Guide to the Human Genome
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Name: TXNDC16 Sequence: fasta or formatted (820aa) NCBI GI: 237648961
Description:

thioredoxin domain containing 16 isoform 2

Referenced in:

Glutathione Pathways

Other entries for this name:
alt prot [825aa] thioredoxin domain containing 16 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.7         55           2
 C cysteine            1.3         11           1
 D aspartate           5.1         42           2
 E glutamate           8.3         68           2
 F phenylalanine       4.8         39           2
 G glycine             4.1         34           2
 H histidine           1.8         15           1
 I isoleucine          6.3         52           2
 K lysine              6.2         51           2
 L leucine            12.2        100           4
 M methionine          2.2         18           1
 N asparagine          4.1         34           2
 P proline             4.8         39           2
 Q glutamine           4.0         33           2
 R arginine            3.7         30           2
 S serine              5.9         48           2
 T threonine           5.9         48           2
 V valine              7.8         64           2
 W tryptophan          1.1          9           1
 Y tyrosine            3.7         30           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   thioredoxin domain containing 16 isoform 2 
TXNDC16               0.996   thioredoxin domain containing 16 isoform 1 
PDIA3                 0.023   protein disulfide-isomerase A3 precursor 
PDIA4                 0.017   protein disulfide isomerase A4 
P4HB                  0.014   prolyl 4-hydroxylase, beta subunit precursor 
TXNDC5                0.014   thioredoxin domain containing 5 isoform 1 precursor ...
TXNDC5                0.013   thioredoxin domain containing 5 isoform 3 
PDIA6                 0.011   protein disulfide isomerase A6 
TXNDC11               0.009   thioredoxin domain containing 11 
DNAJC10               0.008   DnaJ (Hsp40) homolog, subfamily C, member 10 
PDIA5                 0.006   protein disulfide isomerase A5 
ERP44                 0.006   thioredoxin domain containing 4 (endoplasmic reticul...
QSOX1                 0.004   quiescin Q6 sulfhydryl oxidase 1 isoform b 
QSOX1                 0.004   quiescin Q6 sulfhydryl oxidase 1 isoform a 
SCYL1                 0.004   SCY1-like 1 isoform A 
OMD                   0.004   osteomodulin 
NBN                   0.004   nibrin 
TMX2                  0.004   thioredoxin domain containing 14 isoform 2 
TMX2                  0.004   thioredoxin domain containing 14 isoform 1 
CALD1                 0.003   caldesmon 1 isoform 5 
CALD1                 0.003   caldesmon 1 isoform 4 
CALD1                 0.003   caldesmon 1 isoform 3 
CALD1                 0.003   caldesmon 1 isoform 2 
CALD1                 0.003   caldesmon 1 isoform 1 
C6orf203              0.003   hypothetical protein LOC51250 isoform b 
C6orf203              0.003   hypothetical protein LOC51250 isoform a 
C6orf203              0.003   hypothetical protein LOC51250 isoform a 
KPNA6                 0.003   karyopherin alpha 6 
PCLO                  0.003   piccolo isoform 2 
PCLO                  0.003   piccolo isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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