Search of human proteins with 239509033

Search of human proteins with 239509033

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239509033 PREDICTED: hypothetical protein [Homo sapiens]
         (140 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239743345 PREDICTED: hypothetical protein XP_002342795 [Homo ...   291   1e-79
gi|239509033 PREDICTED: hypothetical protein [Homo sapiens]           291   1e-79
gi|31543140 Usher syndrome 1C binding protein 1 [Homo sapiens]         37   0.004
gi|151301053 RNA binding motif protein 33 [Homo sapiens]               36   0.012
gi|223633944 hypothetical protein LOC389762 [Homo sapiens]             34   0.034
gi|223671858 hypothetical protein LOC389761 [Homo sapiens]             34   0.034
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]            33   0.058
gi|169208912 PREDICTED: hypothetical protein [Homo sapiens]            32   0.17 
gi|239754873 PREDICTED: similar to hCG2040393 [Homo sapiens]           32   0.17 
gi|169208667 PREDICTED: hypothetical protein [Homo sapiens]            32   0.17 
gi|239749412 PREDICTED: hypothetical protein XP_002347031 [Homo ...    32   0.17 
gi|239743547 PREDICTED: hypothetical protein XP_002342883 [Homo ...    32   0.17 
gi|27436957 membrane associated guanylate kinase, WW and PDZ dom...    32   0.17 
gi|122937424 one cut homeobox 3 [Homo sapiens]                         32   0.17 
gi|237820622 pleckstrin homology domain containing, family N mem...    31   0.29 
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom...    31   0.38 
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom...    31   0.38 
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap...    31   0.38 
gi|8924248 SRY-box 18 [Homo sapiens]                                   31   0.38 
gi|21040324 B-cell lymphoma 6 protein isoform 1 [Homo sapiens]         30   0.49 
gi|197927147 B-cell lymphoma 6 protein isoform 2 [Homo sapiens]        30   0.49 
gi|195927002 B-cell lymphoma 6 protein isoform 1 [Homo sapiens]        30   0.49 
gi|7657116 glyceraldehyde-3-phosphate dehydrogenase, spermatogen...    30   0.49 
gi|72256200 B-cell CLL/lymphoma 9 [Homo sapiens]                       30   0.49 
gi|196115158 CDKN1A interacting zinc finger protein 1 isoform 4 ...    30   0.49 
gi|196115153 CDKN1A interacting zinc finger protein 1 isoform 3 ...    30   0.49 
gi|196115141 CDKN1A interacting zinc finger protein 1 isoform 2 ...    30   0.49 
gi|40255047 pleckstrin homology domain containing, family H (wit...    30   0.49 
gi|229094128 active breakpoint cluster region-related  protein i...    30   0.65 
gi|239756116 PREDICTED: hypothetical protein [Homo sapiens]            30   0.65 

>gi|239743345 PREDICTED: hypothetical protein XP_002342795 [Homo
           sapiens]
          Length = 140

 Score =  291 bits (745), Expect = 1e-79
 Identities = 140/140 (100%), Positives = 140/140 (100%)

Query: 1   MPLVASEPRHQQPRLLGTLVSIILHPPACPVAETEPQEQTESAAHPHSHPKPDQIGPDCE 60
           MPLVASEPRHQQPRLLGTLVSIILHPPACPVAETEPQEQTESAAHPHSHPKPDQIGPDCE
Sbjct: 1   MPLVASEPRHQQPRLLGTLVSIILHPPACPVAETEPQEQTESAAHPHSHPKPDQIGPDCE 60

Query: 61  PPRLGISAAGLGSRQEKARKGGQKRSPAATQVAWREPEARMHSSKGVAPGWLWSDCGGKR 120
           PPRLGISAAGLGSRQEKARKGGQKRSPAATQVAWREPEARMHSSKGVAPGWLWSDCGGKR
Sbjct: 61  PPRLGISAAGLGSRQEKARKGGQKRSPAATQVAWREPEARMHSSKGVAPGWLWSDCGGKR 120

Query: 121 RLRSEGGAGKVASVVARAAA 140
           RLRSEGGAGKVASVVARAAA
Sbjct: 121 RLRSEGGAGKVASVVARAAA 140


>gi|239509033 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 140

 Score =  291 bits (745), Expect = 1e-79
 Identities = 140/140 (100%), Positives = 140/140 (100%)

Query: 1   MPLVASEPRHQQPRLLGTLVSIILHPPACPVAETEPQEQTESAAHPHSHPKPDQIGPDCE 60
           MPLVASEPRHQQPRLLGTLVSIILHPPACPVAETEPQEQTESAAHPHSHPKPDQIGPDCE
Sbjct: 1   MPLVASEPRHQQPRLLGTLVSIILHPPACPVAETEPQEQTESAAHPHSHPKPDQIGPDCE 60

Query: 61  PPRLGISAAGLGSRQEKARKGGQKRSPAATQVAWREPEARMHSSKGVAPGWLWSDCGGKR 120
           PPRLGISAAGLGSRQEKARKGGQKRSPAATQVAWREPEARMHSSKGVAPGWLWSDCGGKR
Sbjct: 61  PPRLGISAAGLGSRQEKARKGGQKRSPAATQVAWREPEARMHSSKGVAPGWLWSDCGGKR 120

Query: 121 RLRSEGGAGKVASVVARAAA 140
           RLRSEGGAGKVASVVARAAA
Sbjct: 121 RLRSEGGAGKVASVVARAAA 140


>gi|31543140 Usher syndrome 1C binding protein 1 [Homo sapiens]
          Length = 703

 Score = 37.4 bits (85), Expect = 0.004
 Identities = 29/90 (32%), Positives = 39/90 (43%), Gaps = 9/90 (10%)

Query: 30  PVAET-EPQEQTESAAHPHSHPKPDQIGPDCEPPRLGISAAGLGSRQEKARKGGQKRSPA 88
           PVAE+ E  E    ++ P   P P   G +   P   +S  GLGSR +K   GG  R  A
Sbjct: 23  PVAESSEEVEAASGSSKPSFAPPPVSSGLEQLGPMEEVSGQGLGSRTDKKMDGGSGRELA 82

Query: 89  ATQ--------VAWREPEARMHSSKGVAPG 110
           +           A + PEA +   + V PG
Sbjct: 83  SAPEVPHKPAVEAHQAPEAALQYKETVPPG 112


>gi|151301053 RNA binding motif protein 33 [Homo sapiens]
          Length = 1170

 Score = 35.8 bits (81), Expect = 0.012
 Identities = 21/57 (36%), Positives = 25/57 (43%), Gaps = 7/57 (12%)

Query: 8   PRHQQPRLLGTLVSIILHPPACPVAETEPQ--EQTESAAHPHSHPKPDQIGPDCEPP 62
           P H QP L G L     HPP  P  + +PQ  +Q     H   H  P Q  P  +PP
Sbjct: 571 PTHTQPNLQGPL-----HPPLPPPHQPQPQQPQQQPPPQHQPPHQPPHQPPPQHQPP 622


>gi|223633944 hypothetical protein LOC389762 [Homo sapiens]
          Length = 917

 Score = 34.3 bits (77), Expect = 0.034
 Identities = 25/112 (22%), Positives = 41/112 (36%), Gaps = 15/112 (13%)

Query: 39  QTESAAHPHSHPKPDQIGP-DCE--------------PPRLGISAAGLGSRQEKARKGGQ 83
           +T+S A  H  P P  + P DC               P  L +  +G  S      KG  
Sbjct: 285 RTDSCARHHGPPTPSALPPEDCTVTQSKSNLTVLKTFPEMLSLGGSGGSSTSAPTTKGID 344

Query: 84  KRSPAATQVAWREPEARMHSSKGVAPGWLWSDCGGKRRLRSEGGAGKVASVV 135
              PA+++ +W +P A+   S    P     +        +  G   VA+++
Sbjct: 345 HSCPASSEFSWWQPHAKDSFSSNFVPSDFMEELLTLHSSEASLGGHSVANII 396


>gi|223671858 hypothetical protein LOC389761 [Homo sapiens]
          Length = 917

 Score = 34.3 bits (77), Expect = 0.034
 Identities = 25/112 (22%), Positives = 41/112 (36%), Gaps = 15/112 (13%)

Query: 39  QTESAAHPHSHPKPDQIGP-DCE--------------PPRLGISAAGLGSRQEKARKGGQ 83
           +T+S A  H  P P  + P DC               P  L +  +G  S      KG  
Sbjct: 285 RTDSCARHHGPPTPSALPPEDCTVTQSKSNLTVLKTFPEMLSLGGSGGSSTSAPTTKGID 344

Query: 84  KRSPAATQVAWREPEARMHSSKGVAPGWLWSDCGGKRRLRSEGGAGKVASVV 135
              PA+++ +W +P A+   S    P     +        +  G   VA+++
Sbjct: 345 HSCPASSEFSWWQPHAKDSFSSNFVPSDFMEELLTLHSSEASLGGHSVANII 396


>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 819

 Score = 33.5 bits (75), Expect = 0.058
 Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 13/92 (14%)

Query: 52  PDQIGPDCEPPRLGISAAG---LGS-----RQEKARKGGQKRSPAATQVAWREPEARMHS 103
           P ++  +   P L  +AAG   LGS     R++KA  GG+K      + A    EAR H 
Sbjct: 30  PVELAAESAAPALSAAAAGVKILGSGDKKLRRQKAAAGGKKARLRGQKGAVAGKEARQHW 89

Query: 104 SKGVAPGWLWSDCGGKRR-----LRSEGGAGK 130
            K    G   +  GG+++      +S GG G+
Sbjct: 90  QKAAGAGGAENRGGGEQKAAAAGTKSLGGRGR 121


>gi|169208912 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 266

 Score = 32.0 bits (71), Expect = 0.17
 Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 6/85 (7%)

Query: 57  PDCEPPRLGISAAGLGSRQEKARKGGQKRS-PAATQVAWREPEARMHSSKGVAPGWLWSD 115
           P   PPR G+S      R+   R G  ++S P   +       AR+  ++ V PG  W  
Sbjct: 163 PSAGPPRPGLSVR----RRRPLRPGAVRKSQPPGLRRQTAGGRARLGGARAVDPGTGWGH 218

Query: 116 CGGKRRLRSEGGAGKVASVVARAAA 140
           C   RR R E  + + A V     A
Sbjct: 219 CACSRR-RGERRSRRAAGVPGELGA 242


>gi|239754873 PREDICTED: similar to hCG2040393 [Homo sapiens]
          Length = 333

 Score = 32.0 bits (71), Expect = 0.17
 Identities = 29/104 (27%), Positives = 40/104 (38%), Gaps = 12/104 (11%)

Query: 34  TEPQEQTESAAHPHSHPKPDQIGPDC--------EPPRLGISAAGLGSRQEKARKGGQKR 85
           T P+ Q    + P SHP+   +            EPP LG + AG   RQ+    G + R
Sbjct: 61  TAPRTQQPKPSGPSSHPREPPLPGAVTGGSLHFQEPPPLGAATAGSRHRQKPPSPGSRHR 120

Query: 86  SPAATQVAWREPEARMHSSKGVAPGWLWSDCGGKRRLRSEGGAG 129
                  A     +R H  +  +PG   +   G   LRS G  G
Sbjct: 121 WEPPPPGAATATGSR-HRREPPSPG---ATTAGSCHLRSSGSTG 160


>gi|169208667 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 266

 Score = 32.0 bits (71), Expect = 0.17
 Identities = 25/85 (29%), Positives = 35/85 (41%), Gaps = 6/85 (7%)

Query: 57  PDCEPPRLGISAAGLGSRQEKARKGGQKRS-PAATQVAWREPEARMHSSKGVAPGWLWSD 115
           P   PPR G+S      R+   R G  ++S P   +       AR+  ++ V PG  W  
Sbjct: 163 PSAGPPRPGLSVR----RRRPLRPGAVRKSQPPGLRRQTAGGRARLGGARAVDPGTGWGH 218

Query: 116 CGGKRRLRSEGGAGKVASVVARAAA 140
           C   RR R E  + + A V     A
Sbjct: 219 CACSRR-RGERRSRRAAGVPGELGA 242


>gi|239749412 PREDICTED: hypothetical protein XP_002347031 [Homo
           sapiens]
          Length = 333

 Score = 32.0 bits (71), Expect = 0.17
 Identities = 29/104 (27%), Positives = 40/104 (38%), Gaps = 12/104 (11%)

Query: 34  TEPQEQTESAAHPHSHPKPDQIGPDC--------EPPRLGISAAGLGSRQEKARKGGQKR 85
           T P+ Q    + P SHP+   +            EPP LG + AG   RQ+    G + R
Sbjct: 61  TAPRTQQPKPSGPSSHPREPPLPGAVTGGSLHFQEPPPLGAATAGSRHRQKPPSPGSRHR 120

Query: 86  SPAATQVAWREPEARMHSSKGVAPGWLWSDCGGKRRLRSEGGAG 129
                  A     +R H  +  +PG   +   G   LRS G  G
Sbjct: 121 WEPPPPGAATATGSR-HRREPPSPG---ATTAGSCHLRSSGSTG 160


>gi|239743547 PREDICTED: hypothetical protein XP_002342883 [Homo
           sapiens]
          Length = 333

 Score = 32.0 bits (71), Expect = 0.17
 Identities = 29/104 (27%), Positives = 40/104 (38%), Gaps = 12/104 (11%)

Query: 34  TEPQEQTESAAHPHSHPKPDQIGPDC--------EPPRLGISAAGLGSRQEKARKGGQKR 85
           T P+ Q    + P SHP+   +            EPP LG + AG   RQ+    G + R
Sbjct: 61  TAPRTQQPKPSGPSSHPREPPLPGAVTGGSLHFQEPPPLGAATAGSRHRQKPPSPGSRHR 120

Query: 86  SPAATQVAWREPEARMHSSKGVAPGWLWSDCGGKRRLRSEGGAG 129
                  A     +R H  +  +PG   +   G   LRS G  G
Sbjct: 121 WEPPPPGAATATGSR-HRREPPSPG---ATTAGSCHLRSSGSTG 160


>gi|27436957 membrane associated guanylate kinase, WW and PDZ domain
            containing 2 [Homo sapiens]
          Length = 1455

 Score = 32.0 bits (71), Expect = 0.17
 Identities = 32/113 (28%), Positives = 46/113 (40%), Gaps = 18/113 (15%)

Query: 28   ACPVAETEPQEQTESAAHPHSHPKP-------DQIGPDCEPPRLGISAAGLGSRQ--EKA 78
            AC   +    EQ E +A P    +P        Q  P+   P     A GL +    + A
Sbjct: 1302 ACGQKKQRLGEQRERSASPQRAARPRLEEAPGGQGRPEAGRPASEARAPGLAAADAADAA 1361

Query: 79   RKGGQK--RSPAATQVAWREPEARMHSSKGVAPGWLWSDCGGKRRLRSEGGAG 129
            R GG++  R+ A +++  RE         G AP +     GG   L +EG AG
Sbjct: 1362 RAGGKEAPRAAAGSELCRRE-------GPGAAPAFAGPGGGGSGALEAEGRAG 1407


>gi|122937424 one cut homeobox 3 [Homo sapiens]
          Length = 494

 Score = 32.0 bits (71), Expect = 0.17
 Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 10/70 (14%)

Query: 11  QQPRLLGTLVSI--ILH-PPACPVAETEPQEQTESAA------HPHSHPKPDQIGPDCEP 61
           + P L GT  ++  + H PP   VA+   Q    +A       HPH+HP P    P   P
Sbjct: 97  EAPGLGGTYTTLTPLQHLPPLAAVADKFHQHAAAAAVAGAHGGHPHAHPHPAAAPPPPPP 156

Query: 62  P-RLGISAAG 70
           P RL  S +G
Sbjct: 157 PQRLAASVSG 166


>gi|237820622 pleckstrin homology domain containing, family N member
           1 isoform a [Homo sapiens]
          Length = 611

 Score = 31.2 bits (69), Expect = 0.29
 Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 10/80 (12%)

Query: 24  LHPPACPVAETEPQEQTESAAHPHSHPKPDQIGPDCEPPRLGISAAGLGSRQEKARKGGQ 83
           L PP+   + + P+    S     S   PDQ   D          A +G R+ + R+ G 
Sbjct: 356 LAPPSTRTSHSLPESSVPSTVGCSSQHTPDQANSD---------RASIGRRRTELRRSGS 406

Query: 84  KRSPAA-TQVAWREPEARMH 102
            RSP +  +   R P   +H
Sbjct: 407 SRSPGSKARAEGRGPVTPLH 426


>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
           sapiens]
          Length = 1188

 Score = 30.8 bits (68), Expect = 0.38
 Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 5/81 (6%)

Query: 26  PPACPVAETEPQEQTESAAHPHSHPKPDQIGPDCEPPRLGI----SAAGLGSRQEKARKG 81
           PPA P+A   P      A  P +   P  +G    PP  G+    S   L  RQ +A + 
Sbjct: 216 PPAPPLAFLAPPPPPVPAPAPPAPASPHTVGTRLFPPG-GVTKWKSDVALNGRQAEATRA 274

Query: 82  GQKRSPAATQVAWREPEARMH 102
              RSPA  + +   P    H
Sbjct: 275 SPPRSPAEPKGSALGPNPEPH 295


>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
           sapiens]
          Length = 1188

 Score = 30.8 bits (68), Expect = 0.38
 Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 5/81 (6%)

Query: 26  PPACPVAETEPQEQTESAAHPHSHPKPDQIGPDCEPPRLGI----SAAGLGSRQEKARKG 81
           PPA P+A   P      A  P +   P  +G    PP  G+    S   L  RQ +A + 
Sbjct: 216 PPAPPLAFLAPPPPPVPAPAPPAPASPHTVGTRLFPPG-GVTKWKSDVALNGRQAEATRA 274

Query: 82  GQKRSPAATQVAWREPEARMH 102
              RSPA  + +   P    H
Sbjct: 275 SPPRSPAEPKGSALGPNPEPH 295


>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
           sapiens]
          Length = 1188

 Score = 30.8 bits (68), Expect = 0.38
 Identities = 24/81 (29%), Positives = 32/81 (39%), Gaps = 5/81 (6%)

Query: 26  PPACPVAETEPQEQTESAAHPHSHPKPDQIGPDCEPPRLGI----SAAGLGSRQEKARKG 81
           PPA P+A   P      A  P +   P  +G    PP  G+    S   L  RQ +A + 
Sbjct: 216 PPAPPLAFLAPPPPPVPAPAPPAPASPHTVGTRLFPPG-GVTKWKSDVALNGRQAEATRA 274

Query: 82  GQKRSPAATQVAWREPEARMH 102
              RSPA  + +   P    H
Sbjct: 275 SPPRSPAEPKGSALGPNPEPH 295


>gi|8924248 SRY-box 18 [Homo sapiens]
          Length = 384

 Score = 30.8 bits (68), Expect = 0.38
 Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 3/58 (5%)

Query: 44  AHPHSHPKPDQIGPDC-EPPRLGISAAGLGSRQEKARKGGQKRSPAATQVAWREPEAR 100
           A P S P P +  P   EP R G+S AG G RQ  A    + R P    + W + E +
Sbjct: 46  AAPASPPSPQRSPPRSPEPGRYGLSPAGRGERQ--AADESRIRRPMNAFMVWAKDERK 101


>gi|21040324 B-cell lymphoma 6 protein isoform 1 [Homo sapiens]
          Length = 706

 Score = 30.4 bits (67), Expect = 0.49
 Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 27  PACPVAETEPQEQTESAAHPHSHPKP-DQIGPDCEPPRLGISAAGLGSRQEKARKGGQKR 85
           PA P A   P    + A+     P   D+I    EPP   ++  GL S Q   +   Q  
Sbjct: 283 PAAPSARNAPYFPCDKASKEEERPSSEDEIALHFEPPNAPLNRKGLVSPQSPQKSDCQPN 342

Query: 86  SP 87
           SP
Sbjct: 343 SP 344


>gi|197927147 B-cell lymphoma 6 protein isoform 2 [Homo sapiens]
          Length = 650

 Score = 30.4 bits (67), Expect = 0.49
 Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 27  PACPVAETEPQEQTESAAHPHSHPKP-DQIGPDCEPPRLGISAAGLGSRQEKARKGGQKR 85
           PA P A   P    + A+     P   D+I    EPP   ++  GL S Q   +   Q  
Sbjct: 283 PAAPSARNAPYFPCDKASKEEERPSSEDEIALHFEPPNAPLNRKGLVSPQSPQKSDCQPN 342

Query: 86  SP 87
           SP
Sbjct: 343 SP 344


>gi|195927002 B-cell lymphoma 6 protein isoform 1 [Homo sapiens]
          Length = 706

 Score = 30.4 bits (67), Expect = 0.49
 Identities = 19/62 (30%), Positives = 25/62 (40%), Gaps = 1/62 (1%)

Query: 27  PACPVAETEPQEQTESAAHPHSHPKP-DQIGPDCEPPRLGISAAGLGSRQEKARKGGQKR 85
           PA P A   P    + A+     P   D+I    EPP   ++  GL S Q   +   Q  
Sbjct: 283 PAAPSARNAPYFPCDKASKEEERPSSEDEIALHFEPPNAPLNRKGLVSPQSPQKSDCQPN 342

Query: 86  SP 87
           SP
Sbjct: 343 SP 344


>gi|7657116 glyceraldehyde-3-phosphate dehydrogenase,
          spermatogenic [Homo sapiens]
          Length = 408

 Score = 30.4 bits (67), Expect = 0.49
 Identities = 12/45 (26%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 18 TLVSIILHPPACPVAETEPQEQTESAAHPHSHPKPDQIGPDCEPP 62
          T+V ++  P  CPV    P  + ++   P   P+P  +  + +PP
Sbjct: 12 TVVQLLRQP--CPVTRAPPPPEPKAEVEPQPQPEPTPVREEIKPP 54


>gi|72256200 B-cell CLL/lymphoma 9 [Homo sapiens]
          Length = 1426

 Score = 30.4 bits (67), Expect = 0.49
 Identities = 25/99 (25%), Positives = 36/99 (36%), Gaps = 16/99 (16%)

Query: 11   QQPRLLGTLVSIILHPPACPVAETEPQEQTESAAHPHSHPKPDQIGPDCEPPRLGISAAG 70
            Q PR+ G         P  P+    P   T+  +H +  P P+ +GP+  PP       G
Sbjct: 1061 QNPRISGP-------NPVVPMPTLSPMGMTQPLSHSNQMPSPNAVGPNI-PPHGVPMGPG 1112

Query: 71   LGSRQEKARKGGQKRSPAATQVAWREPEARMHSSKGVAP 109
            L S       G Q+            P+ RM   +G  P
Sbjct: 1113 LMSHNPIMGHGSQEPPMV--------PQGRMGFPQGFPP 1143


>gi|196115158 CDKN1A interacting zinc finger protein 1 isoform 4
           [Homo sapiens]
          Length = 818

 Score = 30.4 bits (67), Expect = 0.49
 Identities = 22/95 (23%), Positives = 37/95 (38%), Gaps = 6/95 (6%)

Query: 6   SEPRHQQPRLLGTLVSIILHPPACPVAETEPQEQTESAAHPHSHPKPDQIGPDCEPPRLG 65
           +EP+ Q    + T     + P   P A+   Q   ++   PH+ P+   + P+  P  + 
Sbjct: 345 AEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTP--VV 402

Query: 66  ISAAGLGSRQEKARKGGQKR----SPAATQVAWRE 96
           +   GL    +    GG        P  TQV+  E
Sbjct: 403 VHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEE 437


>gi|196115153 CDKN1A interacting zinc finger protein 1 isoform 3
           [Homo sapiens]
          Length = 837

 Score = 30.4 bits (67), Expect = 0.49
 Identities = 22/95 (23%), Positives = 37/95 (38%), Gaps = 6/95 (6%)

Query: 6   SEPRHQQPRLLGTLVSIILHPPACPVAETEPQEQTESAAHPHSHPKPDQIGPDCEPPRLG 65
           +EP+ Q    + T     + P   P A+   Q   ++   PH+ P+   + P+  P  + 
Sbjct: 364 AEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTP--VV 421

Query: 66  ISAAGLGSRQEKARKGGQKR----SPAATQVAWRE 96
           +   GL    +    GG        P  TQV+  E
Sbjct: 422 VHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEE 456


>gi|196115141 CDKN1A interacting zinc finger protein 1 isoform 2
           [Homo sapiens]
          Length = 842

 Score = 30.4 bits (67), Expect = 0.49
 Identities = 22/95 (23%), Positives = 37/95 (38%), Gaps = 6/95 (6%)

Query: 6   SEPRHQQPRLLGTLVSIILHPPACPVAETEPQEQTESAAHPHSHPKPDQIGPDCEPPRLG 65
           +EP+ Q    + T     + P   P A+   Q   ++   PH+ P+   + P+  P  + 
Sbjct: 369 AEPQKQVQPQVHTQAQPSVQPQEHPPAQVSVQPPEQTHEQPHTQPQVSLLAPEQTP--VV 426

Query: 66  ISAAGLGSRQEKARKGGQKR----SPAATQVAWRE 96
           +   GL    +    GG        P  TQV+  E
Sbjct: 427 VHVCGLEMPPDAVEAGGGMEKTLPEPVGTQVSMEE 461


>gi|40255047 pleckstrin homology domain containing, family H (with
           MyTH4 domain) member 3 [Homo sapiens]
          Length = 793

 Score = 30.4 bits (67), Expect = 0.49
 Identities = 30/111 (27%), Positives = 44/111 (39%), Gaps = 18/111 (16%)

Query: 36  PQEQTESAAHPHSHPKPDQIGPDCEPPRLGISAAGL-------GSRQEKARKGGQKRSPA 88
           P  + +    P + P+ D   P   PP      AG          R E+AR+GG  R+  
Sbjct: 555 PLPRLDRLLPPPAPPREDPPRPTPRPPPSAALLAGALWSPGLAKRRAERARRGGAGRTAG 614

Query: 89  ATQVAWREPEARMHSSKGVAPGWLWSDCGGKRRLRSEGGAGKVASVVARAA 139
           +     RE      ++  V  GW        +RLR  G A  +A+ +A AA
Sbjct: 615 SIA---REGGGGAGTAAAVLGGW--------KRLRGMGRAEAMAAYLALAA 654


>gi|229094128 active breakpoint cluster region-related  protein
           isoform c [Homo sapiens]
          Length = 813

 Score = 30.0 bits (66), Expect = 0.65
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 3/52 (5%)

Query: 30  PVAETEPQEQTESAAHPHSHPKPDQIGPDCEPPRLGISAAGLGSRQEKARKG 81
           P+A+       ES A P  HP PD    + E  ++ ISA     ++EKA KG
Sbjct: 305 PLADLVFPSPEESEASPQVHPFPDH---ELEDMKMKISALKSEIQKEKANKG 353


>gi|239756116 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 194

 Score = 30.0 bits (66), Expect = 0.65
 Identities = 43/144 (29%), Positives = 55/144 (38%), Gaps = 24/144 (16%)

Query: 20  VSIILHPPACPVAETEP----QEQTESAAHPHSHPKPDQIG----PDCEPPRLGISAA-G 70
           VS +L P A  +   EP    +E  +    P     P   G    P  +P  L  S + G
Sbjct: 17  VSTLLSPRALSLPAEEPHARLREDKQGEPPPPGEFSPPGDGSSTLPGGDPACLLKSCSPG 76

Query: 71  LGSRQEKARKGGQKRS---------PAA--TQVAWREPEARM---HSSKGVAPGWLWSDC 116
           LG+R   A  GG   S         PAA  TQV+W    AR+    +S   A    W   
Sbjct: 77  LGTRSSPAAAGGGATSGSPRVVTPEPAAPATQVSWPPSSARLLAGPASPSRAEAQAWPSV 136

Query: 117 GGKRRLRSEGGAGKVASVVARAAA 140
              R   S G A   A+  +R AA
Sbjct: 137 -PDRSADSSGAAAATATAGSRRAA 159


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.313    0.129    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,906,552
Number of Sequences: 37866
Number of extensions: 356108
Number of successful extensions: 1612
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 118
Number of HSP's that attempted gapping in prelim test: 1485
Number of HSP's gapped (non-prelim): 243
length of query: 140
length of database: 18,247,518
effective HSP length: 92
effective length of query: 48
effective length of database: 14,763,846
effective search space: 708664608
effective search space used: 708664608
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.