREDICTED: hypothetical protein [Homo sapiens]            46   3e-05
gi|169206459 PREDICTED: hypothetical protein LOC100132234 [Homo ...    46   3e-05
gi|169205915 PREDICTED: hypothetical protein LOC100132234 [Homo ...    46   3e-05
gi|163965366 nascent polypeptide-associated complex alpha subuni...    46   3e-05
gi|56549696 E1A binding protein p400 [Homo sapiens]                    46   4e-05
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo...    46   4e-05
gi|113416879 PREDICTED: hypothetical protein [Homo sapiens]            45   5e-05
gi|47132519 Ras association and pleckstrin homology domains 1 is...    45   5e-05

>gi|239747677 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 262

 Score =  555 bits (1429), Expect = e-158
 Identities = 262/262 (100%), Positives = 262/262 (100%)

Query: 1   MLSPLARAPGLPPNAARRAGENEDRSAVSDFAGTSLRGSCGRCKGSCVPGPSNARRSFAP 60
           MLSPLARAPGLPPNAARRAGENEDRSAVSDFAGTSLRGSCGRCKGSCVPGPSNARRSFAP
Sbjct: 1   MLSPLARAPGLPPNAARRAGENEDRSAVSDFAGTSLRGSCGRCKGSCVPGPSNARRSFAP 60

Query: 61  FPLENWISYLRGRGSRSERGRECACARARLARARSPHSMSPTHFHGASAPPPPPPRLAQP 120
           FPLENWISYLRGRGSRSERGRECACARARLARARSPHSMSPTHFHGASAPPPPPPRLAQP
Sbjct: 61  FPLENWISYLRGRGSRSERGRECACARARLARARSPHSMSPTHFHGASAPPPPPPRLAQP 120

Query: 121 RAGPAPPPPGPPSLRRAPINQPRRCQSSGGSPRRCHCSSVPGAPAPASQLPRPAGEVNKV 180
           RAGPAPPPPGPPSLRRAPINQPRRCQSSGGSPRRCHCSSVPGAPAPASQLPRPAGEVNKV
Sbjct: 121 RAGPAPPPPGPPSLRRAPINQPRRCQSSGGSPRRCHCSSVPGAPAPASQLPRPAGEVNKV 180

Query: 181 KYPSAARGPGRSTLGVGCEPAASPAAGGWAGVTSSDSRAVPHTLLPQRPLQLFVARSCSW 240
           KYPSAARGPGRSTLGVGCEPAASPAAGGWAGVTSSDSRAVPHTLLPQRPLQLFVARSCSW
Sbjct: 181 KYPSAARGPGRSTLGVGCEPAASPAAGGWAGVTSSDSRAVPHTLLPQRPLQLFVARSCSW 240

Query: 241 RFSPESQARSEHWAPRLRCGPE 262
           RFSPESQARSEHWAPRLRCGPE
Sbjct: 241 RFSPESQARSEHWAPRLRCGPE 262


>gi|239741546 PREDICTED: hypothetical protein XP_002342233 [Homo
           sapiens]
          Length = 262

 Score =  555 bits (1429), Expect = e-158
 Identities = 262/262 (100%), Positives = 262/262 (100%)

Query: 1   MLSPLARAPGLPPNAARRAGENEDRSAVSDFAGTSLRGSCGRCKGSCVPGPSNARRSFAP 60
           MLSPLARAPGLPPNAARRAGENEDRSAVSDFAGTSLRGSCGRCKGSCVPGPSNARRSFAP
Sbjct: 1   MLSPLARAPGLPPNAARRAGENEDRSAVSDFAGTSLRGSCGRCKGSCVPGPSNARRSFAP 60

Query: 61  FPLENWISYLRGRGSRSERGRECACARARLARARSPHSMSPTHFHGASAPPPPPPRLAQP 120
           FPLENWISYLRGRGSRSERGRECACARARLARARSPHSMSPTHFHGASAPPPPPPRLAQP
Sbjct: 61  FPLENWISYLRGRGSRSERGRECACARARLARARSPHSMSPTHFHGASAPPPPPPRLAQP 120

Query: 121 RAGPAPPPPGPPSLRRAPINQPRRCQSSGGSPRRCHCSSVPGAPAPASQLPRPAGEVNKV 180
           RAGPAPPPPGPPSLRRAPINQPRRCQSSGGSPRRCHCSSVPGAPAPASQLPRPAGEVNKV
Sbjct: 121 RAGPAPPPPGPPSLRRAPINQPRRCQSSGGSPRRCHCSSVPGAPAPASQLPRPAGEVNKV 180

Query: 181 KYPSAARGPGRSTLGVGCEPAASPAAGGWAGVTSSDSRAVPHTLLPQRPLQLFVARSCSW 240
           KYPSAARGPGRSTLGVGCEPAASPAAGGWAGVTSSDSRAVPHTLLPQRPLQLFVARSCSW
Sbjct: 181 KYPSAARGPGRSTLGVGCEPAASPAAGGWAGVTSSDSRAVPHTLLPQRPLQLFVARSCSW 240

Query: 241 RFSPESQARSEHWAPRLRCGPE 262
           RFSPESQARSEHWAPRLRCGPE
Sbjct: 241 RFSPESQARSEHWAPRLRCGPE 262


>gi|110832843 TBP-associated factor 4 [Homo sapiens]
          Length = 1085

 Score = 51.2 bits (121), Expect = 9e-07
 Identities = 42/117 (35%), Positives = 48/117 (41%), Gaps = 40/117 (34%)

Query: 104 FHGASAPPPPP-------PRLAQPRAGPAPPPPGPPSLRRAPINQPRRCQSSGGSPRRCH 156
           F GA+APP P        P  A P A P PPPP P +L R P           G P    
Sbjct: 243 FVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPP-----------GHP---- 287

Query: 157 CSSVPGAPAPASQLPRPAGEVNKVKYPSAARGPGRSTLGVGCEPAASPAAGGWAGVT 213
                G P  A  +P PA          AA+  G      G  PA +PAAGG AGV+
Sbjct: 288 ----AGPPTAAPAVPPPA----------AAQNGG----SAGAAPAPAPAAGGPAGVS 326



 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 39/120 (32%), Positives = 45/120 (37%), Gaps = 19/120 (15%)

Query: 100 SPTHFHGASAPPPPPPRLAQPRAGPAPPPPGPPSLRR-------APINQPRRCQSSGGSP 152
           +P      +AP PPP   A+P  G  P  PGPPS RR       AP     R    G + 
Sbjct: 77  APAEGAPGAAPEPPPAGRARPGGG-GPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSAG 135

Query: 153 RRCHCSSVPGAPA-PASQLPRPAGEVNKVKYPSAARGPGRSTLGVGCEPAASPAAGGWAG 211
               C+ VP A A  A   P PAG       P+   GP       G  P   P  G   G
Sbjct: 136 ---SCAPVPAAAAVAAGPEPAPAG-------PAKPAGPAALAARAGPGPGPGPGPGPGPG 185



 Score = 42.4 bits (98), Expect = 4e-04
 Identities = 47/141 (33%), Positives = 57/141 (40%), Gaps = 25/141 (17%)

Query: 87  RARLARARSPHSMSPTHFHGASAPPPPPPRLAQPRAGPAPPPPGPPSLRRAPINQPRRCQ 146
           RA  A A   H +S +    A A P  P   A P A P PPP G             R +
Sbjct: 51  RAAAAGALGNHVVSGSPAGAAGAGPAAPAEGA-PGAAPEPPPAG-------------RAR 96

Query: 147 SSGGSPRRCHCSS-----VPGAPAPASQLPRPAGEVNKVKYPSAARGPGRSTLGVGCEPA 201
             GG P+R    S     VP  PAP +   RP  E +     S A  P  + +  G EPA
Sbjct: 97  PGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEGSA---GSCAPVPAAAAVAAGPEPA 153

Query: 202 -ASPAAGGWAGVTSSDSRAVP 221
            A PA    AG  +  +RA P
Sbjct: 154 PAGPAKP--AGPAALAARAGP 172



 Score = 34.7 bits (78), Expect = 0.087
 Identities = 49/171 (28%), Positives = 61/171 (35%), Gaps = 20/171 (11%)

Query: 49  PGPSNARRSFAPFPLENWISYLRGRGSRSERGRECACARARLARARSPHSMSPTHFHGAS 108
           PGP + RR   P       + LR     S     CA   A  A A  P         G +
Sbjct: 105 PGPPSPRRPLVPAGPAPPAAKLRPPPEGS--AGSCAPVPAAAAVAAGPEPAPA----GPA 158

Query: 109 APPPPPPRLAQPRAGPAP-PPPGPPSLRRAPINQPRRCQSSGGSPR--RCHCSSVP---- 161
            P  P    A+   GP P P PGP      P   P   Q+  GS      H ++ P    
Sbjct: 159 KPAGPAALAARAGPGPGPGPGPGPGPGPGKPAG-PGAAQTLNGSAALLNSHHAAAPAVSL 217

Query: 162 --GAPAPASQLPRPAGEVNKVKYP---SAARGPGRSTLGVGCEPA-ASPAA 206
               PA    LP+PA     ++ P    AA  P  +       PA A+PAA
Sbjct: 218 VNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAA 268


>gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo
           sapiens]
          Length = 505

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 37/101 (36%), Positives = 43/101 (42%), Gaps = 7/101 (6%)

Query: 109 APPPPPPRLAQPRAGPAPP----PPGPPSL-RRAPINQPRRCQSSGGSPRRCHCSSVPGA 163
           APPPPPP    P   P PP    PP PP+  R AP   P R  ++   P      SV   
Sbjct: 276 APPPPPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVP 335

Query: 164 PAPASQLPRPAGEVNKVKYPSAARGPGRSTLGVGCEPAASP 204
           P P +++  P         PS    P  S LGVG  P A P
Sbjct: 336 PPPPNRMYPPPPPALPSSAPSGPPPPPPSVLGVG--PVAPP 374



 Score = 39.3 bits (90), Expect = 0.004
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 6/50 (12%)

Query: 108 SAPPPPPPRL------AQPRAGPAPPPPGPPSLRRAPINQPRRCQSSGGS 151
           S PPPPPP +      A P   P PPPPGPP     P +   +  ++ G+
Sbjct: 356 SGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPPPGLPSDGDHQVPTTAGN 405



 Score = 37.0 bits (84), Expect = 0.017
 Identities = 31/89 (34%), Positives = 34/89 (38%), Gaps = 12/89 (13%)

Query: 91  ARARSPHSMSPTHFHGASAPPPPPPRLAQPRAGPAPPPPG---PPSLRRAPINQPRRCQS 147
           AR R      P+    A+ PPPPP R   P     PPPP    PP     P + P     
Sbjct: 304 ARGRGAPPPPPSRAPTAAPPPPPPSR---PSVAVPPPPPNRMYPPPPPALPSSAP----- 355

Query: 148 SGGSPRRCHCSSV-PGAPAPASQLPRPAG 175
           SG  P       V P AP P    P P G
Sbjct: 356 SGPPPPPPSVLGVGPVAPPPPPPPPPPPG 384



 Score = 35.8 bits (81), Expect = 0.039
 Identities = 18/28 (64%), Positives = 18/28 (64%), Gaps = 3/28 (10%)

Query: 106 GASAPPPPPPRLAQPRAGPAPPPPGPPS 133
           G  APPPPPP    P  GP PPPPG PS
Sbjct: 369 GPVAPPPPPP--PPPPPGP-PPPPGLPS 393


>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
           potassium channel 2 [Homo sapiens]
          Length = 889

 Score = 50.1 bits (118), Expect = 2e-06
 Identities = 43/125 (34%), Positives = 50/125 (40%), Gaps = 16/125 (12%)

Query: 100 SPTHFHGASAPPPPPPRLAQPRAGPAPPPPGPPSLRRAPINQPRRCQ------SSGGSPR 153
           SP        PPPPPP   Q +  P PPP  PP    AP   P R +      +  G PR
Sbjct: 13  SPGATPAPGPPPPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHPPRAEALPPEAADEGGPR 72

Query: 154 ---RCHCSSV--PGAPAPASQLP-RPAGEVNKVK---YPSAARGPGRS-TLGVGCEPAAS 203
              R   SS   PG P  AS     P GE  + +    P+   GP R   +   C  AAS
Sbjct: 73  GRLRSRDSSCGRPGTPGAASTAKGSPNGECGRGEPQCSPAGPEGPARGPKVSFSCRGAAS 132

Query: 204 PAAGG 208
             A G
Sbjct: 133 GPAPG 137



 Score = 44.7 bits (104), Expect = 8e-05
 Identities = 37/113 (32%), Positives = 44/113 (38%), Gaps = 14/113 (12%)

Query: 111 PPPPPRLAQPRAGPAPP--PPGPPSLRRAPINQPRRCQSSGGSPRRCHCSSVPGAPAPAS 168
           PPP P  A    GP PP  PPG P+  RAP   P      GG P     + + G   PA 
Sbjct: 761 PPPGPAPAAASPGPPPPASPPGAPASPRAPRTSP-----YGGLP----AAPLAGPALPAR 811

Query: 169 QLPRPAG--EVNKVKYPSAARGPGRSTLGVGCE-PAASPAAGGWAGVTSSDSR 218
           +L R +     ++   P  A GP  ST       P   P     A   S D R
Sbjct: 812 RLSRASRPLSASQPSLPHGAPGPAASTRPASSSTPRLGPTPAARAAAPSPDRR 864



 Score = 38.5 bits (88), Expect = 0.006
 Identities = 44/140 (31%), Positives = 55/140 (39%), Gaps = 16/140 (11%)

Query: 84  ACARARLARARSPHSMSPTHFHGASAPPPPPPRL-----AQPRAGPAPPPPGPPSLRRAP 138
           A    RL R R P   +P     A++P PPPP       A PRA    P  G P+   A 
Sbjct: 751 ALGSPRLVR-RPPPGPAPA----AASPGPPPPASPPGAPASPRAPRTSPYGGLPAAPLAG 805

Query: 139 INQPRRCQSSGGSPRRCHCSSVP-GAPAPASQLPRPAGEVNKVKYPSAARGPGRSTLGVG 197
              P R  S    P      S+P GAP PA+     +    ++    AAR    S     
Sbjct: 806 PALPARRLSRASRPLSASQPSLPHGAPGPAASTRPASSSTPRLGPTPAARAAAPSP---D 862

Query: 198 CEPAASPAAGGWAGVTSSDS 217
              +ASP A G  G+   DS
Sbjct: 863 RRDSASPGAAG--GLDPQDS 880



 Score = 35.4 bits (80), Expect = 0.051
 Identities = 30/100 (30%), Positives = 39/100 (39%), Gaps = 17/100 (17%)

Query: 121 RAGPAPPPPGPPSLRRA--------------PINQPRRCQSSGGSPRRCHCSSVPGAPAP 166
           R G  PPPP PP +  A               + +P     + GSPR       P  PAP
Sbjct: 710 RVGLFPPPPPPPQVTSAIATLQQAAAMSFCPQVARPLVGPLALGSPRLVR--RPPPGPAP 767

Query: 167 ASQLPRPAGEVNKVKYPSAARGPGRSTL-GVGCEPAASPA 205
           A+  P P    +    P++ R P  S   G+   P A PA
Sbjct: 768 AAASPGPPPPASPPGAPASPRAPRTSPYGGLPAAPLAGPA 807


>gi|153792074 proline rich 12 [Homo sapiens]
          Length = 2036

 Score = 48.5 bits (114), Expect = 6e-06
 Identities = 51/175 (29%), Positives = 69/175 (39%), Gaps = 40/175 (22%)

Query: 94   RSPHSMSPTHFHGASAPPP----PPPRLAQPR--------------AGPAPPPPGPPSLR 135
            RS  + +P    G+SAPPP    PPP+   P               A P PP P  PSL 
Sbjct: 1676 RSGQAKNPVSAGGSSAPPPKAPAPPPKPETPEKTTSEKPPEQTPETAMPEPPAPEKPSLL 1735

Query: 136  RAPINQPRRCQ-------------SSGGSPRRCHCSSVPGAPAPASQLPRPAGEVNKVKY 182
            R P+ + +  +             ++ G   R   S   G PA  S+LP+      K + 
Sbjct: 1736 R-PVEKEKEKEKVTRGERPLRGERATSGRQTRPERSLATGQPA-TSRLPKARPTKVKAEP 1793

Query: 183  PSAAR------GPGRSTLGVGCEPAASPAAGGWAGVTSSDSRAVPHTLLPQRPLQ 231
            P   R        G +T G G  P +S  +    G  S D RAVP  LL  R ++
Sbjct: 1794 PPKKRKKWLKEAGGNATAGGG-PPGSSSDSESSPGAPSEDERAVPGRLLKTRAMR 1847



 Score = 45.8 bits (107), Expect = 4e-05
 Identities = 43/138 (31%), Positives = 56/138 (40%), Gaps = 20/138 (14%)

Query: 86  ARARLARARSPHSMSPTHFHGASAPPPPPPRLAQPR-----------AGPAPPPPGPPSL 134
           A +  A A +  S    +    +AP PPPP  A PR           A   PPPP PP+ 
Sbjct: 249 ASSSAAAAAAEQSSPQLYNFSGAAPGPPPPERALPRQDTVIKHYQRPASAQPPPPPPPA- 307

Query: 135 RRAPINQPRRCQSSGGS-PRRCHCSSVPGAPAPASQLPRPAGEVNKVKYPSAARGPGRST 193
                +  +   S GGS P   H +++  +P    +    AGE +K   PS A   G S 
Sbjct: 308 -----HALQHYLSCGGSYPSMGHRANLACSPLGGGEPSPGAGEPSKAG-PSGATA-GASG 360

Query: 194 LGVGCEPAASPAAGGWAG 211
              G E A    AGG  G
Sbjct: 361 RATGPEAAGGGGAGGGGG 378



 Score = 38.9 bits (89), Expect = 0.005
 Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 6/47 (12%)

Query: 96   PHSMSPTHFHGASAPPPPPPRLAQPRAGPAPPPPGPPSLRRAPINQP 142
            P  ++PT     S+PPPPP     P A P+PPPP PP+   AP+  P
Sbjct: 1486 PPLVAPT----PSSPPPPPLPPPPPPAMPSPPPPPPPA--AAPLAAP 1526



 Score = 36.6 bits (83), Expect = 0.023
 Identities = 25/84 (29%), Positives = 30/84 (35%), Gaps = 8/84 (9%)

Query: 90   LARARSPHSMSPTHFHGASAPPPPPPRLAQPRAGPAPPPPGPPSLRRAPINQPRRCQSSG 149
            L  A S  +  P        P PPP    QP+  P PPPP P      P+  P       
Sbjct: 1439 LPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAP------- 1491

Query: 150  GSPRRCHCSSVPGAPAPASQLPRP 173
             +P       +P  P PA   P P
Sbjct: 1492 -TPSSPPPPPLPPPPPPAMPSPPP 1514



 Score = 34.3 bits (77), Expect = 0.11
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 10/43 (23%)

Query: 105  HGASAPPPPPPRLAQPRAGPAPPPPGPPSLRRAPINQPRRCQS 147
            H A+ PPPPPP          PPPP P S  +  +  P  C +
Sbjct: 1035 HQAAPPPPPPP----------PPPPAPASEPKGGLTSPIFCST 1067



 Score = 32.0 bits (71), Expect = 0.56
 Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 9/38 (23%)

Query: 97  HSMSPTHFHGASAPPPPPPRLAQPRAGPAPPPPGPPSL 134
           H + P    GA  PPPPP         P PPPP P  L
Sbjct: 822 HLLEPATRDGAPQPPPPP---------PPPPPPMPLQL 850



 Score = 31.6 bits (70), Expect = 0.73
 Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 1/81 (1%)

Query: 110 PPPPPPRLAQPRAGPAPPPPGPPSLRRAPINQPRRCQSSGGSPRRCHCS-SVPGAPAPAS 168
           P   PP    P   P PP   P        +      +   SP+  + S + PG P P  
Sbjct: 221 PAQTPPYRPGPPDPPPPPRHLPTQFNLLASSSAAAAAAEQSSPQLYNFSGAAPGPPPPER 280

Query: 169 QLPRPAGEVNKVKYPSAARGP 189
            LPR    +   + P++A+ P
Sbjct: 281 ALPRQDTVIKHYQRPASAQPP 301



 Score = 31.6 bits (70), Expect = 0.73
 Identities = 14/36 (38%), Positives = 16/36 (44%)

Query: 96   PHSMSPTHFHGASAPPPPPPRLAQPRAGPAPPPPGP 131
            P  + P       +PPPPPP  A P A P   P  P
Sbjct: 1498 PPPLPPPPPPAMPSPPPPPPPAAAPLAAPPEEPAAP 1533



 Score = 31.6 bits (70), Expect = 0.73
 Identities = 16/30 (53%), Positives = 16/30 (53%), Gaps = 3/30 (10%)

Query: 108  SAPPPPPPR---LAQPRAGPAPPPPGPPSL 134
            S PPPPPP    LA P   PA P P  P L
Sbjct: 1511 SPPPPPPPAAAPLAAPPEEPAAPSPEDPEL 1540



 Score = 30.4 bits (67), Expect = 1.6
 Identities = 30/104 (28%), Positives = 41/104 (39%), Gaps = 11/104 (10%)

Query: 113  PPPRLAQPRAGPAPPPPGPPSLRRAPINQPRRCQSSGGSPRRCHCSSVPGAP--APASQL 170
            PP     P+AG A PPPGPP+        P R  +SG  P        P  P   P++  
Sbjct: 967  PPEDEGDPKAG-AGPPPGPPAYDPYGPYCPGR--ASGAGPETPGLGLDPNKPPELPSTVN 1023

Query: 171  PRPAGEVNKVKYPSAARGPGRSTLGVGCEPAASPAAGGWAGVTS 214
              P G +    + +A   P          P  +PA+    G+TS
Sbjct: 1024 AEPLGLIQSGPHQAAPPPPPPP------PPPPAPASEPKGGLTS 1061



 Score = 30.0 bits (66), Expect = 2.1
 Identities = 34/110 (30%), Positives = 40/110 (36%), Gaps = 19/110 (17%)

Query: 123 GPAPPPPGPPSLRRAPINQPRRCQSSGGSPRRCHCSSVPGAPAPASQLPRPAGEVNKVKY 182
           GP  PP GPP    A       CQS      +     V G P P      PA     +  
Sbjct: 478 GPPQPPSGPPPPGLA------TCQSYSPDQLQGQLYGVQGEPYPG-----PAAHSQGL-- 524

Query: 183 PSAARGPGRSTLGVGCEPAASPAAGGWA-GVTSSDSRAVPHTLLPQRPLQ 231
           P+A+     ST   G  PA S   GGW          A P  ++  RPLQ
Sbjct: 525 PTASPSLSYST---GHSPALSGHGGGWGPSSLGGGGEASPSHII--RPLQ 569



 Score = 28.9 bits (63), Expect = 4.8
 Identities = 36/112 (32%), Positives = 41/112 (36%), Gaps = 26/112 (23%)

Query: 107  ASAPPPPPPRLAQPRAG----PAP------PPPGPPSLRRAPINQPRRCQSSGGSPRRCH 156
            A+A P PPP    P A     P P      PPP PP    AP  QP+        P +  
Sbjct: 1427 AAAVPGPPPLPGLPSANSNGTPEPPLLEEKPPPTPPP---APTPQPQ--PPPPPPPPQPA 1481

Query: 157  CSSVPG--APAPASQLPRPAGEVNKVKYPSAARGPGRSTLGVGCEPAASPAA 206
              S P   AP P+S  P P         PS    P          PAA+P A
Sbjct: 1482 LPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPP---------PPAAAPLA 1524



 Score = 28.5 bits (62), Expect = 6.2
 Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 19/56 (33%)

Query: 106  GASAPPPPPPRLAQPRAGPAPPPPGPPSLRRAPINQPRRCQSSGGSPRRCHCSSVP 161
            G     PPPP          PPPP PP    AP ++P+     GG      CS+ P
Sbjct: 1033 GPHQAAPPPP----------PPPPPPP----APASEPK-----GGLTSPIFCSTKP 1069


>gi|239754512 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 556

 Score = 48.1 bits (113), Expect = 8e-06
 Identities = 46/152 (30%), Positives = 59/152 (38%), Gaps = 17/152 (11%)

Query: 67  ISYLRGRGSRSE------RGRECACARARLARARSPHSMSPT------HFHGASAPP-PP 113
           + YLRG  +R        +G+    A+    R  +P    P       H  G  APP P 
Sbjct: 382 LGYLRGPETRRRGGGVWWKGKAGRLAKRCGERHEAPEQGKPRLPPQAWHDQGRDAPPGPT 441

Query: 114 PPRLAQPRAGPAPPPPGPPSLRRAPINQ--PRRCQSSGGSPRRCHCSSVPGAPAPASQLP 171
           P R   PR  P PPPP PP  RR P ++  P   Q   G+ R     S PG      +  
Sbjct: 442 PARRGLPRPPPPPPPPLPPPPRREPCHRAWPGPAQPL-GNLRPPVQQSAPGGRKCVKE-G 499

Query: 172 RPAGEVNKVKYPSAARGPGRSTLGVGCEPAAS 203
              G   + + P   R  G + LG G  P  S
Sbjct: 500 EATGPSKETRGPKECRQVGEAVLGEGGAPMQS 531


>gi|169167066 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 262

 Score = 48.1 bits (113), Expect = 8e-06
 Identities = 47/134 (35%), Positives = 55/134 (41%), Gaps = 19/134 (14%)

Query: 106 GASAPPPPPPRLAQPRAGPAP--PPPGPPSLRR---------APINQPRRCQSSGGSPR- 153
           G + PPPPPP    PR  P P  PPPGP  LR          AP   PRR  SS    R 
Sbjct: 28  GTTYPPPPPPPPPTPRPPPPPPLPPPGPRLLRACSLLLPTEPAPDLPPRRRSSSRSLARG 87

Query: 154 ---RCHCSSVPGAPAPA-SQLPRPAGEVNKVKYPSAARGPGRSTLGVGCEPAASPAAG-- 207
              +C  ++ P  P PA    PRP         P A   P R++   G   A  P  G  
Sbjct: 88  RITQCQVAASPLVPPPAPPHCPRPLLCFLPAAGP-AGLPPLRTSPCSGVTFAGRPRLGQE 146

Query: 208 GWAGVTSSDSRAVP 221
              GV +   RA+P
Sbjct: 147 SGQGVAARRRRALP 160



 Score = 31.2 bits (69), Expect = 0.96
 Identities = 34/105 (32%), Positives = 41/105 (39%), Gaps = 20/105 (19%)

Query: 106 GASAPPP---PPPRLAQPRAG---PAPPPPGPPSLRRAPINQPRRCQSSGGSPRRCHCSS 159
           G  A PP    PP  A    G   P PPPP PP+ R  P   P      G  PR     S
Sbjct: 8   GGEAGPPMSAQPPSSADTVPGTTYPPPPPPPPPTPRPPP---PPPLPPPG--PRLLRACS 62

Query: 160 VPGAPAPASQLPRPAGEVNKVKYPSAARGPGRSTLGVGCEPAASP 204
           +     PA  LP         +  S++R   R  +   C+ AASP
Sbjct: 63  LLLPTEPAPDLP--------PRRRSSSRSLARGRI-TQCQVAASP 98


>gi|113416187 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 262

 Score = 48.1 bits (113), Expect = 8e-06
 Identities = 47/134 (35%), Positives = 55/134 (41%), Gaps = 19/134 (14%)

Query: 106 GASAPPPPPPRLAQPRAGPAP--PPPGPPSLRR---------APINQPRRCQSSGGSPR- 153
           G + PPPPPP    PR  P P  PPPGP  LR          AP   PRR  SS    R 
Sbjct: 28  GTTYPPPPPPPPPTPRPPPPPPLPPPGPRLLRACSLLLPTEPAPDLPPRRRSSSRSLARG 87

Query: 154 ---RCHCSSVPGAPAPA-SQLPRPAGEVNKVKYPSAARGPGRSTLGVGCEPAASPAAG-- 207
              +C  ++ P  P PA    PRP         P A   P R++   G   A  P  G  
Sbjct: 88  RITQCQVAASPLVPPPAPPHCPRPLLCFLPAAGP-AGLPPLRTSPCSGVTFAGRPRLGQE 146

Query: 208 GWAGVTSSDSRAVP 221
              GV +   RA+P
Sbjct: 147 SGQGVAARRRRALP 160



 Score = 31.2 bits (69), Expect = 0.96
 Identities = 34/105 (32%), Positives = 41/105 (39%), Gaps = 20/105 (19%)

Query: 106 GASAPPP---PPPRLAQPRAG---PAPPPPGPPSLRRAPINQPRRCQSSGGSPRRCHCSS 159
           G  A PP    PP  A    G   P PPPP PP+ R  P   P      G  PR     S
Sbjct: 8   GGEAGPPMSAQPPSSADTVPGTTYPPPPPPPPPTPRPPP---PPPLPPPG--PRLLRACS 62

Query: 160 VPGAPAPASQLPRPAGEVNKVKYPSAARGPGRSTLGVGCEPAASP 204
           +     PA  LP         +  S++R   R  +   C+ AASP
Sbjct: 63  LLLPTEPAPDLP--------PRRRSSSRSLARGRI-TQCQVAASP 98


>gi|113415691 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 262

 Score = 48.1 bits (113), Expect = 8e-06
 Identities = 47/134 (35%), Positives = 55/134 (41%), Gaps = 19/134 (14%)

Query: 106 GASAPPPPPPRLAQPRAGPAP--PPPGPPSLRR---------APINQPRRCQSSGGSPR- 153
           G + PPPPPP    PR  P P  PPPGP  LR          AP   PRR  SS    R 
Sbjct: 28  GTTYPPPPPPPPPTPRPPPPPPLPPPGPRLLRACSLLLPTEPAPDLPPRRRSSSRSLARG 87

Query: 154 ---RCHCSSVPGAPAPA-SQLPRPAGEVNKVKYPSAARGPGRSTLGVGCEPAASPAAG-- 207
              +C  ++ P  P PA    PRP         P A   P R++   G   A  P  G  
Sbjct: 88  RITQCQVAASPLVPPPAPPHCPRPLLCFLPAAGP-AGLPPLRTSPCSGVTFAGRPRLGQE 146

Query: 208 GWAGVTSSDSRAVP 221
              GV +   RA+P
Sbjct: 147 SGQGVAARRRRALP 160



 Score = 31.2 bits (69), Expect = 0.96
 Identities = 34/105 (32%), Positives = 41/105 (39%), Gaps = 20/105 (19%)

Query: 106 GASAPPP---PPPRLAQPRAG---PAPPPPGPPSLRRAPINQPRRCQSSGGSPRRCHCSS 159
           G  A PP    PP  A    G   P PPPP PP+ R  P   P      G  PR     S
Sbjct: 8   GGEAGPPMSAQPPSSADTVPGTTYPPPPPPPPPTPRPPP---PPPLPPPG--PRLLRACS 62

Query: 160 VPGAPAPASQLPRPAGEVNKVKYPSAARGPGRSTLGVGCEPAASP 204
           +     PA  LP         +  S++R   R  +   C+ AASP
Sbjct: 63  LLLPTEPAPDLP--------PRRRSSSRSLARGRI-TQCQVAASP 98


>gi|171543895 ataxin 2 [Homo sapiens]
          Length = 1313

 Score = 48.1 bits (113), Expect = 8e-06
 Identities = 49/160 (30%), Positives = 60/160 (37%), Gaps = 45/160 (28%)

Query: 95  SPHSMSPTHFHGASAPPPPPPRLAQPRAGPAPPPPGPPSLRRAPINQPRRCQSSGGSPRR 154
           SP S  P+ +   S P   PPR A P      PP  PPS    P + P            
Sbjct: 558 SPSSRPPSRYQ--SGPNSLPPRAATPTR----PPSRPPSRPSRPPSHP------------ 599

Query: 155 CHCSSVPGAPAPASQLP-RPAGEVNKVKYPSAARGP-------GRSTLGVGCE------- 199
               S  G+PAP S +P R + E      P A R P       GR ++  G E       
Sbjct: 600 ----SAHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEFVSHNPP 655

Query: 200 ------PAA--SPAAGGWAGVTSSDSRAVPHTLLPQRPLQ 231
                 P A  SP+ G W+ V S   R  P T  P+ P Q
Sbjct: 656 SEAATPPVARTSPSGGTWSSVVSGVPRLSPKTHRPRSPRQ 695



 Score = 32.7 bits (73), Expect = 0.33
 Identities = 39/125 (31%), Positives = 42/125 (33%), Gaps = 32/125 (25%)

Query: 106 GASAPPPPPPRLAQPRAGPAPPP---PGPPSLR----------RAPINQPRRCQSSGGSP 152
           G  A P P P  A P  GP PPP     PPS             A     RR    GG P
Sbjct: 42  GGGAAPGPYPSAAPPPPGPGPPPSRQSSPPSASDCFGSNGNGGGAFRPGSRRLLGLGGPP 101

Query: 153 RRCHC----SSVPGAPAPASQLPRPAGEVNKVKYPSAARGPGRSTLGV-----GC-EPAA 202
           R         + PGAP  A     P G         A   P RS + +     GC  PA 
Sbjct: 102 RPFVVLLLPLASPGAPPAAPTRASPLG---------ARASPPRSGVSLARPAPGCPRPAC 152

Query: 203 SPAAG 207
            P  G
Sbjct: 153 EPVYG 157


>gi|239749073 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 884

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 46/152 (30%), Positives = 59/152 (38%), Gaps = 17/152 (11%)

Query: 67  ISYLRGRGSRSE------RGRECACARARLARARSPHSMSPT------HFHGASAPP-PP 113
           + YLRG  +R        +G+    A+    R  +P    P       H  G  APP P 
Sbjct: 710 LGYLRGPETRRRGGGVWWKGKAGRLAKRCGERHEAPEQGKPRLPPQAWHDQGRDAPPGPT 769

Query: 114 PPRLAQPRAGPAPPPPGPPSLRRAPINQ--PRRCQSSGGSPRRCHCSSVPGAPAPASQLP 171
           P R   PR  P PPPP PP  RR P ++  P   Q   G+ R     S PG      +  
Sbjct: 770 PARRGLPRPPPPPPPPLPPPPRREPCHRAWPGPAQPL-GNLRPPVQQSAPGGRKCVKE-G 827

Query: 172 RPAGEVNKVKYPSAARGPGRSTLGVGCEPAAS 203
              G   + + P   R  G + LG G  P  S
Sbjct: 828 EATGPSKETRGPKECRQVGEAVLGEGEAPMQS 859


>gi|239743099 PREDICTED: hypothetical protein XP_002342754 [Homo
           sapiens]
          Length = 884

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 46/152 (30%), Positives = 59/152 (38%), Gaps = 17/152 (11%)

Query: 67  ISYLRGRGSRSE------RGRECACARARLARARSPHSMSPT------HFHGASAPP-PP 113
           + YLRG  +R        +G+    A+    R  +P    P       H  G  APP P 
Sbjct: 710 LGYLRGPETRRRGGGVWWKGKAGRLAKRCGERHEAPEQGKPRLPPQAWHDQGRDAPPGPT 769

Query: 114 PPRLAQPRAGPAPPPPGPPSLRRAPINQ--PRRCQSSGGSPRRCHCSSVPGAPAPASQLP 171
           P R   PR  P PPPP PP  RR P ++  P   Q   G+ R     S PG      +  
Sbjct: 770 PARRGLPRPPPPPPPPLPPPPRREPCHRAWPGPAQPL-GNLRPPVQQSAPGGRKCVKE-G 827

Query: 172 RPAGEVNKVKYPSAARGPGRSTLGVGCEPAAS 203
              G   + + P   R  G + LG G  P  S
Sbjct: 828 EATGPSKETRGPKECRQVGEAVLGEGEAPMQS 859


>gi|239508751 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 884

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 46/152 (30%), Positives = 59/152 (38%), Gaps = 17/152 (11%)

Query: 67  ISYLRGRGSRSE------RGRECACARARLARARSPHSMSPT------HFHGASAPP-PP 113
           + YLRG  +R        +G+    A+    R  +P    P       H  G  APP P 
Sbjct: 710 LGYLRGPETRRRGGGVWWKGKAGRLAKRCGERHEAPEQGKPRLPPQAWHDQGRDAPPGPT 769

Query: 114 PPRLAQPRAGPAPPPPGPPSLRRAPINQ--PRRCQSSGGSPRRCHCSSVPGAPAPASQLP 171
           P R   PR  P PPPP PP  RR P ++  P   Q   G+ R     S PG      +  
Sbjct: 770 PARRGLPRPPPPPPPPLPPPPRREPCHRAWPGPAQPL-GNLRPPVQQSAPGGRKCVKE-G 827

Query: 172 RPAGEVNKVKYPSAARGPGRSTLGVGCEPAAS 203
              G   + + P   R  G + LG G  P  S
Sbjct: 828 EATGPSKETRGPKECRQVGEAVLGEGEAPMQS 859


>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
           tract binding protein associated) [Homo sapiens]
          Length = 707

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 36/116 (31%), Positives = 46/116 (39%), Gaps = 12/116 (10%)

Query: 107 ASAPPPPPPRL-AQPRAGPAPPPPGPPSLRRAPINQPRRCQSSGGSPRRCHCSSVPGAPA 165
           +SAPP  PP   A P +GP P P  PP++  AP   P     S G P         G P 
Sbjct: 129 SSAPPATPPTSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTT--PPQAGGPPP 186

Query: 166 PASQLPRPAGEVNKVKYPSAARGPGRSTLGVGCEPAASPAAGGWAGVTSSDSRAVP 221
           P + +P P         P   +GPG      G  P   P  GG  G+++      P
Sbjct: 187 PPAAVPGPG--------PGPKQGPGPGGPKGGKMP-GGPKPGGGPGLSTPGGHPKP 233



 Score = 42.4 bits (98), Expect = 4e-04
 Identities = 40/138 (28%), Positives = 49/138 (35%), Gaps = 13/138 (9%)

Query: 90  LARARSPHSMSPTHFHGASAPPPPPPRLAQPRAGP-APPPPGPPSLRRAPINQPRRCQSS 148
           L + R P    P         PPPPP   Q +  P  PPP  PP  +  P  QP + Q  
Sbjct: 40  LNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQPPPHQPPPHPQPHQQQQP 99

Query: 149 GGSPRRCHCSSVPGAPAPA---SQLPRPAGEVNKVKYPSAARGPGRSTLGVGCEPAASPA 205
              P+      V   P PA      P  +        P++   PG    G G  P   PA
Sbjct: 100 PPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGS---GPGPTPTPPPA 156

Query: 206 AGGWAGVTSSDSRAVPHT 223
                 VTS+   A P T
Sbjct: 157 ------VTSAPPGAPPPT 168



 Score = 38.9 bits (89), Expect = 0.005
 Identities = 40/119 (33%), Positives = 48/119 (40%), Gaps = 17/119 (14%)

Query: 93  ARSPHSMSPTHFHGASAPPPPPPRLAQPRAGPAPPPPGPPSLRRAPINQPRRCQSSGGSP 152
           A  P S +P        P PPP   + P   P  PPP PPS    P   P+    +GG P
Sbjct: 134 ATPPTSGAPPGSGPGPTPTPPPAVTSAP---PGAPPPTPPS-SGVPTTPPQ----AGGPP 185

Query: 153 RRCHCSSVPGAPAPASQLPRPAGEVNKVKYPSAAR---GPGRSTLGVGCEPAASPAAGG 208
                ++VPG      Q P P G     K P   +   GPG ST G   +P   P  GG
Sbjct: 186 P--PPAAVPGPGPGPKQGPGPGGPKGG-KMPGGPKPGGGPGLSTPGGHPKP---PHRGG 238



 Score = 36.2 bits (82), Expect = 0.030
 Identities = 37/130 (28%), Positives = 41/130 (31%), Gaps = 29/130 (22%)

Query: 96  PHSMSPTHFHGASAPPPPPPRLAQPRAGP----------------APPPPGPPSLRRAPI 139
           P S  PT    A  PPPPP  +  P  GP                 P P G P L   P 
Sbjct: 170 PSSGVPTTPPQAGGPPPPPAAVPGPGPGPKQGPGPGGPKGGKMPGGPKPGGGPGLS-TPG 228

Query: 140 NQPRRCQSSGGSPR-----------RCHCSSVPGAPAPASQLPRPAGEVNKVKYPSAARG 188
             P+     GG PR           + H    PG P   S+      E  K    S  R 
Sbjct: 229 GHPKPPHRGGGEPRGGRQHHPPYHQQHHQGPPPGGPGGRSEEKISDSEGFKANL-SLLRR 287

Query: 189 PGRSTLGVGC 198
           PG  T    C
Sbjct: 288 PGEKTYTQRC 297


>gi|13273315 homeobox B4 [Homo sapiens]
          Length = 251

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 28/88 (31%), Positives = 35/88 (39%), Gaps = 10/88 (11%)

Query: 80  GRECACARARLARARSPHSMSPTHFHGASAPPPPPPRLAQPRAGPAPPPPGPPSLRRAPI 139
           GR  AC   R A  R P             PPPPPP    P  G +P  P PP       
Sbjct: 55  GRRAACTVQRYAACRDP----------GPPPPPPPPPPPPPPPGLSPRAPAPPPAGALLP 104

Query: 140 NQPRRCQSSGGSPRRCHCSSVPGAPAPA 167
              +RC++   SP    C+  P  P+P+
Sbjct: 105 EPGQRCEAVSSSPPPPPCAQNPLHPSPS 132


>gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 195

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 52/178 (29%), Positives = 61/178 (34%), Gaps = 10/178 (5%)

Query: 32  AGTSLRGSCGRCKGSCVPGPSNARRSFAPFPLENWISYLRGRGSRSERGRECACARARLA 91
           AG  +R   G   G C+PGP+               ++      R    R  A A A+  
Sbjct: 19  AGRRVRVGVGEPGGFCLPGPALVVAGLDGIRPAPAAAHPPAPRERPAAARLSALAAAQ-P 77

Query: 92  RARSPHSMSPTHFHGASAPPPPPPRLAQPRAGPA-PPPPGPPSLRRAPINQPRRCQSSGG 150
           R RSP    P    G     P PP L QPR  PA P  P P  L   P + P R     G
Sbjct: 78  RRRSP---GPQGGGGGDIASPLPPAL-QPRGAPAVPAAPSPGPLPARPSSPPPRPSLPSG 133

Query: 151 SPRRCHCSSVPGAPAPASQLPRPAGEVNKVKYPSAARGPGRSTLGVGCEPAASPAAGG 208
             R     S   AP P    P P G V   +     R   R+    G   A  P   G
Sbjct: 134 PHRPVLPPSALAAPRPPLARPLPQGSVTAREQEQRPRSRRRA----GAPEALGPVHAG 187


>gi|239743620 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 285

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 52/175 (29%), Positives = 61/175 (34%), Gaps = 10/175 (5%)

Query: 32  AGTSLRGSCGRCKGSCVPGPSNARRSFAPFPLENWISYLRGRGSRSERGRECACARARLA 91
           AG  +R   G   G C+PGP+               ++      R    R  A A A+  
Sbjct: 19  AGRRVRVGVGEPGGFCLPGPALVVAGLDGIRPAPAAAHPPAPRERPAAARLSALAAAQ-P 77

Query: 92  RARSPHSMSPTHFHGASAPPPPPPRLAQPRAGPA-PPPPGPPSLRRAPINQPRRCQSSGG 150
           R RSP    P    G     P PP L QPR  PA P  P P  L   P + P R     G
Sbjct: 78  RRRSP---GPQGGGGGDIASPLPPAL-QPRGAPAVPAAPSPGPLPARPSSPPPRPSLPSG 133

Query: 151 SPRRCHCSSVPGAPAPASQLPRPAGEVNKVKYPSAARGPGRSTLGVGCEPAASPA 205
             R     S   AP P    P P G V   +     R   R+    G   A  PA
Sbjct: 134 PHRPVLPPSALAAPRPPLARPLPQGSVTAREQEQRPRSRRRA----GAPEALGPA 184


>gi|238859557 regulatory factor X1 [Homo sapiens]
          Length = 979

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 35/109 (32%), Positives = 51/109 (46%), Gaps = 12/109 (11%)

Query: 108 SAPPPPPPRLAQPRAGPAPPPPGPPSLRRAPINQPRRCQSSGGSPRRCHCSSVPGAPAPA 167
           +APPP  P  A P+A P PPPP PP+   AP  QP +  ++  +P+  + + +    +P 
Sbjct: 11  AAPPPSQPPQAPPQAQPQPPPPPPPA---AP--QPPQPPTAAATPQPQYVTEL---QSPQ 62

Query: 168 SQLPRPAGEVNKVKYPSAARGPGRSTLGVGCEPAASPAAGGWAGVTSSD 216
            Q   P G+   V    A   P + T      P  SPA   +  VT S+
Sbjct: 63  PQAQPPGGQKQYVTELPAVPAPSQPT----GAPTPSPAPQQYIVVTVSE 107



 Score = 35.8 bits (81), Expect = 0.039
 Identities = 27/90 (30%), Positives = 38/90 (42%), Gaps = 16/90 (17%)

Query: 92  RARSPHSMSPTHFHGASAPPPPPPRLAQPRAGPAPPPPGPPSLRRAP-------INQPR- 143
           +A  P S  P     A   PPPPP  A      AP PP PP+    P       +  P+ 
Sbjct: 10  QAAPPPSQPPQAPPQAQPQPPPPPPPA------APQPPQPPTAAATPQPQYVTELQSPQP 63

Query: 144 RCQSSGGSPRRCHCSSVPGAPAPASQLPRP 173
           + Q  GG  ++ + + +P  PAP+     P
Sbjct: 64  QAQPPGG--QKQYVTELPAVPAPSQPTGAP 91


>gi|194578898 hypothetical protein LOC100170841 [Homo sapiens]
          Length = 379

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 54/168 (32%), Positives = 66/168 (39%), Gaps = 39/168 (23%)

Query: 96  PHSM-SPTHFHGASAPPPPPPRLAQPRAGPAPPPPGPPSLRRAPINQPRRCQSSGGSPRR 154
           PH   S T F  ASAPP P P L +P+ GPA  PP  PS R  P + P    +    P  
Sbjct: 144 PHPRESTTSF--ASAPPRPAPGL-EPQRGPAASPPQEPSSR--PPSPPAGLSTEPAGPGT 198

Query: 155 CHCSSVPGAPAPASQLPRPAGEVNKVKYPSAARGPGRSTLGVGCEPAASPAAGGWAGVTS 214
                +PG PA     P PA        P A              PAASP+       T+
Sbjct: 199 APRPFLPGQPAEVDGNPPPAA-------PEA--------------PAASPS-------TA 230

Query: 215 SDSRAVPHTLLPQRPLQLFVARSCSWRFSPESQARSEHWAPRLRCGPE 262
           S + A P   L Q      + RS  W ++      +    P LR GPE
Sbjct: 231 SPAPAAPGD-LRQEHFDRLIRRSKLWCYAKGFALDT----PSLRRGPE 273



 Score = 35.0 bits (79), Expect = 0.066
 Identities = 53/220 (24%), Positives = 68/220 (30%), Gaps = 66/220 (30%)

Query: 9   PGLPPNAAR---------RAGENEDRSAVSDFAGTSLRGSCGRCKGSCVPGPSNARRSFA 59
           PG+P  AA          R GE E+        G       GRC     P P  +  SFA
Sbjct: 97  PGVPNTAAGEDADVAACPRRGEEEEGGGGFPHFGVRSCAPPGRCPAP--PHPRESTTSFA 154

Query: 60  PFPLENWISYLRGRGSRSERGRECACARARLARARSPHSMSPTHFHGASAPP-------- 111
             P           G   +RG   +  +   +R  SP +   T   G    P        
Sbjct: 155 SAPPRP------APGLEPQRGPAASPPQEPSSRPPSPPAGLSTEPAGPGTAPRPFLPGQP 208

Query: 112 ------PPP-----PRLAQPRAGPAPPPPGP--------------------------PSL 134
                 PPP     P  +   A PAP  PG                           PSL
Sbjct: 209 AEVDGNPPPAAPEAPAASPSTASPAPAAPGDLRQEHFDRLIRRSKLWCYAKGFALDTPSL 268

Query: 135 RRAPINQPRRCQSSGGSPRRCHCSSVPGAPAPASQLPRPA 174
           RR P   P +  + G + +R     +P  P   +Q  RPA
Sbjct: 269 RRGPERPPAKGPARGAAKKR----RLPAPPPRTAQPRRPA 304


>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
          Length = 502

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 37/105 (35%), Positives = 41/105 (39%), Gaps = 24/105 (22%)

Query: 109 APPPPPPRLAQP--RAGPAPPPPGPPSLRRAPINQPRRCQSSGGSPRRCHCSSVPGAPAP 166
           APPPP PR   P  R GP PPPP P + R  P+  P     +GG P           P P
Sbjct: 350 APPPPTPRGPPPPGRGGPPPPPP-PATGRSGPLPPPP--PGAGGPP----------MPPP 396

Query: 167 ASQLPRPAGEVNKVKYPSAARGPGRSTLGVGCEPAASPAAGGWAG 211
               P P         PS+  GP    L     PA   A GG  G
Sbjct: 397 PPPPPPP---------PSSGNGPAPPPLPPALVPAGGLAPGGGRG 432



 Score = 41.2 bits (95), Expect = 0.001
 Identities = 28/74 (37%), Positives = 32/74 (43%), Gaps = 10/74 (13%)

Query: 106 GASAPPPPPPRLAQPRAGPAPPPP----GPPSLRRAPINQPRRCQSSGGSPRRCHCSSVP 161
           G   PPPPPP  A  R+GP PPPP    GPP     P   P     +G +P       +P
Sbjct: 363 GRGGPPPPPPP-ATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAP-----PPLP 416

Query: 162 GAPAPASQLPRPAG 175
            A  PA  L    G
Sbjct: 417 PALVPAGGLAPGGG 430



 Score = 38.9 bits (89), Expect = 0.005
 Identities = 19/51 (37%), Positives = 19/51 (37%)

Query: 92  RARSPHSMSPTHFHGASAPPPPPPRLAQPRAGPAPPPPGPPSLRRAPINQP 142
           R   P    P        PPPPP     P   P PPPP PPS    P   P
Sbjct: 364 RGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPPP 414



 Score = 36.2 bits (82), Expect = 0.030
 Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 21/80 (26%)

Query: 106 GASAPPPPPPRLAQPRAGPAP-PPPGPPSL-----------RRAPINQPRRCQSSGGSPR 153
           G   PPPPPP    P +G  P PPP PP+L           R A ++Q R         +
Sbjct: 390 GPPMPPPPPPPPPPPSSGNGPAPPPLPPALVPAGGLAPGGGRGALLDQIR---------Q 440

Query: 154 RCHCSSVPGAPAPASQLPRP 173
               +  PGAP  ++  P P
Sbjct: 441 GIQLNKTPGAPESSALQPPP 460



 Score = 28.9 bits (63), Expect = 4.8
 Identities = 30/91 (32%), Positives = 31/91 (34%), Gaps = 12/91 (13%)

Query: 121 RAGPAPPPPGPPSLRRAPINQPRRCQSSGGSPRRCHCSSVP---GAPAPASQLPRPAGEV 177
           R  P PPPP PPS  R     PR     G   R      VP     P P  + P P G  
Sbjct: 309 RQEPLPPPP-PPS--RGGNQLPRPPIVGGNKGRSGPLPPVPLGIAPPPPTPRGPPPPGRG 365

Query: 178 NKVKYPSAARGPGRSTLGVGCEPAASPAAGG 208
                P  A G        G  P   P AGG
Sbjct: 366 GPPPPPPPATGRS------GPLPPPPPGAGG 390


>gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo
           sapiens]
          Length = 202

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 55/179 (30%), Positives = 67/179 (37%), Gaps = 32/179 (17%)

Query: 55  RRSFAPFPLENWISYLRGR------GSRSERG----------RECACARARLARARSPHS 98
           RR+  P   EN  S  RG+      G  +E G          R C   R RL  A    S
Sbjct: 5   RRNQLPGDPENCWSLARGKSGSVFVGDGTEPGFGAQPGSGGDRVCPGGRPRLLMAVKRRS 64

Query: 99  MS-PTHFHGASAPPPPPPRLAQPRAGPAPPPPGPPSLRRAPINQPRRCQSSGGSPRRCHC 157
               +H            R    R  P  P   P  L R P   PRR + + G P     
Sbjct: 65  GGFKSHSATERVERSRLARACYARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHP----- 119

Query: 158 SSVPGAPAPASQL----PRPAGEVNK--VKYPSAARGPGRSTLGVGCEPAASPAAGGWA 210
            S P A APA+      PRP  +++     +    RGPGRS    G   AA+P AGG A
Sbjct: 120 -SAPPAAAPAAPAQPPAPRPESQLSDRPQSWEQKPRGPGRSARSAG---AAAPPAGGLA 174


>gi|239753114 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 322

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 53/190 (27%), Positives = 71/190 (37%), Gaps = 44/190 (23%)

Query: 50  GPSNARRSFA---------PFPLENWISYLRGRGSRSERGRECACARARLARARSPHSMS 100
           GP+ A R  A         P PL  W +     GS +    +   + A  AR R+  S++
Sbjct: 110 GPAGAARGAASLALPTRGVPLPLSRWRT-----GSLTYVAGDLGASGAVSARVRARASLA 164

Query: 101 -----PTHFHGASAPPPPPPRLAQPRAGPAPPPPGPPSLRRAPINQPRRCQSSGGSPRRC 155
                  H H ++ PPPPPP  A P  G A   P  P+  RAP+  P   QS+   P   
Sbjct: 165 LGLPIQCHRHISTEPPPPPP--AAPATGSAQSRP-RPAPARAPLIAPGAHQSAPPLP--- 218

Query: 156 HCSSVPGAPAPASQLPRPAGEVNKVKYPSAARGPGRS----------------TLGVGCE 199
               +   PAP     R  G    +  PS  RG  +S                 L  GCE
Sbjct: 219 ---VLGRLPAPLPLQLRAGGASTGLAAPSPGRGGKQSEISFRGPGPRAQHPGCRLRAGCE 275

Query: 200 PAASPAAGGW 209
           P+      G+
Sbjct: 276 PSCGRLGRGY 285



 Score = 28.9 bits (63), Expect = 4.8
 Identities = 29/104 (27%), Positives = 41/104 (39%), Gaps = 18/104 (17%)

Query: 135 RRAPINQPRRCQSSGGSPRRCHCSSVP--GAPAPASQ-----LPRPAGEVNKVKYPSAAR 187
           RR+PI+  R C    G+ R     ++P  G P P S+     L   AG++       +AR
Sbjct: 98  RRSPISPARACGGPAGAARGAASLALPTRGVPLPLSRWRTGSLTYVAGDLG-ASGAVSAR 156

Query: 188 GPGRSTLGVG----------CEPAASPAAGGWAGVTSSDSRAVP 221
              R++L +G           EP   P A    G   S  R  P
Sbjct: 157 VRARASLALGLPIQCHRHISTEPPPPPPAAPATGSAQSRPRPAP 200


>gi|169206459 PREDICTED: hypothetical protein LOC100132234 [Homo
           sapiens]
          Length = 202

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 55/179 (30%), Positives = 67/179 (37%), Gaps = 32/179 (17%)

Query: 55  RRSFAPFPLENWISYLRGR------GSRSERG----------RECACARARLARARSPHS 98
           RR+  P   EN  S  RG+      G  +E G          R C   R RL  A    S
Sbjct: 5   RRNQLPGDPENCWSLARGKSGSVFVGDGTEPGFGAQPGSGGDRVCPGGRPRLLMAVKRRS 64

Query: 99  MS-PTHFHGASAPPPPPPRLAQPRAGPAPPPPGPPSLRRAPINQPRRCQSSGGSPRRCHC 157
               +H            R    R  P  P   P  L R P   PRR + + G P     
Sbjct: 65  GGFKSHSATERVERSRLARACYARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHP----- 119

Query: 158 SSVPGAPAPASQL----PRPAGEVNK--VKYPSAARGPGRSTLGVGCEPAASPAAGGWA 210
            S P A APA+      PRP  +++     +    RGPGRS    G   AA+P AGG A
Sbjct: 120 -SAPPAAAPAAPAQPPAPRPESQLSDRPQSWEQKPRGPGRSARSAG---AAAPPAGGLA 174


>gi|169205915 PREDICTED: hypothetical protein LOC100132234 [Homo
           sapiens]
          Length = 202

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 55/179 (30%), Positives = 67/179 (37%), Gaps = 32/179 (17%)

Query: 55  RRSFAPFPLENWISYLRGR------GSRSERG----------RECACARARLARARSPHS 98
           RR+  P   EN  S  RG+      G  +E G          R C   R RL  A    S
Sbjct: 5   RRNQLPGDPENCWSLARGKSGSVFVGDGTEPGFGAQPGSGGDRVCPGGRPRLLMAVKRRS 64

Query: 99  MS-PTHFHGASAPPPPPPRLAQPRAGPAPPPPGPPSLRRAPINQPRRCQSSGGSPRRCHC 157
               +H            R    R  P  P   P  L R P   PRR + + G P     
Sbjct: 65  GGFKSHSATERVERSRLARACYARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHP----- 119

Query: 158 SSVPGAPAPASQL----PRPAGEVNK--VKYPSAARGPGRSTLGVGCEPAASPAAGGWA 210
            S P A APA+      PRP  +++     +    RGPGRS    G   AA+P AGG A
Sbjct: 120 -SAPPAAAPAAPAQPPAPRPESQLSDRPQSWEQRPRGPGRSARSAG---AAAPPAGGLA 174


>gi|163965366 nascent polypeptide-associated complex alpha subunit
            isoform a [Homo sapiens]
          Length = 2078

 Score = 46.2 bits (108), Expect = 3e-05
 Identities = 39/127 (30%), Positives = 51/127 (40%), Gaps = 7/127 (5%)

Query: 107  ASAPPPPP--PRLAQPRAGPAPPPPGPPSLRRAPINQPRRCQSSGGSPRRCHCSSVPGAP 164
            A+ PP P   P    P+  P PP   PPS + +P   P        +P      S  G+P
Sbjct: 990  AATPPSPKGGPATPSPKGAPTPPAVTPPSPKGSPAATP--FPKGASTPPAATPPSPKGSP 1047

Query: 165  APASQLPRPAGEVNKVKYPSAARGPGRSTL-GVGCEPAASPAAGGWAGVTSSDSRA-VPH 222
            A A+ LP+ A        PS   GP   +L G    PAA+P +      T S   A +P 
Sbjct: 1048 A-ATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPP 1106

Query: 223  TLLPQRP 229
               P  P
Sbjct: 1107 AATPPSP 1113



 Score = 40.8 bits (94), Expect = 0.001
 Identities = 38/132 (28%), Positives = 49/132 (37%), Gaps = 12/132 (9%)

Query: 107  ASAPPPPP--PRLAQPRAGPAPPPPGPPSLRRAPINQPRRCQSSGG-----SPRRCHCSS 159
            A+ PP P   P    P+  P PP   PPSL+      P +   +       SP+    +S
Sbjct: 1245 AATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATS 1304

Query: 160  VP-GAPA-PASQLPRPAGEVNKVKYPSAARGPG---RSTLGVGCEPAASPAAGGWAGVTS 214
             P GAP  PA+  P P G         A   P     S  G    PA +P++ G     S
Sbjct: 1305 PPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPS 1364

Query: 215  SDSRAVPHTLLP 226
            S     P    P
Sbjct: 1365 SKEGPTPPAATP 1376



 Score = 40.0 bits (92), Expect = 0.002
 Identities = 45/140 (32%), Positives = 49/140 (35%), Gaps = 30/140 (21%)

Query: 86   ARARLARARSPHSMSPTHFHGASAPPPPPPRLAQPRAGPAPP------------PPGP-- 131
            ARA  A    P S SP       AP PP      P+ GPA P            PP P  
Sbjct: 921  ARATPAPKGIPASPSPK-----GAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKG 975

Query: 132  ----PSLRRAPINQPRRCQSSGGSPRRCHCSSVPGAPA-PASQLPRPAGEVNKVKYPSAA 186
                PS + AP        S  G P      S  GAP  PA   P P G      +P  A
Sbjct: 976  GPATPSPKGAPTPPAATPPSPKGGPA---TPSPKGAPTPPAVTPPSPKGSPAATPFPKGA 1032

Query: 187  RGPGRSTLGVGCEPAASPAA 206
              P  +T      P  SPAA
Sbjct: 1033 STPPAAT---PPSPKGSPAA 1049



 Score = 40.0 bits (92), Expect = 0.002
 Identities = 36/122 (29%), Positives = 51/122 (41%), Gaps = 15/122 (12%)

Query: 93   ARSPHSMSPTHFHGASAPPPPPPRLAQPRAGPAPPPPGPPSLRRAPINQPRRCQSSGGSP 152
            A +P +++P    G+ A  P P   + P A   P P G P+    P   P    ++  SP
Sbjct: 1008 APTPPAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSP 1067

Query: 153  RRCHCS-SVPGAPAPASQLPRPAGEVNKVKYPSAARGPGR-STLGVGCEPAASPAA--GG 208
            +    + S+ GAP P +  P           PS   GP   S  G    PAA+P +  GG
Sbjct: 1068 KGGPATPSLKGAPTPPAATP-----------PSPKGGPATPSPKGAPMPPAATPPSPKGG 1116

Query: 209  WA 210
             A
Sbjct: 1117 LA 1118



 Score = 38.5 bits (88), Expect = 0.006
 Identities = 39/115 (33%), Positives = 45/115 (39%), Gaps = 10/115 (8%)

Query: 93   ARSPHSMSPTHFHGASAPPPPP--PRLAQPRAGPAPPPPGPPSLRRAPINQPRRCQSSGG 150
            A SP   +PT    A+ PP P   P    P+  P PP   PPS +  P   P    SS G
Sbjct: 1302 ATSPPKGAPTP--PAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTP-TLPATTPSSKG 1358

Query: 151  SPRRCHCSSVPGAPAPASQLPRPAGEVNKVKYPSAARGPG-RSTLGVGCEPAASP 204
             P     SS  G   PA+      G    +  PS  RGP   S  G    PA  P
Sbjct: 1359 GPTT--PSSKEGPTPPAATPSHKGGPA--MTPPSPKRGPAIPSPKGDPTSPAVIP 1409



 Score = 38.1 bits (87), Expect = 0.008
 Identities = 38/135 (28%), Positives = 51/135 (37%), Gaps = 26/135 (19%)

Query: 93   ARSPHSMSPTHFHGASAPPPPP---PRLAQPRAGPAPPPPGPPSLRRAPINQPRRCQSSG 149
            A  PH  +P   + A   PP P   P  + P+  P PP   PPS + +P   P +     
Sbjct: 1279 ATPPHKGAP---NPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPPPK----- 1330

Query: 150  GSPRRCHCSSVPGAPA-PASQLPRPAGEVN-KVKYPSAARGPGRSTLGVG-CEPAASPAA 206
                        GAP  PA   P P G        PS+  GP   +   G   PAA+P+ 
Sbjct: 1331 ------------GAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSH 1378

Query: 207  GGWAGVTSSDSRAVP 221
             G   +T    +  P
Sbjct: 1379 KGGPAMTPPSPKRGP 1393



 Score = 37.4 bits (85), Expect = 0.013
 Identities = 41/157 (26%), Positives = 60/157 (38%), Gaps = 21/157 (13%)

Query: 93   ARSPHSMSPTHFHGASAPPPPPP-----RLAQPRAGPAPPPPGPPSLRRAPINQPRRCQS 147
            A +P +++P    G + PP   P      L  P+ GPA P P          + P++ ++
Sbjct: 864  APTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARA 923

Query: 148  SGGSPRRCHCSSVP-GAP------------APASQLPRPAGEVNKVKYPSAARGPGR-ST 193
            +  +P+    S  P GAP             PA+  P+ A        PS   GP   S 
Sbjct: 924  T-PAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSP 982

Query: 194  LGVGCEPAASPAAGGWAGVTSSDSRA-VPHTLLPQRP 229
             G    PAA+P +      T S   A  P  + P  P
Sbjct: 983  KGAPTPPAATPPSPKGGPATPSPKGAPTPPAVTPPSP 1019



 Score = 35.0 bits (79), Expect = 0.066
 Identities = 24/99 (24%), Positives = 34/99 (34%), Gaps = 16/99 (16%)

Query: 93   ARSPHSMSPTHFHGASAPP----------------PPPPRLAQPRAGPAPPPPGPPSLRR 136
            A SP +++P+ + GA +P                 P PP +  P     P  P P     
Sbjct: 1579 ASSPPAVTPSTYKGAPSPKELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPATPAPKGTPT 1638

Query: 137  APINQPRRCQSSGGSPRRCHCSSVPGAPAPASQLPRPAG 175
            +P   P   + S  SP    C      P  +  LP   G
Sbjct: 1639 SPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKG 1677



 Score = 32.0 bits (71), Expect = 0.56
 Identities = 34/128 (26%), Positives = 49/128 (38%), Gaps = 16/128 (12%)

Query: 107  ASAPPPPP--PRLAQPRAGPAPPPPGPPSLRRAPINQPRRCQSSGGSPRRCHCSSVPGAP 164
            A+ PP P   P    P+  P PP   PPS +      P +     G+P     ++ P +P
Sbjct: 1084 AATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHK-----GAPTT--PAATPPSP 1136

Query: 165  APASQLPRPAG-EVNKVKYPSAARGPGRST---LGVGCEPAASPAA--GGWAGVTSSDSR 218
                  P P G        P + +G G +T    G    PAA+P +  GG A  +   + 
Sbjct: 1137 KGGLATPPPKGAPTTPAATPPSPKG-GLATPPPKGAPTTPAATPPSPKGGLATPSPKGAP 1195

Query: 219  AVPHTLLP 226
              P    P
Sbjct: 1196 TTPAATPP 1203



 Score = 29.6 bits (65), Expect = 2.8
 Identities = 32/135 (23%), Positives = 45/135 (33%), Gaps = 22/135 (16%)

Query: 95   SPHSMSPTHFHGASAPPP--------------------PPPRLAQPRAGPAPPPPGPPSL 134
            +P +  P+   G + PPP                    PPP+ A       PP P     
Sbjct: 1128 TPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLA 1187

Query: 135  RRAPINQPRRCQSSGGSPRRCHCSSVP-GAP-APASQLPRPAGEVNKVKYPSAARGPGRS 192
              +P   P    ++  SP+    +  P GAP  PA+  P P G +       A   P  +
Sbjct: 1188 TPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAAT 1247

Query: 193  TLGVGCEPAASPAAG 207
                   PA  P  G
Sbjct: 1248 PPSPKGGPATPPPKG 1262


>gi|56549696 E1A binding protein p400 [Homo sapiens]
          Length = 3122

 Score = 45.8 bits (107), Expect = 4e-05
 Identities = 45/165 (27%), Positives = 64/165 (38%), Gaps = 12/165 (7%)

Query: 76   RSERGRECACARARLARARSPHSMSPTHFHGASAPPP--PPPRLAQPRAGPAPPPPGPPS 133
            R+ER  +   A A   +A+ P    P        PPP  PPP L QP+A  + PP GPP+
Sbjct: 2481 RAERIAKEKKALADQQKAQQPAVAQPPPPQPQPPPPPQQPPPPLPQPQAAGSQPPAGPPA 2540

Query: 134  LRRAPINQPRRCQSSGGSPRRCHCSSVPGAPA---------PASQLPRPAGEVNKVKYPS 184
            ++  P  QP+       +P +   +   G  A           +    P G V+     +
Sbjct: 2541 VQPQPQPQPQTQPQPVQAPAKAQPAITTGGSAAVLAGTIKTSVTGTSMPTGAVSGNVIVN 2600

Query: 185  AARGPGRSTLGVGCEPAASPAAGGWAGVTSSDSRA-VPHTLLPQR 228
               G   +T     +  ASP A G        + A V HT  P R
Sbjct: 2601 TIAGVPAATFQSINKRLASPVAPGALTTPGGSAPAQVVHTQPPPR 2645



 Score = 33.1 bits (74), Expect = 0.25
 Identities = 24/80 (30%), Positives = 32/80 (40%), Gaps = 6/80 (7%)

Query: 96  PHSMSPTHFHGASAPPPPPPRLAQPRAGPAPPP---PGPPSLRRAPINQPRRCQSSGGSP 152
           P  ++ T      APP P P      +  AP     PGP   R +P+N+P    +   SP
Sbjct: 641 PQMVASTRLPVDPAPPCPRPLPTSSTSSLAPVSGSGPGPSPARSSPVNRPSSATNKALSP 700

Query: 153 RRCHCSSVPGAPAPASQLPR 172
                S  PG  A A   P+
Sbjct: 701 ---VTSRTPGVVASAPTKPQ 717



 Score = 32.0 bits (71), Expect = 0.56
 Identities = 38/147 (25%), Positives = 50/147 (34%), Gaps = 19/147 (12%)

Query: 114 PPRLAQPRAGPAPPPPGPPSLRRAPINQPRRCQSSGGSPRRCHCSSVPGAPAPASQLPRP 173
           P  +A  R    P PP P  L  +  +       SG  P          +PA +S + RP
Sbjct: 641 PQMVASTRLPVDPAPPCPRPLPTSSTSSLAPVSGSGPGP----------SPARSSPVNRP 690

Query: 174 AGEVNKVKYPSAARGPGRSTLGVGCEPAASPAAGGWAGVTSSDSRAVPHTLLP----QRP 229
           +   NK   P  +R PG   +        SPA    +   SS         L     QR 
Sbjct: 691 SSATNKALSPVTSRTPG--VVASAPTKPQSPAQNATSSQDSSQDTLTEQITLENQVHQRI 748

Query: 230 LQLFVARSCSWRFSP---ESQARSEHW 253
            +L  A   S R  P   E+     HW
Sbjct: 749 AELRKAGLWSQRRLPKLQEAPRPKSHW 775


>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
           sapiens]
          Length = 483

 Score = 45.8 bits (107), Expect = 4e-05
 Identities = 39/127 (30%), Positives = 51/127 (40%), Gaps = 12/127 (9%)

Query: 109 APPPPPPRLAQ--PRAG-PAPPPPGPPSLRRAPINQPRRCQSSGGSPRRCHCSSVPGAPA 165
           APPPP P  A   PRA  PAPP PG  S    P   P +  S    P++    ++P  PA
Sbjct: 291 APPPPLPPYASCSPRASLPAPPLPGVNSSSETPPPLPPKSPSFQAPPQKAGAQALPAPPA 350

Query: 166 PASQLPRPAGEVNKVKYPSAARGPGRSTLGVGCEPAASPAAGGWAGVTSSDSRAVPHTLL 225
           P    P     + K ++     G G+        P A PA      ++S   +A   T  
Sbjct: 351 PPGSQP----FLQKKRHGRPGAGGGKLN-----PPPAPPARSPTTELSSKSQQATAWTPT 401

Query: 226 PQRPLQL 232
            Q   QL
Sbjct: 402 QQPGGQL 408



 Score = 38.5 bits (88), Expect = 0.006
 Identities = 28/86 (32%), Positives = 35/86 (40%), Gaps = 9/86 (10%)

Query: 95  SPHSMSPTHFHGASAPPPPPPRL--AQPRAGPAPPPPGPPSLR-----RAPINQPRRCQS 147
           SP   + +  HGA+   PP P +    P   P PPPP PP L      + P+  P    +
Sbjct: 149 SPRLGNTSEAHGAARTAPPRPNVPAPPPPTPPPPPPPLPPPLPSSSPIKTPLVSPPGPLT 208

Query: 148 SGGSPRRCHCSSVPGAPAPASQLPRP 173
            G  P       VP AP P    P P
Sbjct: 209 KGNLP--VVAPPVPCAPPPPPPPPPP 232



 Score = 37.0 bits (84), Expect = 0.017
 Identities = 39/130 (30%), Positives = 43/130 (33%), Gaps = 29/130 (22%)

Query: 109 APPPPPPRLAQPRAGPAPPPPGPPSLRRAPINQPRRCQSSGGSPRRCHCSSVPGAPAPAS 168
           APPPPPP          PPPP PP L       P    S      +     +P  P P  
Sbjct: 222 APPPPPP----------PPPPTPPPL------PPASVLSDKAVKPQLAPLHLPPIPPPLP 265

Query: 169 QLP---------RPAGEVNKVKYPSAARGPGRSTLGVGCEPAASPAAGGWAGVTSSDSRA 219
            LP          PA      + P A   P        C P AS  A    GV SS    
Sbjct: 266 LLPPCGYPGLKAEPASPAQDAQEPPAP--PPPLPPYASCSPRASLPAPPLPGVNSSSE-- 321

Query: 220 VPHTLLPQRP 229
            P  L P+ P
Sbjct: 322 TPPPLPPKSP 331



 Score = 35.0 bits (79), Expect = 0.066
 Identities = 20/38 (52%), Positives = 20/38 (52%), Gaps = 10/38 (26%)

Query: 110 PPPPPPRLAQP----RAGPAPPPPGPP------SLRRA 137
           PPPPPP L  P     A P PPP  PP      SLRRA
Sbjct: 4   PPPPPPPLPPPPPPLGAPPPPPPSAPPVSTDTSSLRRA 41



 Score = 32.3 bits (72), Expect = 0.43
 Identities = 24/86 (27%), Positives = 34/86 (39%), Gaps = 9/86 (10%)

Query: 92  RARSPHSMSPTHFHGASAPPPPPPRLAQPRAGP-------APPPPGPPSLRRAPINQPRR 144
           RA  P    P     +  PPP PP+    +A P        P PP PP  +  P  Q +R
Sbjct: 305 RASLPAPPLPGVNSSSETPPPLPPKSPSFQAPPQKAGAQALPAPPAPPGSQ--PFLQKKR 362

Query: 145 CQSSGGSPRRCHCSSVPGAPAPASQL 170
               G    + +    P A +P ++L
Sbjct: 363 HGRPGAGGGKLNPPPAPPARSPTTEL 388


>gi|113416879 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 175

 Score = 45.4 bits (106), Expect = 5e-05
 Identities = 40/139 (28%), Positives = 55/139 (39%), Gaps = 10/139 (7%)

Query: 71  RGRGSRSERGRECACARARLARARSPHSMSPTHFHGASAPPPPPPRLAQPRAGPAPPPPG 130
           +  G R  R R    ++  LAR R+P    P    G   PPPP P   +P   P    P 
Sbjct: 4   KASGRRQGRARGRPHSQVSLAR-RAPLMFGP----GLRDPPPPRPAPPRPGEEPGNRHPP 58

Query: 131 PPSLRRAPINQPRRCQSSGGSPRRCHCSSVPGAP-----APASQLPRPAGEVNKVKYPSA 185
           PP+ R  P +   RC S      R   ++ PG       A A++  R      ++   +A
Sbjct: 59  PPAARTHPGSCRARCPSPAAGGLRGPWTAAPGRQRADEGAAAARPERQRVWARRLPGSAA 118

Query: 186 ARGPGRSTLGVGCEPAASP 204
           A  PGR  L +   P   P
Sbjct: 119 APAPGRDALRLPPPPPPPP 137



 Score = 38.5 bits (88), Expect = 0.006
 Identities = 45/150 (30%), Positives = 52/150 (34%), Gaps = 20/150 (13%)

Query: 1   MLSPLARAPGLPPNAARRAGENEDRSAVSDFAGTSLRGSC-GRCKGSCVPGPSNARRSFA 59
           M  P  R P  P  A  R GE          A  +  GSC  RC     P     R  + 
Sbjct: 30  MFGPGLRDPPPPRPAPPRPGEEPGNRHPPPPAARTHPGSCRARCPS---PAAGGLRGPWT 86

Query: 60  PFPLENWISYLRGRGSRSERGRECACARARLARARSPHSMS-PTHFHGA-SAPPPPPPRL 117
             P         GR    E        R R+   R P S + P     A   PPPPPP  
Sbjct: 87  AAP---------GRQRADEGAAAARPERQRVWARRLPGSAAAPAPGRDALRLPPPPPPPP 137

Query: 118 AQPRAGPA-----PPPPGPPSLRRAPINQP 142
            +PR  PA     P    PPS   AP ++P
Sbjct: 138 ERPRLPPAGLAGGPADSAPPSPAPAPRSRP 167


>gi|47132519 Ras association and pleckstrin homology domains 1 isoform
            1 [Homo sapiens]
          Length = 1250

 Score = 45.4 bits (106), Expect = 5e-05
 Identities = 31/99 (31%), Positives = 40/99 (40%), Gaps = 7/99 (7%)

Query: 109  APPPPPPRLAQPRAGPAPPPPGPPSLRRAPINQPRRCQSSGGSPRRCHCSSVPGAPAPAS 168
            APPPPPP    P A P P   G P  + +  + P   +      R     S  GA  P  
Sbjct: 937  APPPPPP----PTASPTPDKSGSPGKKTSKTSSPGGKKPPPTPQRNSSIKSSSGAEHPEP 992

Query: 169  QLPRPAGEVNKVKYPSAARGPGRSTLGVGCEPAASPAAG 207
            + P     V+K   P+ +  P + TL     PAA P  G
Sbjct: 993  KRPSVDSLVSKFTPPAESGSPSKETLP---PPAAPPKPG 1028



 Score = 34.7 bits (78), Expect = 0.087
 Identities = 15/25 (60%), Positives = 15/25 (60%), Gaps = 4/25 (16%)

Query: 110 PPPPPPRLAQPRAGPAPPPPGPPSL 134
           PPPPPP    P   P PPPP PP L
Sbjct: 629 PPPPPP----PPPPPPPPPPPPPPL 649



 Score = 34.3 bits (77), Expect = 0.11
 Identities = 17/43 (39%), Positives = 20/43 (46%)

Query: 96  PHSMSPTHFHGASAPPPPPPRLAQPRAGPAPPPPGPPSLRRAP 138
           P  ++P      S P PPPP    P   P PPPP P   + AP
Sbjct: 613 PKIVTPYTASQPSPPLPPPPPPPPPPPPPPPPPPPPLPSQSAP 655



 Score = 32.0 bits (71), Expect = 0.56
 Identities = 18/42 (42%), Positives = 19/42 (45%), Gaps = 12/42 (28%)

Query: 110 PPPPPPRLAQPRAGPAPPPPGPPSLRRAPINQPRRCQSSGGS 151
           PPPPPP        P PPPP PP     P   P +   S GS
Sbjct: 630 PPPPPP--------PPPPPPPPP----PPPPLPSQSAPSAGS 659



 Score = 32.0 bits (71), Expect = 0.56
 Identities = 23/81 (28%), Positives = 32/81 (39%), Gaps = 8/81 (9%)

Query: 110 PPPPP----PRLAQPRAGPAPPPPGPPSLRRAPINQPRRCQSSGGSPRRCHCS---SVPG 162
           PPP P    P + +  A   PPPP PP++   P+ +P     +  SP             
Sbjct: 850 PPPSPLSPVPSVVKQIASQFPPPPTPPAMESQPL-KPVPANVAPQSPPAVKAKPKWQPSS 908

Query: 163 APAPASQLPRPAGEVNKVKYP 183
            P P+   P P  E + V  P
Sbjct: 909 IPVPSPDFPPPPPESSLVFPP 929



 Score = 30.0 bits (66), Expect = 2.1
 Identities = 24/87 (27%), Positives = 30/87 (34%), Gaps = 23/87 (26%)

Query: 110 PPPPP--------PRLAQPRAGPAPPPPGPP----------SLRRAPINQPRRCQSSGGS 151
           PP PP        P++  P  G  PPPP PP           L+ AP        S+   
Sbjct: 686 PPTPPVMQSQSVKPQILVPPNGVVPPPPPPPPPPTPGSAMAQLKPAPCAPSLPQFSAPPP 745

Query: 152 PRRCH-----CSSVPGAPAPASQLPRP 173
           P + H         P  P P   +P P
Sbjct: 746 PLKIHQVQHITQVAPPTPPPPPPIPAP 772



 Score = 29.6 bits (65), Expect = 2.8
 Identities = 38/148 (25%), Positives = 55/148 (37%), Gaps = 18/148 (12%)

Query: 95  SPHSMSPTHFHGASAPPPPPPRLAQPRAGPAPP------PPGPPSLRRAPINQPRRCQ-S 147
           SP S  P+     ++  PPPP      + P  P      P  PP+++  P  QP      
Sbjct: 853 SPLSPVPSVVKQIASQFPPPPTPPAMESQPLKPVPANVAPQSPPAVKAKPKWQPSSIPVP 912

Query: 148 SGGSPRRCHCSSVPGAPAPASQLPRPAGEVNKVKYPSAAR--GPGRSTLGV----GCEPA 201
           S   P     SS+   P P S +P P         P+  +   PG+ T       G +P 
Sbjct: 913 SPDFPPPPPESSLVFPPPPPSPVPAPPPPPPPTASPTPDKSGSPGKKTSKTSSPGGKKPP 972

Query: 202 ASPAAGGWAGVTSSDSRAVPHTLLPQRP 229
            +P     + + SS     P    P+RP
Sbjct: 973 PTPQRN--SSIKSSSGAEHPE---PKRP 995



 Score = 29.3 bits (64), Expect = 3.6
 Identities = 24/66 (36%), Positives = 27/66 (40%), Gaps = 4/66 (6%)

Query: 111 PPPPPRLAQPR--AGPAPPPPGPPSLRRAPINQPRRCQSSGGSPRRCHCSSVPGAPAP-A 167
           PP PP   QP   A   PP P  P +   P   P++ QS    P     S VP      A
Sbjct: 808 PPVPPAKKQPAFPASYIPPSPPTPPVPVPPPTLPKQ-QSFCAKPPPSPLSPVPSVVKQIA 866

Query: 168 SQLPRP 173
           SQ P P
Sbjct: 867 SQFPPP 872



 Score = 28.1 bits (61), Expect = 8.1
 Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 4/81 (4%)

Query: 111 PPPPPRLAQPRAGPAPPPPGPPSLRRAPINQPRRCQSSGGSPRRCHCSSVPGAPAPASQL 170
           P PPP L + ++  A PPP P  L   P    +        P      S P  P PA+  
Sbjct: 834 PVPPPTLPKQQSFCAKPPPSP--LSPVPSVVKQIASQFPPPPTPPAMESQPLKPVPANVA 891

Query: 171 PR--PAGEVNKVKYPSAARGP 189
           P+  PA +      PS+   P
Sbjct: 892 PQSPPAVKAKPKWQPSSIPVP 912


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.132    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,972,969
Number of Sequences: 37866
Number of extensions: 1157294
Number of successful extensions: 26451
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 663
Number of HSP's successfully gapped in prelim test: 1615
Number of HSP's that attempted gapping in prelim test: 10449
Number of HSP's gapped (non-prelim): 9203
length of query: 262
length of database: 18,247,518
effective HSP length: 100
effective length of query: 162
effective length of database: 14,460,918
effective search space: 2342668716
effective search space used: 2342668716
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.