Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239741128
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239741128 PREDICTED: hypothetical protein XP_002342116 [Homo
sapiens]
(132 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239741128 PREDICTED: hypothetical protein XP_002342116 [Homo ... 271 8e-74
gi|239747304 PREDICTED: hypothetical protein XP_002346416 [Homo ... 234 1e-62
gi|239748716 PREDICTED: hypothetical protein XP_002346782 [Homo ... 40 7e-04
gi|239747100 PREDICTED: hypothetical protein XP_002344493 [Homo ... 37 0.005
gi|31982931 SLC2A4 regulator [Homo sapiens] 37 0.006
gi|239755398 PREDICTED: hypothetical protein [Homo sapiens] 36 0.010
gi|48762934 alpha 2 type I collagen [Homo sapiens] 35 0.013
gi|239756278 PREDICTED: hypothetical protein XP_002344871 [Homo ... 35 0.013
gi|239750809 PREDICTED: hypothetical protein XP_002347567 [Homo ... 35 0.013
gi|239745169 PREDICTED: hypothetical protein XP_002343388 [Homo ... 35 0.013
gi|239755571 PREDICTED: hypothetical protein [Homo sapiens] 35 0.017
gi|239744417 PREDICTED: similar to hCG2023245 [Homo sapiens] 35 0.017
gi|12707580 paired-like homeobox 2b [Homo sapiens] 35 0.017
gi|42544153 leukocyte receptor tyrosine kinase isoform 1 precurs... 35 0.017
gi|239742745 PREDICTED: hypothetical protein XP_002342616 [Homo ... 35 0.022
gi|24308326 BR serine/threonine kinase 1 [Homo sapiens] 35 0.022
gi|62865637 AT rich interactive domain 3C (BRIGHT- like) [Homo s... 35 0.022
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 35 0.022
gi|239753508 PREDICTED: hypothetical protein [Homo sapiens] 34 0.038
gi|239748157 PREDICTED: hypothetical protein [Homo sapiens] 34 0.038
gi|239742055 PREDICTED: hypothetical protein XP_002342401 [Homo ... 34 0.038
gi|92859871 SMAD family member 6 isoform 1 [Homo sapiens] 34 0.038
gi|20127580 BTB (POZ) domain containing 2 [Homo sapiens] 34 0.038
gi|27262638 sperm associated antigen 1 [Homo sapiens] 34 0.038
gi|27262636 sperm associated antigen 1 [Homo sapiens] 34 0.038
gi|13994287 BTE-binding protein 4 [Homo sapiens] 33 0.050
gi|27436957 membrane associated guanylate kinase, WW and PDZ dom... 33 0.050
gi|239756880 PREDICTED: hypothetical protein [Homo sapiens] 33 0.065
gi|239753353 PREDICTED: hypothetical protein [Homo sapiens] 33 0.065
gi|239751374 PREDICTED: hypothetical protein XP_002347830 [Homo ... 33 0.065
>gi|239741128 PREDICTED: hypothetical protein XP_002342116 [Homo
sapiens]
Length = 132
Score = 271 bits (694), Expect = 8e-74
Identities = 132/132 (100%), Positives = 132/132 (100%)
Query: 1 MYLRPYRDSLHFAQSNDSLMVARGENPRSGRRERGARGAGGAGNRAPRPSAAPTCGPGQA 60
MYLRPYRDSLHFAQSNDSLMVARGENPRSGRRERGARGAGGAGNRAPRPSAAPTCGPGQA
Sbjct: 1 MYLRPYRDSLHFAQSNDSLMVARGENPRSGRRERGARGAGGAGNRAPRPSAAPTCGPGQA 60
Query: 61 GAERAAGEAADCRRTVWASGSAAPTPPRGRVTLSPALIQPGGGRFDSAVMSLSAGTKVFS 120
GAERAAGEAADCRRTVWASGSAAPTPPRGRVTLSPALIQPGGGRFDSAVMSLSAGTKVFS
Sbjct: 61 GAERAAGEAADCRRTVWASGSAAPTPPRGRVTLSPALIQPGGGRFDSAVMSLSAGTKVFS 120
Query: 121 ENMGRREDPSPP 132
ENMGRREDPSPP
Sbjct: 121 ENMGRREDPSPP 132
>gi|239747304 PREDICTED: hypothetical protein XP_002346416 [Homo
sapiens]
Length = 124
Score = 234 bits (597), Expect = 1e-62
Identities = 119/132 (90%), Positives = 120/132 (90%), Gaps = 8/132 (6%)
Query: 1 MYLRPYRDSLHFAQSNDSLMVARGENPRSGRRERGARGAGGAGNRAPRPSAAPTCGPGQA 60
MYLRPYRDSLHFAQSNDSLMVARGENPRSGRRERGARGAGGAGNRAPRPSAAPTCGPGQA
Sbjct: 1 MYLRPYRDSLHFAQSNDSLMVARGENPRSGRRERGARGAGGAGNRAPRPSAAPTCGPGQA 60
Query: 61 GAERAAGEAADCRRTVWASGSAAPTPPRGRVTLSPALIQPGGGRFDSAVMSLSAGTKVFS 120
GAERAAGEAADCRRT G+ RVTLSPALIQPGGGRFDSAVMSLSAGTKVFS
Sbjct: 61 GAERAAGEAADCRRTEGRVGA--------RVTLSPALIQPGGGRFDSAVMSLSAGTKVFS 112
Query: 121 ENMGRREDPSPP 132
ENMGRREDPSPP
Sbjct: 113 ENMGRREDPSPP 124
>gi|239748716 PREDICTED: hypothetical protein XP_002346782 [Homo
sapiens]
Length = 267
Score = 39.7 bits (91), Expect = 7e-04
Identities = 40/162 (24%), Positives = 60/162 (37%), Gaps = 34/162 (20%)
Query: 5 PYRDSLHFAQSNDSLMVARGENPRSGRRERGARGAGGAGNRAPRPSAAPTCGPGQAGAER 64
P R ++ AQ + + RG R +R G G +PRPSAA GP Q A R
Sbjct: 43 PRRRTVRTAQPKERSPLRRGSCARGEKRPPGPTGGQWRWGVSPRPSAASATGPPQDRAAR 102
Query: 65 A---------AGEAADCRRTVWASGSAAP------------------TPPRGRVTLS--- 94
AG ++ ++ + GSAA P R R T +
Sbjct: 103 GCELREGRAEAGHSSTSQKDTLSKGSAAAATAVAAGKHLAVPETRGGVPARRRETANPPG 162
Query: 95 PALIQPGGGRFDSAVM----SLSAGTKVFSENMGRREDPSPP 132
P +PGG F + + A + + + ++ P PP
Sbjct: 163 PGRARPGGSPFGHRPLLQPRQIFAPLQAITNQVRPQQRPEPP 204
>gi|239747100 PREDICTED: hypothetical protein XP_002344493 [Homo
sapiens]
Length = 300
Score = 37.0 bits (84), Expect = 0.005
Identities = 31/80 (38%), Positives = 35/80 (43%), Gaps = 5/80 (6%)
Query: 28 RSGRRERGARGAGGAGNRAPR--PSAAPTCGPGQAGAERAAGEAADCR-RTVWASGSAAP 84
R RE ARG A + PS AP G E AA AA R R A+GS P
Sbjct: 213 REEAREERARGCSEASRTSSDSGPSRAPAARV--VGGEAAATAAARARPRAPLAAGSPVP 270
Query: 85 TPPRGRVTLSPALIQPGGGR 104
P+ S A +QPG GR
Sbjct: 271 VRPQDAAARSAAGMQPGHGR 290
>gi|31982931 SLC2A4 regulator [Homo sapiens]
Length = 387
Score = 36.6 bits (83), Expect = 0.006
Identities = 31/108 (28%), Positives = 44/108 (40%), Gaps = 12/108 (11%)
Query: 22 ARGENPRSGRRERGARGAGGAGNRA-----PRPSAAPTCGPGQAGAERAAGEAADCRRT- 75
A G +P + R E A G G RA P P + G G AG E A + ++ R +
Sbjct: 8 AAGRDPSALRAEAPWLRAEGPGPRAAPVTVPTPPQGSSVGGGFAGLEFARPQESEPRASD 67
Query: 76 -----VWASGSAAPTPPRGRVTLSPALIQPGGGRFDSAVMSLSAGTKV 118
W +A P P + + PG R D VM+ +A T +
Sbjct: 68 LGAPRTWTGAAAGPRTPSAHIPVPAQRATPGKARLDE-VMAAAALTSL 114
>gi|239755398 PREDICTED: hypothetical protein [Homo sapiens]
Length = 359
Score = 35.8 bits (81), Expect = 0.010
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 31 RRERGARGAGGAGNRAPRPSAAPTCGPGQAGAERAAGEAADCRRTVWASGSAAPTPPR 88
RR GARG G G R +A +C G+ AAG A +W +GS P PR
Sbjct: 49 RRPSGARGGGDPGRPGARAFSAASCQAGRPWRCGAAGGRA--AAALWRAGSPNPENPR 104
>gi|48762934 alpha 2 type I collagen [Homo sapiens]
Length = 1366
Score = 35.4 bits (80), Expect = 0.013
Identities = 33/79 (41%), Positives = 37/79 (46%), Gaps = 5/79 (6%)
Query: 23 RGENPRSGRRERGARGAGGAGNRAPRPSAAPTCGPGQAGAERAAGEAADCRRTVWASGSA 82
RGE GR GARGA GA AP P+ A T G+AGA AG A R + G
Sbjct: 663 RGEIGNPGRD--GARGAPGAVG-APGPAGA-TGDRGEAGAAGPAGPAGP-RGSPGERGEV 717
Query: 83 APTPPRGRVTLSPALIQPG 101
P P G + A QPG
Sbjct: 718 GPAGPNGFAGPAGAAGQPG 736
Score = 28.1 bits (61), Expect = 2.1
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 8/58 (13%)
Query: 33 ERGARGAGG-AGNRAPRPSAAPTCGPGQAGAERAAGEAADCRRTVWASGSAAPTPPRG 89
E G G+ G +GN+ SA P PG +G E G + +GSA P P G
Sbjct: 347 EPGPAGSKGESGNKGEPGSAGPQGPPGPSGEEGKRGPNGE-------AGSAGPPGPPG 397
Score = 26.9 bits (58), Expect = 4.7
Identities = 23/80 (28%), Positives = 30/80 (37%), Gaps = 15/80 (18%)
Query: 11 HFAQSNDSLMVARGENPRSGRRERGARGAGGAGNRAPRPSAAPTCGPGQAGAERAAGEAA 70
+FA D V G P RG GA GA PG G + AGE
Sbjct: 76 NFAAQYDGKGVGLGPGPMGLMGPRGPPGAAGA--------------PGPQGFQGPAGEPG 121
Query: 71 DCRRTVWASGSAAPTPPRGR 90
+ +T +G+ P P G+
Sbjct: 122 EPGQT-GPAGARGPAGPPGK 140
>gi|239756278 PREDICTED: hypothetical protein XP_002344871 [Homo
sapiens]
Length = 238
Score = 35.4 bits (80), Expect = 0.013
Identities = 33/116 (28%), Positives = 45/116 (38%), Gaps = 10/116 (8%)
Query: 23 RGENPRSGRRERGAR----GAGGAGNRAPRPSAAPTCGPGQAGAERAAGEAADCRRTVWA 78
RG +P G R G GA + +P S +PT PG+ G A +
Sbjct: 117 RGASPPPGEEGRAGAWRSPGEAGAADGSPHVSTSPTPAPGRRGGREARLRPMPTPSWIPV 176
Query: 79 SG--SAAPTPPRGRVTLSPALIQPGGGRFDSAVMSLSAGTKVFSENMGRREDPSPP 132
S AA + P R P+L+Q GG R + + + F GR P PP
Sbjct: 177 SSHKKAARSEPAER---RPSLLQ-GGQRGPAHSTGMETQKEAFDGQGGRSPLPLPP 228
Score = 31.6 bits (70), Expect = 0.19
Identities = 22/66 (33%), Positives = 27/66 (40%)
Query: 23 RGENPRSGRRERGARGAGGAGNRAPRPSAAPTCGPGQAGAERAAGEAADCRRTVWASGSA 82
R P E G A APR ++ P G+AGA R+ GEA + S S
Sbjct: 92 RDPAPVMSHGEAGTPAPRAARLGAPRGASPPPGEEGRAGAWRSPGEAGAADGSPHVSTSP 151
Query: 83 APTPPR 88
P P R
Sbjct: 152 TPAPGR 157
>gi|239750809 PREDICTED: hypothetical protein XP_002347567 [Homo
sapiens]
Length = 238
Score = 35.4 bits (80), Expect = 0.013
Identities = 33/116 (28%), Positives = 45/116 (38%), Gaps = 10/116 (8%)
Query: 23 RGENPRSGRRERGAR----GAGGAGNRAPRPSAAPTCGPGQAGAERAAGEAADCRRTVWA 78
RG +P G R G GA + +P S +PT PG+ G A +
Sbjct: 117 RGASPPPGEEGRAGAWRSPGEAGAADGSPHVSTSPTPAPGRRGGREARLRPMPTPSWIPV 176
Query: 79 SG--SAAPTPPRGRVTLSPALIQPGGGRFDSAVMSLSAGTKVFSENMGRREDPSPP 132
S AA + P R P+L+Q GG R + + + F GR P PP
Sbjct: 177 SSHKKAARSEPAER---RPSLLQ-GGQRGPAHSTGMETQKEAFDGQGGRSPLPLPP 228
Score = 31.6 bits (70), Expect = 0.19
Identities = 22/66 (33%), Positives = 27/66 (40%)
Query: 23 RGENPRSGRRERGARGAGGAGNRAPRPSAAPTCGPGQAGAERAAGEAADCRRTVWASGSA 82
R P E G A APR ++ P G+AGA R+ GEA + S S
Sbjct: 92 RDPAPVMSHGEAGTPAPRAARLGAPRGASPPPGEEGRAGAWRSPGEAGAADGSPHVSTSP 151
Query: 83 APTPPR 88
P P R
Sbjct: 152 TPAPGR 157
>gi|239745169 PREDICTED: hypothetical protein XP_002343388 [Homo
sapiens]
Length = 238
Score = 35.4 bits (80), Expect = 0.013
Identities = 33/116 (28%), Positives = 45/116 (38%), Gaps = 10/116 (8%)
Query: 23 RGENPRSGRRERGAR----GAGGAGNRAPRPSAAPTCGPGQAGAERAAGEAADCRRTVWA 78
RG +P G R G GA + +P S +PT PG+ G A +
Sbjct: 117 RGASPPPGEEGRAGAWRSPGEAGAADGSPHVSTSPTPAPGRRGGREARLRPMPTPSWIPV 176
Query: 79 SG--SAAPTPPRGRVTLSPALIQPGGGRFDSAVMSLSAGTKVFSENMGRREDPSPP 132
S AA + P R P+L+Q GG R + + + F GR P PP
Sbjct: 177 SSHKKAARSEPAER---RPSLLQ-GGQRGPAHSTGMETQKEAFDGQGGRSPLPLPP 228
Score = 31.6 bits (70), Expect = 0.19
Identities = 22/66 (33%), Positives = 27/66 (40%)
Query: 23 RGENPRSGRRERGARGAGGAGNRAPRPSAAPTCGPGQAGAERAAGEAADCRRTVWASGSA 82
R P E G A APR ++ P G+AGA R+ GEA + S S
Sbjct: 92 RDPAPVMSHGEAGTPAPRAARLGAPRGASPPPGEEGRAGAWRSPGEAGAADGSPHVSTSP 151
Query: 83 APTPPR 88
P P R
Sbjct: 152 TPAPGR 157
>gi|239755571 PREDICTED: hypothetical protein [Homo sapiens]
Length = 261
Score = 35.0 bits (79), Expect = 0.017
Identities = 36/120 (30%), Positives = 44/120 (36%), Gaps = 15/120 (12%)
Query: 14 QSNDSLMVARGEN----PRSGRRERGARGAGGAGNRAPRPSAAPTCGPGQAGAERAAGEA 69
Q+ DS + +G P G GA G A RP+ PT P + A R E
Sbjct: 39 QAGDSDCLGQGRRAQRRPGPGVSAVGASGQQRAPESNERPAEEPTPAPMPSSAPRGPTEP 98
Query: 70 ADCRRTVWASGSAAPTPPRGRVTLSPALIQPGGGRFDSAVMSLSAGTKVFSENMGRREDP 129
A RR A AP P PG GR A+ S S +K + GR P
Sbjct: 99 A-LRRPSSADRPLAPGPSS----------SPGAGRAPGAMASPSGSSKATGKPRGRDGRP 147
>gi|239744417 PREDICTED: similar to hCG2023245 [Homo sapiens]
Length = 364
Score = 35.0 bits (79), Expect = 0.017
Identities = 36/120 (30%), Positives = 44/120 (36%), Gaps = 15/120 (12%)
Query: 14 QSNDSLMVARGEN----PRSGRRERGARGAGGAGNRAPRPSAAPTCGPGQAGAERAAGEA 69
Q+ DS + +G P G GA G A RP+ PT P + A R E
Sbjct: 142 QAGDSDCLGQGRRAQRRPGPGVSAVGASGQQRAPESNERPAEEPTPAPMPSSAPRGPTEP 201
Query: 70 ADCRRTVWASGSAAPTPPRGRVTLSPALIQPGGGRFDSAVMSLSAGTKVFSENMGRREDP 129
A RR A AP P PG GR A+ S S +K + GR P
Sbjct: 202 A-LRRPSSADRPLAPGPSS----------SPGAGRAPGAMASPSGSSKATGKPRGRDGRP 250
>gi|12707580 paired-like homeobox 2b [Homo sapiens]
Length = 314
Score = 35.0 bits (79), Expect = 0.017
Identities = 27/79 (34%), Positives = 32/79 (40%), Gaps = 4/79 (5%)
Query: 38 GAGGAGNRAPRPSAAP-TCGPGQAGAERAAGEAADCRRTVWASGSAAPTPPRGRVTLSPA 96
GA G G P P+ AP GPG G E G AA A+ +AA G + +
Sbjct: 209 GANGGGGGGPSPAGAPGAAGPGGPGGEPGKGGAAAAAAAAAAAAAAAAAAAAGGLAAAGG 268
Query: 97 LIQ---PGGGRFDSAVMSL 112
Q PG G S SL
Sbjct: 269 PGQGWAPGPGPITSIPDSL 287
Score = 30.0 bits (66), Expect = 0.55
Identities = 27/79 (34%), Positives = 31/79 (39%), Gaps = 6/79 (7%)
Query: 35 GARGAGGAGNRAPRPSAAPTCGPGQAGAERAAGEAADCRRTVWASGSA-APTPPRGRVTL 93
GA G GG G + AA A A AA AA G AP P G +T
Sbjct: 225 GAAGPGGPGGEPGKGGAAAAAAAAAAAAAAAAAAAAGGLAAAGGPGQGWAPGP--GPITS 282
Query: 94 SPALIQPGGGRFDSAVMSL 112
P + GG F S + SL
Sbjct: 283 IPDSL---GGPFASVLSSL 298
>gi|42544153 leukocyte receptor tyrosine kinase isoform 1 precursor
[Homo sapiens]
Length = 864
Score = 35.0 bits (79), Expect = 0.017
Identities = 29/78 (37%), Positives = 36/78 (46%), Gaps = 5/78 (6%)
Query: 2 YLRPYRDSLHFAQSNDSLMVARGENPRSGRRERGARGAGGAGNRAPRPSAAPTCGPGQAG 61
YLRP RD Q++ + R E P SG R A G GG +RAP P A + Q G
Sbjct: 239 YLRP-RDRGR-TQASPEKLENRSEAPGSGGRGGAAGGGGGWTSRAPSPQAGRSL---QEG 293
Query: 62 AERAAGEAADCRRTVWAS 79
AE G + WA+
Sbjct: 294 AEGGQGCSEAWATLGWAA 311
>gi|239742745 PREDICTED: hypothetical protein XP_002342616 [Homo
sapiens]
Length = 248
Score = 34.7 bits (78), Expect = 0.022
Identities = 36/144 (25%), Positives = 52/144 (36%), Gaps = 34/144 (23%)
Query: 23 RGENPRSGRRERGARGAGGAGNRAPRPSAAPTCGPGQAGAERA---------AGEAADCR 73
RG R +R G G +PRPSAA GP Q A R AG ++ +
Sbjct: 42 RGSCARGEKRPPGPTGGQWRWGVSPRPSAASATGPPQDRAARGCELREGRAEAGHSSTSQ 101
Query: 74 RTVWASGSAAP------------------TPPRGRVTLS---PALIQPGGGRFDSAVM-- 110
+ + GSAA P R R T + P +PGG F +
Sbjct: 102 KDTLSKGSAAAATAVAAGKHLAVPETRGGVPARRRETANPPGPGRARPGGSPFGHRPLLQ 161
Query: 111 --SLSAGTKVFSENMGRREDPSPP 132
+ A + + + ++ P PP
Sbjct: 162 PRQIFAPLQAITNQVRPQQRPEPP 185
>gi|24308326 BR serine/threonine kinase 1 [Homo sapiens]
Length = 778
Score = 34.7 bits (78), Expect = 0.022
Identities = 29/74 (39%), Positives = 34/74 (45%), Gaps = 15/74 (20%)
Query: 34 RGARGAGGAGNRAPRPSAAPTCGPGQAGAERAAGEAA--DCRRTVWASGSAAP--TPPRG 89
RG RG GGAG + P PSA T PG G+ R++G T AS + P TPP
Sbjct: 481 RGPRG-GGAGEQPPPPSARSTPLPGPPGSPRSSGGTPLHSPLHTPRASPTGTPGTTPPP- 538
Query: 90 RVTLSPALIQPGGG 103
PGGG
Sbjct: 539 ---------SPGGG 543
>gi|62865637 AT rich interactive domain 3C (BRIGHT- like) [Homo
sapiens]
Length = 412
Score = 34.7 bits (78), Expect = 0.022
Identities = 31/115 (26%), Positives = 40/115 (34%), Gaps = 8/115 (6%)
Query: 2 YLRPYRDSLHFAQSNDSLMVARGENPRSGRRER-GARGAGGAGNRAPRPSAAPTCGPGQA 60
YL PY S L A N R GRR+ A G PR + P GPG A
Sbjct: 196 YLYPYECETRALSSPGELQAAIDSNRREGRRQAYTATPLFGLAGPPPRGAQDPALGPGPA 255
Query: 61 GAERAAGEAADCRRTVWASGSAAPTPPRGRVTLSPALIQPGGGRFDSAVMSLSAG 115
+ A GS + P LSP+ I+ + ++L G
Sbjct: 256 PPATQSSPGP-------AQGSTSGLPAHACAQLSPSPIKKEESGIPNPCLALPVG 303
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 34.7 bits (78), Expect = 0.022
Identities = 34/118 (28%), Positives = 41/118 (34%), Gaps = 8/118 (6%)
Query: 22 ARGENPRSG-------RRERGARGAGGAGNRAPRPSAAPTCGPGQAGAERAAGEAADCRR 74
AR + PR G R RGA A A P P+ P P A A A AA
Sbjct: 97 ARVQPPRRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAA 156
Query: 75 TVWASGSAAPTPPRGRVTLSPALIQPGGGRFDSAVMSLSAGTKVFSENMGRREDPSPP 132
T S A PR + +P P AV + + + RE P PP
Sbjct: 157 TAPPSPGPAQPGPRAQ-RAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPP 213
>gi|239753508 PREDICTED: hypothetical protein [Homo sapiens]
Length = 123
Score = 33.9 bits (76), Expect = 0.038
Identities = 27/76 (35%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Query: 28 RSGRRERGARGAGGAGNRAPRPSAA--PTCGPGQAGAERAAG-EAADCRRTVWASGSAAP 84
R+GRRE G G G G RA +AA P G G E AA A C A
Sbjct: 19 RAGRREAGGPGHNGGGGRARWAAAARTPALGGGGGSVELAADFHAILCPANRLTDRGDAS 78
Query: 85 TPPRGRVTLSPALIQP 100
PP + AL+ P
Sbjct: 79 PPPTPQPFWPTALLSP 94
>gi|239748157 PREDICTED: hypothetical protein [Homo sapiens]
Length = 128
Score = 33.9 bits (76), Expect = 0.038
Identities = 27/76 (35%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Query: 28 RSGRRERGARGAGGAGNRAPRPSAA--PTCGPGQAGAERAAG-EAADCRRTVWASGSAAP 84
R+GRRE G G G G RA +AA P G G E AA A C A
Sbjct: 19 RAGRREAGGPGHNGGGGRARWAAAARTPALGGGGGSVELAADFHAILCPANRLTDRGDAS 78
Query: 85 TPPRGRVTLSPALIQP 100
PP + AL+ P
Sbjct: 79 PPPTPQPFWPTALLSP 94
>gi|239742055 PREDICTED: hypothetical protein XP_002342401 [Homo
sapiens]
Length = 128
Score = 33.9 bits (76), Expect = 0.038
Identities = 27/76 (35%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Query: 28 RSGRRERGARGAGGAGNRAPRPSAA--PTCGPGQAGAERAAG-EAADCRRTVWASGSAAP 84
R+GRRE G G G G RA +AA P G G E AA A C A
Sbjct: 19 RAGRREAGGPGHNGGGGRARWAAAARTPALGGGGGSVELAADFHAILCPANRLTDRGDAS 78
Query: 85 TPPRGRVTLSPALIQP 100
PP + AL+ P
Sbjct: 79 PPPTPQPFWPTALLSP 94
>gi|92859871 SMAD family member 6 isoform 1 [Homo sapiens]
Length = 496
Score = 33.9 bits (76), Expect = 0.038
Identities = 28/91 (30%), Positives = 38/91 (41%), Gaps = 14/91 (15%)
Query: 27 PRSGRRERGARGAGGAGNR-----APRPSAAPTCGPGQAGAERAAG------EAADCRRT 75
PR R G RGA GAG R PRP + P G G + + A +DC
Sbjct: 65 PRRPRDAVGQRGAQGAGRRRRAGGPPRPMSEPGAGAGSSLLDVAEPGGPGWLPESDCETV 124
Query: 76 ---VWASGSAAPTPPRGRVTLSPALIQPGGG 103
+++ AA P L+ A ++P GG
Sbjct: 125 TCCLFSERDAAGAPRDASDPLAGAALEPAGG 155
>gi|20127580 BTB (POZ) domain containing 2 [Homo sapiens]
Length = 525
Score = 33.9 bits (76), Expect = 0.038
Identities = 24/68 (35%), Positives = 27/68 (39%), Gaps = 5/68 (7%)
Query: 20 MVARGENPRSGRRERGARGAGGAGNRAPRPSAAPTCGPGQAGAERAAGEAADCRRTVWAS 79
M A G R+ G G G+ P +AA T PG A A AA AA A
Sbjct: 1 MAAGGSGGRASCPPGVGVGPGTGGSPGPSANAAATPAPGNAAAAAAAAAAAAA-----AP 55
Query: 80 GSAAPTPP 87
G P PP
Sbjct: 56 GPTPPAPP 63
>gi|27262638 sperm associated antigen 1 [Homo sapiens]
Length = 926
Score = 33.9 bits (76), Expect = 0.038
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Query: 24 GENPRSGRRERGARGAGGAGNRAPRPSAAPTCGPGQAGAERAAGEAADCRRTVWASG--- 80
G+ P G +RG GA R+PR ++A G A G+ A+ + + G
Sbjct: 396 GKRPARGAPQRGQTPEAGADKRSPRRASAAAAAGGGATGHPGGGQGAENPAGLKSQGNEL 455
Query: 81 --SAAPTPPRGRVTLSPALIQPGG 102
S G+ + + AL++P G
Sbjct: 456 FRSGQFAEAAGKYSAAIALLEPAG 479
>gi|27262636 sperm associated antigen 1 [Homo sapiens]
Length = 926
Score = 33.9 bits (76), Expect = 0.038
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 5/84 (5%)
Query: 24 GENPRSGRRERGARGAGGAGNRAPRPSAAPTCGPGQAGAERAAGEAADCRRTVWASG--- 80
G+ P G +RG GA R+PR ++A G A G+ A+ + + G
Sbjct: 396 GKRPARGAPQRGQTPEAGADKRSPRRASAAAAAGGGATGHPGGGQGAENPAGLKSQGNEL 455
Query: 81 --SAAPTPPRGRVTLSPALIQPGG 102
S G+ + + AL++P G
Sbjct: 456 FRSGQFAEAAGKYSAAIALLEPAG 479
>gi|13994287 BTE-binding protein 4 [Homo sapiens]
Length = 252
Score = 33.5 bits (75), Expect = 0.050
Identities = 34/96 (35%), Positives = 41/96 (42%), Gaps = 12/96 (12%)
Query: 22 ARGENPRSGRRERGARGAGGAGNRAPRPSAAPTCGPGQAGAER--AAGEAADCRRTVWAS 79
A G + R+ RRE + G G P P AA GPG A A AA AD R A+
Sbjct: 38 AAGLDVRAARREAASPGTPGP---PPPPPAASGPGPGAAAAPHLLAASILADLRGGPGAA 94
Query: 80 -GSAAPTPPRGRVTLSPALIQPGGGRFDSAVMSLSA 114
G A+P + S A P GR A S +A
Sbjct: 95 PGGASP------ASSSSAASSPSSGRAPGAAPSAAA 124
>gi|27436957 membrane associated guanylate kinase, WW and PDZ domain
containing 2 [Homo sapiens]
Length = 1455
Score = 33.5 bits (75), Expect = 0.050
Identities = 34/117 (29%), Positives = 41/117 (35%), Gaps = 20/117 (17%)
Query: 23 RGENPRSGRRERGARGAGGAGNRAPRPSAAPTCGPGQAGAERAAGEAADCRRTVWASGSA 82
R +P+ R R GG G A+ PG A A +AAD R A G
Sbjct: 1316 RSASPQRAARPRLEEAPGGQGRPEAGRPASEARAPGLA-----AADAADAAR---AGGKE 1367
Query: 83 APTPPRGRVT-------LSPALIQPGGGRFDSAVMSLSAGTKVFSENMGRREDPSPP 132
AP G +PA PGGG + AG + G R P PP
Sbjct: 1368 APRAAAGSELCRREGPGAAPAFAGPGGGGSGALEAEGRAGARA-----GPRPGPRPP 1419
>gi|239756880 PREDICTED: hypothetical protein [Homo sapiens]
Length = 376
Score = 33.1 bits (74), Expect = 0.065
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 29 SGRRERGARGAGGAGNRAPRPSAAPTCGPGQAGAERAAGEAADCRRTVWASGSAAPTPPR 88
SG E+G+R G+ PRP A + A+ + + + R +A + APT PR
Sbjct: 290 SGGCEKGSRSVSGSRRSEPRPPAGLGDARAASPADTVSDDVSRRHRGCFAGRARAPTGPR 349
Query: 89 GR 90
R
Sbjct: 350 RR 351
Score = 26.2 bits (56), Expect = 8.0
Identities = 20/69 (28%), Positives = 27/69 (39%), Gaps = 6/69 (8%)
Query: 24 GENPRSGRRERGARGAGGAGNRAPRPSAAPTCGPGQAGAERAAGEAADCR---RTVWASG 80
G +P R+ G GAG SA P G + +R + C R+V S
Sbjct: 248 GASPVLRLRDVGTERESGAGCLR---SAPPRAGDARQQTQRCQSPSGGCEKGSRSVSGSR 304
Query: 81 SAAPTPPRG 89
+ P PP G
Sbjct: 305 RSEPRPPAG 313
>gi|239753353 PREDICTED: hypothetical protein [Homo sapiens]
Length = 448
Score = 33.1 bits (74), Expect = 0.065
Identities = 35/114 (30%), Positives = 45/114 (39%), Gaps = 5/114 (4%)
Query: 23 RGENPRSGRRERGARGAGGAGNRAPRPSAAPTCGPGQAGAERAAGEAADCRRTVWASGSA 82
R E R +G RG G AG +AA PG+ + A + R AS S
Sbjct: 10 RKERSGGAARVKGPRGGGRAGGTGRSITAASELSPGERARRKKPQSAREASRAWEASISR 69
Query: 83 AP--TPPRG-RVTLSPA--LIQPGGGRFDSAVMSLSAGTKVFSENMGRREDPSP 131
P +P RG R T SP Q GG +S L + + F E + SP
Sbjct: 70 DPALSPGRGRRQTGSPGGEGRQVRGGARNSRDPGLRSEMRPFREAFAKLLSGSP 123
>gi|239751374 PREDICTED: hypothetical protein XP_002347830 [Homo
sapiens]
Length = 376
Score = 33.1 bits (74), Expect = 0.065
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 29 SGRRERGARGAGGAGNRAPRPSAAPTCGPGQAGAERAAGEAADCRRTVWASGSAAPTPPR 88
SG E+G+R G+ PRP A + A+ + + + R +A + APT PR
Sbjct: 290 SGGCEKGSRSVSGSRRSEPRPPAGLGDARAASPADTVSDDVSRRHRGCFAGRARAPTGPR 349
Query: 89 GR 90
R
Sbjct: 350 RR 351
Score = 26.2 bits (56), Expect = 8.0
Identities = 20/69 (28%), Positives = 27/69 (39%), Gaps = 6/69 (8%)
Query: 24 GENPRSGRRERGARGAGGAGNRAPRPSAAPTCGPGQAGAERAAGEAADCR---RTVWASG 80
G +P R+ G GAG SA P G + +R + C R+V S
Sbjct: 248 GASPVLRLRDVGTERESGAGCLR---SAPPRAGDARQQTQRCQSPSGGCEKGSRSVSGSR 304
Query: 81 SAAPTPPRG 89
+ P PP G
Sbjct: 305 RSEPRPPAG 313
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.131 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,635,406
Number of Sequences: 37866
Number of extensions: 385223
Number of successful extensions: 3369
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 417
Number of HSP's that attempted gapping in prelim test: 2644
Number of HSP's gapped (non-prelim): 1067
length of query: 132
length of database: 18,247,518
effective HSP length: 91
effective length of query: 41
effective length of database: 14,801,712
effective search space: 606870192
effective search space used: 606870192
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.