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Search of human proteins with 11560150
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|11560150 activating signal cointegrator 1 complex subunit 3
isoform b [Homo sapiens]
(111 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|11560150 activating signal cointegrator 1 complex subunit 3 i... 221 1e-58
gi|76880486 activating signal cointegrator 1 complex subunit 3 i... 158 1e-39
gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [H... 33 0.064
gi|209862789 microtubule associated monoxygenase, calponin and L... 32 0.11
gi|118600961 akt substrate AS250 [Homo sapiens] 31 0.19
gi|92859701 myosin VI [Homo sapiens] 31 0.24
gi|237858799 adenylate kinase domain containing 1 isoform 1 [Hom... 30 0.32
gi|75677376 coiled-coil domain containing 62 isoform b [Homo sap... 30 0.42
gi|30348972 coiled-coil domain containing 62 isoform a [Homo sap... 30 0.42
gi|56961680 coiled-coil domain containing 147 [Homo sapiens] 30 0.42
gi|223278344 C-type lectin domain family 4, member M isoform 10 ... 30 0.54
gi|223029388 CD209 molecule isoform 4 [Homo sapiens] 29 0.71
gi|223029386 CD209 molecule isoform 3 [Homo sapiens] 29 0.71
gi|223029382 CD209 molecule isoform 6 [Homo sapiens] 29 0.71
gi|10863957 CD209 molecule isoform 1 [Homo sapiens] 29 0.71
gi|164607124 Fanconi anemia, complementation group I isoform 1 [... 29 0.71
gi|223029384 CD209 molecule isoform 7 [Homo sapiens] 29 0.92
gi|223029380 CD209 molecule isoform 5 [Homo sapiens] 29 0.92
gi|223278342 C-type lectin domain family 4, member M isoform 11 ... 29 0.92
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo... 29 0.92
gi|148612829 RUN and TBC1 domain containing 1 isoform 2 [Homo sa... 28 1.2
gi|148612795 RUN and TBC1 domain containing 1 isoform 1 [Homo sa... 28 1.2
gi|122937416 hypothetical protein LOC85452 [Homo sapiens] 28 1.6
gi|239755047 PREDICTED: ankyrin repeat domain 18A [Homo sapiens] 28 1.6
gi|239749578 PREDICTED: ankyrin repeat domain 18A [Homo sapiens] 28 1.6
gi|239743724 PREDICTED: ankyrin repeat domain 18A [Homo sapiens] 28 1.6
gi|82830440 Fanconi anemia, complementation group I isoform 2 [H... 28 1.6
gi|153945715 myosin VC [Homo sapiens] 28 2.1
gi|223029436 hypothetical protein LOC643376 [Homo sapiens] 27 2.7
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens] 27 2.7
>gi|11560150 activating signal cointegrator 1 complex subunit 3
isoform b [Homo sapiens]
Length = 111
Score = 221 bits (562), Expect = 1e-58
Identities = 111/111 (100%), Positives = 111/111 (100%)
Query: 1 MALPRLTGALRSFSNVTKQDNYNEEVADLKIKRSKLHEQVLDLGLTWKKIIKFLNEKLEK 60
MALPRLTGALRSFSNVTKQDNYNEEVADLKIKRSKLHEQVLDLGLTWKKIIKFLNEKLEK
Sbjct: 1 MALPRLTGALRSFSNVTKQDNYNEEVADLKIKRSKLHEQVLDLGLTWKKIIKFLNEKLEK 60
Query: 61 SKMQSINEDLKDILHAAKQIEVNCPFQKRRLDGKEEDEKMSRASDRFRGLR 111
SKMQSINEDLKDILHAAKQIEVNCPFQKRRLDGKEEDEKMSRASDRFRGLR
Sbjct: 61 SKMQSINEDLKDILHAAKQIEVNCPFQKRRLDGKEEDEKMSRASDRFRGLR 111
>gi|76880486 activating signal cointegrator 1 complex subunit 3
isoform a [Homo sapiens]
Length = 2202
Score = 158 bits (399), Expect = 1e-39
Identities = 80/80 (100%), Positives = 80/80 (100%)
Query: 1 MALPRLTGALRSFSNVTKQDNYNEEVADLKIKRSKLHEQVLDLGLTWKKIIKFLNEKLEK 60
MALPRLTGALRSFSNVTKQDNYNEEVADLKIKRSKLHEQVLDLGLTWKKIIKFLNEKLEK
Sbjct: 1 MALPRLTGALRSFSNVTKQDNYNEEVADLKIKRSKLHEQVLDLGLTWKKIIKFLNEKLEK 60
Query: 61 SKMQSINEDLKDILHAAKQI 80
SKMQSINEDLKDILHAAKQI
Sbjct: 61 SKMQSINEDLKDILHAAKQI 80
>gi|98986453 myosin, heavy chain 3, skeletal muscle, embryonic [Homo
sapiens]
Length = 1940
Score = 32.7 bits (73), Expect = 0.064
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 18 KQDNYNEEVADL-----KIKRSK-----LHEQVLDLGLTWKKIIKFLNEKLEKSKMQSIN 67
K N EE++ L K+ R K H+Q LD + + LN+ KSK++
Sbjct: 975 KVKNLTEELSGLDETIAKLTREKKALQEAHQQALDDLQAEEDKVNSLNKT--KSKLEQQV 1032
Query: 68 EDLKDILHAAKQIEVNCPFQKRRLDGKEEDEKMSRAS 104
EDL+ L K++ V+ KR+L+G D K+++ S
Sbjct: 1033 EDLESSLEQEKKLRVDLERNKRKLEG---DLKLAQES 1066
>gi|209862789 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 1 [Homo sapiens]
Length = 2002
Score = 32.0 bits (71), Expect = 0.11
Identities = 13/47 (27%), Positives = 28/47 (59%)
Query: 59 EKSKMQSINEDLKDILHAAKQIEVNCPFQKRRLDGKEEDEKMSRASD 105
E+ ++ N+ L+ ++HAA +E+ + +EE+E+M+ AS+
Sbjct: 1013 EEESSEAGNQRLQQVMHAADPLEIQADVHWTHIREREEEERMAPASE 1059
>gi|118600961 akt substrate AS250 [Homo sapiens]
Length = 1873
Score = 31.2 bits (69), Expect = 0.19
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Query: 24 EEVADLKIKRSKLHEQVLDLGLTWKKIIKFLNEKLE-KSKMQSINEDLKDILHAAKQIEV 82
E LK E++ + ++KI++FL E++ + QSI LK +LH I++
Sbjct: 66 ENSLKLKGNNKSQREELDSILFLFEKILQFLPERIFFRWHYQSIGSTLKKLLHTGNSIKI 125
Query: 83 NC 84
C
Sbjct: 126 RC 127
>gi|92859701 myosin VI [Homo sapiens]
Length = 1285
Score = 30.8 bits (68), Expect = 0.24
Identities = 25/113 (22%), Positives = 52/113 (46%), Gaps = 9/113 (7%)
Query: 4 PRLTGALRSFSNVTKQDNYNEEVADLKIKRSKLHEQVLDLGLTWKKIIKFLNEKL----- 58
PR+ G ++ + + D +NE V+ LK + ++++Q+ +L ++ ++ + +
Sbjct: 835 PRIDGLVKVGTLKKRLDKFNEVVSVLKDGKPEMNKQIKNLEISIDTLMAKIKSTMMTQEQ 894
Query: 59 ---EKSKMQSINEDLKDILHAAKQIEVNCPFQKRRLDGKEEDEKMSRASDRFR 108
E + +E+L L KQ E + RR+ + E E+ R D R
Sbjct: 895 IQKEYDALVKSSEELLSALQKKKQQEEEAE-RLRRIQEEMEKERKRREEDEKR 946
>gi|237858799 adenylate kinase domain containing 1 isoform 1 [Homo
sapiens]
Length = 1911
Score = 30.4 bits (67), Expect = 0.32
Identities = 14/55 (25%), Positives = 33/55 (60%), Gaps = 6/55 (10%)
Query: 55 NEKLEKSKMQSINEDLKDILHAAKQIEVNCPFQKRRLDGKEEDEKMSRASDRFRG 109
+E++ + +++ N+D+++IL E P + + G+E++E+ + A +R RG
Sbjct: 1217 DEEISEEELEEDNDDIENIL------EDEFPKDEEEMSGEEDEEQETDAIERLRG 1265
>gi|75677376 coiled-coil domain containing 62 isoform b [Homo
sapiens]
Length = 684
Score = 30.0 bits (66), Expect = 0.42
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 17 TKQDNYNEEVADLKIKRSKLHEQVLDLGLTWKKIIKFLNEKLEKSKMQSINEDLKDILHA 76
T+ + EE+ LK ++S LH+++L K+ + LN + KSK + N +L ++
Sbjct: 231 TENNEQREEIIRLKQEKSCLHDELLFTVEREKRKDELLN--IAKSKQERTNSELHNLRQI 288
Query: 77 AKQIEVNCPFQKRRLDGKEE-----DEKM--SRASDRFRGL 110
+ + + F ++ +E D KM S+A D R +
Sbjct: 289 YVKQQSDLQFLNFNVENSQELIQMYDSKMEESKALDSSRDM 329
>gi|30348972 coiled-coil domain containing 62 isoform a [Homo
sapiens]
Length = 682
Score = 30.0 bits (66), Expect = 0.42
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 17 TKQDNYNEEVADLKIKRSKLHEQVLDLGLTWKKIIKFLNEKLEKSKMQSINEDLKDILHA 76
T+ + EE+ LK ++S LH+++L K+ + LN + KSK + N +L ++
Sbjct: 231 TENNEQREEIIRLKQEKSCLHDELLFTVEREKRKDELLN--IAKSKQERTNSELHNLRQI 288
Query: 77 AKQIEVNCPFQKRRLDGKEE-----DEKM--SRASDRFRGL 110
+ + + F ++ +E D KM S+A D R +
Sbjct: 289 YVKQQSDLQFLNFNVENSQELIQMYDSKMEESKALDSSRDM 329
>gi|56961680 coiled-coil domain containing 147 [Homo sapiens]
Length = 872
Score = 30.0 bits (66), Expect = 0.42
Identities = 24/85 (28%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 19 QDNYNEEVADLKIKRSKLHEQVLDLGLTWKKIIKFLNEKL-----EKSKMQSINEDLKDI 73
Q+N ++ +LK K ++H+ LD+G KI + +++KL +K++++ E LK+
Sbjct: 300 QEN-QQKALELKAKEEEVHQMRLDIG-KLNKIREQIHKKLHHTEDQKAEVEQHKETLKNQ 357
Query: 74 LHAAKQIEVNCPFQKRRLDGKEEDE 98
+ ++ EV ++ LD K DE
Sbjct: 358 IVGLER-EVEASKKQAELDRKAMDE 381
>gi|223278344 C-type lectin domain family 4, member M isoform 10
[Homo sapiens]
Length = 232
Score = 29.6 bits (65), Expect = 0.54
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 10/89 (11%)
Query: 3 LPRLTGALRSFSNVTKQDNYNEEVADLKI------KRSKLHEQVLDLGLTWKKIIKFLNE 56
L +L A+ S +K +E+ LK ++SKL E +L ++ + E
Sbjct: 93 LTQLKAAVGELSEKSKLQEIYQELTQLKAAVGELPEKSKLQEIYQEL----TRLKAAVGE 148
Query: 57 KLEKSKMQSINEDLKDILHAAKQIEVNCP 85
EKSK+Q I ++L + A +++ +CP
Sbjct: 149 LPEKSKLQEIYQELTRLKAAVERLCRHCP 177
>gi|223029388 CD209 molecule isoform 4 [Homo sapiens]
Length = 398
Score = 29.3 bits (64), Expect = 0.71
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 3 LPRLTGALRSFSNVTKQDNYNEEVADLKIKRSKLHEQVLDLGLTWK--KIIKFLNEKLEK 60
L RL A+ +KQ +E+ LK +L E+ + + ++ + E EK
Sbjct: 173 LTRLKAAVGELPEKSKQQEIYQELTRLKAAVGELPEKSKQQEIYQELTRLKAAVGELPEK 232
Query: 61 SKMQSINEDLKDILHAAKQIEVNCPFQ 87
SK Q I ++L + A +++ CP++
Sbjct: 233 SKQQEIYQELTQLKAAVERLCHPCPWE 259
Score = 26.9 bits (58), Expect = 3.5
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 3 LPRLTGALRSFSNVTKQDNYNEEVADLKIKRSKLHE----QVLDLGLTWKKIIKFLNEKL 58
L +L A+ +K +E+ LK +L E Q + LTW K + E
Sbjct: 104 LTQLKAAVGELPEKSKLQEIYQELTRLKAAVGELPEKSKLQEIYQELTWLKAA--VGELP 161
Query: 59 EKSKMQSINEDLKDILHAAKQI 80
EKSKMQ I ++L + A ++
Sbjct: 162 EKSKMQEIYQELTRLKAAVGEL 183
>gi|223029386 CD209 molecule isoform 3 [Homo sapiens]
Length = 380
Score = 29.3 bits (64), Expect = 0.71
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 3 LPRLTGALRSFSNVTKQDNYNEEVADLKIKRSKLHEQVLDLGLTWK--KIIKFLNEKLEK 60
L RL A+ +KQ +E+ LK +L E+ + + ++ + E EK
Sbjct: 149 LTRLKAAVGELPEKSKQQEIYQELTRLKAAVGELPEKSKQQEIYQELTRLKAAVGELPEK 208
Query: 61 SKMQSINEDLKDILHAAKQIEVNCPFQ 87
SK Q I ++L + A +++ CP++
Sbjct: 209 SKQQEIYQELTQLKAAVERLCHPCPWE 235
Score = 26.9 bits (58), Expect = 3.5
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 3 LPRLTGALRSFSNVTKQDNYNEEVADLKIKRSKLHE----QVLDLGLTWKKIIKFLNEKL 58
L +L A+ +K +E+ LK +L E Q + LTW K + E
Sbjct: 80 LTQLKAAVGELPEKSKLQEIYQELTRLKAAVGELPEKSKLQEIYQELTWLKAA--VGELP 137
Query: 59 EKSKMQSINEDLKDILHAAKQI 80
EKSKMQ I ++L + A ++
Sbjct: 138 EKSKMQEIYQELTRLKAAVGEL 159
>gi|223029382 CD209 molecule isoform 6 [Homo sapiens]
Length = 360
Score = 29.3 bits (64), Expect = 0.71
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 3 LPRLTGALRSFSNVTKQDNYNEEVADLKIKRSKLHEQVLDLGLTWK--KIIKFLNEKLEK 60
L RL A+ +KQ +E+ LK +L E+ + + ++ + E EK
Sbjct: 129 LTRLKAAVGELPEKSKQQEIYQELTRLKAAVGELPEKSKQQEIYQELTRLKAAVGELPEK 188
Query: 61 SKMQSINEDLKDILHAAKQIEVNCPFQ 87
SK Q I ++L + A +++ CP++
Sbjct: 189 SKQQEIYQELTQLKAAVERLCHPCPWE 215
Score = 26.9 bits (58), Expect = 3.5
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 3 LPRLTGALRSFSNVTKQDNYNEEVADLKIKRSKLHE----QVLDLGLTWKKIIKFLNEKL 58
L +L A+ +K +E+ LK +L E Q + LTW K + E
Sbjct: 60 LTQLKAAVGELPEKSKLQEIYQELTRLKAAVGELPEKSKLQEIYQELTWLKAA--VGELP 117
Query: 59 EKSKMQSINEDLKDILHAAKQI 80
EKSKMQ I ++L + A ++
Sbjct: 118 EKSKMQEIYQELTRLKAAVGEL 139
>gi|10863957 CD209 molecule isoform 1 [Homo sapiens]
Length = 404
Score = 29.3 bits (64), Expect = 0.71
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 2/87 (2%)
Query: 3 LPRLTGALRSFSNVTKQDNYNEEVADLKIKRSKLHEQVLDLGLTWK--KIIKFLNEKLEK 60
L RL A+ +KQ +E+ LK +L E+ + + ++ + E EK
Sbjct: 173 LTRLKAAVGELPEKSKQQEIYQELTRLKAAVGELPEKSKQQEIYQELTRLKAAVGELPEK 232
Query: 61 SKMQSINEDLKDILHAAKQIEVNCPFQ 87
SK Q I ++L + A +++ CP++
Sbjct: 233 SKQQEIYQELTQLKAAVERLCHPCPWE 259
Score = 26.9 bits (58), Expect = 3.5
Identities = 24/82 (29%), Positives = 37/82 (45%), Gaps = 6/82 (7%)
Query: 3 LPRLTGALRSFSNVTKQDNYNEEVADLKIKRSKLHE----QVLDLGLTWKKIIKFLNEKL 58
L +L A+ +K +E+ LK +L E Q + LTW K + E
Sbjct: 104 LTQLKAAVGELPEKSKLQEIYQELTRLKAAVGELPEKSKLQEIYQELTWLKAA--VGELP 161
Query: 59 EKSKMQSINEDLKDILHAAKQI 80
EKSKMQ I ++L + A ++
Sbjct: 162 EKSKMQEIYQELTRLKAAVGEL 183
>gi|164607124 Fanconi anemia, complementation group I isoform 1
[Homo sapiens]
Length = 1328
Score = 29.3 bits (64), Expect = 0.71
Identities = 20/86 (23%), Positives = 37/86 (43%), Gaps = 3/86 (3%)
Query: 22 YNEEVADLKIKRSKLHEQVLDLGLTWKKIIKFLNEKLEKSKMQSINEDLKDILHAAKQIE 81
YN ++ R E +L L + +KK+ LNEK K+K + N+ +L
Sbjct: 756 YNFSISSFSKNR---FEDILSLFMCYKKLSDILNEKAGKAKTKMANKTSDSLLSMKFVSS 812
Query: 82 VNCPFQKRRLDGKEEDEKMSRASDRF 107
+ + + +E + R+S+ F
Sbjct: 813 LLTALFRDSIQSHQESLSVLRSSNEF 838
>gi|223029384 CD209 molecule isoform 7 [Homo sapiens]
Length = 312
Score = 28.9 bits (63), Expect = 0.92
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 3 LPRLTGALRSFSNVTKQDNYNEEVADLKI------KRSKLHEQVLDLGLTWKKIIKFLNE 56
L +L A+ S +K +E+ LK ++SKL E +L ++ + E
Sbjct: 81 LTQLKAAVGELSEKSKLQEIYQELTQLKAAVGELPEKSKLQEIYQEL----TRLKAAVGE 136
Query: 57 KLEKSKMQSINEDLKDILHAAKQIEVNCPFQ 87
EKSK+Q I ++L + A +++ CP++
Sbjct: 137 LPEKSKLQEIYQELTWLKAAVERLCHPCPWE 167
>gi|223029380 CD209 molecule isoform 5 [Homo sapiens]
Length = 268
Score = 28.9 bits (63), Expect = 0.92
Identities = 24/91 (26%), Positives = 44/91 (48%), Gaps = 10/91 (10%)
Query: 3 LPRLTGALRSFSNVTKQDNYNEEVADLKI------KRSKLHEQVLDLGLTWKKIIKFLNE 56
L +L A+ S +K +E+ LK ++SKL E +L ++ + E
Sbjct: 37 LTQLKAAVGELSEKSKLQEIYQELTQLKAAVGELPEKSKLQEIYQEL----TRLKAAVGE 92
Query: 57 KLEKSKMQSINEDLKDILHAAKQIEVNCPFQ 87
EKSK+Q I ++L + A +++ CP++
Sbjct: 93 LPEKSKLQEIYQELTWLKAAVERLCHPCPWE 123
>gi|223278342 C-type lectin domain family 4, member M isoform 11
[Homo sapiens]
Length = 332
Score = 28.9 bits (63), Expect = 0.92
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 10/89 (11%)
Query: 3 LPRLTGALRSFSNVTKQDNYNEEVADLKI------KRSKLHEQVLDLGLTWKKIIKFLNE 56
L RL A+ +K +E+ LK ++SKL E +L ++ + E
Sbjct: 118 LTRLKAAVGELPEKSKLQEIYQELTRLKAAVGELPEKSKLQEIYQEL----TELKAAVGE 173
Query: 57 KLEKSKMQSINEDLKDILHAAKQIEVNCP 85
EKSK+Q I ++L + A +++ +CP
Sbjct: 174 LPEKSKLQEIYQELTQLKAAVERLCRHCP 202
>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
sapiens]
Length = 1938
Score = 28.9 bits (63), Expect = 0.92
Identities = 25/95 (26%), Positives = 46/95 (48%), Gaps = 11/95 (11%)
Query: 18 KQDNYNEEVADLKIKRSKLHEQVLDLGLTWKKIIKFLNEKLEK--------SKMQSINED 69
K N +EE+ L+ SKL ++ L ++ + L + +K +K++ +D
Sbjct: 978 KVKNLSEEMTALEENISKLTKEKKSLQEAHQQTLDDLQVEEDKVNGLIKINAKLEQQTDD 1037
Query: 70 LKDILHAAKQIEVNCPFQKRRLDGKEEDEKMSRAS 104
L+ L K++ + KR+L+G D KMS+ S
Sbjct: 1038 LEGSLEQEKKLRADLERAKRKLEG---DLKMSQES 1069
>gi|148612829 RUN and TBC1 domain containing 1 isoform 2 [Homo
sapiens]
Length = 1006
Score = 28.5 bits (62), Expect = 1.2
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 38 EQVLDLGLTWKKIIKFLNEKLEKSKMQSINEDLKDILHAAKQIEVN 83
E + D + + IIKF NE+ E Q I +D++H + + N
Sbjct: 960 EIIRDNNMDFTDIIKFFNERAEHHDAQEILRIARDLVHKVQMLIEN 1005
>gi|148612795 RUN and TBC1 domain containing 1 isoform 1 [Homo
sapiens]
Length = 1051
Score = 28.5 bits (62), Expect = 1.2
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 38 EQVLDLGLTWKKIIKFLNEKLEKSKMQSINEDLKDILHAAKQIEVN 83
E + D + + IIKF NE+ E Q I +D++H + + N
Sbjct: 1005 EIIRDNNMDFTDIIKFFNERAEHHDAQEILRIARDLVHKVQMLIEN 1050
>gi|122937416 hypothetical protein LOC85452 [Homo sapiens]
Length = 762
Score = 28.1 bits (61), Expect = 1.6
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 32 KRSKLHEQVLDLGLTWKKIIKFLNE--KLEKSKMQSINEDLKDILH 75
K LH Q D+G +KK I +N + K+ + E L+D +H
Sbjct: 518 KPELLHFQDFDIGKVYKKKITLVNTTYTINYCKLVGVEEHLRDFIH 563
>gi|239755047 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
Length = 1415
Score = 28.1 bits (61), Expect = 1.6
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 48 KKIIKFLNEKLEKSKMQSINEDLKDILHAAKQIEVNCPFQKR-RLDGKEEDEKMSRASDR 106
KK I L E+L K S+ ++ K I E+N F+K RL+ K + ++R S +
Sbjct: 438 KKDIAMLKEELYAIKNDSLRKEKKYIQEIKSITEINANFEKSVRLNEKMITKTVARYSQQ 497
Query: 107 FRGLR 111
L+
Sbjct: 498 LNDLK 502
>gi|239749578 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
Length = 1002
Score = 28.1 bits (61), Expect = 1.6
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 48 KKIIKFLNEKLEKSKMQSINEDLKDILHAAKQIEVNCPFQKR-RLDGKEEDEKMSRASDR 106
KK I L E+L K S+ ++ K I E+N F+K RL+ K + ++R S +
Sbjct: 331 KKDIAMLKEELYAIKNDSLRKEKKYIQEIKSITEINANFEKSVRLNEKMITKTVARYSQQ 390
Query: 107 FRGLR 111
L+
Sbjct: 391 LNDLK 395
>gi|239743724 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
Length = 1415
Score = 28.1 bits (61), Expect = 1.6
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 48 KKIIKFLNEKLEKSKMQSINEDLKDILHAAKQIEVNCPFQKR-RLDGKEEDEKMSRASDR 106
KK I L E+L K S+ ++ K I E+N F+K RL+ K + ++R S +
Sbjct: 438 KKDIAMLKEELYAIKNDSLRKEKKYIQEIKSITEINANFEKSVRLNEKMITKTVARYSQQ 497
Query: 107 FRGLR 111
L+
Sbjct: 498 LNDLK 502
>gi|82830440 Fanconi anemia, complementation group I isoform 2 [Homo
sapiens]
Length = 1268
Score = 28.1 bits (61), Expect = 1.6
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 22 YNEEVADLKIKRSKLHEQVLDLGLTWKKIIKFLNEKLEKSKMQSINEDLKDIL 74
YN ++ R E +L L + +KK+ LNEK K+K + N+ +L
Sbjct: 756 YNFSISSFSKNR---FEDILSLFMCYKKLSDILNEKAGKAKTKMANKTSDSLL 805
>gi|153945715 myosin VC [Homo sapiens]
Length = 1742
Score = 27.7 bits (60), Expect = 2.1
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 12/81 (14%)
Query: 16 VTKQDNYNEEVADLKIKRSKLHEQVLDLGLTWKKIIKFLNEKLEKSKMQSINEDLKDILH 75
VT+ + N + D K + S+L +Q DL + LNE+ E KM+ E+L + LH
Sbjct: 1201 VTRLTSENMMIPDFKQQISELEKQKQDLEIR-------LNEQAE--KMKGKLEELSNQLH 1251
Query: 76 AAKQIEVNCPFQKRRLDGKEE 96
+++ E Q++ L+ + E
Sbjct: 1252 RSQEEEGT---QRKALEAQNE 1269
>gi|223029436 hypothetical protein LOC643376 [Homo sapiens]
Length = 712
Score = 27.3 bits (59), Expect = 2.7
Identities = 15/44 (34%), Positives = 27/44 (61%)
Query: 40 VLDLGLTWKKIIKFLNEKLEKSKMQSINEDLKDILHAAKQIEVN 83
VL+LG ++ L + L S+M+ E+ +D+L AA+Q+ V+
Sbjct: 75 VLELGGLKISTLRKLVDFLYTSEMEVSQEEAQDVLSAARQLRVS 118
>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
Length = 3907
Score = 27.3 bits (59), Expect = 2.7
Identities = 22/92 (23%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 19 QDNYNEEVADLKIKRSKLHEQVLDLGLTWKKIIKFLNEKLEKSKMQSINEDLKDILHAAK 78
++ EE+ DLK ++ L L L ++ + LNE +K + Q + D + +
Sbjct: 3235 EERDKEELEDLKFSLESQKQRNLQLNLLLEQQKQLLNESQQKIESQRMLYDAQLSEEQGR 3294
Query: 79 QIEVNCPFQKRRLDGKEEDEKMSRASDRFRGL 110
+E+ + ++ +E MS DR R L
Sbjct: 3295 NLELQVLLESEKVRIRE----MSSTLDREREL 3322
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.132 0.364
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,610,752
Number of Sequences: 37866
Number of extensions: 131139
Number of successful extensions: 693
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 642
Number of HSP's gapped (non-prelim): 99
length of query: 111
length of database: 18,247,518
effective HSP length: 81
effective length of query: 30
effective length of database: 15,180,372
effective search space: 455411160
effective search space used: 455411160
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.