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Search of human proteins with 115647960
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|115647960 NTPase, KAP family P-loop domain containing 1
isoform 2 [Homo sapiens]
(610 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|197100650 NTPase, KAP family P-loop domain containing 1 isofo... 1241 0.0
gi|115647960 NTPase, KAP family P-loop domain containing 1 isofo... 1241 0.0
gi|55741641 kinase D-interacting substrate of 220 kDa [Homo sapi... 126 5e-29
gi|239756268 PREDICTED: hypothetical protein XP_002344877 [Homo ... 35 0.26
gi|239757128 PREDICTED: similar to mCG141871 [Homo sapiens] 32 1.3
gi|169173182 PREDICTED: hypothetical protein [Homo sapiens] 32 1.3
gi|113428072 PREDICTED: similar to mCG141871 [Homo sapiens] 32 1.3
gi|22035606 mitogen-activated protein kinase kinase kinase kinas... 32 1.3
gi|210031154 zinc finger protein 541 [Homo sapiens] 32 1.3
gi|239745177 PREDICTED: hypothetical protein XP_002343381 [Homo ... 32 1.7
gi|148806908 fibronectin type III domain containing 1 [Homo sapi... 32 1.7
gi|113428456 PREDICTED: similar to mCG141871 [Homo sapiens] 32 2.2
gi|239749293 PREDICTED: hypothetical protein XP_002346984 [Homo ... 31 2.9
gi|239743383 PREDICTED: hypothetical protein XP_002342846 [Homo ... 31 2.9
gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens] 31 3.8
gi|171543879 CD99 antigen isoform b precursor [Homo sapiens] 31 3.8
gi|4505183 CD99 antigen isoform a precursor [Homo sapiens] 31 3.8
gi|148886692 FAT tumor suppressor homolog 3 [Homo sapiens] 31 3.8
gi|48762934 alpha 2 type I collagen [Homo sapiens] 30 5.0
gi|169163728 PREDICTED: hypothetical protein [Homo sapiens] 30 5.0
gi|169163708 PREDICTED: hypothetical protein [Homo sapiens] 30 5.0
gi|169163019 PREDICTED: hypothetical protein [Homo sapiens] 30 5.0
gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s... 30 5.0
gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s... 30 5.0
gi|21314720 Smad nuclear interacting protein [Homo sapiens] 30 5.0
gi|224465238 hypothetical protein LOC283999 [Homo sapiens] 30 6.5
gi|4503257 death-domain associated protein isoform a [Homo sapiens] 30 6.5
gi|215422388 death-domain associated protein isoform a [Homo sap... 30 6.5
gi|215422366 death-domain associated protein isoform b [Homo sap... 30 6.5
gi|169213235 PREDICTED: hypothetical protein [Homo sapiens] 30 6.5
>gi|197100650 NTPase, KAP family P-loop domain containing 1 isoform
1 [Homo sapiens]
Length = 619
Score = 1241 bits (3211), Expect = 0.0
Identities = 610/610 (100%), Positives = 610/610 (100%)
Query: 1 MQQEAAQRESEELQHVQWRPRAVSGWGVPQLLWYLVFLQPIITEVHLRRRNVQFLFIRFS 60
MQQEAAQRESEELQHVQWRPRAVSGWGVPQLLWYLVFLQPIITEVHLRRRNVQFLFIRFS
Sbjct: 10 MQQEAAQRESEELQHVQWRPRAVSGWGVPQLLWYLVFLQPIITEVHLRRRNVQFLFIRFS 69
Query: 61 AWQYAGTDKLWAGLVTTLCEGIRRHYGALPFSVYSVLGNKPATRQDCCQSEWHCRRRVCL 120
AWQYAGTDKLWAGLVTTLCEGIRRHYGALPFSVYSVLGNKPATRQDCCQSEWHCRRRVCL
Sbjct: 70 AWQYAGTDKLWAGLVTTLCEGIRRHYGALPFSVYSVLGNKPATRQDCCQSEWHCRRRVCL 129
Query: 121 GLLALLAALGLGVGLLYLSLGGHALGHGSPSGSLLKVFGGAATTLSGSGLLMAVYSVGKH 180
GLLALLAALGLGVGLLYLSLGGHALGHGSPSGSLLKVFGGAATTLSGSGLLMAVYSVGKH
Sbjct: 130 GLLALLAALGLGVGLLYLSLGGHALGHGSPSGSLLKVFGGAATTLSGSGLLMAVYSVGKH 189
Query: 181 LFVSQRKKIERLVSREKFGSQLGFMCEVKKEVELLTDFLCFLEIYQRRRLRVVLEVTGLD 240
LFVSQRKKIERLVSREKFGSQLGFMCEVKKEVELLTDFLCFLEIYQRRRLRVVLEVTGLD
Sbjct: 190 LFVSQRKKIERLVSREKFGSQLGFMCEVKKEVELLTDFLCFLEIYQRRRLRVVLEVTGLD 249
Query: 241 TCYPERVVGVLNAINTLLSDSHAPFIFILVVDPSILAACLESAGNMKGTADNGYLFLNRT 300
TCYPERVVGVLNAINTLLSDSHAPFIFILVVDPSILAACLESAGNMKGTADNGYLFLNRT
Sbjct: 250 TCYPERVVGVLNAINTLLSDSHAPFIFILVVDPSILAACLESAGNMKGTADNGYLFLNRT 309
Query: 301 VTLPFSVPIMGRRTKLQFLHDAVQSRDDLLYREMTRKPWLPGDAGGESAQLLAVQAQAGT 360
VTLPFSVPIMGRRTKLQFLHDAVQSRDDLLYREMTRKPWLPGDAGGESAQLLAVQAQAGT
Sbjct: 310 VTLPFSVPIMGRRTKLQFLHDAVQSRDDLLYREMTRKPWLPGDAGGESAQLLAVQAQAGT 369
Query: 361 ERGQGRIDDEAARRIQEALFCLHDERDCLYEYVPDNVVSMRRIVNTVPITVRLLQQQQQQ 420
ERGQGRIDDEAARRIQEALFCLHDERDCLYEYVPDNVVSMRRIVNTVPITVRLLQQQQQQ
Sbjct: 370 ERGQGRIDDEAARRIQEALFCLHDERDCLYEYVPDNVVSMRRIVNTVPITVRLLQQQQQQ 429
Query: 421 GDFGGPTPRQAVAWVVLANQWPCRLSWALQCLEDRQQTGGAPEGRARLWDVFRDNSRELH 480
GDFGGPTPRQAVAWVVLANQWPCRLSWALQCLEDRQQTGGAPEGRARLWDVFRDNSRELH
Sbjct: 430 GDFGGPTPRQAVAWVVLANQWPCRLSWALQCLEDRQQTGGAPEGRARLWDVFRDNSRELH 489
Query: 481 TMTKALQNVLDLDGDPELFERFLGADFPFTVAEAQSLLRCTVNLDHSIRRRMGLIRAVSA 540
TMTKALQNVLDLDGDPELFERFLGADFPFTVAEAQSLLRCTVNLDHSIRRRMGLIRAVSA
Sbjct: 490 TMTKALQNVLDLDGDPELFERFLGADFPFTVAEAQSLLRCTVNLDHSIRRRMGLIRAVSA 549
Query: 541 LKPPSPPKSPTRDTPHAAHRANSASRAPPSGRASGQAGEGHHTGDLAHRGKLWPVACALF 600
LKPPSPPKSPTRDTPHAAHRANSASRAPPSGRASGQAGEGHHTGDLAHRGKLWPVACALF
Sbjct: 550 LKPPSPPKSPTRDTPHAAHRANSASRAPPSGRASGQAGEGHHTGDLAHRGKLWPVACALF 609
Query: 601 RPGQSSPGGP 610
RPGQSSPGGP
Sbjct: 610 RPGQSSPGGP 619
>gi|115647960 NTPase, KAP family P-loop domain containing 1 isoform
2 [Homo sapiens]
Length = 610
Score = 1241 bits (3211), Expect = 0.0
Identities = 610/610 (100%), Positives = 610/610 (100%)
Query: 1 MQQEAAQRESEELQHVQWRPRAVSGWGVPQLLWYLVFLQPIITEVHLRRRNVQFLFIRFS 60
MQQEAAQRESEELQHVQWRPRAVSGWGVPQLLWYLVFLQPIITEVHLRRRNVQFLFIRFS
Sbjct: 1 MQQEAAQRESEELQHVQWRPRAVSGWGVPQLLWYLVFLQPIITEVHLRRRNVQFLFIRFS 60
Query: 61 AWQYAGTDKLWAGLVTTLCEGIRRHYGALPFSVYSVLGNKPATRQDCCQSEWHCRRRVCL 120
AWQYAGTDKLWAGLVTTLCEGIRRHYGALPFSVYSVLGNKPATRQDCCQSEWHCRRRVCL
Sbjct: 61 AWQYAGTDKLWAGLVTTLCEGIRRHYGALPFSVYSVLGNKPATRQDCCQSEWHCRRRVCL 120
Query: 121 GLLALLAALGLGVGLLYLSLGGHALGHGSPSGSLLKVFGGAATTLSGSGLLMAVYSVGKH 180
GLLALLAALGLGVGLLYLSLGGHALGHGSPSGSLLKVFGGAATTLSGSGLLMAVYSVGKH
Sbjct: 121 GLLALLAALGLGVGLLYLSLGGHALGHGSPSGSLLKVFGGAATTLSGSGLLMAVYSVGKH 180
Query: 181 LFVSQRKKIERLVSREKFGSQLGFMCEVKKEVELLTDFLCFLEIYQRRRLRVVLEVTGLD 240
LFVSQRKKIERLVSREKFGSQLGFMCEVKKEVELLTDFLCFLEIYQRRRLRVVLEVTGLD
Sbjct: 181 LFVSQRKKIERLVSREKFGSQLGFMCEVKKEVELLTDFLCFLEIYQRRRLRVVLEVTGLD 240
Query: 241 TCYPERVVGVLNAINTLLSDSHAPFIFILVVDPSILAACLESAGNMKGTADNGYLFLNRT 300
TCYPERVVGVLNAINTLLSDSHAPFIFILVVDPSILAACLESAGNMKGTADNGYLFLNRT
Sbjct: 241 TCYPERVVGVLNAINTLLSDSHAPFIFILVVDPSILAACLESAGNMKGTADNGYLFLNRT 300
Query: 301 VTLPFSVPIMGRRTKLQFLHDAVQSRDDLLYREMTRKPWLPGDAGGESAQLLAVQAQAGT 360
VTLPFSVPIMGRRTKLQFLHDAVQSRDDLLYREMTRKPWLPGDAGGESAQLLAVQAQAGT
Sbjct: 301 VTLPFSVPIMGRRTKLQFLHDAVQSRDDLLYREMTRKPWLPGDAGGESAQLLAVQAQAGT 360
Query: 361 ERGQGRIDDEAARRIQEALFCLHDERDCLYEYVPDNVVSMRRIVNTVPITVRLLQQQQQQ 420
ERGQGRIDDEAARRIQEALFCLHDERDCLYEYVPDNVVSMRRIVNTVPITVRLLQQQQQQ
Sbjct: 361 ERGQGRIDDEAARRIQEALFCLHDERDCLYEYVPDNVVSMRRIVNTVPITVRLLQQQQQQ 420
Query: 421 GDFGGPTPRQAVAWVVLANQWPCRLSWALQCLEDRQQTGGAPEGRARLWDVFRDNSRELH 480
GDFGGPTPRQAVAWVVLANQWPCRLSWALQCLEDRQQTGGAPEGRARLWDVFRDNSRELH
Sbjct: 421 GDFGGPTPRQAVAWVVLANQWPCRLSWALQCLEDRQQTGGAPEGRARLWDVFRDNSRELH 480
Query: 481 TMTKALQNVLDLDGDPELFERFLGADFPFTVAEAQSLLRCTVNLDHSIRRRMGLIRAVSA 540
TMTKALQNVLDLDGDPELFERFLGADFPFTVAEAQSLLRCTVNLDHSIRRRMGLIRAVSA
Sbjct: 481 TMTKALQNVLDLDGDPELFERFLGADFPFTVAEAQSLLRCTVNLDHSIRRRMGLIRAVSA 540
Query: 541 LKPPSPPKSPTRDTPHAAHRANSASRAPPSGRASGQAGEGHHTGDLAHRGKLWPVACALF 600
LKPPSPPKSPTRDTPHAAHRANSASRAPPSGRASGQAGEGHHTGDLAHRGKLWPVACALF
Sbjct: 541 LKPPSPPKSPTRDTPHAAHRANSASRAPPSGRASGQAGEGHHTGDLAHRGKLWPVACALF 600
Query: 601 RPGQSSPGGP 610
RPGQSSPGGP
Sbjct: 601 RPGQSSPGGP 610
>gi|55741641 kinase D-interacting substrate of 220 kDa [Homo sapiens]
Length = 1771
Score = 126 bits (317), Expect = 5e-29
Identities = 144/564 (25%), Positives = 249/564 (44%), Gaps = 52/564 (9%)
Query: 27 GVPQLLWYLVFLQPI-ITEVHLRRRNVQFLFIRFSAWQYAGTDKLWAGLVTTLCEGIRRH 85
G +LL L+F+ P + E + V+FLF ++ G + A ++ TL + R
Sbjct: 569 GYLELLLKLMFVNPPELPEQTTKALPVRFLFTDYNRLSSVGGETSLAEMIATLSDACERE 628
Query: 86 YGALPFSVYSVLGNKPATRQDCCQSEWHCRRRVCL-GLLALLAALGLGV-GLLYLSLGGH 143
+G L ++ V + + Q + ++ CL + L +G + G+ L++
Sbjct: 629 FGFLATRLFRVF------KTEDTQGKKKWKKTCCLPSFVIFLFIIGCIISGITLLAIFRV 682
Query: 144 ALGHGSPSGSLLKVFG--GAATTLSGSGLLMAVYSVGKHLFVSQRKKIERLVSREKFGSQ 201
H + + L+ + G A L+ + V L SQRK++ S+
Sbjct: 683 DPKHLTVNAVLISIASVVGLAFVLN----CRTWWQVLDSLLNSQRKRLHNAASKLHKLKS 738
Query: 202 LGFMCEVKKEVELLTDFLCFLEIYQRRRLRVVLEVTGLDTCYPERVVGVLNAINTLLSDS 261
GFM +K EVEL+ ++ + + + R+V+ + GLD C ++V+ +L+ + L S
Sbjct: 739 EGFMKVLKCEVELMARMAKTIDSFTQNQTRLVVIIDGLDACEQDKVLQMLDTVRVLF--S 796
Query: 262 HAPFIFILVVDPSILAACLESAGN--MKGTADNGYLFLNRTVTLPFSVPIMGRRTKLQFL 319
PFI I DP I+ + N ++ + NG+ ++ V LP + G +FL
Sbjct: 797 KGPFIAIFASDPHIIIKAINQNLNSVLRDSNINGHDYMRNIVHLPVFLNSRGLSNARKFL 856
Query: 320 HDAVQSRDDLLYREMTRKPWLPGDAGGESAQ-LLAVQAQAGTERGQGRIDDEAARRIQEA 378
+ + D + + DA +Q L + G++ R D R++Q
Sbjct: 857 VTSATNGD----VPCSDTTGIQEDADRRVSQNSLGEMTKLGSKTALNRRDTYRRRQMQRT 912
Query: 379 --------LFCLHDERDCLYEYVPDNVVSMRRIVNTVPITVRLLQQQQQQGDFGGPTPRQ 430
L L D + P +MRR++N V +T RLL+ Q ++ +
Sbjct: 913 ITRQMSFDLTKLLVTEDWFSDISPQ---TMRRLLNIVSVTGRLLRANQISFNWD-----R 964
Query: 431 AVAWVVLANQWPCRLSWALQCLEDRQQTGGAPEGRARLWDVFRDNSRELHTMTKALQNVL 490
+W+ L QWP R SW + LE +T G P+ + L ++ S+ + T TK ++ +L
Sbjct: 965 LASWINLTEQWPYRTSWLILYLE---ETEGIPD-QMTLKTIYERISKNIPT-TKDVEPLL 1019
Query: 491 DLDGDPELFERFLGADFPFTVA-EAQSLLRCTVNLDHSIRRRMGLIRAVS---ALKPPSP 546
++DGD FE FL + P VA + + L CTVNLD +R + +RA ++ +
Sbjct: 1020 EIDGDIRNFEVFLSSRTPVLVARDVKVFLPCTVNLDPKLREIIADVRAAREQISIGGLAY 1079
Query: 547 PKSPTRDTPHAAHRANSASRAPPS 570
P P + P RA S PPS
Sbjct: 1080 PPLPLHEGP---PRAPSGYSQPPS 1100
>gi|239756268 PREDICTED: hypothetical protein XP_002344877 [Homo
sapiens]
Length = 252
Score = 34.7 bits (78), Expect = 0.26
Identities = 26/70 (37%), Positives = 29/70 (41%), Gaps = 8/70 (11%)
Query: 529 RRRMGLIRAVSALKPPSP------PKSPTRDTPHAAHRANSASRAPPSGRASGQAGEGHH 582
+R G RA A KPP+P P P AA RAPP A+GQ G G
Sbjct: 128 QREAGAARAARAPKPPAPGSGQALPADPLLQA--AASTLAGRPRAPPPAPAAGQRGLGSG 185
Query: 583 TGDLAHRGKL 592
L R KL
Sbjct: 186 ALGLGRREKL 195
>gi|239757128 PREDICTED: similar to mCG141871 [Homo sapiens]
Length = 306
Score = 32.3 bits (72), Expect = 1.3
Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 11/79 (13%)
Query: 529 RRRMGLIRAVSALKPPSPPKSPTRDTPHAAHRANSASRAPPSGRASGQAGEGHHTGDLAH 588
RR G+ RA + L PP PP P+R P + A SG A G A +G H L
Sbjct: 177 RRLRGVRRAPAPLTPP-PPPPPSRCLPQ-----DEACADTGSGSAEGLAADGPHLHTLTQ 230
Query: 589 RGKLWPVACALFRPGQSSP 607
P+ + RP P
Sbjct: 231 -----PIVVTVPRPPPRPP 244
>gi|169173182 PREDICTED: hypothetical protein [Homo sapiens]
Length = 255
Score = 32.3 bits (72), Expect = 1.3
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 6/42 (14%)
Query: 541 LKPPSPPK----SPTRDTPHAAHRANSASRAPPSGRASGQAG 578
L P+PP+ SP + P A A R PP+GR GQ+G
Sbjct: 144 LSRPAPPRPAHQSPAEEGPRGA--AGGGPRTPPAGRTQGQSG 183
>gi|113428072 PREDICTED: similar to mCG141871 [Homo sapiens]
Length = 358
Score = 32.3 bits (72), Expect = 1.3
Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 11/79 (13%)
Query: 529 RRRMGLIRAVSALKPPSPPKSPTRDTPHAAHRANSASRAPPSGRASGQAGEGHHTGDLAH 588
RR G+ RA + L PP PP P+R P + A SG A G A +G H L
Sbjct: 229 RRLRGVRRAPAPLTPP-PPPPPSRCLPQ-----DEACADTGSGSAEGLAADGPHLHTLTQ 282
Query: 589 RGKLWPVACALFRPGQSSP 607
P+ + RP P
Sbjct: 283 -----PIVVTVPRPPPRPP 296
>gi|22035606 mitogen-activated protein kinase kinase kinase kinase 4
isoform 3 [Homo sapiens]
Length = 1212
Score = 32.3 bits (72), Expect = 1.3
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Query: 540 ALKPPSPPKSPTRDTPHAAHRANSASRAPPSGRASGQAGEGHHTGDLAHRGKLWP-VACA 598
AL+ P+ P+ P R T + + S SG+ + QAG+ + T + R LW V
Sbjct: 583 ALQRPAEPQVPVRTTSRSPVLSRRDSPLQGSGQQNSQAGQRNSTSSIEPR-LLWERVEKL 641
Query: 599 LFRPGQSSPGG 609
+ RPG S G
Sbjct: 642 VPRPGSGSSSG 652
>gi|210031154 zinc finger protein 541 [Homo sapiens]
Length = 1365
Score = 32.3 bits (72), Expect = 1.3
Identities = 25/83 (30%), Positives = 34/83 (40%), Gaps = 4/83 (4%)
Query: 527 SIRRRMGLIRAVSALKPPSPPKSPTRDTPHAAHRANSASRAPPSGRASGQAGEGHHTGD- 585
S+RR + + LK P + D+PHA SA + PPS S E G
Sbjct: 212 SLRRHYEVHHGLCILKEAPPEEEACGDSPHA---HESAGQPPPSSLRSLVPPEARSPGSL 268
Query: 586 LAHRGKLWPVACALFRPGQSSPG 608
L HR L + ++ SPG
Sbjct: 269 LPHRDLLRRIVSSIVHQKTPSPG 291
>gi|239745177 PREDICTED: hypothetical protein XP_002343381 [Homo
sapiens]
Length = 252
Score = 32.0 bits (71), Expect = 1.7
Identities = 25/70 (35%), Positives = 28/70 (40%), Gaps = 8/70 (11%)
Query: 529 RRRMGLIRAVSALKPPSP------PKSPTRDTPHAAHRANSASRAPPSGRASGQAGEGHH 582
+R G A A KPP+P P P AA RAPP A+GQ G G
Sbjct: 128 QREAGAAGAARAPKPPAPGSGQALPADPLLQA--AASTLAGRPRAPPPAPAAGQRGLGSG 185
Query: 583 TGDLAHRGKL 592
L R KL
Sbjct: 186 ALGLGRREKL 195
>gi|148806908 fibronectin type III domain containing 1 [Homo
sapiens]
Length = 1894
Score = 32.0 bits (71), Expect = 1.7
Identities = 16/38 (42%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 534 LIRAVSALKPPSPPKSPTRDTPHA-AHRANSASRAPPS 570
++R S++ P + P SP R TPH+ A +S++ APPS
Sbjct: 680 VLRDRSSVHPGAKPASPARRTPHSGAAEEDSSASAPPS 717
>gi|113428456 PREDICTED: similar to mCG141871 [Homo sapiens]
Length = 358
Score = 31.6 bits (70), Expect = 2.2
Identities = 26/79 (32%), Positives = 33/79 (41%), Gaps = 11/79 (13%)
Query: 529 RRRMGLIRAVSALKPPSPPKSPTRDTPHAAHRANSASRAPPSGRASGQAGEGHHTGDLAH 588
RR G+ RA + L PP PP P+R P + A SG A G A +G H L
Sbjct: 229 RRLRGVRRAPAHLTPP-PPPLPSRCLPQ-----DEACADTGSGSAEGLAADGPHLHTLTQ 282
Query: 589 RGKLWPVACALFRPGQSSP 607
P+ + RP P
Sbjct: 283 -----PIVVTVPRPPPRPP 296
>gi|239749293 PREDICTED: hypothetical protein XP_002346984 [Homo
sapiens]
Length = 585
Score = 31.2 bits (69), Expect = 2.9
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 9/63 (14%)
Query: 523 NLDHSIRRRM-----GLIRAVSALKPPSPPKSPTRDTPHAAHRANSASRAPPSGRASGQA 577
+++ + RRR G R + +PP PP T P A+H +S ++A PSG A +A
Sbjct: 439 SVERAARRRRTRPEPGPARRGARAEPPGPP---TLQDPPASHLGSSPAQA-PSGEAGRRA 494
Query: 578 GEG 580
G G
Sbjct: 495 GGG 497
>gi|239743383 PREDICTED: hypothetical protein XP_002342846 [Homo
sapiens]
Length = 585
Score = 31.2 bits (69), Expect = 2.9
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 9/63 (14%)
Query: 523 NLDHSIRRRM-----GLIRAVSALKPPSPPKSPTRDTPHAAHRANSASRAPPSGRASGQA 577
+++ + RRR G R + +PP PP T P A+H +S ++A PSG A +A
Sbjct: 439 SVERAARRRRTRPEPGPARRGARAEPPGPP---TLQDPPASHLGSSPAQA-PSGEAGRRA 494
Query: 578 GEG 580
G G
Sbjct: 495 GGG 497
>gi|4507869 vasodilator-stimulated phosphoprotein [Homo sapiens]
Length = 380
Score = 30.8 bits (68), Expect = 3.8
Identities = 19/46 (41%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Query: 543 PPSPPKSPTRDTPHAAHRANSA-SRAPPSGRASGQAGEGHHTGDLA 587
PP PP P P AAH A APP A G G G LA
Sbjct: 182 PPPPPGLPPSGVPAAAHGAGGGPPPAPPLPAAQGPGGGGAGAPGLA 227
>gi|171543879 CD99 antigen isoform b precursor [Homo sapiens]
Length = 169
Score = 30.8 bits (68), Expect = 3.8
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 542 KPPSPPKSPTRDTPHAAHRANSASRAPPSGRASGQAGEGHHTGDLAHR 589
+PP+PPK P+ + S S A + SG G+G G +HR
Sbjct: 52 RPPNPPKPMPNPNPNHPSSSGSFSDADLADGVSGGEGKGGSDGGGSHR 99
>gi|4505183 CD99 antigen isoform a precursor [Homo sapiens]
Length = 185
Score = 30.8 bits (68), Expect = 3.8
Identities = 16/48 (33%), Positives = 23/48 (47%)
Query: 542 KPPSPPKSPTRDTPHAAHRANSASRAPPSGRASGQAGEGHHTGDLAHR 589
+PP+PPK P+ + S S A + SG G+G G +HR
Sbjct: 68 RPPNPPKPMPNPNPNHPSSSGSFSDADLADGVSGGEGKGGSDGGGSHR 115
>gi|148886692 FAT tumor suppressor homolog 3 [Homo sapiens]
Length = 4557
Score = 30.8 bits (68), Expect = 3.8
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 7/51 (13%)
Query: 394 PDNVVSMRRIVNTVPITVRLLQQQQQQGDF-------GGPTPRQAVAWVVL 437
P N ++ + T R L ++QQ F GGP+P+Q+ WVV+
Sbjct: 1192 PQNFFAINIKTGLITTTSRKLDREQQAEHFLEVTVTDGGPSPKQSTIWVVV 1242
>gi|48762934 alpha 2 type I collagen [Homo sapiens]
Length = 1366
Score = 30.4 bits (67), Expect = 5.0
Identities = 25/81 (30%), Positives = 33/81 (40%), Gaps = 8/81 (9%)
Query: 532 MGLIRAVSALKPPSPPKSP-TRDTPHAAHR-ANSASRAPPSGRASGQAGEGHHTGDLAHR 589
+G+ A PP SP P A R N + PP G+ G+ H G+ +
Sbjct: 897 LGIAGPPGARGPPGAVGSPGVNGAPGEAGRDGNPGNDGPP-----GRDGQPGHKGERGYP 951
Query: 590 GKLWPVACALFRPGQSSPGGP 610
G + PV A PG P GP
Sbjct: 952 GNIGPVGAA-GAPGPHGPVGP 971
>gi|169163728 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 30.4 bits (67), Expect = 5.0
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Query: 529 RRRMGLIRAVSALKPPSP-PKSPTRDTPHAAHRANS----ASRAPPSGRASGQAG 578
RRR +R + + PSP P P R P +R + A+R PP A GQ G
Sbjct: 44 RRRGTWLRVLRGPRAPSPAPALPARARPPRENRKRAVPARAARGPPKRPAGGQTG 98
>gi|169163708 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 30.4 bits (67), Expect = 5.0
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Query: 529 RRRMGLIRAVSALKPPSP-PKSPTRDTPHAAHRANS----ASRAPPSGRASGQAG 578
RRR +R + + PSP P P R P +R + A+R PP A GQ G
Sbjct: 44 RRRGTWLRVLRGPRAPSPAPALPARARPPRENRKRAVPARAARGPPKRPAGGQTG 98
>gi|169163019 PREDICTED: hypothetical protein [Homo sapiens]
Length = 237
Score = 30.4 bits (67), Expect = 5.0
Identities = 20/55 (36%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
Query: 529 RRRMGLIRAVSALKPPSP-PKSPTRDTPHAAHRANS----ASRAPPSGRASGQAG 578
RRR +R + + PSP P P R P +R + A+R PP A GQ G
Sbjct: 44 RRRGTWLRVLRGPRAPSPAPALPARARPPRENRKRAVPARAARGPPKRPAGGQTG 98
>gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
sapiens]
Length = 1858
Score = 30.4 bits (67), Expect = 5.0
Identities = 24/84 (28%), Positives = 29/84 (34%), Gaps = 26/84 (30%)
Query: 526 HSIRRRMGLIRAVSA------------LKPPSPPKSPT---RDTPHAA-----------H 559
HS+ +G + AV+ L PP PP P PH + H
Sbjct: 1650 HSVAHVVGPVHAVTPGSHIHSQTAGHHLPPPPPPPGPAPHHHPPPHPSTGLQGLQAQHQH 1709
Query: 560 RANSASRAPPSGRASGQAGEGHHT 583
NSA PP S GHHT
Sbjct: 1710 VVNSAPPPPPPPPPSSVLASGHHT 1733
>gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
sapiens]
Length = 1858
Score = 30.4 bits (67), Expect = 5.0
Identities = 24/84 (28%), Positives = 29/84 (34%), Gaps = 26/84 (30%)
Query: 526 HSIRRRMGLIRAVSA------------LKPPSPPKSPT---RDTPHAA-----------H 559
HS+ +G + AV+ L PP PP P PH + H
Sbjct: 1650 HSVAHVVGPVHAVTPGSHIHSQTAGHHLPPPPPPPGPAPHHHPPPHPSTGLQGLQAQHQH 1709
Query: 560 RANSASRAPPSGRASGQAGEGHHT 583
NSA PP S GHHT
Sbjct: 1710 VVNSAPPPPPPPPPSSVLASGHHT 1733
>gi|21314720 Smad nuclear interacting protein [Homo sapiens]
Length = 396
Score = 30.4 bits (67), Expect = 5.0
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 544 PSPPKSPTRDTPHAAHRANSASRAPP--SGRASGQ 576
PSPP S + H +RA SR+PP +ASG+
Sbjct: 53 PSPPTSEPARSGHRGNRARGVSRSPPKKKNKASGR 87
>gi|224465238 hypothetical protein LOC283999 [Homo sapiens]
Length = 394
Score = 30.0 bits (66), Expect = 6.5
Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
Query: 528 IRRRMGLIRAVSALKPPSPPKSPTRDTPHAAHRANSASRAPPSGRASGQAG 578
+ RR G RA +PP P+ P P + +PP+GR G AG
Sbjct: 142 VLRRAGRRRA----RPPPVPRLPAPRAPRRPRGPATPDPSPPAGRPHGPAG 188
>gi|4503257 death-domain associated protein isoform a [Homo sapiens]
Length = 740
Score = 30.0 bits (66), Expect = 6.5
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 520 CTVNLDHSIRRRMGLIRAVSALKPPSPPKSPTRDTPHAAHRANSASRAP 568
CTV HS ++++ L A + PS PT + + N+AS++P
Sbjct: 131 CTVLKAHSAKKKLNLAPAATTSNEPSGNNPPTHLSLDPTNAENTASQSP 179
>gi|215422388 death-domain associated protein isoform a [Homo
sapiens]
Length = 740
Score = 30.0 bits (66), Expect = 6.5
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 520 CTVNLDHSIRRRMGLIRAVSALKPPSPPKSPTRDTPHAAHRANSASRAP 568
CTV HS ++++ L A + PS PT + + N+AS++P
Sbjct: 131 CTVLKAHSAKKKLNLAPAATTSNEPSGNNPPTHLSLDPTNAENTASQSP 179
>gi|215422366 death-domain associated protein isoform b [Homo
sapiens]
Length = 752
Score = 30.0 bits (66), Expect = 6.5
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 520 CTVNLDHSIRRRMGLIRAVSALKPPSPPKSPTRDTPHAAHRANSASRAP 568
CTV HS ++++ L A + PS PT + + N+AS++P
Sbjct: 143 CTVLKAHSAKKKLNLAPAATTSNEPSGNNPPTHLSLDPTNAENTASQSP 191
>gi|169213235 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 30.0 bits (66), Expect = 6.5
Identities = 25/79 (31%), Positives = 31/79 (39%), Gaps = 14/79 (17%)
Query: 543 PPSPPKSPTR-DTPHAAHRANSASRAPPSGRASGQAGEGHHTGDL---------AHRG-- 590
PP PP P+R + P A R + P GR + +G G L A RG
Sbjct: 73 PPPPPGGPSRSERPRAGLRPGAFVSPGPLGRRASCSGRAGSAGRLRCSAAALSAAQRGGP 132
Query: 591 --KLWPVACALFRPGQSSP 607
P A F PG +SP
Sbjct: 133 ARAQVPPALRTFSPGPASP 151
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.138 0.430
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,964,006
Number of Sequences: 37866
Number of extensions: 1198022
Number of successful extensions: 4580
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 4534
Number of HSP's gapped (non-prelim): 90
length of query: 610
length of database: 18,247,518
effective HSP length: 108
effective length of query: 502
effective length of database: 14,157,990
effective search space: 7107310980
effective search space used: 7107310980
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.