BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239508747 PREDICTED: hypothetical protein [Homo sapiens] (308 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239754508 PREDICTED: hypothetical protein [Homo sapiens] 632 0.0 gi|239508747 PREDICTED: hypothetical protein [Homo sapiens] 632 0.0 gi|239749068 PREDICTED: hypothetical protein [Homo sapiens] 629 e-180 gi|239743094 PREDICTED: hypothetical protein XP_002342753 [Homo ... 629 e-180 gi|110832843 TBP-associated factor 4 [Homo sapiens] 52 7e-07 gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 46 5e-05 gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] 45 8e-05 gi|19924099 synapsin I isoform Ia [Homo sapiens] 43 3e-04 gi|19924097 synapsin I isoform Ib [Homo sapiens] 43 3e-04 gi|4503519 eukaryotic translation initiation factor 3, subunit 5... 42 7e-04 gi|19111150 angiomotin isoform 2 [Homo sapiens] 42 7e-04 gi|166064029 angiomotin isoform 1 [Homo sapiens] 42 7e-04 gi|182507165 thymus expressed gene 3-like [Homo sapiens] 42 7e-04 gi|163965366 nascent polypeptide-associated complex alpha subuni... 42 9e-04 gi|188219577 ring finger protein 19B isoform a [Homo sapiens] 41 0.002 gi|188219579 ring finger protein 19B isoform b [Homo sapiens] 41 0.002 gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002 gi|239746530 PREDICTED: hypothetical protein XP_002343754 [Homo ... 39 0.004 gi|239741731 PREDICTED: hypothetical protein XP_002342307 [Homo ... 39 0.004 gi|154146199 sal-like 3 [Homo sapiens] 39 0.004 gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens] 39 0.004 gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens] 39 0.004 gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 39 0.004 gi|47716512 mex-3 homolog B [Homo sapiens] 39 0.006 gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo... 39 0.006 gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo... 39 0.006 gi|209862765 RUN and SH3 domain containing 2 [Homo sapiens] 39 0.006 gi|55741719 RUN and SH3 domain containing 2 [Homo sapiens] 39 0.006 gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sap... 39 0.008 gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 39 0.008 >gi|239754508 PREDICTED: hypothetical protein [Homo sapiens] Length = 308 Score = 632 bits (1629), Expect = 0.0 Identities = 308/308 (100%), Positives = 308/308 (100%) Query: 1 MRSGDKGVLDSCVSFHKGPKCDRGSYQKAGGDFLPGSKPGQEERRREACVPSRTRLASVA 60 MRSGDKGVLDSCVSFHKGPKCDRGSYQKAGGDFLPGSKPGQEERRREACVPSRTRLASVA Sbjct: 1 MRSGDKGVLDSCVSFHKGPKCDRGSYQKAGGDFLPGSKPGQEERRREACVPSRTRLASVA 60 Query: 61 TRGAQQGPGFGRRVLHSDAALSRWPQAWGAGRSTPAARLQARRERGAGMLASNLTTRAHG 120 TRGAQQGPGFGRRVLHSDAALSRWPQAWGAGRSTPAARLQARRERGAGMLASNLTTRAHG Sbjct: 61 TRGAQQGPGFGRRVLHSDAALSRWPQAWGAGRSTPAARLQARRERGAGMLASNLTTRAHG 120 Query: 121 TEAGGPAFPRGRAVHYVGQGASAPPAAAAPGASACSRRRNGGRRLRQASYLHSPAVIFIC 180 TEAGGPAFPRGRAVHYVGQGASAPPAAAAPGASACSRRRNGGRRLRQASYLHSPAVIFIC Sbjct: 121 TEAGGPAFPRGRAVHYVGQGASAPPAAAAPGASACSRRRNGGRRLRQASYLHSPAVIFIC 180 Query: 181 GGNEVVSGAPSVAEPDIQIALPAPPAPARWSREPQAARARTASPLCPATARASSSSPAPL 240 GGNEVVSGAPSVAEPDIQIALPAPPAPARWSREPQAARARTASPLCPATARASSSSPAPL Sbjct: 181 GGNEVVSGAPSVAEPDIQIALPAPPAPARWSREPQAARARTASPLCPATARASSSSPAPL 240 Query: 241 FPSPSPFPPLLCRARLSPRNQPPCRVRLPGIPHAARVTVNTRQSRKSKKAANQRDFSIWK 300 FPSPSPFPPLLCRARLSPRNQPPCRVRLPGIPHAARVTVNTRQSRKSKKAANQRDFSIWK Sbjct: 241 FPSPSPFPPLLCRARLSPRNQPPCRVRLPGIPHAARVTVNTRQSRKSKKAANQRDFSIWK 300 Query: 301 TGLRRGCT 308 TGLRRGCT Sbjct: 301 TGLRRGCT 308 >gi|239508747 PREDICTED: hypothetical protein [Homo sapiens] Length = 308 Score = 632 bits (1629), Expect = 0.0 Identities = 308/308 (100%), Positives = 308/308 (100%) Query: 1 MRSGDKGVLDSCVSFHKGPKCDRGSYQKAGGDFLPGSKPGQEERRREACVPSRTRLASVA 60 MRSGDKGVLDSCVSFHKGPKCDRGSYQKAGGDFLPGSKPGQEERRREACVPSRTRLASVA Sbjct: 1 MRSGDKGVLDSCVSFHKGPKCDRGSYQKAGGDFLPGSKPGQEERRREACVPSRTRLASVA 60 Query: 61 TRGAQQGPGFGRRVLHSDAALSRWPQAWGAGRSTPAARLQARRERGAGMLASNLTTRAHG 120 TRGAQQGPGFGRRVLHSDAALSRWPQAWGAGRSTPAARLQARRERGAGMLASNLTTRAHG Sbjct: 61 TRGAQQGPGFGRRVLHSDAALSRWPQAWGAGRSTPAARLQARRERGAGMLASNLTTRAHG 120 Query: 121 TEAGGPAFPRGRAVHYVGQGASAPPAAAAPGASACSRRRNGGRRLRQASYLHSPAVIFIC 180 TEAGGPAFPRGRAVHYVGQGASAPPAAAAPGASACSRRRNGGRRLRQASYLHSPAVIFIC Sbjct: 121 TEAGGPAFPRGRAVHYVGQGASAPPAAAAPGASACSRRRNGGRRLRQASYLHSPAVIFIC 180 Query: 181 GGNEVVSGAPSVAEPDIQIALPAPPAPARWSREPQAARARTASPLCPATARASSSSPAPL 240 GGNEVVSGAPSVAEPDIQIALPAPPAPARWSREPQAARARTASPLCPATARASSSSPAPL Sbjct: 181 GGNEVVSGAPSVAEPDIQIALPAPPAPARWSREPQAARARTASPLCPATARASSSSPAPL 240 Query: 241 FPSPSPFPPLLCRARLSPRNQPPCRVRLPGIPHAARVTVNTRQSRKSKKAANQRDFSIWK 300 FPSPSPFPPLLCRARLSPRNQPPCRVRLPGIPHAARVTVNTRQSRKSKKAANQRDFSIWK Sbjct: 241 FPSPSPFPPLLCRARLSPRNQPPCRVRLPGIPHAARVTVNTRQSRKSKKAANQRDFSIWK 300 Query: 301 TGLRRGCT 308 TGLRRGCT Sbjct: 301 TGLRRGCT 308 >gi|239749068 PREDICTED: hypothetical protein [Homo sapiens] Length = 308 Score = 629 bits (1621), Expect = e-180 Identities = 307/308 (99%), Positives = 307/308 (99%) Query: 1 MRSGDKGVLDSCVSFHKGPKCDRGSYQKAGGDFLPGSKPGQEERRREACVPSRTRLASVA 60 MRSGDKGVLDSCVSFHKGPKCDRGSYQKAGGDFLPGSKPGQEERRREACVPSRTRLASVA Sbjct: 1 MRSGDKGVLDSCVSFHKGPKCDRGSYQKAGGDFLPGSKPGQEERRREACVPSRTRLASVA 60 Query: 61 TRGAQQGPGFGRRVLHSDAALSRWPQAWGAGRSTPAARLQARRERGAGMLASNLTTRAHG 120 TRGAQQGPGFGRRVLHSDAALSRWPQAWGAGRSTPAARLQARRERGAGMLASNLTTRAHG Sbjct: 61 TRGAQQGPGFGRRVLHSDAALSRWPQAWGAGRSTPAARLQARRERGAGMLASNLTTRAHG 120 Query: 121 TEAGGPAFPRGRAVHYVGQGASAPPAAAAPGASACSRRRNGGRRLRQASYLHSPAVIFIC 180 TEAGGPAFPRGRAVHYVGQGASAPPAAAAPGASACSRRRN GRRLRQASYLHSPAVIFIC Sbjct: 121 TEAGGPAFPRGRAVHYVGQGASAPPAAAAPGASACSRRRNEGRRLRQASYLHSPAVIFIC 180 Query: 181 GGNEVVSGAPSVAEPDIQIALPAPPAPARWSREPQAARARTASPLCPATARASSSSPAPL 240 GGNEVVSGAPSVAEPDIQIALPAPPAPARWSREPQAARARTASPLCPATARASSSSPAPL Sbjct: 181 GGNEVVSGAPSVAEPDIQIALPAPPAPARWSREPQAARARTASPLCPATARASSSSPAPL 240 Query: 241 FPSPSPFPPLLCRARLSPRNQPPCRVRLPGIPHAARVTVNTRQSRKSKKAANQRDFSIWK 300 FPSPSPFPPLLCRARLSPRNQPPCRVRLPGIPHAARVTVNTRQSRKSKKAANQRDFSIWK Sbjct: 241 FPSPSPFPPLLCRARLSPRNQPPCRVRLPGIPHAARVTVNTRQSRKSKKAANQRDFSIWK 300 Query: 301 TGLRRGCT 308 TGLRRGCT Sbjct: 301 TGLRRGCT 308 >gi|239743094 PREDICTED: hypothetical protein XP_002342753 [Homo sapiens] Length = 308 Score = 629 bits (1621), Expect = e-180 Identities = 307/308 (99%), Positives = 307/308 (99%) Query: 1 MRSGDKGVLDSCVSFHKGPKCDRGSYQKAGGDFLPGSKPGQEERRREACVPSRTRLASVA 60 MRSGDKGVLDSCVSFHKGPKCDRGSYQKAGGDFLPGSKPGQEERRREACVPSRTRLASVA Sbjct: 1 MRSGDKGVLDSCVSFHKGPKCDRGSYQKAGGDFLPGSKPGQEERRREACVPSRTRLASVA 60 Query: 61 TRGAQQGPGFGRRVLHSDAALSRWPQAWGAGRSTPAARLQARRERGAGMLASNLTTRAHG 120 TRGAQQGPGFGRRVLHSDAALSRWPQAWGAGRSTPAARLQARRERGAGMLASNLTTRAHG Sbjct: 61 TRGAQQGPGFGRRVLHSDAALSRWPQAWGAGRSTPAARLQARRERGAGMLASNLTTRAHG 120 Query: 121 TEAGGPAFPRGRAVHYVGQGASAPPAAAAPGASACSRRRNGGRRLRQASYLHSPAVIFIC 180 TEAGGPAFPRGRAVHYVGQGASAPPAAAAPGASACSRRRN GRRLRQASYLHSPAVIFIC Sbjct: 121 TEAGGPAFPRGRAVHYVGQGASAPPAAAAPGASACSRRRNEGRRLRQASYLHSPAVIFIC 180 Query: 181 GGNEVVSGAPSVAEPDIQIALPAPPAPARWSREPQAARARTASPLCPATARASSSSPAPL 240 GGNEVVSGAPSVAEPDIQIALPAPPAPARWSREPQAARARTASPLCPATARASSSSPAPL Sbjct: 181 GGNEVVSGAPSVAEPDIQIALPAPPAPARWSREPQAARARTASPLCPATARASSSSPAPL 240 Query: 241 FPSPSPFPPLLCRARLSPRNQPPCRVRLPGIPHAARVTVNTRQSRKSKKAANQRDFSIWK 300 FPSPSPFPPLLCRARLSPRNQPPCRVRLPGIPHAARVTVNTRQSRKSKKAANQRDFSIWK Sbjct: 241 FPSPSPFPPLLCRARLSPRNQPPCRVRLPGIPHAARVTVNTRQSRKSKKAANQRDFSIWK 300 Query: 301 TGLRRGCT 308 TGLRRGCT Sbjct: 301 TGLRRGCT 308 >gi|110832843 TBP-associated factor 4 [Homo sapiens] Length = 1085 Score = 52.0 bits (123), Expect = 7e-07 Identities = 56/200 (28%), Positives = 69/200 (34%), Gaps = 38/200 (19%) Query: 90 AGRSTPAARLQARRERGAGMLASNLTTRAHGTEAG------GPAFPRGRAVHYV------ 137 AG + PAA+L+ E AG A A AG GPA P G A Sbjct: 117 AGPAPPAAKLRPPPEGSAGSCAP--VPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGP 174 Query: 138 --GQGASAPPAAAAPGASACSRRRNGGRRLRQASYLHSPAVIFICGGNEVVSGAPSVAEP 195 G G P P ++ NG L + + +PAV + G + P A P Sbjct: 175 GPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAP 234 Query: 196 DIQIALP------APPAPARWSREPQAARARTASPLCPATARASSSSPAPLFPSPSPFPP 249 I P APPAP A + P PA A +PA P P P P Sbjct: 235 GTVIQTPPFVGAAAPPAP-----------AAPSPPAAPAPA-----APAAAPPPPPPAPA 278 Query: 250 LLCRARLSPRNQPPCRVRLP 269 L R P P +P Sbjct: 279 TLARPPGHPAGPPTAAPAVP 298 Score = 38.9 bits (89), Expect = 0.006 Identities = 50/166 (30%), Positives = 59/166 (35%), Gaps = 27/166 (16%) Query: 108 GMLASNLTTRAHGTEAGGPAFPRGRAV------HYVGQG-----ASAPPAAAAPGASACS 156 G L S L A P P RA ++V G A A PAA A GA + Sbjct: 27 GSLESQLAASAAHHHHLAPRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAA 86 Query: 157 RRRNGGRRLRQASYLHSPAVIFICGGNEVVSGAPSVAEPDIQIALPAPPAPARWSREPQA 216 R R GG G PS P + A PAPPA R P Sbjct: 87 PEPPPAGRARPG------------GGGPQRPGPPSPRRPLVP-AGPAPPAAKL--RPPPE 131 Query: 217 ARARTASPLCPATARASSSSPAPLFPSPSPFPPLLCRARLSPRNQP 262 A + +P+ A A A+ PAP P+ P P AR P P Sbjct: 132 GSAGSCAPVPAAAAVAAGPEPAPAGPA-KPAGPAALAARAGPGPGP 176 Score = 34.3 bits (77), Expect = 0.14 Identities = 41/162 (25%), Positives = 59/162 (36%), Gaps = 26/162 (16%) Query: 120 GTEAGGPAFPRGRAVHYVGQGASAPPAAAA------------PGASACSR----RRNGGR 163 G PA P A G +AP A A PGA+A + + + Sbjct: 289 GPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESPK 348 Query: 164 RLRQASYLHSPAVIFICGGNEVVSGAPSVAEPDIQIALPA-----PPAPARWSREPQAAR 218 R+ QA+ PA + + A V P +Q ALP+ PPAP + P+ A Sbjct: 349 RVVQAA---PPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGTPTGLPKGAA 405 Query: 219 ARTASPLCPATARASSSSPAPLFPSPSPFPPLLCRARLSPRN 260 L +S A L +P+ P L + +P N Sbjct: 406 GAVTQSLSRTPTATTSGIRATL--TPTVLAPRLPQPPQNPTN 445 >gi|158854042 hypothetical protein LOC222183 [Homo sapiens] Length = 653 Score = 45.8 bits (107), Expect = 5e-05 Identities = 70/263 (26%), Positives = 90/263 (34%), Gaps = 48/263 (18%) Query: 3 SGDKGVLDSCVSFHKGPKCDRGSYQKAGGDFLPGSKPGQEERRREACVPSRTRLASVATR 62 SG + S S P+ + GS Q++G G +PG + R+ A Sbjct: 295 SGSRSPSPSGGSGWGSPQRNGGSGQRSGAH---GGRPGSAHSPPDKPSSPSPRVRDKAAA 351 Query: 63 GAQQGPGFGRRVLHSDAALSRWPQAWGAGRSTPAARLQARRERGAGMLASNLTTRAHGTE 122 A P G+ +A S Q G + A R + RR R +S R G Sbjct: 352 AAPTPPARGKESPSPRSAPSS--QGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRR 409 Query: 123 AGGPAFPRG--------RAVHYVGQGASAPPAAAAPGASACSRRRNGGR---------RL 165 PA PRG R+ G G AP PG S R +GG R Sbjct: 410 RPRPAPPRGSSRSLSRARSSSDSGSGRGAPGPGPEPG----SERGHGGHGKRAKERPPRA 465 Query: 166 RQASYLHSPAVIFICGGNEVVSGAPSVAEPDIQIALPAPPAPARWSREPQAARARTASPL 225 R AS SP GG E S + S P P WS S Sbjct: 466 RPASTSPSPGAHGRRGGPEGKSSSRSPG-----------PHPRSWS-----------SSR 503 Query: 226 CPATARASSSSPAPLFPSPSPFP 248 P+ +R+ S+ P PS SP P Sbjct: 504 SPSKSRSRSAEKRPHSPSRSPSP 526 >gi|115298682 HBxAg transactivated protein 2 [Homo sapiens] Length = 2817 Score = 45.1 bits (105), Expect = 8e-05 Identities = 46/191 (24%), Positives = 71/191 (37%), Gaps = 16/191 (8%) Query: 95 PAARLQARRERGAGMLASNLTTRAHGTEAGGPAFPRGRAVHYVGQGASAPPAAAAPGASA 154 PA A + AS L T A PA P AS P + +A ++ Sbjct: 1771 PATLTPVPASTSAPVPASTLAPVLASTSAPVPASPLAPVSASASVSASVPASTSAAAITS 1830 Query: 155 CSRRRNGGRRLRQASYLHSPAVIFICGGNEV---VSGAPSVAEPDIQIALPAPPAPARWS 211 S + + + +PA + I + S S + P A +P AP + Sbjct: 1831 SSAPASAPAPTPILASVSTPASVTILASASIPILASALASTSAPTPAPAASSPAAPVITA 1890 Query: 212 REPQAARARTASPLCPATARASSSSPAPL-FPSPSPFPPLLCRARL------------SP 258 A+ + PL PA+A A + +P P+ P+P+P P +A+ Sbjct: 1891 PTIPASAPTASVPLAPASASAPAPAPTPVSAPNPAPPAPAQTQAQTHKPVQNPLQTTSQS 1950 Query: 259 RNQPPCRVRLP 269 QPP +RLP Sbjct: 1951 SKQPPPSIRLP 1961 >gi|19924099 synapsin I isoform Ia [Homo sapiens] Length = 705 Score = 43.1 bits (100), Expect = 3e-04 Identities = 44/153 (28%), Positives = 60/153 (39%), Gaps = 15/153 (9%) Query: 121 TEAGGPAFPRGRAVHYVGQGASAPPAAAAPGASACSRRRNGGRRLRQASYLHSPAVIFIC 180 ++A P +GR V G APPAA P + + R+ + RQ S + PA Sbjct: 520 SQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTS-VSGPA----- 573 Query: 181 GGNEVVSGAPSVAEPDIQIALPAPPAPARWSREPQAARARTASPLCPATARASSSSPAPL 240 SGAP + Q PP PA +R+ A A P+ P T ++ P P Sbjct: 574 --PPKASGAPPGGQ-QRQGPPQKPPGPAGPTRQ-----ASQAGPV-PRTGPPTTQQPRPS 624 Query: 241 FPSPSPFPPLLCRARLSPRNQPPCRVRLPGIPH 273 P P+ P + S PP G PH Sbjct: 625 GPGPAGRPKPQLAQKPSQDVPPPATAAAGGPPH 657 >gi|19924097 synapsin I isoform Ib [Homo sapiens] Length = 669 Score = 43.1 bits (100), Expect = 3e-04 Identities = 44/153 (28%), Positives = 60/153 (39%), Gaps = 15/153 (9%) Query: 121 TEAGGPAFPRGRAVHYVGQGASAPPAAAAPGASACSRRRNGGRRLRQASYLHSPAVIFIC 180 ++A P +GR V G APPAA P + + R+ + RQ S + PA Sbjct: 520 SQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTS-VSGPA----- 573 Query: 181 GGNEVVSGAPSVAEPDIQIALPAPPAPARWSREPQAARARTASPLCPATARASSSSPAPL 240 SGAP + Q PP PA +R+ A A P+ P T ++ P P Sbjct: 574 --PPKASGAPPGGQ-QRQGPPQKPPGPAGPTRQ-----ASQAGPV-PRTGPPTTQQPRPS 624 Query: 241 FPSPSPFPPLLCRARLSPRNQPPCRVRLPGIPH 273 P P+ P + S PP G PH Sbjct: 625 GPGPAGRPKPQLAQKPSQDVPPPATAAAGGPPH 657 >gi|4503519 eukaryotic translation initiation factor 3, subunit 5 epsilon, 47kDa [Homo sapiens] Length = 357 Score = 42.0 bits (97), Expect = 7e-04 Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 4/53 (7%) Query: 200 ALPAPPAPARWSREPQAARARTASP-LCPATARASSSSPAPLFPSPS---PFP 248 A P P A S +P AA A TA+P PA+A+A + +PAP P P+ PFP Sbjct: 35 AAPVPAAAPASSSDPAAAAAATAAPGQTPASAQAPAQTPAPALPGPALPGPFP 87 >gi|19111150 angiomotin isoform 2 [Homo sapiens] Length = 675 Score = 42.0 bits (97), Expect = 7e-04 Identities = 53/171 (30%), Positives = 72/171 (42%), Gaps = 21/171 (12%) Query: 107 AGMLASNLTTRAHGTEAGGPAFPRGRAVHYVGQGASAP-PAAAAPGASACSRRRNGGRRL 165 A A+ T A T A P A A+AP PA AA A+A S G Sbjct: 481 AATAAAITATAATITTTMVAAAPVAVAAAAAPAAAAAPSPATAAATAAAVSPAAAG---- 536 Query: 166 RQASYLHSPAVIFICGGNEVVSGAPSVAEPDIQIALPAP-PAPARWSREPQAARARTASP 224 PA + V A + A + A PAP PAPA AA +A Sbjct: 537 ------QIPAAASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPALVPVPAPAAAQASA-- 588 Query: 225 LCPATARASSSSPAPLFPSPSPFP-PLLCRARL--SPRNQP-PCRVRLPGI 271 PA +A +S+PA + P+P+P P P + +A + SP P P R+ +P + Sbjct: 589 --PAQTQAPTSAPA-VAPTPAPTPTPAVAQAEVPASPATGPGPHRLSIPSL 636 Score = 37.4 bits (85), Expect = 0.017 Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 2/111 (1%) Query: 141 ASAPPAAAAPGASACSRRRNGGRRLRQASYLHSPAVIFICGGNEVVSGAPSVAEPDIQIA 200 A AP + AP A+A + + + + A + + A + P A Sbjct: 468 AVAPISVPAPVAAAATAAAITATAATITTTMVAAAPVAVAAA--AAPAAAAAPSPATAAA 525 Query: 201 LPAPPAPARWSREPQAARARTASPLCPATARASSSSPAPLFPSPSPFPPLL 251 A +PA + P AA +A+ + P+ A A++ AP P+P P P L+ Sbjct: 526 TAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPALV 576 >gi|166064029 angiomotin isoform 1 [Homo sapiens] Length = 1084 Score = 42.0 bits (97), Expect = 7e-04 Identities = 53/171 (30%), Positives = 72/171 (42%), Gaps = 21/171 (12%) Query: 107 AGMLASNLTTRAHGTEAGGPAFPRGRAVHYVGQGASAP-PAAAAPGASACSRRRNGGRRL 165 A A+ T A T A P A A+AP PA AA A+A S G Sbjct: 890 AATAAAITATAATITTTMVAAAPVAVAAAAAPAAAAAPSPATAAATAAAVSPAAAG---- 945 Query: 166 RQASYLHSPAVIFICGGNEVVSGAPSVAEPDIQIALPAP-PAPARWSREPQAARARTASP 224 PA + V A + A + A PAP PAPA AA +A Sbjct: 946 ------QIPAAASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPALVPVPAPAAAQASA-- 997 Query: 225 LCPATARASSSSPAPLFPSPSPFP-PLLCRARL--SPRNQP-PCRVRLPGI 271 PA +A +S+PA + P+P+P P P + +A + SP P P R+ +P + Sbjct: 998 --PAQTQAPTSAPA-VAPTPAPTPTPAVAQAEVPASPATGPGPHRLSIPSL 1045 Score = 37.4 bits (85), Expect = 0.017 Identities = 28/111 (25%), Positives = 47/111 (42%), Gaps = 2/111 (1%) Query: 141 ASAPPAAAAPGASACSRRRNGGRRLRQASYLHSPAVIFICGGNEVVSGAPSVAEPDIQIA 200 A AP + AP A+A + + + + A + + A + P A Sbjct: 877 AVAPISVPAPVAAAATAAAITATAATITTTMVAAAPVAVAAA--AAPAAAAAPSPATAAA 934 Query: 201 LPAPPAPARWSREPQAARARTASPLCPATARASSSSPAPLFPSPSPFPPLL 251 A +PA + P AA +A+ + P+ A A++ AP P+P P P L+ Sbjct: 935 TAAAVSPAAAGQIPAAASVASAAAVAPSAAAAAAVQVAPAAPAPVPAPALV 985 >gi|182507165 thymus expressed gene 3-like [Homo sapiens] Length = 629 Score = 42.0 bits (97), Expect = 7e-04 Identities = 84/318 (26%), Positives = 107/318 (33%), Gaps = 55/318 (17%) Query: 4 GDKGVLDSCVSFHKGPKCDRGSYQKAGGDFLPGSKPGQEE-RRREACVP----------- 51 GD G S GP RG Y L + P E A VP Sbjct: 136 GDSGFSGSSSYGRLGPSEPRGIYASERPKSLGDASPSAPEVVGARAAVPRSFSAPYPTAG 195 Query: 52 --SRTRLASVATRGAQQGPGFGRRVLHSDAALS---------RWPQAWGAGRSTP---AA 97 + S A R A+ GP LH+ A S P A GAGR +A Sbjct: 196 GSAGPEACSSAERRARAGPFLTPSPLHAVAMRSPRPCGRPPTDSPDAGGAGRPLDGYISA 255 Query: 98 RLQARRERGAGMLASNLTTRAHGTEAGGPAFPRGRAVHYVGQGASAPPAAAAPGASACSR 157 L+ RR RGAG + G GGP R +V AS P +A P A S Sbjct: 256 LLRRRRRRGAGQ-----PRTSPGGADGGPR--RQNSVRQRPPDASPSPGSARP-AREPSL 307 Query: 158 RRNGGRRLRQASYLHSPAVIFICGGNEVVS-GAPSVAEPDIQIALPAPPAPARWSREPQA 216 R GG + SPA + + S AP A P + P PA R + Sbjct: 308 ERVGG-------HPTSPAALSRAWASSWESEAAPEPAAPPAAPSPPDSPAEGRLVKAQYI 360 Query: 217 ARARTASPLCPATARASSSSPAPLFPSPSPFPPLLCRARLSPRNQPPCRVRLPGIPHAAR 276 A+ A+ P A PP L R R ++ P R R G Sbjct: 361 PGAQAATRGLPGRAARRK-------------PPPLTRGRSVEQSPPRERPRAAGRRGRMA 407 Query: 277 VTVNTRQSRKSKKAANQR 294 R S +++KA+ + Sbjct: 408 EASGRRGSPRARKASRSQ 425 >gi|163965366 nascent polypeptide-associated complex alpha subunit isoform a [Homo sapiens] Length = 2078 Score = 41.6 bits (96), Expect = 9e-04 Identities = 49/189 (25%), Positives = 66/189 (34%), Gaps = 20/189 (10%) Query: 93 STPAARLQARRERGAGMLASNLTTRAHGTEAGGPAFPRGRAVHYVGQGASAPPAAAAPGA 152 +TPAA + + G LA+ A T A P P+G +GA PPAA P Sbjct: 1219 TTPAATPPSPK----GGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPPAATPPSL 1274 Query: 153 SACSRRRNGGRRLRQASYLHSPAVIFICGGNEVVSGAPSVAEPDIQIALPAPPAPARWSR 212 GG +PAV+ + +P P A P P + + Sbjct: 1275 -------KGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTP 1327 Query: 213 EPQAARARTA--------SPLCPATARASSSSPAPLFPSPSPFPPLLCRA-RLSPRNQPP 263 P+ A A +P PAT +S P P PP + + P PP Sbjct: 1328 PPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPP 1387 Query: 264 CRVRLPGIP 272 R P IP Sbjct: 1388 SPKRGPAIP 1396 Score = 34.3 bits (77), Expect = 0.14 Identities = 50/204 (24%), Positives = 70/204 (34%), Gaps = 22/204 (10%) Query: 93 STPAARLQARRERGAGMLASNLTTRAHGTEAGGPAFPRGRAVHYVGQGASAPPAAAAPGA 152 +TPAA L + + G A+ A A P P+G +GA PPAA P Sbjct: 1058 TTPAATLPSPK----GGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSP 1113 Query: 153 SA-CSRRRNGGRRLRQASYLHSPAVIFICGGNEVVSGAPSVAEPDIQIALPAPP---APA 208 + + G A+ SP + P+ P + L PP AP Sbjct: 1114 KGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPT 1173 Query: 209 RWSREPQAARARTASPL---CPATARASSSSP-----------APLFPSPSPFPPLLCRA 254 + P + + A+P P T A+ SP AP P+ +P P A Sbjct: 1174 TPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLA 1233 Query: 255 RLSPRNQPPCRVRLPGIPHAARVT 278 SP+ P P P T Sbjct: 1234 TPSPKGAPTTPAATPPSPKGGPAT 1257 Score = 33.1 bits (74), Expect = 0.32 Identities = 39/153 (25%), Positives = 50/153 (32%), Gaps = 25/153 (16%) Query: 123 AGGPAFPRGRAVHYVGQGASAPPAAAAPGASACSRRRNGGRRLRQASYLHSPAVIFICGG 182 A P P+G +GA PPAA P GG +P Sbjct: 967 AATPPSPKGGPATPSPKGAPTPPAATPPSP-------KGGPATPSPKGAPTP-------- 1011 Query: 183 NEVVSGAPSVAEPDIQIALPAPPAPARWSREPQAA-RARTASPLCPATARASSSSPAPLF 241 P+V P + + A P P S P A + SP + + ++PA Sbjct: 1012 -------PAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATL 1064 Query: 242 PSP--SPFPPLLCRARLSPRNQPPCRVRLPGIP 272 PSP P P L A P PP P P Sbjct: 1065 PSPKGGPATPSLKGAPTPPAATPPSPKGGPATP 1097 Score = 30.8 bits (68), Expect = 1.6 Identities = 45/191 (23%), Positives = 64/191 (33%), Gaps = 27/191 (14%) Query: 91 GRSTPAARLQARRERGAGMLASNLTTRAHGTEAGGPAFPRGRAVHYVGQGASAPPAAAAP 150 G +TPA + + A + S+ +A T A P+G +GA PPAA P Sbjct: 899 GPATPAPK-----QAPALSMTSSSPKKARATPA-----PKGIPASPSPKGAPTPPAATPP 948 Query: 151 GASACSRRRNGGRRLRQASYLHSPAVIFICGGNEVVSGAPSVAEPDIQIALPA--PPAPA 208 GG + +P G P+ P PA PP+P Sbjct: 949 SP-------KGGPATPSPKWAPTPP----AATPPSPKGGPATPSPKGAPTPPAATPPSPK 997 Query: 209 RWSREPQAARARTASPLCPATARASSSSPAPLFPSPSPFPPLLCRARLSPRNQPPCRVRL 268 P A T + P + + S + A FP + PP SP+ P Sbjct: 998 GGPATPSPKGAPTPPAVTPPSPKGSPA--ATPFPKGASTPP--AATPPSPKGSPAATPLP 1053 Query: 269 PGIPHAARVTV 279 G P T+ Sbjct: 1054 KGAPTTPAATL 1064 Score = 29.3 bits (64), Expect = 4.6 Identities = 26/91 (28%), Positives = 35/91 (38%), Gaps = 8/91 (8%) Query: 187 SGAPSVAEPDIQIALPAPPAPARWSREPQAARARTAS---PLCPATARASSSSPAPLFPS 243 S +P A P + AP PA P+ A +S P+ P S +PA L P Sbjct: 1487 SSSPKKA-PATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPK 1545 Query: 244 PSPFPPLLCRARLSPRNQP--PCRVRLPGIP 272 + PP + SP+ P P P P Sbjct: 1546 EALIPPAMTVP--SPKKTPAIPTPKEAPATP 1574 Score = 28.9 bits (63), Expect = 6.0 Identities = 45/158 (28%), Positives = 56/158 (35%), Gaps = 21/158 (13%) Query: 108 GMLASNLTTRAHGTEAGGPAFPRGRAVHYVGQGASAPPAAAAPGASA-CSRRRNGGRRLR 166 G LA+ A T A P P+G +GA PAA P + G Sbjct: 1115 GGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPPPKGAPTT 1174 Query: 167 QASYLHSPAVIFICGGNEVVS--GAPSVA-----EPDIQIALP----APPAPARWSREPQ 215 A+ SP GG S GAP+ P +A P AP PA P+ Sbjct: 1175 PAATPPSPK-----GGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPK 1229 Query: 216 AARARTASPLCPATARASSSSP--APLFPSP--SPFPP 249 A + P T A+ SP P P P +P PP Sbjct: 1230 GGLATPSPKGAPTTPAATPPSPKGGPATPPPKGAPTPP 1267 Score = 28.9 bits (63), Expect = 6.0 Identities = 31/107 (28%), Positives = 42/107 (39%), Gaps = 17/107 (15%) Query: 188 GAPSVAEPDIQIALPA--PPAPARWSREPQAARARTASPLCPATARASSSSPAPLFPSPS 245 G P+ LPA PP+P +EP A + A +SS AP P+P Sbjct: 1454 GGPATPSSKGDPTLPAVTPPSP----KEPPAPKQ---------VATSSSPKKAPATPAPM 1500 Query: 246 PFPPLLCRARLSPRNQP--PCRVRLPGIPHAARVTVNTRQSRKSKKA 290 P L SP+ P P R P P A ++ T + K+A Sbjct: 1501 GAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPATLAPKEA 1547 >gi|188219577 ring finger protein 19B isoform a [Homo sapiens] Length = 732 Score = 40.8 bits (94), Expect = 0.002 Identities = 42/143 (29%), Positives = 57/143 (39%), Gaps = 20/143 (13%) Query: 141 ASAPPAAAAPGASACSRRRNGGRRLRQASYLHSPAVIFICGGNEVVSGAPSVAEPDIQIA 200 + +P + + A+ + R+GGRR R LHS +F + A AEP A Sbjct: 7 SESPRSTSLHAAAPDPKCRSGGRRRRLT--LHS---VFSASARGRRARAKPQAEPPPPAA 61 Query: 201 LPAPPAPARWSREPQAARARTASPLCPATARASSSSPAPLF----------PSPSPFPPL 250 P PPAPA + + A A P A A A++++ P F P Sbjct: 62 QP-PPAPAPAAAQGPPPEALPAEPAAEAEAEAAAAAAEPGFDDEEAAEGGGPGAEEVECP 120 Query: 251 LCRARLSPRNQPPCRVRLPGIPH 273 LC RL P P RL PH Sbjct: 121 LCLVRLPPERAP----RLLSCPH 139 >gi|188219579 ring finger protein 19B isoform b [Homo sapiens] Length = 587 Score = 40.8 bits (94), Expect = 0.002 Identities = 42/143 (29%), Positives = 57/143 (39%), Gaps = 20/143 (13%) Query: 141 ASAPPAAAAPGASACSRRRNGGRRLRQASYLHSPAVIFICGGNEVVSGAPSVAEPDIQIA 200 + +P + + A+ + R+GGRR R LHS +F + A AEP A Sbjct: 7 SESPRSTSLHAAAPDPKCRSGGRRRRLT--LHS---VFSASARGRRARAKPQAEPPPPAA 61 Query: 201 LPAPPAPARWSREPQAARARTASPLCPATARASSSSPAPLF----------PSPSPFPPL 250 P PPAPA + + A A P A A A++++ P F P Sbjct: 62 QP-PPAPAPAAAQGPPPEALPAEPAAEAEAEAAAAAAEPGFDDEEAAEGGGPGAEEVECP 120 Query: 251 LCRARLSPRNQPPCRVRLPGIPH 273 LC RL P P RL PH Sbjct: 121 LCLVRLPPERAP----RLLSCPH 139 >gi|239753839 PREDICTED: hypothetical protein [Homo sapiens] Length = 257 Score = 40.4 bits (93), Expect = 0.002 Identities = 50/202 (24%), Positives = 73/202 (36%), Gaps = 30/202 (14%) Query: 56 LASVATRGAQQGPGFGRRVLHSDAALSRWPQAWG---AGRSTPAARLQARRERGAGMLAS 112 +A A+ G+Q+ PG G + + + P A AGR A R G G A+ Sbjct: 57 VAPAASAGSQEHPGAGGPLCFPARSAAWGPPARASRAAGRRAGPAGPPCRAP-GRGRAAA 115 Query: 113 NLTTRAHGTEAGGPAFPRGRAVHYVGQGASAPPAAAAPGASACSRRRNGGRRLRQASYLH 172 + A GT G PA A A AS+ R RRL Sbjct: 116 TRRSPAPGTARGSPA--------------GVERAGGATAASSAGTRSVPARRLPPP---- 157 Query: 173 SPAVIFICGGNEVVSGAPSVAEPDIQIALPAPPAPARWSREPQAARARTASPLCPATARA 232 CGG + +G+ ++ P +P + RW+ P R +P A Sbjct: 158 -------CGGTSLGAGSRALRRPGSAALPRSPSSSRRWAAMPGPGAPRPGAPGTWPVGFA 210 Query: 233 SSSSPAPLFPSPSPFPPLLCRA 254 ++ PA S +P PP + A Sbjct: 211 VAAPPAAA-ASVAPPPPAVAGA 231 >gi|239746530 PREDICTED: hypothetical protein XP_002343754 [Homo sapiens] Length = 536 Score = 39.3 bits (90), Expect = 0.004 Identities = 80/308 (25%), Positives = 108/308 (35%), Gaps = 65/308 (21%) Query: 35 PGSKPGQEERRR-EACVPSRTRLASVATRGAQQGPGFGRRVLHSDAAL--------SRWP 85 P +P + RRR C P R R A R + G GRR L L R+P Sbjct: 103 PLRRPSRRARRRAPRCAPDR-RCGDSAPRHRPRALGRGRRPLRGRVLLRQLDPFTRPRFP 161 Query: 86 QAWGAGRSTPA---ARLQARRERGAGMLASNLTTRAHGTEAGGPAFPRGRAVHYVGQGAS 142 + G P+ RL+ RR RG HG + GG P G Sbjct: 162 LQFFQGCPQPSRCLGRLEPRRWRG------------HGLQPGGARAP--------GLQVP 201 Query: 143 APPAAAAPGASACSRRRNGGRRL-----RQASYLHSPAVIFI--CGGNEVVSGAPSVAEP 195 APP A+P + G R L +A P + + G + V +VA+ Sbjct: 202 APPGPASPAPLPARQPHKGVRPLGCCRGGRAQAAGQPRGLCLPGRGRDRAVEAGDAVAQV 261 Query: 196 DIQ--IALPAPPAP-----------------ARWSREPQAARART-ASPLCPATARASSS 235 +Q P P AP R RE QA R + L + Sbjct: 262 RVQSHSFAPRPRAPLAVAPAALQRRESEFTLMRMCREEQALRGLSFGLSLVQVACTPPAC 321 Query: 236 SPAPLFPSPSPFPPLLCRARLSPRNQPPCRVRLPGIPHAARVTVNTRQSRKSKKAANQRD 295 SPAPL P +C+ + R R+ L A +V+ R + + K AAN R Sbjct: 322 SPAPLNPWEPQVAIFICQVQSIVRCP---RIFLMKREVALLYSVD-RLAGEGKPAANPRA 377 Query: 296 FS-IWKTG 302 S W+ G Sbjct: 378 VSCTWRWG 385 >gi|239741731 PREDICTED: hypothetical protein XP_002342307 [Homo sapiens] Length = 316 Score = 39.3 bits (90), Expect = 0.004 Identities = 64/271 (23%), Positives = 92/271 (33%), Gaps = 68/271 (25%) Query: 22 DRGSYQKAGGDFLPGSKPGQEERRREACVPSRT---RLASVATRGAQQGPGFGRRVLHSD 78 +R +++ G + PG++ G RE P+R R S R A+ P GR Sbjct: 45 ERRGWKQRGRNGAPGTQRGV----REVGSPTRDQEIRAGSSCGRAARGFPEPGR------ 94 Query: 79 AALSRWPQAWGAGRSTPAARLQARRERGAGMLASNLTTRAHGTEAGGPAFPRGRAVHYVG 138 Q WG G TP ++ GP P+ A +G Sbjct: 95 ---GGKTQEWGGGTGTP--------------------------QSPGPCAPQALA-SLLG 124 Query: 139 QGASAPPAAAAPGASACSRRRNGGRRLRQASYLHSPAV--------IFICGGNEVVSGAP 190 G + A G+S S RR G R A++ P + + V G P Sbjct: 125 PGKAGCRARLQGGSSGASPRRLPGGRGPAAAFAVEPGTGQRPRNTSLAQASRSGTVPGLP 184 Query: 191 SVAEPDIQIALPAPPAP---------ARWSREPQAARARTASPLCPATARASSSSPAPLF 241 + +++ APP P +REP + + PLC S L Sbjct: 185 PASLQPLRVPYFAPPGPHDPTSRGPGRLLTREPPSRKLPPPLPLC--------RSRWVLA 236 Query: 242 PSPSPFPPLLCRARLSPRNQPPCRVRLPGIP 272 P P P PP A P P R++ P P Sbjct: 237 PPPPPAPPGPNAAAHPPLRPPRARLQDPVDP 267 >gi|154146199 sal-like 3 [Homo sapiens] Length = 1300 Score = 39.3 bits (90), Expect = 0.004 Identities = 25/92 (27%), Positives = 40/92 (43%), Gaps = 6/92 (6%) Query: 187 SGAPSVAEPDIQIALPAPPAPARWSREPQAARARTASPLCPATARASSSSPAPLFPSPSP 246 +GAP+ A A PA A+ P++ + P P+ A S++PAP P+P+P Sbjct: 268 AGAPAAAIAGSGPAAPAAFEGAQPLSRPESGASTPGGPAEPSAPAAPSAAPAPAAPAPAP 327 Query: 247 FPPLLCRARLSPRNQPPCRV------RLPGIP 272 P ++ + PP PG+P Sbjct: 328 APQSAASSQPQSASTPPALAPGSLLGAAPGLP 359 Score = 30.0 bits (66), Expect = 2.7 Identities = 42/165 (25%), Positives = 61/165 (36%), Gaps = 36/165 (21%) Query: 89 GAGRSTPAA----RLQARRERGAGMLASNLTTRAHGTEAGGPAFPRGRAVHYVGQGASAP 144 G+G + PAA + +R E GA + GGPA P A +AP Sbjct: 277 GSGPAAPAAFEGAQPLSRPESGA-------------STPGGPAEPSAPAAPSAAPAPAAP 323 Query: 145 PAAAAPGASACSRRRNGGRRLRQASYLHSPAVIFICGGNEVVSGAPSVAEPDIQIALPAP 204 A AP ++A S+ ++ PA+ ++ AP + P LP Sbjct: 324 APAPAPQSAASSQPQSAST---------PPAL----APGSLLGAAPGLPSP----LLPQT 366 Query: 205 PAPARWSREPQAARARTASPLCPATARASSSSPAPLFPSPSPFPP 249 A P + A TA+ L P +A P P+ S F P Sbjct: 367 SASGVIFPNPLVSIAATANALDPLSALMKHRKGKP--PNVSVFEP 409 >gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens] Length = 1013 Score = 39.3 bits (90), Expect = 0.004 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 4/75 (5%) Query: 201 LPAPPAPARWSREPQAARARTASPLCPATARASSSSPAPLFPSPSPFPPLLCRARLSPRN 260 LP PPA + P A ++S +++ +SSSS + S S PP P + Sbjct: 65 LPLPPATGGAAPNPATTTAASSSSSSSSSSSSSSSSASSSSSSSSSSPP----PASPPAS 120 Query: 261 QPPCRVRLPGIPHAA 275 PP + LPG+P AA Sbjct: 121 SPPRVLELPGVPAAA 135 >gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens] Length = 1013 Score = 39.3 bits (90), Expect = 0.004 Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 4/75 (5%) Query: 201 LPAPPAPARWSREPQAARARTASPLCPATARASSSSPAPLFPSPSPFPPLLCRARLSPRN 260 LP PPA + P A ++S +++ +SSSS + S S PP P + Sbjct: 65 LPLPPATGGAAPNPATTTAASSSSSSSSSSSSSSSSASSSSSSSSSSPP----PASPPAS 120 Query: 261 QPPCRVRLPGIPHAA 275 PP + LPG+P AA Sbjct: 121 SPPRVLELPGVPAAA 135 >gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] Length = 538 Score = 39.3 bits (90), Expect = 0.004 Identities = 33/92 (35%), Positives = 41/92 (44%), Gaps = 8/92 (8%) Query: 189 APSVAEPDIQIALPAPPAP---ARWSREPQAARARTASPLCPATARAS--SSSPAPL-FP 242 A + A P A P PPAP A +R P+AA A +P P A+ + APL P Sbjct: 121 AAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAP 180 Query: 243 SPSPFPPLLCRARLSPRNQPPCRV--RLPGIP 272 P+P P PR PP V R P +P Sbjct: 181 PPAPAAPPAVAPPAGPRRAPPPAVAAREPPLP 212 Score = 35.8 bits (81), Expect = 0.049 Identities = 41/136 (30%), Positives = 44/136 (32%), Gaps = 9/136 (6%) Query: 117 RAHGTEAGGPAFPRGR---AVHYVGQGASAPPAAAAPGASACSRRRNGGRRLRQASYLHS 173 R T P PRG A APP AP A+A R R A+ Sbjct: 103 RRGATPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPAR---APRAAAAAATAP 159 Query: 174 PAVIFICGGNEVVSGAPSVAEPDIQIALPAPPAPARWSREPQAARARTASPLCP---ATA 230 P+ G AP A P A PA PA R P A A PL P A Sbjct: 160 PSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPA 219 Query: 231 RASSSSPAPLFPSPSP 246 P P P P P Sbjct: 220 PPQQQQPPPPQPQPPP 235 Score = 34.7 bits (78), Expect = 0.11 Identities = 27/80 (33%), Positives = 36/80 (45%), Gaps = 2/80 (2%) Query: 185 VVSGAPSVAEPDIQIALPAPPAPARWSREPQAARARTASPLCPATARASSSSPAPLFPSP 244 V + AP+ A A APP+P P+A RA + PA A + +P P P Sbjct: 140 VAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAAPPAVAP-PAGPRR 198 Query: 245 SPFPPLLCR-ARLSPRNQPP 263 +P P + R L P QPP Sbjct: 199 APPPAVAAREPPLPPPPQPP 218 Score = 32.7 bits (73), Expect = 0.42 Identities = 30/104 (28%), Positives = 38/104 (36%), Gaps = 17/104 (16%) Query: 204 PPAPARWSREPQAARARTASP--------------LCPATARASSSSPAPLFPSPSPFPP 249 PPAP R R AA A A P PA A ++++ A PSP P P Sbjct: 108 PPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQP 167 Query: 250 LLCRARLSPRNQPPCRVRLPGIPHAARVTVNTRQSRKSKKAANQ 293 R +P PP P P A R++ AA + Sbjct: 168 GPRAQRAAPLAAPP---PAPAAPPAVAPPAGPRRAPPPAVAARE 208 >gi|47716512 mex-3 homolog B [Homo sapiens] Length = 569 Score = 38.9 bits (89), Expect = 0.006 Identities = 40/146 (27%), Positives = 53/146 (36%), Gaps = 24/146 (16%) Query: 136 YVGQGASAPPAAA------APGASACSRRRNGGRRLRQASYLHSPAVIFICGGNEVV--- 186 Y G G S+ AA +P + A S NG Y ++ GG V Sbjct: 300 YFGGGTSSSAAATQRLADYSPPSPALSFAHNGNNNNNGNGYTYT------AGGEASVPSP 353 Query: 187 SGAPSVAEPDIQIALPAPPAPARWS---REPQAARARTASPLCPATARASSSSPAPLFPS 243 G P + P P AP W+ R P A S C ++A +S+SS + +FP Sbjct: 354 DGCPELQPTFDPAPAPPPGAPLIWAQFERSPGGGPAAPVSSSCSSSASSSASSSSVVFPG 413 Query: 244 PSPFPP------LLCRARLSPRNQPP 263 P LL RL P P Sbjct: 414 GGASAPSNANLGLLVHRRLHPGTSCP 439 >gi|24586659 scavenger receptor class F, member 2 isoform 1 [Homo sapiens] Length = 870 Score = 38.9 bits (89), Expect = 0.006 Identities = 54/189 (28%), Positives = 69/189 (36%), Gaps = 29/189 (15%) Query: 76 HSDAALSRWPQAWGAGRSTPAARLQARRERGAGMLASNLTTRAHGTEAGGPAF------P 129 HS AA R P G + AA ++R+R AH E G P P Sbjct: 677 HSAAAAGRAPSPPPPG--SEAAPSPSKRKRTPS------DKSAHTVEHGSPRTRDPTPRP 728 Query: 130 RGRAVHYVGQGASAPPAAAAPGA----SACSRRRNGGRRLRQASYLHSPA--VIFICGGN 183 G A +PP A A A A RRR+ +R AS L + G Sbjct: 729 PGLPEEATALAAPSPPRARARAAPRPLGAHGRRRSPAKRAEAASMLAADVRGKTRSLGRA 788 Query: 184 EVVSGAPSVAEPDIQIALPAPPAPARWSREPQAARARTASPLCPATARASSSSPAPLFP- 242 EV GA E PAPP A+ S P + + P +A++ PAP P Sbjct: 789 EVALGAQGPREK------PAPPQKAKRSVPPASPARAPPATETPGPEKAATDLPAPETPR 842 Query: 243 --SPSPFPP 249 +P PP Sbjct: 843 KKTPIQKPP 851 >gi|33598937 scavenger receptor class F, member 2 isoform 2 [Homo sapiens] Length = 865 Score = 38.9 bits (89), Expect = 0.006 Identities = 54/189 (28%), Positives = 69/189 (36%), Gaps = 29/189 (15%) Query: 76 HSDAALSRWPQAWGAGRSTPAARLQARRERGAGMLASNLTTRAHGTEAGGPAF------P 129 HS AA R P G + AA ++R+R AH E G P P Sbjct: 672 HSAAAAGRAPSPPPPG--SEAAPSPSKRKRTPS------DKSAHTVEHGSPRTRDPTPRP 723 Query: 130 RGRAVHYVGQGASAPPAAAAPGA----SACSRRRNGGRRLRQASYLHSPA--VIFICGGN 183 G A +PP A A A A RRR+ +R AS L + G Sbjct: 724 PGLPEEATALAAPSPPRARARAAPRPLGAHGRRRSPAKRAEAASMLAADVRGKTRSLGRA 783 Query: 184 EVVSGAPSVAEPDIQIALPAPPAPARWSREPQAARARTASPLCPATARASSSSPAPLFP- 242 EV GA E PAPP A+ S P + + P +A++ PAP P Sbjct: 784 EVALGAQGPREK------PAPPQKAKRSVPPASPARAPPATETPGPEKAATDLPAPETPR 837 Query: 243 --SPSPFPP 249 +P PP Sbjct: 838 KKTPIQKPP 846 >gi|209862765 RUN and SH3 domain containing 2 [Homo sapiens] Length = 1516 Score = 38.9 bits (89), Expect = 0.006 Identities = 39/154 (25%), Positives = 63/154 (40%), Gaps = 20/154 (12%) Query: 163 RRLRQASYLHSPAVIFICGGNEVVSGAPSVAEPDIQIALPAPPAPARWSREPQAARAR-T 221 ++L +A LHS + ++ G +A P Q+++PAP S EPQA+ R T Sbjct: 705 KQLAKARALHSLSQLYSLSGCSRTQQPAPLAAPAAQVSVPAP------SGEPQASTPRAT 758 Query: 222 ASPLCPATARASSSSPAPL-----FPSPSPFPPLLCRARLS----PRNQPPCRVRLP--- 269 A + +S P+PL S PF P + + P QP LP Sbjct: 759 GRGARKAGSEPETSRPSPLGSYSPIRSVGPFGPSTDSSASTSCSPPPEQPTATESLPPWS 818 Query: 270 -GIPHAARVTVNTRQSRKSKKAANQRDFSIWKTG 302 P A R + + ++ +K ++ + TG Sbjct: 819 HSCPSAVRPATSQQPQKEDQKILTLTEYRLHGTG 852 >gi|55741719 RUN and SH3 domain containing 2 [Homo sapiens] Length = 1516 Score = 38.9 bits (89), Expect = 0.006 Identities = 39/154 (25%), Positives = 63/154 (40%), Gaps = 20/154 (12%) Query: 163 RRLRQASYLHSPAVIFICGGNEVVSGAPSVAEPDIQIALPAPPAPARWSREPQAARAR-T 221 ++L +A LHS + ++ G +A P Q+++PAP S EPQA+ R T Sbjct: 705 KQLAKARALHSLSQLYSLSGCSRTQQPAPLAAPAAQVSVPAP------SGEPQASTPRAT 758 Query: 222 ASPLCPATARASSSSPAPL-----FPSPSPFPPLLCRARLS----PRNQPPCRVRLP--- 269 A + +S P+PL S PF P + + P QP LP Sbjct: 759 GRGARKAGSEPETSRPSPLGSYSPIRSVGPFGPSTDSSASTSCSPPPEQPTATESLPPWS 818 Query: 270 -GIPHAARVTVNTRQSRKSKKAANQRDFSIWKTG 302 P A R + + ++ +K ++ + TG Sbjct: 819 HSCPSAVRPATSQQPQKEDQKILTLTEYRLHGTG 852 >gi|51702526 Wiskott-Aldrich syndrome gene-like protein [Homo sapiens] Length = 505 Score = 38.5 bits (88), Expect = 0.008 Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 9/80 (11%) Query: 188 GAPSVAEPDIQIALPAPPAPARWSREPQAARARTASPLCPATARASSSSPAP----LFPS 243 G P P P PPA R + P +RA TA+P P +R S + P P ++P Sbjct: 286 GPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPP 345 Query: 244 PSPFPPLLCRARLSPRNQPP 263 P P P +P PP Sbjct: 346 PPPALP-----SSAPSGPPP 360 Score = 33.9 bits (76), Expect = 0.19 Identities = 30/96 (31%), Positives = 35/96 (36%), Gaps = 17/96 (17%) Query: 183 NEVVSGAPSVAEPDIQIALPAPPAPARWSREPQAARARTASPLCPATARASSSSPAPLFP 242 NE+ AP P P PP P P AR R A P P +RA +++P P P Sbjct: 270 NELRRQAPPPPPPSRGGPPPPPPPPHNSGPPPPPARGRGAPP--PPPSRAPTAAPPPPPP 327 Query: 243 S---------------PSPFPPLLCRARLSPRNQPP 263 S P P P L A P PP Sbjct: 328 SRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPPP 363 Score = 32.7 bits (73), Expect = 0.42 Identities = 22/87 (25%), Positives = 35/87 (40%), Gaps = 1/87 (1%) Query: 187 SGAPSVAEPDIQIALPAPPAPARWSREPQAARARTASPLCP-ATARASSSSPAPLFPSPS 245 +G + +++ P PP P+R P + P P A R + P P+ + Sbjct: 262 TGGVEAVKNELRRQAPPPPPPSRGGPPPPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAA 321 Query: 246 PFPPLLCRARLSPRNQPPCRVRLPGIP 272 P PP R ++ PP R+ P P Sbjct: 322 PPPPPPSRPSVAVPPPPPNRMYPPPPP 348 >gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] Length = 2752 Score = 38.5 bits (88), Expect = 0.008 Identities = 79/305 (25%), Positives = 111/305 (36%), Gaps = 67/305 (21%) Query: 27 QKAGGDFLPGSKPGQEERRR----EACVPSRTRLA--SVATRGAQQGPGFGRRVLHSDAA 80 Q+AGG + G P + +R E SR LA +++ A+ P L + + Sbjct: 2150 QQAGGSMMDGPGPRIPDHQRTSVPENHAQSRIALALTAISLGTARPPPSMSAAGLAARMS 2209 Query: 81 LSRWPQAWGAGRSTPAARLQARRERGAGMLASNLTTRAHGTEAGGPAFPRGRAVHYVGQG 140 P + R+ PAA L A R A A NL + A PA P V Sbjct: 2210 QVPAPVPLMSLRTAPAANL-ASRIPAASAAAMNLAS------ARTPAIPTA-----VNLA 2257 Query: 141 ASAPPAAAAPGASACSRRRNGGRRLRQASYLHSPAVIFICGGNEVVSGAPSVAEPDIQIA 200 S PAAAA A R +P+ + + + A ++A A Sbjct: 2258 DSRTPAAAAAMNLASPRTAV------------APSAVNLADPRTPTAPAVNLAGARTPAA 2305 Query: 201 LPA--------PPAPARW---SREPQA--------------------ARARTASPLCPAT 229 L A PP A + SR PQA A +RTA+ L PA+ Sbjct: 2306 LAALSLTGSGTPPTAANYPSSSRTPQAPASANLVGPRSAHATAPVNIAGSRTAAALAPAS 2365 Query: 230 ARASSSSPAPLFPS-PSPFPPLLCRARLSPRNQPPCRVRL-----PGIPHAARVTVNTRQ 283 ++ +PA + SP PL R+S R PP R P P +R+T Sbjct: 2366 LTSARMAPALSGANLTSPRVPLSAYERVSGRTSPPLLDRARSRTPPSAPSQSRMTSERAP 2425 Query: 284 SRKSK 288 S S+ Sbjct: 2426 SPSSR 2430 Score = 30.0 bits (66), Expect = 2.7 Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 9/106 (8%) Query: 187 SGAPSVAEPDIQIALPAPPAPARWSREPQAARARTASPLCPATARASSSSPAPLFPSPSP 246 SG+ S EP PAP A R SR +++ R SP +SS+ +P P S Sbjct: 1616 SGSDSSPEPKA----PAPRALPRRSRSGSSSKGRGPSP-----EGSSSTESSPEHPPKSR 1666 Query: 247 FPPLLCRARLSPRNQPPCRVRLPGIPHAARVTVNTRQSRKSKKAAN 292 R+ P+ + R + +T R SR+S+ A++ Sbjct: 1667 TARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASS 1712 Score = 28.9 bits (63), Expect = 6.0 Identities = 29/100 (29%), Positives = 39/100 (39%), Gaps = 10/100 (10%) Query: 195 PDIQIALPAPPAPARWSREPQAARARTASPLCPATARASSSSPAPLFPSPSPFPPLLCRA 254 P + + P P SR P +SP R SS+P PS S P +A Sbjct: 867 PQRRSCFESSPDPELKSRTPSRHSCSGSSP-----PRVKSSTPPRQSPSRSSSPQPKVKA 921 Query: 255 RLSPRNQPPCRVRLPGIPHAARVTVNT--RQSRKSKKAAN 292 +SPR + P +RVT T R+SR +N Sbjct: 922 IISPRQRSHSG---SSSPSPSRVTSRTTPRRSRSVSPCSN 958 Score = 28.9 bits (63), Expect = 6.0 Identities = 62/252 (24%), Positives = 88/252 (34%), Gaps = 42/252 (16%) Query: 23 RGSYQKAGGDFLPGSKPGQEERRREACVPSRTRLASVATRGAQQGPGFGRRVLHSDAALS 82 R + ++ GG P ++E R + SR R RG + P R+ S + + Sbjct: 1809 RVTRRRRGGSGYHSRSPARQESSRTS---SRRR------RGRSRTPPTSRKRSRSRTSPA 1859 Query: 83 RWPQAWGAGRSTPAARLQARRERGAGMLASNLTTRAHGTEAGGPAFPRGRAVHYVGQGAS 142 W ++ R++PA RR R L S +R+ T R R S Sbjct: 1860 PWKRS--RSRASPATH---RRSRSRTPLISRRRSRSR-TSPVSRRRSRSRT--------S 1905 Query: 143 APPAAAAPGASACSRRRNGGRRLRQASYLHSPAVIFICGGNEVVSGAPSVAEPDIQIALP 202 + AS SRRR+ R +P V S P+ P Sbjct: 1906 VTRRRSRSRASPVSRRRSRSR---------TPPVT----RRRSRSRTPTTRRRSRSRTPP 1952 Query: 203 APPAPARWSREPQAARARTASPLCPATARASSSSPAPLF-----PSPSPFPPLLCRARLS 257 +R SR P R R+ S P T R S S +P+ SP R+R S Sbjct: 1953 VTRRRSR-SRTPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTS 2011 Query: 258 PRNQPPCRVRLP 269 P + R R P Sbjct: 2012 PVTRRRSRSRTP 2023 Score = 28.5 bits (62), Expect = 7.9 Identities = 25/93 (26%), Positives = 36/93 (38%), Gaps = 5/93 (5%) Query: 207 PARWSREPQAARARTASPLCPATARASSSSPAPLFPS-----PSPFPPLLCRARLSPRNQ 261 P R R P + A + R S+SSP S PSP P L R+R R + Sbjct: 1721 PPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRRE 1780 Query: 262 PPCRVRLPGIPHAARVTVNTRQSRKSKKAANQR 294 R +++ T RQ +S+ +R Sbjct: 1781 KTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRR 1813 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.318 0.131 0.413 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 15,139,174 Number of Sequences: 37866 Number of extensions: 927066 Number of successful extensions: 8532 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 81 Number of HSP's successfully gapped in prelim test: 640 Number of HSP's that attempted gapping in prelim test: 6964 Number of HSP's gapped (non-prelim): 1886 length of query: 308 length of database: 18,247,518 effective HSP length: 102 effective length of query: 206 effective length of database: 14,385,186 effective search space: 2963348316 effective search space used: 2963348316 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.