Guide to the Human Genome
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Name: LOC100132738 Sequence: fasta or formatted (572aa) NCBI GI: 239741538
Description:

PREDICTED: similar to hCG1817845

Not currently referenced in the text

Other entries for this name:
alt prot {1090aa} PREDICTED: similar to hCG1817845
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.1         58           2
 C cysteine            0.7          4           1
 D aspartate           5.6         32           2
 E glutamate           1.7         10           1
 F phenylalanine       2.4         14           1
 G glycine            11.2         64           2
 H histidine           5.4         31           2
 I isoleucine          3.1         18           1
 K lysine              2.1         12           2
 L leucine             8.2         47           3
 M methionine          1.4          8           1
 N asparagine          0.3          2           1
 P proline             7.0         40           2
 Q glutamine           3.7         21           1
 R arginine            8.7         50           2
 S serine              8.4         48           2
 T threonine          13.1         75           1
 V valine              4.0         23           2
 W tryptophan          1.0          6           1
 Y tyrosine            1.6          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to hCG1817845 
LOC100132738          0.864   PREDICTED: similar to hCG1817845 
FLG2                  0.022   filaggrin family member 2 
MUC12                 0.022   PREDICTED: mucin 12 
LOC729792             0.021   PREDICTED: hypothetical protein 
LOC729792             0.021   PREDICTED: hypothetical protein 
LOC729792             0.021   PREDICTED: hypothetical protein 
LOC100294501          0.021   PREDICTED: hypothetical protein 
LOC100294249          0.021   PREDICTED: hypothetical protein XP_002344067 
LOC100294238          0.021   PREDICTED: hypothetical protein 
LOC100294204          0.021   PREDICTED: hypothetical protein 
LOC100294136          0.021   PREDICTED: hypothetical protein 
LOC100294091          0.021   PREDICTED: hypothetical protein 
LOC730401             0.021   PREDICTED: hypothetical protein 
FAM65A                0.019   hypothetical protein LOC79567 
MUC6                  0.019   mucin 6, gastric 
FLG                   0.018   filaggrin 
MUC5B                 0.017   mucin 5, subtype B, tracheobronchial 
MUC4                  0.013   mucin 4 isoform a 
LOC100133714          0.013   PREDICTED: similar to Mucin-12, partial 
MUC12                 0.012   PREDICTED: mucin 12 
MUC12                 0.012   PREDICTED: mucin 12, cell surface associated 
LOC100133761          0.010   PREDICTED: similar to Mucin-6, partial 
LOC100294236          0.010   PREDICTED: similar to diffuse panbronchiolitis crit...
LOC100130716          0.010   PREDICTED: similar to mucin 11 
LOC100130716          0.010   PREDICTED: similar to Mucin-12 
CIC                   0.010   capicua homolog 
HRNR                  0.009   hornerin 
MUC2                  0.009   mucin 2 precursor 
LOC100133790          0.009   PREDICTED: intestinal mucin-like, partial 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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