Search of human proteins with 239741434

Search of human proteins with 239741434

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239741434 PREDICTED: hypothetical protein XP_002342199 [Homo
sapiens]
         (284 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239747560 PREDICTED: hypothetical protein XP_002347649 [Homo ...   589   e-168
gi|239741434 PREDICTED: hypothetical protein XP_002342199 [Homo ...   589   e-168
gi|239752979 PREDICTED: hypothetical protein XP_002345320 [Homo ...   285   2e-77
gi|169211686 PREDICTED: hypothetical protein [Homo sapiens]            92   4e-19
gi|169211670 PREDICTED: hypothetical protein [Homo sapiens]            92   4e-19
gi|169210802 PREDICTED: hypothetical protein [Homo sapiens]            92   4e-19
gi|4504487 histidine rich calcium binding protein precursor [Hom...    44   2e-04
gi|239744552 PREDICTED: hypothetical protein [Homo sapiens]            36   0.044
gi|239755402 PREDICTED: hypothetical protein [Homo sapiens]            35   0.075
gi|239749910 PREDICTED: hypothetical protein XP_002347211 [Homo ...    35   0.075
gi|239744211 PREDICTED: hypothetical protein XP_002343075 [Homo ...    35   0.075
gi|222352122 hypothetical protein LOC284297 [Homo sapiens]             34   0.17 
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom...    33   0.28 
gi|39545575 hypothetical protein LOC55924 isoform 2 [Homo sapiens]     32   0.83 
gi|9506861 hypothetical protein LOC55924 isoform 1 [Homo sapiens]      32   0.83 
gi|4504489 histidine-rich glycoprotein precursor [Homo sapiens]        32   0.83 
gi|239746322 PREDICTED: hypothetical protein XP_002343729 [Homo ...    30   1.8  
gi|10880979 lymphocyte-specific protein 1 isoform 1 [Homo sapiens]     30   1.8  
gi|149274646 hypothetical protein LOC57710 [Homo sapiens]              30   1.8  
gi|5453880 acidic (leucine-rich) nuclear phosphoprotein 32 famil...    30   2.4  
gi|125625357 Sp2 transcription factor [Homo sapiens]                   30   2.4  
gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens]     30   2.4  
gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens]     30   2.4  
gi|124358904 hypothetical protein LOC23201 [Homo sapiens]              30   2.4  
gi|169207312 PREDICTED: hypothetical protein [Homo sapiens]            30   3.1  
gi|239750650 PREDICTED: hypothetical protein [Homo sapiens]            30   3.1  
gi|89037350 PREDICTED: hypothetical protein [Homo sapiens]             30   3.1  
gi|239752069 PREDICTED: hypothetical protein [Homo sapiens]            29   4.1  
gi|239746566 PREDICTED: hypothetical protein XP_002343789 [Homo ...    29   4.1  
gi|32130516 serologically defined colon cancer antigen 1 [Homo s...    29   4.1  

>gi|239747560 PREDICTED: hypothetical protein XP_002347649 [Homo
           sapiens]
          Length = 284

 Score =  589 bits (1518), Expect = e-168
 Identities = 284/284 (100%), Positives = 284/284 (100%)

Query: 1   MYSMLMTFSNSHLITGSPMLPLAAQARSTALRLFQPNIGVSPTTKERIQQPAMATAALRG 60
           MYSMLMTFSNSHLITGSPMLPLAAQARSTALRLFQPNIGVSPTTKERIQQPAMATAALRG
Sbjct: 1   MYSMLMTFSNSHLITGSPMLPLAAQARSTALRLFQPNIGVSPTTKERIQQPAMATAALRG 60

Query: 61  VTTILYLGERRAEWPEPPGLKLSWGSSRTQSQQTLQLRVLRHKAAMTRASYEMYEKLPPG 120
           VTTILYLGERRAEWPEPPGLKLSWGSSRTQSQQTLQLRVLRHKAAMTRASYEMYEKLPPG
Sbjct: 61  VTTILYLGERRAEWPEPPGLKLSWGSSRTQSQQTLQLRVLRHKAAMTRASYEMYEKLPPG 120

Query: 121 HQPATNMSIVAWSPSIALHTPADTCIRVPQTRLTSARWPSSQPSCGAASTFGAVDSPERD 180
           HQPATNMSIVAWSPSIALHTPADTCIRVPQTRLTSARWPSSQPSCGAASTFGAVDSPERD
Sbjct: 121 HQPATNMSIVAWSPSIALHTPADTCIRVPQTRLTSARWPSSQPSCGAASTFGAVDSPERD 180

Query: 181 LDPEVAVHSNCQQGQDGALGEDEDRTGNHEAGVEVGLWPNVDEDGEGDDQGTHGHISHRQ 240
           LDPEVAVHSNCQQGQDGALGEDEDRTGNHEAGVEVGLWPNVDEDGEGDDQGTHGHISHRQ
Sbjct: 181 LDPEVAVHSNCQQGQDGALGEDEDRTGNHEAGVEVGLWPNVDEDGEGDDQGTHGHISHRQ 240

Query: 241 RHDEAEGGIPQRLVHLHRPDHQHVPGHRDQGDEHLDADVGGLES 284
           RHDEAEGGIPQRLVHLHRPDHQHVPGHRDQGDEHLDADVGGLES
Sbjct: 241 RHDEAEGGIPQRLVHLHRPDHQHVPGHRDQGDEHLDADVGGLES 284


>gi|239741434 PREDICTED: hypothetical protein XP_002342199 [Homo
           sapiens]
          Length = 284

 Score =  589 bits (1518), Expect = e-168
 Identities = 284/284 (100%), Positives = 284/284 (100%)

Query: 1   MYSMLMTFSNSHLITGSPMLPLAAQARSTALRLFQPNIGVSPTTKERIQQPAMATAALRG 60
           MYSMLMTFSNSHLITGSPMLPLAAQARSTALRLFQPNIGVSPTTKERIQQPAMATAALRG
Sbjct: 1   MYSMLMTFSNSHLITGSPMLPLAAQARSTALRLFQPNIGVSPTTKERIQQPAMATAALRG 60

Query: 61  VTTILYLGERRAEWPEPPGLKLSWGSSRTQSQQTLQLRVLRHKAAMTRASYEMYEKLPPG 120
           VTTILYLGERRAEWPEPPGLKLSWGSSRTQSQQTLQLRVLRHKAAMTRASYEMYEKLPPG
Sbjct: 61  VTTILYLGERRAEWPEPPGLKLSWGSSRTQSQQTLQLRVLRHKAAMTRASYEMYEKLPPG 120

Query: 121 HQPATNMSIVAWSPSIALHTPADTCIRVPQTRLTSARWPSSQPSCGAASTFGAVDSPERD 180
           HQPATNMSIVAWSPSIALHTPADTCIRVPQTRLTSARWPSSQPSCGAASTFGAVDSPERD
Sbjct: 121 HQPATNMSIVAWSPSIALHTPADTCIRVPQTRLTSARWPSSQPSCGAASTFGAVDSPERD 180

Query: 181 LDPEVAVHSNCQQGQDGALGEDEDRTGNHEAGVEVGLWPNVDEDGEGDDQGTHGHISHRQ 240
           LDPEVAVHSNCQQGQDGALGEDEDRTGNHEAGVEVGLWPNVDEDGEGDDQGTHGHISHRQ
Sbjct: 181 LDPEVAVHSNCQQGQDGALGEDEDRTGNHEAGVEVGLWPNVDEDGEGDDQGTHGHISHRQ 240

Query: 241 RHDEAEGGIPQRLVHLHRPDHQHVPGHRDQGDEHLDADVGGLES 284
           RHDEAEGGIPQRLVHLHRPDHQHVPGHRDQGDEHLDADVGGLES
Sbjct: 241 RHDEAEGGIPQRLVHLHRPDHQHVPGHRDQGDEHLDADVGGLES 284


>gi|239752979 PREDICTED: hypothetical protein XP_002345320 [Homo
           sapiens]
          Length = 243

 Score =  285 bits (730), Expect = 2e-77
 Identities = 133/144 (92%), Positives = 135/144 (93%), Gaps = 1/144 (0%)

Query: 141 PADTCIRVPQTRLTSARWPSSQPSCGAASTFGAVDSPERDLDPEVAVHSNCQQGQDGALG 200
           P+ +C   P  R T  RWPSSQPSCGAASTFGAVDSPERDLDPEVAVHSNCQQGQDGALG
Sbjct: 101 PSPSCFSGPAERSTE-RWPSSQPSCGAASTFGAVDSPERDLDPEVAVHSNCQQGQDGALG 159

Query: 201 EDEDRTGNHEAGVEVGLWPNVDEDGEGDDQGTHGHISHRQRHDEAEGGIPQRLVHLHRPD 260
           EDEDRTGNHEAGVEVGLWPNVDEDGEGDDQGTHGHISHRQRHDEAEGGIPQRLVHLHRPD
Sbjct: 160 EDEDRTGNHEAGVEVGLWPNVDEDGEGDDQGTHGHISHRQRHDEAEGGIPQRLVHLHRPD 219

Query: 261 HQHVPGHRDQGDEHLDADVGGLES 284
           HQHVPGHRDQGDEHLDADVGGLES
Sbjct: 220 HQHVPGHRDQGDEHLDADVGGLES 243


>gi|169211686 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 252

 Score = 92.4 bits (228), Expect = 4e-19
 Identities = 49/120 (40%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 160 SSQPSCGAASTFGAVDSPERDLDPEVAVHSNCQQGQDGALGEDEDRTGNHEAGVEVGLWP 219
           S+ PSC        +  PERD D +V+V  + Q+ +DGAL E +   G  EA VEV    
Sbjct: 105 SNDPSCSGPRDQTFI--PERDTDGQVSVDCHGQKAEDGALREHQHEAGEEEAAVEVSAEA 162

Query: 220 NVDEDGEGDDQGTHGHISHRQRHDEAEGGIPQRLVHLHRPDHQHVPGHRDQGDEHLDADV 279
             D DG+GD +  HGH+   Q H E  GG  Q +   HR  HQHV  HR +GD+ L   V
Sbjct: 163 QADGDGKGDGEEPHGHVGRSQGHQEVVGGRLQSVRRAHRGAHQHVARHRKRGDDQLQRHV 222


>gi|169211670 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 252

 Score = 92.4 bits (228), Expect = 4e-19
 Identities = 49/120 (40%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 160 SSQPSCGAASTFGAVDSPERDLDPEVAVHSNCQQGQDGALGEDEDRTGNHEAGVEVGLWP 219
           S+ PSC        +  PERD D +V+V  + Q+ +DGAL E +   G  EA VEV    
Sbjct: 105 SNDPSCSGPRDQTFI--PERDTDGQVSVDCHGQKAEDGALREHQHEAGEEEAAVEVSAEA 162

Query: 220 NVDEDGEGDDQGTHGHISHRQRHDEAEGGIPQRLVHLHRPDHQHVPGHRDQGDEHLDADV 279
             D DG+GD +  HGH+   Q H E  GG  Q +   HR  HQHV  HR +GD+ L   V
Sbjct: 163 QADGDGKGDGEEPHGHVGRSQGHQEVVGGRLQSVRRAHRGAHQHVARHRKRGDDQLQRHV 222


>gi|169210802 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 252

 Score = 92.4 bits (228), Expect = 4e-19
 Identities = 49/120 (40%), Positives = 63/120 (52%), Gaps = 2/120 (1%)

Query: 160 SSQPSCGAASTFGAVDSPERDLDPEVAVHSNCQQGQDGALGEDEDRTGNHEAGVEVGLWP 219
           S+ PSC        +  PERD D +V+V  + Q+ +DGAL E +   G  EA VEV    
Sbjct: 105 SNDPSCSGPRDQTFI--PERDTDGQVSVDCHGQKAEDGALREHQHEAGEEEAAVEVSAEA 162

Query: 220 NVDEDGEGDDQGTHGHISHRQRHDEAEGGIPQRLVHLHRPDHQHVPGHRDQGDEHLDADV 279
             D DG+GD +  HGH+   Q H E  GG  Q +   HR  HQHV  HR +GD+ L   V
Sbjct: 163 QADGDGKGDGEEPHGHVGRSQGHQEVVGGRLQSVRRAHRGAHQHVARHRKRGDDQLQRHV 222


>gi|4504487 histidine rich calcium binding protein precursor [Homo
           sapiens]
          Length = 699

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 4/102 (3%)

Query: 175 DSPERDLDPEVAVHSNCQQGQDGALGEDEDRT-GNHEAGVEVGLWPNVDEDGEGDDQGT- 232
           D  + D D  +       + Q   + EDED + G+H          + ++D + DD  T 
Sbjct: 254 DDDDDDDDVSIEYRHQAHRHQGHGIEEDEDVSDGHHHRDPSHRHRSHEEDDNDDDDVSTE 313

Query: 233 HGHISHR-QRHDEAEGGIPQRLVHLHRPDHQHVPGHRDQGDE 273
           +GH +HR Q H + E        H H PDH+H  GHRD+ ++
Sbjct: 314 YGHQAHRHQDHRKEEVEAVSGEHHHHVPDHRH-QGHRDEEED 354



 Score = 34.7 bits (78), Expect = 0.098
 Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 13/92 (14%)

Query: 188 HSNCQQGQDGALGEDEDRTGNHEAGVEVGLWPNVDEDGEGDDQGTHGHISHRQR-HDEAE 246
           H   + G  G  GED++     E           +E+ E +    +GH +HR R H   E
Sbjct: 175 HHILRHGHRGHDGEDDEGEEEEE-----------EEEEEEEASTEYGHQAHRHRGHGSEE 223

Query: 247 GGIPQRLVHLHRPDHQHVPGHRDQGDEHLDAD 278
                   H H P H+H  GH +  D+  D D
Sbjct: 224 DEDVSDGHHHHGPSHRH-QGHEEDDDDDDDDD 254


>gi|239744552 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 221

 Score = 35.8 bits (81), Expect = 0.044
 Identities = 44/155 (28%), Positives = 55/155 (35%), Gaps = 34/155 (21%)

Query: 120 GHQPATNMSIVAWSPSIALHTPADTCIRVPQT-RLTSARWPSSQPSCGAASTFGAVDSPE 178
           G + A   +  A  PS A   P +  +R P +     A+ PSS  S G A   GA+ SP 
Sbjct: 75  GPRAARGGARAAPMPSSAPRGPTEPALRRPSSAERPLAQAPSSSASVGRAP--GAMASPS 132

Query: 179 R--------------------DLDPE-----VAVHSNCQQGQDGALGEDEDRTGNHEAGV 213
           R                    D+ PE     + +     Q QDG  GED  R G  E G 
Sbjct: 133 RSSEATGKPRGRDGRPRREEDDVPPEEKRLRLLLEGGSAQPQDGEDGEDAPRPGRVETGT 192

Query: 214 EVGLWPNVDEDGEGDDQGTHGHISHRQRHDEAEGG 248
           + G       DG G      G    R R D    G
Sbjct: 193 QTG------GDGRGVSDAGAGVRGCRVRGDAGNEG 221


>gi|239755402 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 321

 Score = 35.0 bits (79), Expect = 0.075
 Identities = 37/125 (29%), Positives = 47/125 (37%), Gaps = 14/125 (11%)

Query: 159 PSSQPSCGAASTFGAVDSPERDLDPEVAVHSNCQQGQ------DGALGEDEDRTGNHEAG 212
           P  Q S GA +   A   P+R    +VAVH  C  G+      DG   ++ED+     A 
Sbjct: 152 PDGQHSVGAEAQRDA--PPQRVHQHDVAVH--CDGGEREHRHIDGDRLQEEDQVAQ-AAA 206

Query: 213 VEVGLWPNVDEDGEGDDQGTHGHISHRQRHDEAEGGIPQRLVHLHRPDHQHVPGHRDQGD 272
                W       E    G H H+   Q  DE    + Q     H  DHQH      Q  
Sbjct: 207 EHPAAWLEGIGQRERHAGGAHEHVGQGQVADEEVRHVVQPA---HPRDHQHQQAVAHQPH 263

Query: 273 EHLDA 277
           +H DA
Sbjct: 264 DHHDA 268


>gi|239749910 PREDICTED: hypothetical protein XP_002347211 [Homo
           sapiens]
          Length = 321

 Score = 35.0 bits (79), Expect = 0.075
 Identities = 37/125 (29%), Positives = 47/125 (37%), Gaps = 14/125 (11%)

Query: 159 PSSQPSCGAASTFGAVDSPERDLDPEVAVHSNCQQGQ------DGALGEDEDRTGNHEAG 212
           P  Q S GA +   A   P+R    +VAVH  C  G+      DG   ++ED+     A 
Sbjct: 152 PDGQHSVGAEAQRDA--PPQRVHQHDVAVH--CDGGEREHRHIDGDRLQEEDQVAQ-AAA 206

Query: 213 VEVGLWPNVDEDGEGDDQGTHGHISHRQRHDEAEGGIPQRLVHLHRPDHQHVPGHRDQGD 272
                W       E    G H H+   Q  DE    + Q     H  DHQH      Q  
Sbjct: 207 EHPAAWLEGIGQRERHAGGAHEHVGQGQVADEEVRHVVQPA---HPRDHQHQQAVAHQPH 263

Query: 273 EHLDA 277
           +H DA
Sbjct: 264 DHHDA 268


>gi|239744211 PREDICTED: hypothetical protein XP_002343075 [Homo
           sapiens]
          Length = 321

 Score = 35.0 bits (79), Expect = 0.075
 Identities = 37/125 (29%), Positives = 47/125 (37%), Gaps = 14/125 (11%)

Query: 159 PSSQPSCGAASTFGAVDSPERDLDPEVAVHSNCQQGQ------DGALGEDEDRTGNHEAG 212
           P  Q S GA +   A   P+R    +VAVH  C  G+      DG   ++ED+     A 
Sbjct: 152 PDGQHSVGAEAQRDA--PPQRVHQHDVAVH--CDGGEREHRHIDGDRLQEEDQVAQ-AAA 206

Query: 213 VEVGLWPNVDEDGEGDDQGTHGHISHRQRHDEAEGGIPQRLVHLHRPDHQHVPGHRDQGD 272
                W       E    G H H+   Q  DE    + Q     H  DHQH      Q  
Sbjct: 207 EHPAAWLEGIGQRERHAGGAHEHVGQGQVADEEVRHVVQPA---HPRDHQHQQAVAHQPH 263

Query: 273 EHLDA 277
           +H DA
Sbjct: 264 DHHDA 268


>gi|222352122 hypothetical protein LOC284297 [Homo sapiens]
          Length = 1573

 Score = 33.9 bits (76), Expect = 0.17
 Identities = 34/122 (27%), Positives = 50/122 (40%), Gaps = 20/122 (16%)

Query: 75   PEPPGLKLSWGSSRTQSQQTLQLRVLRHKAAMTRASYEMYEKLPPGHQPA--TNMSIVAW 132
            P PPG  L+  SSR          +  H A  + A+ +  +  PP   PA  TN  ++  
Sbjct: 1015 PGPPGPALTSDSSR---------ELTPHSALTSEATSDAPDTSPPTPDPASRTNPDLILT 1065

Query: 133  SPSIALHTPADTCIRV------PQTRLTSARWPSSQPSCGAASTFGAVDS---PERDLDP 183
            SP  AL TP  + +        P    T  +  +S PS  +  T  +  S   PE D  P
Sbjct: 1066 SPDFALSTPDSSVVPALTPEPSPTPLPTLPKELTSDPSTPSEVTSLSPTSEQVPESDTTP 1125

Query: 184  EV 185
            ++
Sbjct: 1126 DL 1127


>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
           sapiens]
          Length = 1152

 Score = 33.1 bits (74), Expect = 0.28
 Identities = 18/70 (25%), Positives = 31/70 (44%), Gaps = 6/70 (8%)

Query: 203 EDRTGNHEAGVEVGLWPNVDEDGEGDDQGTHGHISHRQRHDEAEGGIPQRLVHLHRPDHQ 262
           E+R G  E G E G      + GEG+++ T G    ++   E EGG  +        + +
Sbjct: 778 EERAGKEEKGEEEG------DQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEE 831

Query: 263 HVPGHRDQGD 272
              G  ++G+
Sbjct: 832 EGEGEEEEGE 841



 Score = 30.8 bits (68), Expect = 1.4
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 2/48 (4%)

Query: 200 GEDEDRTGNHEAGVEVGLWPNVDEDGEGDDQGTHGHISHRQRHDEAEG 247
           GE+E+  G  E G   G      E+GEG+++G  G     +   E EG
Sbjct: 842 GEEEEGEGEEEEG--EGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEG 887



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%)

Query: 193 QGQDGALGEDEDRTGNHEAGVEVGLWPNVDEDGEG--DDQGTHGHISHRQRHDEAEG 247
           +G++   GE E+  G  E G E G     +E+GEG  +++G  G     +   E EG
Sbjct: 886 EGEEEGEGEGEEEEGEGE-GEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEG 941



 Score = 30.0 bits (66), Expect = 2.4
 Identities = 17/54 (31%), Positives = 22/54 (40%), Gaps = 6/54 (11%)

Query: 200 GEDEDRTGNHEAGVEVGLWPNVDEDG------EGDDQGTHGHISHRQRHDEAEG 247
           GE E   G  E   E G W   +E+G      EG+ +G  G     +   E EG
Sbjct: 937 GEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEG 990


>gi|39545575 hypothetical protein LOC55924 isoform 2 [Homo sapiens]
          Length = 282

 Score = 31.6 bits (70), Expect = 0.83
 Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 21/112 (18%)

Query: 159 PSSQPSCGAASTFGAVDSP-ERDLD--PEVAVHSNC-QQGQDGALGEDEDRT-------- 206
           PSSQPS G+++ F +  S   RDL   P    H +C QQG +    +D   T        
Sbjct: 78  PSSQPSLGSSTKFPSHRSVCGRDLAPLPRTQPHQSCAQQGPERVEPDDWTSTLMSRGRNR 137

Query: 207 -----GNHEAGVEVGLWPNVDEDGEGDDQGTHGHISHRQRHDEAEGGIPQRL 253
                G++     VG W ++ E  +G ++G  G      R  + E G PQ L
Sbjct: 138 QPLVLGDNVFADLVGNWLDLPELEKGGEKGETG----GAREPKGEKGQPQEL 185


>gi|9506861 hypothetical protein LOC55924 isoform 1 [Homo sapiens]
          Length = 297

 Score = 31.6 bits (70), Expect = 0.83
 Identities = 34/112 (30%), Positives = 49/112 (43%), Gaps = 21/112 (18%)

Query: 159 PSSQPSCGAASTFGAVDSP-ERDLD--PEVAVHSNC-QQGQDGALGEDEDRT-------- 206
           PSSQPS G+++ F +  S   RDL   P    H +C QQG +    +D   T        
Sbjct: 93  PSSQPSLGSSTKFPSHRSVCGRDLAPLPRTQPHQSCAQQGPERVEPDDWTSTLMSRGRNR 152

Query: 207 -----GNHEAGVEVGLWPNVDEDGEGDDQGTHGHISHRQRHDEAEGGIPQRL 253
                G++     VG W ++ E  +G ++G  G      R  + E G PQ L
Sbjct: 153 QPLVLGDNVFADLVGNWLDLPELEKGGEKGETG----GAREPKGEKGQPQEL 200


>gi|4504489 histidine-rich glycoprotein precursor [Homo sapiens]
          Length = 525

 Score = 31.6 bits (70), Expect = 0.83
 Identities = 22/83 (26%), Positives = 28/83 (33%), Gaps = 9/83 (10%)

Query: 189 SNCQQGQDGALGEDEDRTGNHEAGVEVGLWPNVDEDGEGDDQGTHGHISHRQRHDEAEGG 248
           S+CQ    G  G       N+ +     L P+     E    G H H  H   HD     
Sbjct: 325 SSCQHATFGTNGAQRHSHNNNSSD----LHPHKHHSHEQHPHGHHPHAHHPHEHDTH--- 377

Query: 249 IPQRLVHLHRPDHQHVPGHRDQG 271
             ++  H H P   H  GH   G
Sbjct: 378 --RQHPHGHHPHGHHPHGHHPHG 398


>gi|239746322 PREDICTED: hypothetical protein XP_002343729 [Homo
           sapiens]
          Length = 221

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 30/113 (26%), Positives = 41/113 (36%), Gaps = 17/113 (15%)

Query: 176 SPERDLDPEVAVHSNCQQGQDGALGED-----------EDRTGNHEAGVEVGLWPNVDED 224
           SP   L P+   H     G DG   +D           +D  G    G  V L+   ++D
Sbjct: 14  SPSEVLAPDGFKHQQKAVGADGGQEQDAGVHVEQDEGGQDAAGGPAKGPVVMLYNGREQD 73

Query: 225 GEGDDQGTHGHISHRQRHDEAEGGIPQRL-VHLHRPDHQHVPGHRDQGDEHLD 276
           G+       G+     R  E   GI   L +    PDHQ +  H  Q D+  D
Sbjct: 74  GQRQAGEEVGY-----RQVEEPDGIDGPLGLECRHPDHQGIAQHSHQEDDCKD 121


>gi|10880979 lymphocyte-specific protein 1 isoform 1 [Homo sapiens]
          Length = 339

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 13/78 (16%)

Query: 182 DPEVAVHSNCQQGQDGALGEDEDRTGNHE---------AGVEVGLWPNVDED-GEGDDQG 231
           D E AVH  CQ  +D  L   ++  G H            ++    P +DED G GD   
Sbjct: 27  DEEEAVHEQCQHERDRQLQAQDEEGGGHVPERPKQEMLLSLKPSEAPELDEDEGFGD--- 83

Query: 232 THGHISHRQRHDEAEGGI 249
                  RQ+H+ A+G +
Sbjct: 84  WSQRPEQRQQHEGAQGAL 101


>gi|149274646 hypothetical protein LOC57710 [Homo sapiens]
          Length = 1190

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 35/132 (26%), Positives = 42/132 (31%), Gaps = 19/132 (14%)

Query: 162 QPSCGAASTFGAVDSPERDLDPEVAVHSN-----------CQQGQDGAL----GEDEDRT 206
           Q +CG     G + SP R L  E  +H             C    D AL      D  RT
Sbjct: 564 QAACGMERVLGGLSSPLRLLPAEPRLHMEWIRETHIGDTVCPAEVDSALDSTDNSDNCRT 623

Query: 207 GNHEAGVEVGLWPNVDEDGEGDDQGTHGHISHRQR-HDEAEGGIP---QRLVHLHRPDHQ 262
            + EAG     W      G        G      R   +AE  +P   Q   HL R D  
Sbjct: 624 DSEEAGTSQAGWACGRTQGSSPRLRLRGSRPRGHRWSKKAEAELPWGLQAQQHLPRADDV 683

Query: 263 HVPGHRDQGDEH 274
            V     +G  H
Sbjct: 684 EVENEVKEGRGH 695


>gi|5453880 acidic (leucine-rich) nuclear phosphoprotein 32 family,
           member A [Homo sapiens]
          Length = 249

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 19/73 (26%), Positives = 32/73 (43%)

Query: 175 DSPERDLDPEVAVHSNCQQGQDGALGEDEDRTGNHEAGVEVGLWPNVDEDGEGDDQGTHG 234
           D  E + D +  V  + +   +   GE+ED +G  E   E      VD++ + ++ G   
Sbjct: 173 DEDEEEYDEDAQVVEDEEDEDEEEEGEEEDVSGEEEEDEEGYNDGEVDDEEDEEELGEEE 232

Query: 235 HISHRQRHDEAEG 247
               R+R  E EG
Sbjct: 233 RGQKRKREPEDEG 245


>gi|125625357 Sp2 transcription factor [Homo sapiens]
          Length = 613

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 41/180 (22%), Positives = 72/180 (40%), Gaps = 26/180 (14%)

Query: 7   TFSNSHLITGSPMLPLAA---QARSTALRLFQPNIGVSPTTKERIQQPAMATAALRGVTT 63
           T + + L+T SP  PL+    +AR  +L   QP + V+    E+++   + T A      
Sbjct: 225 TGAPTQLLTESPPTPLSKTNKKARKKSLPASQPPVAVA----EQVETVLIETTA----DN 276

Query: 64  ILYLGERRAEWPEPPG------LKLSWGSSRTQSQQTLQLRVLRHKAAMTRASYEMYEKL 117
           I+  G        P G       ++     + + QQ +Q+   +    + +A+      +
Sbjct: 277 IIQAGNNLLIVQSPGGGQPAVVQQVQVVPPKAEQQQVVQIP--QQALRVVQAASATLPTV 334

Query: 118 PPGHQPATNMSIVAWSPSIALHTPADTCIRVPQTRLTSARWPSSQPSCGAASTFGAVDSP 177
           P   +P+ N  I A  P     TP    IR P   + +     S P+  AA++     SP
Sbjct: 335 P--QKPSQNFQIQAAEP-----TPTQVYIRTPSGEVQTVLVQDSPPATAAATSNTTCSSP 387


>gi|33946282 hypothetical protein LOC25962 isoform 1 [Homo sapiens]
          Length = 1812

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 22/108 (20%)

Query: 176 SPERDLDPEVAVHSNCQQGQDGALGEDEDRTGNH-EAGVEVGLWPNVDEDGEGDDQGTHG 234
           SP+R+  P+   +S+     +G + E++   G   E  V+V      +ED + DD+ T  
Sbjct: 222 SPDRNSVPQEGQYSD-----EGEVEEEQQEEGEEDEDDVDV----EEEEDEDEDDRRTVD 272

Query: 235 HISHRQRHDEAEGGIPQRLVHLHRPDHQHVPGHRDQGDEHLDADVGGL 282
            I   +  DE E G             +   G  D G E + +D  G+
Sbjct: 273 SIPEEEEEDEEEEG------------EEDEEGEGDDGYEQISSDEDGI 308


>gi|33946280 hypothetical protein LOC25962 isoform 2 [Homo sapiens]
          Length = 1147

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 22/108 (20%)

Query: 176 SPERDLDPEVAVHSNCQQGQDGALGEDEDRTGNH-EAGVEVGLWPNVDEDGEGDDQGTHG 234
           SP+R+  P+   +S+     +G + E++   G   E  V+V      +ED + DD+ T  
Sbjct: 222 SPDRNSVPQEGQYSD-----EGEVEEEQQEEGEEDEDDVDV----EEEEDEDEDDRRTVD 272

Query: 235 HISHRQRHDEAEGGIPQRLVHLHRPDHQHVPGHRDQGDEHLDADVGGL 282
            I   +  DE E G             +   G  D G E + +D  G+
Sbjct: 273 SIPEEEEEDEEEEG------------EEDEEGEGDDGYEQISSDEDGI 308


>gi|124358904 hypothetical protein LOC23201 [Homo sapiens]
          Length = 235

 Score = 30.0 bits (66), Expect = 2.4
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 3/52 (5%)

Query: 120 GHQPATNMSIVAWSPSIALHTPADTCIRVPQTRLTSARWPSSQPSCGAASTF 171
           G+  A   +  A++PS+    P ++    P T L    WP +  SCG   TF
Sbjct: 24  GYPTAYPAAAPAYNPSLY---PTNSPSYAPATLLMKQAWPQNSSSCGTEGTF 72


>gi|169207312 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 414

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 46/205 (22%), Positives = 71/205 (34%), Gaps = 28/205 (13%)

Query: 14  ITGSPMLPLAAQARSTALRLFQPNIGVSPTTKERIQQPAMATAAL--RGVTTILYLGERR 71
           ++ +P  PL A AR+  +RL  P+    P   E I   A  T+ L  RG  T    G ++
Sbjct: 127 LSQAPGRPLGACARAKGIRLVNPS---PPRPPEPIPASAAVTSGLTARGPNTSATPGPQK 183

Query: 72  AEWPEPPGLKLSWGSSRTQSQQTLQLRVLRHKAAMTRASYEMYEKLPPGHQPATNMSIVA 131
                     +     R  +    +    R +    R S  +    PP H          
Sbjct: 184 GRGSAERTNHIPKDKQRVAAPPPPE----RPRVPFCRGSSGLSVPTPPEHAGGRRKKFTR 239

Query: 132 WSPSIALHTPADTCIRVPQTRLTSARWPSSQPSCGAASTFGA----VDSPERDLDPEVAV 187
             P             +P+T    +  PS++P C  +S+  A      SP R+  P  A 
Sbjct: 240 TRP-------------LPRTSSFLSEVPSTRPLCATSSSHSAPLPFFWSPLRNPSPRPA- 285

Query: 188 HSNCQQGQDGALGEDEDRTGNHEAG 212
              C + + G L      TG   +G
Sbjct: 286 -PACGELRLGRLSPPRADTGGSSSG 309


>gi|239750650 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 414

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 46/205 (22%), Positives = 71/205 (34%), Gaps = 28/205 (13%)

Query: 14  ITGSPMLPLAAQARSTALRLFQPNIGVSPTTKERIQQPAMATAAL--RGVTTILYLGERR 71
           ++ +P  PL A AR+  +RL  P+    P   E I   A  T+ L  RG  T    G ++
Sbjct: 127 LSQAPGRPLGACARAKGIRLVNPS---PPRPPEPIPASAAVTSGLTARGPNTSATPGPQK 183

Query: 72  AEWPEPPGLKLSWGSSRTQSQQTLQLRVLRHKAAMTRASYEMYEKLPPGHQPATNMSIVA 131
                     +     R  +    +    R +    R S  +    PP H          
Sbjct: 184 GRGSAERTNHIPKDKQRVAAPPPPE----RPRVPFCRGSSGLSVPTPPEHAGGRRKKFTR 239

Query: 132 WSPSIALHTPADTCIRVPQTRLTSARWPSSQPSCGAASTFGA----VDSPERDLDPEVAV 187
             P             +P+T    +  PS++P C  +S+  A      SP R+  P  A 
Sbjct: 240 TRP-------------LPRTSSFLSEVPSTRPLCATSSSHSAPLPFFWSPLRNPSPRPA- 285

Query: 188 HSNCQQGQDGALGEDEDRTGNHEAG 212
              C + + G L      TG   +G
Sbjct: 286 -PACGELRLGRLSPPRADTGGSSSG 309


>gi|89037350 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 414

 Score = 29.6 bits (65), Expect = 3.1
 Identities = 46/205 (22%), Positives = 71/205 (34%), Gaps = 28/205 (13%)

Query: 14  ITGSPMLPLAAQARSTALRLFQPNIGVSPTTKERIQQPAMATAAL--RGVTTILYLGERR 71
           ++ +P  PL A AR+  +RL  P+    P   E I   A  T+ L  RG  T    G ++
Sbjct: 127 LSQAPGRPLGACARAKGIRLVNPS---PPRPPEPIPASAAVTSGLTARGPNTSATPGPQK 183

Query: 72  AEWPEPPGLKLSWGSSRTQSQQTLQLRVLRHKAAMTRASYEMYEKLPPGHQPATNMSIVA 131
                     +     R  +    +    R +    R S  +    PP H          
Sbjct: 184 GRGSAERTNHIPKDKQRVAAPPPPE----RPRVPFCRGSSGLSVPTPPEHAGGRRKKFTR 239

Query: 132 WSPSIALHTPADTCIRVPQTRLTSARWPSSQPSCGAASTFGA----VDSPERDLDPEVAV 187
             P             +P+T    +  PS++P C  +S+  A      SP R+  P  A 
Sbjct: 240 TRP-------------LPRTSSFLSEVPSTRPLCATSSSHSAPLPFFWSPLRNPSPRPA- 285

Query: 188 HSNCQQGQDGALGEDEDRTGNHEAG 212
              C + + G L      TG   +G
Sbjct: 286 -PACGELRLGRLSPPRADTGGSSSG 309


>gi|239752069 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 216

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 47/191 (24%), Positives = 65/191 (34%), Gaps = 15/191 (7%)

Query: 20  LPLAAQARSTALRLFQPNIGVSPTTKERIQQPAMATAALRGVTTILYLGERRAEWPEPPG 79
           LP       +A R   P++G +PT+  R  Q A  ++A  G    L    R A    P  
Sbjct: 30  LPQNMAIWGSASRPALPSVGAAPTSSARAVQAASRSSAKPGSIATL----RGA----PSA 81

Query: 80  LKLSWGSSRTQSQQTLQLRVLRHKAAMTRASYEMYEKLPPG-HQPATNMSIVAWSPSIAL 138
           L   W   R  S +     V R   A + A   +   LP    +P       + +  +  
Sbjct: 82  LLCEWDPPRPCSARAATAAVSRGPRARSSACSRL--PLPRKLTEPERGGGAQSQASQLIR 139

Query: 139 HTPADTCIR----VPQTRLTSARWPSSQPSCGAASTFGAVDSPERDLDPEVAVHSNCQQG 194
            TP  T  R     P     S R   S+P+   A   GA  +P     P    H      
Sbjct: 140 PTPLGTRERPLAAPPGNCARSRREGPSRPAPTGARALGAACTPRAPSAPRPTAHLGFVNS 199

Query: 195 QDGALGEDEDR 205
              +LG  E R
Sbjct: 200 GRESLGPGEGR 210


>gi|239746566 PREDICTED: hypothetical protein XP_002343789 [Homo
           sapiens]
          Length = 216

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 47/191 (24%), Positives = 65/191 (34%), Gaps = 15/191 (7%)

Query: 20  LPLAAQARSTALRLFQPNIGVSPTTKERIQQPAMATAALRGVTTILYLGERRAEWPEPPG 79
           LP       +A R   P++G +PT+  R  Q A  ++A  G    L    R A    P  
Sbjct: 30  LPQNMAIWGSASRPALPSVGAAPTSSARAVQAASRSSAKPGSIATL----RGA----PSA 81

Query: 80  LKLSWGSSRTQSQQTLQLRVLRHKAAMTRASYEMYEKLPPG-HQPATNMSIVAWSPSIAL 138
           L   W   R  S +     V R   A + A   +   LP    +P       + +  +  
Sbjct: 82  LLCEWDPPRPCSARAATAAVSRGPRARSSACSRL--PLPRKLTEPERGGGAQSQASQLIR 139

Query: 139 HTPADTCIR----VPQTRLTSARWPSSQPSCGAASTFGAVDSPERDLDPEVAVHSNCQQG 194
            TP  T  R     P     S R   S+P+   A   GA  +P     P    H      
Sbjct: 140 PTPLGTRERPLAAPPGNCARSRREGPSRPAPTGARALGAACTPRAPSAPRPTAHLGFVNS 199

Query: 195 QDGALGEDEDR 205
              +LG  E R
Sbjct: 200 GRESLGPGEGR 210


>gi|32130516 serologically defined colon cancer antigen 1 [Homo
           sapiens]
          Length = 1076

 Score = 29.3 bits (64), Expect = 4.1
 Identities = 26/94 (27%), Positives = 36/94 (38%), Gaps = 12/94 (12%)

Query: 187 VHSNCQQGQDGALGEDEDRTGNHEAGVEVGLWPNVDEDG----EGDDQGTHGHISHRQRH 242
           +    +Q   G    DED+   HE  VEV L   VD++      G D+     I      
Sbjct: 691 ISEEMEQLDGGDTSSDEDKE-EHETPVEVELMTQVDQEDITLQSGRDELNEELIQEESSE 749

Query: 243 DEAEGGIPQRLVHLHRPDHQHVPGHRDQGDEHLD 276
           DE E           R D   V   +D+G+E L+
Sbjct: 750 DEGE-------YEEVRKDQDSVGEMKDEGEETLN 776


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.314    0.130    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,680,306
Number of Sequences: 37866
Number of extensions: 626116
Number of successful extensions: 1224
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 50
Number of HSP's that attempted gapping in prelim test: 1175
Number of HSP's gapped (non-prelim): 89
length of query: 284
length of database: 18,247,518
effective HSP length: 101
effective length of query: 183
effective length of database: 14,423,052
effective search space: 2639418516
effective search space used: 2639418516
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.