Guide to the Human Genome
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Search of human proteins with 239741327

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239741327 PREDICTED: hypothetical protein XP_002342174 [Homo
sapiens]
         (282 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239752904 PREDICTED: hypothetical protein [Homo sapiens]           604   e-173
gi|239747453 PREDICTED: hypothetical protein XP_002347537 [Homo ...   604   e-173
gi|239741327 PREDICTED: hypothetical protein XP_002342174 [Homo ...   604   e-173
gi|23510413 sorting nexin 26 [Homo sapiens]                            37   0.015
gi|28912912 NK6 transcription factor related, locus 2 [Homo sapi...    35   0.057
gi|4557779 myocilin [Homo sapiens]                                     34   0.13 
gi|156104862 ankyrin repeat domain 38 [Homo sapiens]                   33   0.22 
gi|84490388 R-spondin1 [Homo sapiens]                                  33   0.28 
gi|153266907 gamma-glutamyltransferase 5 isoform c [Homo sapiens]      33   0.28 
gi|153266885 gamma-glutamyltransferase 5 isoform b [Homo sapiens]      33   0.28 
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    33   0.37 
gi|13569901 TSC22 domain family, member 4 [Homo sapiens]               33   0.37 
gi|169183882 PREDICTED: hypothetical protein [Homo sapiens]            32   0.48 
gi|239754626 PREDICTED: hypothetical protein [Homo sapiens]            32   0.48 
gi|122937472 bicaudal C homolog 1 [Homo sapiens]                       32   0.63 
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi...    32   0.63 
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi...    32   0.63 
gi|5174543 myocyte enhancer factor 2B isoform b [Homo sapiens]         32   0.82 
gi|239754512 PREDICTED: hypothetical protein [Homo sapiens]            32   0.82 
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        32   0.82 
gi|239749073 PREDICTED: hypothetical protein [Homo sapiens]            31   1.1  
gi|239743099 PREDICTED: hypothetical protein XP_002342754 [Homo ...    31   1.1  
gi|239508751 PREDICTED: hypothetical protein [Homo sapiens]            31   1.1  
gi|40806216 visual system homeobox 1 isoform b [Homo sapiens]          31   1.1  
gi|11056038 visual system homeobox 1 isoform a [Homo sapiens]          31   1.1  
gi|239757934 PREDICTED: hypothetical protein [Homo sapiens]            30   1.8  
gi|239756477 PREDICTED: similar to predicted protein [Homo sapiens]    30   1.8  
gi|239752441 PREDICTED: hypothetical protein XP_002348273 [Homo ...    30   1.8  
gi|239751001 PREDICTED: similar to predicted protein [Homo sapiens]    30   1.8  
gi|239745404 PREDICTED: hypothetical protein XP_002343488 [Homo ...    30   1.8  

>gi|239752904 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 282

 Score =  604 bits (1557), Expect = e-173
 Identities = 282/282 (100%), Positives = 282/282 (100%)

Query: 1   MVAQKTVKVPRTPFRRDPGETAPGHVRKSGNRALCTSAKFSHRAPGCRRACQGAGFLLDS 60
           MVAQKTVKVPRTPFRRDPGETAPGHVRKSGNRALCTSAKFSHRAPGCRRACQGAGFLLDS
Sbjct: 1   MVAQKTVKVPRTPFRRDPGETAPGHVRKSGNRALCTSAKFSHRAPGCRRACQGAGFLLDS 60

Query: 61  SAQFLLLLPPGLARGLPHSQGRPQSAAGFPSHTRLSTAEEESGLCEGPAAPPCLGKLTWL 120
           SAQFLLLLPPGLARGLPHSQGRPQSAAGFPSHTRLSTAEEESGLCEGPAAPPCLGKLTWL
Sbjct: 61  SAQFLLLLPPGLARGLPHSQGRPQSAAGFPSHTRLSTAEEESGLCEGPAAPPCLGKLTWL 120

Query: 121 QGEPTSQWPQRRSWQDWVMLGRGRCPQRSGGTEEPPPPNSCRHCSWRCWVPGPQERLQDV 180
           QGEPTSQWPQRRSWQDWVMLGRGRCPQRSGGTEEPPPPNSCRHCSWRCWVPGPQERLQDV
Sbjct: 121 QGEPTSQWPQRRSWQDWVMLGRGRCPQRSGGTEEPPPPNSCRHCSWRCWVPGPQERLQDV 180

Query: 181 HSPASQLQAPAGQGRGGDIDEMCGAAVAAEMEDTLDVGASEETRRCCVECRVQDPGGSTA 240
           HSPASQLQAPAGQGRGGDIDEMCGAAVAAEMEDTLDVGASEETRRCCVECRVQDPGGSTA
Sbjct: 181 HSPASQLQAPAGQGRGGDIDEMCGAAVAAEMEDTLDVGASEETRRCCVECRVQDPGGSTA 240

Query: 241 QFPLMMDRPPGPRSAAGQRLHSHQDACQSQGSHHSRGSGESE 282
           QFPLMMDRPPGPRSAAGQRLHSHQDACQSQGSHHSRGSGESE
Sbjct: 241 QFPLMMDRPPGPRSAAGQRLHSHQDACQSQGSHHSRGSGESE 282


>gi|239747453 PREDICTED: hypothetical protein XP_002347537 [Homo
           sapiens]
          Length = 282

 Score =  604 bits (1557), Expect = e-173
 Identities = 282/282 (100%), Positives = 282/282 (100%)

Query: 1   MVAQKTVKVPRTPFRRDPGETAPGHVRKSGNRALCTSAKFSHRAPGCRRACQGAGFLLDS 60
           MVAQKTVKVPRTPFRRDPGETAPGHVRKSGNRALCTSAKFSHRAPGCRRACQGAGFLLDS
Sbjct: 1   MVAQKTVKVPRTPFRRDPGETAPGHVRKSGNRALCTSAKFSHRAPGCRRACQGAGFLLDS 60

Query: 61  SAQFLLLLPPGLARGLPHSQGRPQSAAGFPSHTRLSTAEEESGLCEGPAAPPCLGKLTWL 120
           SAQFLLLLPPGLARGLPHSQGRPQSAAGFPSHTRLSTAEEESGLCEGPAAPPCLGKLTWL
Sbjct: 61  SAQFLLLLPPGLARGLPHSQGRPQSAAGFPSHTRLSTAEEESGLCEGPAAPPCLGKLTWL 120

Query: 121 QGEPTSQWPQRRSWQDWVMLGRGRCPQRSGGTEEPPPPNSCRHCSWRCWVPGPQERLQDV 180
           QGEPTSQWPQRRSWQDWVMLGRGRCPQRSGGTEEPPPPNSCRHCSWRCWVPGPQERLQDV
Sbjct: 121 QGEPTSQWPQRRSWQDWVMLGRGRCPQRSGGTEEPPPPNSCRHCSWRCWVPGPQERLQDV 180

Query: 181 HSPASQLQAPAGQGRGGDIDEMCGAAVAAEMEDTLDVGASEETRRCCVECRVQDPGGSTA 240
           HSPASQLQAPAGQGRGGDIDEMCGAAVAAEMEDTLDVGASEETRRCCVECRVQDPGGSTA
Sbjct: 181 HSPASQLQAPAGQGRGGDIDEMCGAAVAAEMEDTLDVGASEETRRCCVECRVQDPGGSTA 240

Query: 241 QFPLMMDRPPGPRSAAGQRLHSHQDACQSQGSHHSRGSGESE 282
           QFPLMMDRPPGPRSAAGQRLHSHQDACQSQGSHHSRGSGESE
Sbjct: 241 QFPLMMDRPPGPRSAAGQRLHSHQDACQSQGSHHSRGSGESE 282


>gi|239741327 PREDICTED: hypothetical protein XP_002342174 [Homo
           sapiens]
          Length = 282

 Score =  604 bits (1557), Expect = e-173
 Identities = 282/282 (100%), Positives = 282/282 (100%)

Query: 1   MVAQKTVKVPRTPFRRDPGETAPGHVRKSGNRALCTSAKFSHRAPGCRRACQGAGFLLDS 60
           MVAQKTVKVPRTPFRRDPGETAPGHVRKSGNRALCTSAKFSHRAPGCRRACQGAGFLLDS
Sbjct: 1   MVAQKTVKVPRTPFRRDPGETAPGHVRKSGNRALCTSAKFSHRAPGCRRACQGAGFLLDS 60

Query: 61  SAQFLLLLPPGLARGLPHSQGRPQSAAGFPSHTRLSTAEEESGLCEGPAAPPCLGKLTWL 120
           SAQFLLLLPPGLARGLPHSQGRPQSAAGFPSHTRLSTAEEESGLCEGPAAPPCLGKLTWL
Sbjct: 61  SAQFLLLLPPGLARGLPHSQGRPQSAAGFPSHTRLSTAEEESGLCEGPAAPPCLGKLTWL 120

Query: 121 QGEPTSQWPQRRSWQDWVMLGRGRCPQRSGGTEEPPPPNSCRHCSWRCWVPGPQERLQDV 180
           QGEPTSQWPQRRSWQDWVMLGRGRCPQRSGGTEEPPPPNSCRHCSWRCWVPGPQERLQDV
Sbjct: 121 QGEPTSQWPQRRSWQDWVMLGRGRCPQRSGGTEEPPPPNSCRHCSWRCWVPGPQERLQDV 180

Query: 181 HSPASQLQAPAGQGRGGDIDEMCGAAVAAEMEDTLDVGASEETRRCCVECRVQDPGGSTA 240
           HSPASQLQAPAGQGRGGDIDEMCGAAVAAEMEDTLDVGASEETRRCCVECRVQDPGGSTA
Sbjct: 181 HSPASQLQAPAGQGRGGDIDEMCGAAVAAEMEDTLDVGASEETRRCCVECRVQDPGGSTA 240

Query: 241 QFPLMMDRPPGPRSAAGQRLHSHQDACQSQGSHHSRGSGESE 282
           QFPLMMDRPPGPRSAAGQRLHSHQDACQSQGSHHSRGSGESE
Sbjct: 241 QFPLMMDRPPGPRSAAGQRLHSHQDACQSQGSHHSRGSGESE 282


>gi|23510413 sorting nexin 26 [Homo sapiens]
          Length = 1126

 Score = 37.4 bits (85), Expect = 0.015
 Identities = 30/97 (30%), Positives = 38/97 (39%), Gaps = 16/97 (16%)

Query: 82  RPQSAAGFPSHTRLSTAEEESGLCEG----------PAAPPCLGKLTWLQGEPTSQWPQR 131
           RP+S AG    TRL T EE     +G          P AP    +    +     + P  
Sbjct: 529 RPKSLAGSCPSTRLLTLEEAQARTQGRLGTPTEPTTPKAPASPAERRKGERGEKQRKPGG 588

Query: 132 RSWQDWVMLGRGRCPQRS------GGTEEPPPPNSCR 162
            SW+ +  LGRG    R       GGT  PP P+  R
Sbjct: 589 SSWKTFFALGRGPSVPRKKPLPWLGGTRAPPQPSGSR 625



 Score = 35.4 bits (80), Expect = 0.057
 Identities = 36/105 (34%), Positives = 42/105 (40%), Gaps = 16/105 (15%)

Query: 95  LSTAEEESGLCEGPAAPPCLGKLTWLQGEPTSQWPQRRSWQDWVMLGRGRCPQRSGGTEE 154
           L+ AE    + E  +   C G        P SQ P  RS    + L  G  P  + G+  
Sbjct: 741 LALAERAQQVAEQQSQQECGGT------PPASQSPFHRS----LSLEVGGEPLGTSGSG- 789

Query: 155 PPPPNSCRHCSWRCWVPGPQERLQDVHSPASQL--QAPAGQGRGG 197
            PPPNS  H     WVPGP   L    S  S L  Q P G  R G
Sbjct: 790 -PPPNSLAHPG--AWVPGPPPYLPRQQSDGSLLRSQRPMGTSRRG 831


>gi|28912912 NK6 transcription factor related, locus 2 [Homo
           sapiens]
          Length = 277

 Score = 35.4 bits (80), Expect = 0.057
 Identities = 37/112 (33%), Positives = 45/112 (40%), Gaps = 14/112 (12%)

Query: 50  ACQG-AGFLLDSSAQFLLLLPPGLARGLPHSQGRPQSAAG---FPSHTRLSTAEEESGLC 105
           A QG AGF   +       LP G   G+    GRP  AAG        RL+     +G+ 
Sbjct: 33  ALQGPAGFKAPALGGLGAQLPLGTPHGISDILGRPVGAAGGGLLGGLPRLNGLASSAGVY 92

Query: 106 EGPAAPPCLG---KLTWLQGEPTSQWP---QRRSWQDWVMLGRGRCPQRSGG 151
            GPAA    G    L  L G P   WP   Q   W+D  + G    P  +GG
Sbjct: 93  FGPAAAVARGYPKPLAELPGRPPIFWPGVVQGAPWRDPRLAG----PAPAGG 140


>gi|4557779 myocilin [Homo sapiens]
          Length = 504

 Score = 34.3 bits (77), Expect = 0.13
 Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 4/78 (5%)

Query: 133 SWQDWVMLGRGRCPQRSGGTEEPPPPNSCRHCSWRCWVPGPQERLQDV-HSPASQL--QA 189
           S Q+   L RG+CPQ +  T    PP S    +W       QE   ++   PAS++  ++
Sbjct: 173 SSQEVARLRRGQCPQ-TRDTARAVPPGSREVSTWNLDTLAFQELKSELTEVPASRILKES 231

Query: 190 PAGQGRGGDIDEMCGAAV 207
           P+G  R G+ D  CG  V
Sbjct: 232 PSGYLRSGEGDTGCGELV 249


>gi|156104862 ankyrin repeat domain 38 [Homo sapiens]
          Length = 995

 Score = 33.5 bits (75), Expect = 0.22
 Identities = 23/50 (46%), Positives = 25/50 (50%), Gaps = 5/50 (10%)

Query: 76  LPHSQGRPQ--SAAGFPSHTRLSTAEEESGLCEGPAAPPCLGKLTWLQGE 123
           L    GRPQ   A+  P+    S A EE GL  GP APP L     LQGE
Sbjct: 150 LTFGSGRPQLLRASSMPATLLHSRASEEPGLSLGPPAPPALPP---LQGE 196


>gi|84490388 R-spondin1 [Homo sapiens]
          Length = 263

 Score = 33.1 bits (74), Expect = 0.28
 Identities = 39/153 (25%), Positives = 55/153 (35%), Gaps = 29/153 (18%)

Query: 135 QDWVMLGRGRC----PQRSG---GTEEPPPPNSCRHCSWRCWVPGPQERLQDVHSPASQL 187
           ++ + L +GRC    P+ S    GT E   P  C    W  W             P S+ 
Sbjct: 115 KEGLYLHKGRCYPACPEGSSAANGTMECSSPAQCEMSEWSPW------------GPCSKK 162

Query: 188 QAPAGQGRGGDIDEMCGAAVAAEMEDTLDVGASEETRRC------CVECRVQDPGGS--T 239
           Q   G  RG   +E     + A + D      ++ETRRC      C E + +  GG    
Sbjct: 163 QQLCGFRRGS--EERTRRVLHAPVGDHAACSDTKETRRCTVRRVPCPEGQKRRKGGQGRR 220

Query: 240 AQFPLMMDRPPGPRSAAGQRLHSHQDACQSQGS 272
                 + R     + AG R    Q   Q QG+
Sbjct: 221 ENANRNLARKESKEAGAGSRRRKGQQQQQQQGT 253


>gi|153266907 gamma-glutamyltransferase 5 isoform c [Homo sapiens]
          Length = 554

 Score = 33.1 bits (74), Expect = 0.28
 Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 2/77 (2%)

Query: 144 RCPQRSGGTEEPPPPNSCRHCSWRCWVPGPQERLQDVHSPASQLQAPAGQGR--GGDIDE 201
           RCP+ SG T  P   +       RCW P P ER      P+  +    G     GG   E
Sbjct: 402 RCPRGSGTTPSPVSGDRVGGAPGRCWPPVPGERSPSSMVPSILINKAQGSKLVIGGAGGE 461

Query: 202 MCGAAVAAEMEDTLDVG 218
           +  +AVA  +   L +G
Sbjct: 462 LIISAVAQAIMSKLWLG 478


>gi|153266885 gamma-glutamyltransferase 5 isoform b [Homo sapiens]
          Length = 586

 Score = 33.1 bits (74), Expect = 0.28
 Identities = 24/77 (31%), Positives = 32/77 (41%), Gaps = 2/77 (2%)

Query: 144 RCPQRSGGTEEPPPPNSCRHCSWRCWVPGPQERLQDVHSPASQLQAPAGQGR--GGDIDE 201
           RCP+ SG T  P   +       RCW P P ER      P+  +    G     GG   E
Sbjct: 434 RCPRGSGTTPSPVSGDRVGGAPGRCWPPVPGERSPSSMVPSILINKAQGSKLVIGGAGGE 493

Query: 202 MCGAAVAAEMEDTLDVG 218
           +  +AVA  +   L +G
Sbjct: 494 LIISAVAQAIMSKLWLG 510


>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 1124

 Score = 32.7 bits (73), Expect = 0.37
 Identities = 51/230 (22%), Positives = 69/230 (30%), Gaps = 21/230 (9%)

Query: 9   VPRTPFRRDPGETAPGHVRKSGNRALCTSAKFSHRAPGCRRACQGAGFLLDSSAQFLLLL 68
           +P +P  + P +  P              A F  +AP    A      L     Q     
Sbjct: 776 LPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQ----A 831

Query: 69  PPGLARGLPHSQGRPQSAAGFPSHTRLSTAEEESG---------LCEGPAAPPCLGKLTW 119
           PP LA  L      P ++    +  R  T   ++          L  GP  PP     + 
Sbjct: 832 PPVLAAPLLQVPPSPPASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSST 891

Query: 120 LQGEPTSQWPQRRSWQDWVMLGRGRCPQRSGGTEEPPPPNSCRHCSWRCWVPGPQERLQD 179
           L G   +      +     + G    P+  G    PPP      C    W  GP   L  
Sbjct: 892 LSGPDLAGHSSSATSTPEELRGYDSGPE-GGAAASPPPDAELAACHPAAWSRGPAPPLAF 950

Query: 180 VHSPASQLQAPAGQGRGGDIDEMC------GAAVAAEMEDTLDVGASEET 223
             +P + L  P   G  G  D +C      G   A      LD G S  T
Sbjct: 951 RGAPGAPLPWPPATG-PGSADGLCTIYETEGPESATPAPGALDPGPSPGT 999


>gi|13569901 TSC22 domain family, member 4 [Homo sapiens]
          Length = 395

 Score = 32.7 bits (73), Expect = 0.37
 Identities = 42/155 (27%), Positives = 59/155 (38%), Gaps = 14/155 (9%)

Query: 77  PHSQGRP----QSAAGFPSHTRLSTAEEESGLCEGPAAPPC---LGKLTWLQGEPTSQWP 129
           PHS G      + A+G      L +  E + L  G   PP     G  +WL+  PTS  P
Sbjct: 102 PHSFGGLLEGIRGASGGAGGRSLDSRLELASLGLGAPTPPSGLSQGPTSWLRPPPTSPGP 161

Query: 130 QRRSWQDWVMLGRGRCPQRSGGTEEPPPPNSCRHCSWRCWVP--GPQERLQDVHSPASQL 187
           Q RS+     LG+   P ++   +   PP S      R   P  G         +P   L
Sbjct: 162 QARSFTGG--LGQLVVPSKA---KAEKPPLSASSPQQRPPEPETGESAGTSRAATPLPSL 216

Query: 188 QAPAGQGRGGDIDEMCGAAVAAEMEDTLDVGASEE 222
           +  A  G  G          A +M   +++GA EE
Sbjct: 217 RVEAEAGGSGARTPPLSRRKAVDMRLRMELGAPEE 251


>gi|169183882 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 295

 Score = 32.3 bits (72), Expect = 0.48
 Identities = 54/197 (27%), Positives = 69/197 (35%), Gaps = 54/197 (27%)

Query: 17  DPGETAPGH-VRKSGNRALCTSAKFSHRAPGCRRACQGAGFLLDSSAQFLLLLPP----- 70
           D G    GH V  +G+  +       HRAP     C GAG             PP     
Sbjct: 45  DAGSECVGHRVPDAGSECV------GHRAPDAGSVCGGAG-------------PPMRGQW 85

Query: 71  GLARGLPHSQGRPQSAAGFPSHTRLSTAEEESGLCEGPAAPPCLGKLTWLQGEPTSQ--- 127
           G   G P  +G+    AG P            G C   A PP  G++ W  G P  Q   
Sbjct: 86  GWGAGSP-MRGQSVWGAGPPMR----------GQCVWRAGPPMRGQIVWSAGPPRVQGTL 134

Query: 128 --WPQRRSWQDWVMLGRGRCPQRSGGTEEPPPPN--SC---RHCSWRCWVPGPQERLQDV 180
              P R        L + R P R  G   P P +  +C    H +     PG QE  +  
Sbjct: 135 VHCPTRH-------LSQRRGPGRQCGNSLPEPSSMLTCPQQPHRATSPAAPGLQECPRTG 187

Query: 181 HS-PASQLQAPAGQGRG 196
            S P+ QL +   +G G
Sbjct: 188 PSQPSMQLPSYPEEGSG 204


>gi|239754626 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 103

 Score = 32.3 bits (72), Expect = 0.48
 Identities = 28/100 (28%), Positives = 38/100 (38%), Gaps = 14/100 (14%)

Query: 167 RCWVPGPQERLQDVHSPASQLQAPAGQGRGGDIDEMCGAAVAAEMEDTLDVGASE----- 221
           R W PGP     D+    S+ +A     RG       G  V AE +   D+G +      
Sbjct: 9   RTWAPGPSNAALDLTLKGSKDKASGAGARG------AGREVVAEAKGRRDLGLARVCPRR 62

Query: 222 --ETRRCCVECRVQDPGGSTAQFPLMMDRPPGPRSAAGQR 259
               RRC V  R  D  G      L + R PGP  +  ++
Sbjct: 63  PGAGRRCTVSPREADL-GPEKDTRLDLPRRPGPGPSGAEQ 101


>gi|122937472 bicaudal C homolog 1 [Homo sapiens]
          Length = 974

 Score = 32.0 bits (71), Expect = 0.63
 Identities = 25/121 (20%), Positives = 51/121 (42%), Gaps = 14/121 (11%)

Query: 148 RSGGTEEPPPPNSCRHCSWRCWVPGPQERLQDVHSPASQLQAPAGQGRGGDIDE-MCGAA 206
           ++ G+E+  P +S            P E   D        ++P+  G  GD+ + MC + 
Sbjct: 604 QTSGSEQTSPKSS------------PTEGCNDAFVEVGMPRSPSHSGNAGDLKQMMCPSK 651

Query: 207 VAAEMEDTLD-VGASEETRRCCVECRVQDPGGSTAQFPLMMDRPPGPRSAAGQRLHSHQD 265
           V+     T++ +  ++ +     +  + DP  S  + PL   + PG   AA +   + Q+
Sbjct: 652 VSCAKRQTVELLQGTKNSHLHSTDRLLSDPELSATESPLADKKAPGSERAAERAAAAQQN 711

Query: 266 A 266
           +
Sbjct: 712 S 712


>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
           sapiens]
          Length = 855

 Score = 32.0 bits (71), Expect = 0.63
 Identities = 32/126 (25%), Positives = 40/126 (31%), Gaps = 8/126 (6%)

Query: 104 LCEGPAAPPCLGKLTWLQGEPTSQWPQRRSWQDWVMLGRGRCPQRSGGTEEPPPPNSCRH 163
           L  GP  PP     + L G   +      +     + G    P+  G    PPP      
Sbjct: 607 LAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPE-GGAAASPPPDAELAA 665

Query: 164 CSWRCWVPGPQERLQDVHSPASQLQAPAGQGRGGDIDEMC------GAAVAAEMEDTLDV 217
           C    W  GP   L    +P + L  P   G  G  D +C      G   A      LD 
Sbjct: 666 CHPAAWSRGPAPPLAFRGAPGAPLPWPPATG-PGSADGLCTIYETEGPESATPAPGALDP 724

Query: 218 GASEET 223
           G S  T
Sbjct: 725 GPSPGT 730


>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
           sapiens]
          Length = 816

 Score = 32.0 bits (71), Expect = 0.63
 Identities = 32/126 (25%), Positives = 40/126 (31%), Gaps = 8/126 (6%)

Query: 104 LCEGPAAPPCLGKLTWLQGEPTSQWPQRRSWQDWVMLGRGRCPQRSGGTEEPPPPNSCRH 163
           L  GP  PP     + L G   +      +     + G    P+  G    PPP      
Sbjct: 568 LAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPE-GGAAASPPPDAELAA 626

Query: 164 CSWRCWVPGPQERLQDVHSPASQLQAPAGQGRGGDIDEMC------GAAVAAEMEDTLDV 217
           C    W  GP   L    +P + L  P   G  G  D +C      G   A      LD 
Sbjct: 627 CHPAAWSRGPAPPLAFRGAPGAPLPWPPATG-PGSADGLCTIYETEGPESATPAPGALDP 685

Query: 218 GASEET 223
           G S  T
Sbjct: 686 GPSPGT 691


>gi|5174543 myocyte enhancer factor 2B isoform b [Homo sapiens]
          Length = 365

 Score = 31.6 bits (70), Expect = 0.82
 Identities = 34/122 (27%), Positives = 45/122 (36%), Gaps = 12/122 (9%)

Query: 108 PAAPPCLGKLTWLQGEPTSQWPQRRSWQDWVMLGRGRCPQRSGGTEEPPPPNSCRHCSWR 167
           P  PP +G   W +  P    P RR  Q    L     P  +  T   P P  C      
Sbjct: 252 PGGPP-VGAEAWARRVPQPAAPPRRPPQSASSLSASLRPPGAPATFLRPSPIPCSS---- 306

Query: 168 CWVPGPQERLQDVHSPASQLQAP-AGQGR---GGDIDEMCGAAVAAEMEDTLDVGASEET 223
              PGP + L  +  P +    P AG GR   GG   E       A  + T    +SE+T
Sbjct: 307 ---PGPWQSLCGLGPPCAGCPWPTAGPGRRSPGGTSPERSPGTARARGDPTSLQASSEKT 363

Query: 224 RR 225
           ++
Sbjct: 364 QQ 365


>gi|239754512 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 556

 Score = 31.6 bits (70), Expect = 0.82
 Identities = 48/153 (31%), Positives = 55/153 (35%), Gaps = 39/153 (25%)

Query: 123 EPTSQWPQRRSWQDWVMLGR----GRCPQRSGGTEEPP------PPNSCRHCSWRCWVPG 172
           E   Q   R   Q W   GR    G  P R G    PP      PP   R    R W PG
Sbjct: 415 EAPEQGKPRLPPQAWHDQGRDAPPGPTPARRGLPRPPPPPPPPLPPPPRREPCHRAW-PG 473

Query: 173 PQERLQDVHSPASQLQAPAGQGRGGDIDEMCGAAVAAEMEDTLDVGASEETRRCCVECR- 231
           P + L ++  P  Q  AP G+                E E T   G S+ETR    ECR 
Sbjct: 474 PAQPLGNLRPPVQQ-SAPGGR------------KCVKEGEAT---GPSKETRG-PKECRQ 516

Query: 232 ----VQDPGGSTAQFPLMMDRPPGPRSAAGQRL 260
               V   GG+       M   PGP +   QRL
Sbjct: 517 VGEAVLGEGGAP------MQSSPGPPNRCLQRL 543


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 31.6 bits (70), Expect = 0.82
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 8/69 (11%)

Query: 127 QWPQRRSWQDWVMLGRGRCPQRSGGTEEPPPPNSCRHCSWRCWVPGPQERLQDVHSPASQ 186
           QW + RS Q W   GR R PQR G +  P  P   R  + +      + R +      S 
Sbjct: 512 QWRRSRSAQRW---GRSRSPQRRGRSRSPQRPGWSRSRNTQ-----RRGRSRSARRGRSH 563

Query: 187 LQAPAGQGR 195
            ++PA +GR
Sbjct: 564 SRSPATRGR 572


>gi|239749073 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 884

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 46/148 (31%), Positives = 53/148 (35%), Gaps = 29/148 (19%)

Query: 123 EPTSQWPQRRSWQDWVMLGR----GRCPQRSGGTEEPP------PPNSCRHCSWRCWVPG 172
           E   Q   R   Q W   GR    G  P R G    PP      PP   R    R W PG
Sbjct: 743 EAPEQGKPRLPPQAWHDQGRDAPPGPTPARRGLPRPPPPPPPPLPPPPRREPCHRAW-PG 801

Query: 173 PQERLQDVHSPASQLQAPAGQGRGGDIDEMCGAAVAAEMEDTLDVGASEETRRCCVECRV 232
           P + L ++  P  Q  AP G+                E E T   G S+ETR    ECR 
Sbjct: 802 PAQPLGNLRPPVQQ-SAPGGR------------KCVKEGEAT---GPSKETRG-PKECR- 843

Query: 233 QDPGGSTAQFPLMMDRPPGPRSAAGQRL 260
           Q       +    M   PGP +   QRL
Sbjct: 844 QVGEAVLGEGEAPMQSSPGPPNRCLQRL 871


>gi|239743099 PREDICTED: hypothetical protein XP_002342754 [Homo
           sapiens]
          Length = 884

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 46/148 (31%), Positives = 53/148 (35%), Gaps = 29/148 (19%)

Query: 123 EPTSQWPQRRSWQDWVMLGR----GRCPQRSGGTEEPP------PPNSCRHCSWRCWVPG 172
           E   Q   R   Q W   GR    G  P R G    PP      PP   R    R W PG
Sbjct: 743 EAPEQGKPRLPPQAWHDQGRDAPPGPTPARRGLPRPPPPPPPPLPPPPRREPCHRAW-PG 801

Query: 173 PQERLQDVHSPASQLQAPAGQGRGGDIDEMCGAAVAAEMEDTLDVGASEETRRCCVECRV 232
           P + L ++  P  Q  AP G+                E E T   G S+ETR    ECR 
Sbjct: 802 PAQPLGNLRPPVQQ-SAPGGR------------KCVKEGEAT---GPSKETRG-PKECR- 843

Query: 233 QDPGGSTAQFPLMMDRPPGPRSAAGQRL 260
           Q       +    M   PGP +   QRL
Sbjct: 844 QVGEAVLGEGEAPMQSSPGPPNRCLQRL 871


>gi|239508751 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 884

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 46/148 (31%), Positives = 53/148 (35%), Gaps = 29/148 (19%)

Query: 123 EPTSQWPQRRSWQDWVMLGR----GRCPQRSGGTEEPP------PPNSCRHCSWRCWVPG 172
           E   Q   R   Q W   GR    G  P R G    PP      PP   R    R W PG
Sbjct: 743 EAPEQGKPRLPPQAWHDQGRDAPPGPTPARRGLPRPPPPPPPPLPPPPRREPCHRAW-PG 801

Query: 173 PQERLQDVHSPASQLQAPAGQGRGGDIDEMCGAAVAAEMEDTLDVGASEETRRCCVECRV 232
           P + L ++  P  Q  AP G+                E E T   G S+ETR    ECR 
Sbjct: 802 PAQPLGNLRPPVQQ-SAPGGR------------KCVKEGEAT---GPSKETRG-PKECR- 843

Query: 233 QDPGGSTAQFPLMMDRPPGPRSAAGQRL 260
           Q       +    M   PGP +   QRL
Sbjct: 844 QVGEAVLGEGEAPMQSSPGPPNRCLQRL 871


>gi|40806216 visual system homeobox 1 isoform b [Homo sapiens]
          Length = 239

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 43/176 (24%), Positives = 57/176 (32%), Gaps = 30/176 (17%)

Query: 53  GAGFLLDSSAQFLLLLPPGLARGLPHSQGRPQSAA-----GFPSHTRLSTAEEESGLCEG 107
           G   L D       L+P G  RG      RP+  A     G  +         +   CEG
Sbjct: 3   GRDSLSDGRTSSRALVPGGSPRG-----SRPRGFAITDLLGLEAELPAPAGPGQGSGCEG 57

Query: 108 PAAPPCLGKLTWLQGEPTSQWPQRRSWQDWVMLGRGRCPQRSG---GTEEPPPPNSCRHC 164
           PA  PC G                    D   L RG  P   G   G    PP  +   C
Sbjct: 58  PAVAPCPG-----------------PGLDGSSLARGALPLGLGLLCGFGTQPPAAARAPC 100

Query: 165 SWRCWVPGPQERLQDVHSPASQLQAPAGQGRGGDIDEMCGAAVAAEMEDTLDVGAS 220
                VP    R  +  +P +  + P   GR    D +  +   ++ ED  D+ AS
Sbjct: 101 LLLADVPFLPPRGPEPAAPLAPSRPPPALGRQKRSDSVSTSDEDSQSEDRNDLKAS 156


>gi|11056038 visual system homeobox 1 isoform a [Homo sapiens]
          Length = 365

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 43/176 (24%), Positives = 57/176 (32%), Gaps = 30/176 (17%)

Query: 53  GAGFLLDSSAQFLLLLPPGLARGLPHSQGRPQSAA-----GFPSHTRLSTAEEESGLCEG 107
           G   L D       L+P G  RG      RP+  A     G  +         +   CEG
Sbjct: 3   GRDSLSDGRTSSRALVPGGSPRG-----SRPRGFAITDLLGLEAELPAPAGPGQGSGCEG 57

Query: 108 PAAPPCLGKLTWLQGEPTSQWPQRRSWQDWVMLGRGRCPQRSG---GTEEPPPPNSCRHC 164
           PA  PC G                    D   L RG  P   G   G    PP  +   C
Sbjct: 58  PAVAPCPG-----------------PGLDGSSLARGALPLGLGLLCGFGTQPPAAARAPC 100

Query: 165 SWRCWVPGPQERLQDVHSPASQLQAPAGQGRGGDIDEMCGAAVAAEMEDTLDVGAS 220
                VP    R  +  +P +  + P   GR    D +  +   ++ ED  D+ AS
Sbjct: 101 LLLADVPFLPPRGPEPAAPLAPSRPPPALGRQKRSDSVSTSDEDSQSEDRNDLKAS 156


>gi|239757934 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 77

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 5/34 (14%)

Query: 175 ERLQDVHSPASQLQAPAGQGRG-----GDIDEMC 203
           E LQD H+PA+    P G G G     GD++ +C
Sbjct: 18  EELQDQHAPAAARGGPCGMGPGCSSTSGDLEALC 51


>gi|239756477 PREDICTED: similar to predicted protein [Homo sapiens]
          Length = 291

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 3/44 (6%)

Query: 69  PPGLARGLPHSQGRPQSAAGFPSHTRLSTAEEESGLCEGPAAPP 112
           PPG   G    + R +    FPSHTR +   +     +GP +PP
Sbjct: 245 PPGERTGAGAGEPRARGGQEFPSHTRSNRTPQNG---DGPRSPP 285


>gi|239752441 PREDICTED: hypothetical protein XP_002348273 [Homo
           sapiens]
          Length = 77

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 14/34 (41%), Positives = 19/34 (55%), Gaps = 5/34 (14%)

Query: 175 ERLQDVHSPASQLQAPAGQGRG-----GDIDEMC 203
           E LQD H+PA+    P G G G     GD++ +C
Sbjct: 18  EELQDQHAPAAARGGPCGMGPGCSSTSGDLEALC 51


>gi|239751001 PREDICTED: similar to predicted protein [Homo sapiens]
          Length = 291

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 3/44 (6%)

Query: 69  PPGLARGLPHSQGRPQSAAGFPSHTRLSTAEEESGLCEGPAAPP 112
           PPG   G    + R +    FPSHTR +   +     +GP +PP
Sbjct: 245 PPGERTGAGAGEPRARGGQEFPSHTRSNRTPQNG---DGPRSPP 285


>gi|239745404 PREDICTED: hypothetical protein XP_002343488 [Homo
           sapiens]
          Length = 183

 Score = 30.4 bits (67), Expect = 1.8
 Identities = 15/44 (34%), Positives = 21/44 (47%), Gaps = 3/44 (6%)

Query: 69  PPGLARGLPHSQGRPQSAAGFPSHTRLSTAEEESGLCEGPAAPP 112
           PPG   G    + R +    FPSHTR +   +     +GP +PP
Sbjct: 137 PPGERTGAGAGEPRARGGQEFPSHTRSNRTPQNG---DGPRSPP 177


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.133    0.437 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,971,158
Number of Sequences: 37866
Number of extensions: 968683
Number of successful extensions: 2951
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 76
Number of HSP's that attempted gapping in prelim test: 2880
Number of HSP's gapped (non-prelim): 147
length of query: 282
length of database: 18,247,518
effective HSP length: 101
effective length of query: 181
effective length of database: 14,423,052
effective search space: 2610572412
effective search space used: 2610572412
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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