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Search of human proteins with 23397566
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|23397566 transmembrane protein 151A [Homo sapiens]
(468 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|23397566 transmembrane protein 151A [Homo sapiens] 974 0.0
gi|212274327 transmembrane protein 151B [Homo sapiens] 480 e-135
gi|17402888 neuronal pentraxin receptor [Homo sapiens] 33 0.55
gi|163965434 dapper, antagonist of beta-catenin, homolog 2 [Homo... 33 0.55
gi|103471997 DNA-directed RNA polymerase I A [Homo sapiens] 32 0.95
gi|193082982 zinc finger protein 837 isoform 1 [Homo sapiens] 32 0.95
gi|193082980 zinc finger protein 837 isoform 2 [Homo sapiens] 32 0.95
gi|148806908 fibronectin type III domain containing 1 [Homo sapi... 32 0.95
gi|150170729 microtubule associated serine/threonine kinase 3 [H... 32 0.95
gi|239757167 PREDICTED: hypothetical protein XP_002345192 [Homo ... 32 1.2
gi|239751677 PREDICTED: hypothetical protein [Homo sapiens] 32 1.2
gi|239746181 PREDICTED: hypothetical protein XP_002343670 [Homo ... 32 1.2
gi|6680081 putative GR6 protein [Homo sapiens] 32 1.2
gi|239750217 PREDICTED: hypothetical protein [Homo sapiens] 32 1.6
gi|239744524 PREDICTED: hypothetical protein XP_002343168 [Homo ... 32 1.6
gi|189491742 ataxin 7 isoform b [Homo sapiens] 32 1.6
gi|4506797 ataxin 7 isoform a [Homo sapiens] 32 1.6
gi|122114658 hypothetical protein LOC23053 [Homo sapiens] 32 1.6
gi|239757101 PREDICTED: hypothetical protein [Homo sapiens] 31 2.1
gi|239745342 PREDICTED: hypothetical protein XP_002343430 [Homo ... 31 2.1
gi|40807477 retinoic acid induced 1 [Homo sapiens] 31 2.1
gi|224926824 SH2B adaptor protein 1 isoform 2 [Homo sapiens] 30 3.6
gi|13376611 zinc finger protein 703 [Homo sapiens] 30 3.6
gi|224926830 SH2B adaptor protein 1 isoform 3 [Homo sapiens] 30 3.6
gi|224926828 SH2B adaptor protein 1 isoform 2 [Homo sapiens] 30 3.6
gi|224926826 SH2B adaptor protein 1 isoform 1 [Homo sapiens] 30 3.6
gi|224926822 SH2B adaptor protein 1 isoform 2 [Homo sapiens] 30 3.6
gi|115334675 hypothetical protein LOC90268 [Homo sapiens] 30 3.6
gi|4503925 GATA binding protein 1 [Homo sapiens] 30 4.7
gi|40254434 phosphodiesterase 3B [Homo sapiens] 30 6.1
>gi|23397566 transmembrane protein 151A [Homo sapiens]
Length = 468
Score = 974 bits (2518), Expect = 0.0
Identities = 468/468 (100%), Positives = 468/468 (100%)
Query: 1 MPEDGAGDGGEVPALIPDGEPLREEQRPLKQSLGSSLCRESHWKCLLLTLLIHACGAVVA 60
MPEDGAGDGGEVPALIPDGEPLREEQRPLKQSLGSSLCRESHWKCLLLTLLIHACGAVVA
Sbjct: 1 MPEDGAGDGGEVPALIPDGEPLREEQRPLKQSLGSSLCRESHWKCLLLTLLIHACGAVVA 60
Query: 61 WCRLATVPRLVLGPEAALARGAGGPPPTYPASPCSDGYLYIPLAFVSLLYLLYLAECWHC 120
WCRLATVPRLVLGPEAALARGAGGPPPTYPASPCSDGYLYIPLAFVSLLYLLYLAECWHC
Sbjct: 61 WCRLATVPRLVLGPEAALARGAGGPPPTYPASPCSDGYLYIPLAFVSLLYLLYLAECWHC 120
Query: 121 HVRSCQAPRTDAHTVLALIRRLQQAPPCVWWKATSYHYVRRTRQITRYRNGDAYTTTQVY 180
HVRSCQAPRTDAHTVLALIRRLQQAPPCVWWKATSYHYVRRTRQITRYRNGDAYTTTQVY
Sbjct: 121 HVRSCQAPRTDAHTVLALIRRLQQAPPCVWWKATSYHYVRRTRQITRYRNGDAYTTTQVY 180
Query: 181 HERADSRTARGEFDYSAHGVRDVSKELVGLAEHAATRLRFTKCFSFGSAEAEASYLTQRA 240
HERADSRTARGEFDYSAHGVRDVSKELVGLAEHAATRLRFTKCFSFGSAEAEASYLTQRA
Sbjct: 181 HERADSRTARGEFDYSAHGVRDVSKELVGLAEHAATRLRFTKCFSFGSAEAEASYLTQRA 240
Query: 241 RFFSANEGLDDYLEAREGMHLKDVDFRESLMVFADPRSPPWYARAWVFWLVSAATLSWPL 300
RFFSANEGLDDYLEAREGMHLKDVDFRESLMVFADPRSPPWYARAWVFWLVSAATLSWPL
Sbjct: 241 RFFSANEGLDDYLEAREGMHLKDVDFRESLMVFADPRSPPWYARAWVFWLVSAATLSWPL 300
Query: 301 RVVAAYGTAHVHYQVEKLFGASSPPPGAVPSGPPLSRVATVDFTELEWHICSNRQLVPSY 360
RVVAAYGTAHVHYQVEKLFGASSPPPGAVPSGPPLSRVATVDFTELEWHICSNRQLVPSY
Sbjct: 301 RVVAAYGTAHVHYQVEKLFGASSPPPGAVPSGPPLSRVATVDFTELEWHICSNRQLVPSY 360
Query: 361 SEAVVMGAGSGAYLRGCQRCRRSVSSNSLPPARPSGPRLPFSRSRLSLGAGGRATPGVFR 420
SEAVVMGAGSGAYLRGCQRCRRSVSSNSLPPARPSGPRLPFSRSRLSLGAGGRATPGVFR
Sbjct: 361 SEAVVMGAGSGAYLRGCQRCRRSVSSNSLPPARPSGPRLPFSRSRLSLGAGGRATPGVFR 420
Query: 421 SLSGGPLGRRGEDTEPLESPPCYEDALYFPVLIVHGDSGCQGDGQGAL 468
SLSGGPLGRRGEDTEPLESPPCYEDALYFPVLIVHGDSGCQGDGQGAL
Sbjct: 421 SLSGGPLGRRGEDTEPLESPPCYEDALYFPVLIVHGDSGCQGDGQGAL 468
>gi|212274327 transmembrane protein 151B [Homo sapiens]
Length = 566
Score = 480 bits (1235), Expect = e-135
Identities = 277/553 (50%), Positives = 320/553 (57%), Gaps = 112/553 (20%)
Query: 5 GAGDGGEVP-----------ALIPDGEPLREEQRPLKQSLGSSLCRESHWKCLLLTLLIH 53
G G GG P A D P REEQRP++ S SLCRESHWKCLLL+LL++
Sbjct: 14 GGGGGGGGPGVSEELTAAAAAAAADEGPAREEQRPIQPSFTKSLCRESHWKCLLLSLLMY 73
Query: 54 ACGAVVAWCRLATVPRLVLGPEAALARGAGGPPPTYPASPCSDGYLYIPLAFVSLLYLLY 113
C VAWC + TV RL + G Y SPCS+GY+YIPLAF+ +LY +Y
Sbjct: 74 GCLGAVAWCHVTTVTRLTF------SSAYQGNSLMYHDSPCSNGYVYIPLAFLLMLYAVY 127
Query: 114 LAECWHCHVRSCQAPRTDAHTVLALIRRLQQAPPCVWWKATSYHYVRRTRQITRYRNGDA 173
L ECWHC R R D +V + R+QQA PC+WWKA SYHYVRRTRQ+TRYRNGDA
Sbjct: 128 LVECWHCQARHELQHRVDVSSVRERVGRMQQATPCIWWKAISYHYVRRTRQVTRYRNGDA 187
Query: 174 YTTTQVYHERADSRTARGEFDYSAHGVRDVSKELVGLAEHAATRLRFTKCFSFGSAEAEA 233
YTTTQVYHER ++ A EFDY+ GVRDVSK LVGL ATRLRFTKCFSF S EAE
Sbjct: 188 YTTTQVYHERVNTHVAEAEFDYARCGVRDVSKTLVGLEGAPATRLRFTKCFSFASVEAEN 247
Query: 234 SYLTQRARFFSANEGLDDYLEAREGMHLKDVDFRESLMVFADPRSPPWYARAWVFWLVSA 293
+YL QRARFF+ NEGLDDY+EAREGMHLK+VDFRE ++ F DP PPWYA + FW +
Sbjct: 248 AYLCQRARFFAENEGLDDYMEAREGMHLKNVDFREFMVAFPDPARPPWYACSSAFWAAAL 307
Query: 294 ATLSWPLRVVAAYGTAHVHYQVEKLFG------ASSPPPGAVPSG---PPLS----RVAT 340
TLSWPLRV+A Y TA+ HY VEKLFG ASS G PS PPL+ RV T
Sbjct: 308 LTLSWPLRVLAEYRTAYAHYHVEKLFGLEGPGSASSAGGGLSPSDELLPPLTHRLPRVNT 367
Query: 341 VDFTELEWHICSNRQLVPSYSEAVVM----------GAGSG------------------- 371
VD TELEWHI SN+QLVPSYSEAV+M GAG G
Sbjct: 368 VDSTELEWHIRSNQQLVPSYSEAVLMDLAGLGTRCGGAGGGYAPSCRYGGVGGPGAAGVA 427
Query: 372 AYLRGCQRCRRSVSSNSLPPARPSGPRLPFSRSRLSLGAGGRATPG-------------- 417
Y R C+ C+R+VSS+S+ FSRS LS+ A RA PG
Sbjct: 428 PYRRSCEHCQRAVSSSSI-----------FSRSALSICASPRAGPGPGGGAGCGGSRFSL 476
Query: 418 ----------VFRSLSGG-----------------PLGR-RGEDTEPLESPPCYEDALYF 449
++RS SG +G +D E PP Y DALYF
Sbjct: 477 GRLYGSRRSCLWRSRSGSVNEASCPTEQTRLSSQASMGDDEDDDEEEAGPPPPYHDALYF 536
Query: 450 PVLIVHGDSGCQG 462
PVLIVH GC G
Sbjct: 537 PVLIVHRQEGCLG 549
>gi|17402888 neuronal pentraxin receptor [Homo sapiens]
Length = 500
Score = 33.1 bits (74), Expect = 0.55
Identities = 35/116 (30%), Positives = 45/116 (38%), Gaps = 16/116 (13%)
Query: 363 AVVMGAGSGAYLRGCQRCRRSVSSNSLPPARPSGPRLPFSRSRLSLGAGGRATPGVFRSL 422
AV++ AG A+L G C + S+P A LP S+ +G A+PG RSL
Sbjct: 5 AVLLAAGMLAFL-GAVICIIA----SVPLAASPARALPGGADNASVASGAAASPGPQRSL 59
Query: 423 --------SGGP---LGRRGEDTEPLESPPCYEDALYFPVLIVHGDSGCQGDGQGA 467
S GP G PL P + L P+ QGD GA
Sbjct: 60 SALHGAGGSAGPPALPGAPAASAHPLPPGPLFSRFLCTPLAAACPSGAQQGDAAGA 115
>gi|163965434 dapper, antagonist of beta-catenin, homolog 2 [Homo
sapiens]
Length = 774
Score = 33.1 bits (74), Expect = 0.55
Identities = 26/83 (31%), Positives = 37/83 (44%), Gaps = 18/83 (21%)
Query: 12 VPALIPDGEPLREEQR-------PLKQSLGSSLCRESH--WKCLLLTLLIHACGAVVAWC 62
+P L+P +E R P + SL +S+ R H W+ + + A
Sbjct: 569 MPVLVPLAVAPQESHRTSAQALFPFEASLLTSVARRKHRRWQSTV---------EISARA 619
Query: 63 RLATVPRLVLGPEAALARGAGGP 85
RLA+ P LGP +AR AGGP
Sbjct: 620 RLASCPESNLGPPRPVARRAGGP 642
>gi|103471997 DNA-directed RNA polymerase I A [Homo sapiens]
Length = 1720
Score = 32.3 bits (72), Expect = 0.95
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 3/45 (6%)
Query: 99 LYIPLAFVSLLYLLYLAECWHCHVRSCQAPRTDAHTVLALIRRLQ 143
+Y PL F LYLL C +CH+ +C PR H +L +R L+
Sbjct: 87 VYNPLLF-DKLYLLLRGSCLNCHMLTC--PRAVIHLLLCQLRVLE 128
>gi|193082982 zinc finger protein 837 isoform 1 [Homo sapiens]
Length = 531
Score = 32.3 bits (72), Expect = 0.95
Identities = 29/103 (28%), Positives = 35/103 (33%), Gaps = 10/103 (9%)
Query: 362 EAVVMGAGSG----AYLRGCQRCRRSVSSNSLPPARPSGPRLPFSRSRLSLGAGGRATP- 416
EA AG G A +G R P P + L AGGR TP
Sbjct: 2 EAPAQKAGQGGLPKADAQGASGAREKRPEEPRPLEEDRAGSRPTQKGDLRGAAGGRTTPP 61
Query: 417 -----GVFRSLSGGPLGRRGEDTEPLESPPCYEDALYFPVLIV 454
G +S GP R T PL PC + P L++
Sbjct: 62 GGGSRGCSLGVSPGPGTRHSAGTRPLVREPCGPTSSQNPELVI 104
>gi|193082980 zinc finger protein 837 isoform 2 [Homo sapiens]
Length = 531
Score = 32.3 bits (72), Expect = 0.95
Identities = 29/103 (28%), Positives = 35/103 (33%), Gaps = 10/103 (9%)
Query: 362 EAVVMGAGSG----AYLRGCQRCRRSVSSNSLPPARPSGPRLPFSRSRLSLGAGGRATP- 416
EA AG G A +G R P P + L AGGR TP
Sbjct: 2 EAPAQKAGQGGLPKADAQGASGAREKRPEEPRPLEEDRAGSRPTQKGDLRGAAGGRTTPP 61
Query: 417 -----GVFRSLSGGPLGRRGEDTEPLESPPCYEDALYFPVLIV 454
G +S GP R T PL PC + P L++
Sbjct: 62 GGGSRGCSLGVSPGPGTRHSAGTRPLVREPCGPTSSQNPELVI 104
>gi|148806908 fibronectin type III domain containing 1 [Homo sapiens]
Length = 1894
Score = 32.3 bits (72), Expect = 0.95
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 12/83 (14%)
Query: 367 GAGSGAYLRGCQRCRRSVSSNSLPPARPSGPRLPFSRSRLSLGAGGRATPGVFRSLSGGP 426
GAG+G RS ++ PARPS P P SR+R+ RA PG S P
Sbjct: 1118 GAGAGGD-------HRSQRGHAASPARPSRPGGPQSRARVP----SRAAPGKSEPPSKRP 1166
Query: 427 LGRRGEDTEPLESPPCYEDALYF 449
L + + + E EDA +F
Sbjct: 1167 LSSKSQQSVSAEDDE-EEDAGFF 1188
>gi|150170729 microtubule associated serine/threonine kinase 3 [Homo
sapiens]
Length = 1309
Score = 32.3 bits (72), Expect = 0.95
Identities = 42/147 (28%), Positives = 61/147 (41%), Gaps = 15/147 (10%)
Query: 318 LFGASSPPPGAVPSGPPLSRVATVDFTELEWHICSNRQLVPSYSEAVVMGAGSGAYLRGC 377
+ G PPP A P P S + + D L + + +S + AG G L G
Sbjct: 811 ILGEPDPPPAATPVMPKPSSL-SADTAALSHARLRSNSIGARHSTPRPLDAGRGRRLGGP 869
Query: 378 Q--RCRRSVSSNSLPPARPSGPRLPFSRSRLSL--------GAGG-RATPGVFRSLSGGP 426
+ +S +S+S SG R+P S S +L G+GG +P RSLS P
Sbjct: 870 RDPAPEKSRASSSGGSGGGSGGRVPKSASVSALSLIITADDGSGGPLMSPLSPRSLSSNP 929
Query: 427 LGRRGEDTEPLESPPCYEDALYFPVLI 453
R D+ P P +L P++I
Sbjct: 930 SSR---DSSPSRDPSPVCGSLRPPIVI 953
>gi|239757167 PREDICTED: hypothetical protein XP_002345192 [Homo
sapiens]
Length = 191
Score = 32.0 bits (71), Expect = 1.2
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 13/73 (17%)
Query: 22 LREEQRPLKQSLGS-SLCRESHWKCLLLTLLIHACGAVVAWCRLATVPRLVLGP---EAA 77
L +E+ L G+ S C+ + W L G V+ ++TV LGP +AA
Sbjct: 67 LFQEETSLSWKEGARSACQRAAWSHL---------GEVLCLGLVSTVEARGLGPGPEQAA 117
Query: 78 LARGAGGPPPTYP 90
+ARG GG PP P
Sbjct: 118 VARGGGGQPPPRP 130
>gi|239751677 PREDICTED: hypothetical protein [Homo sapiens]
Length = 191
Score = 32.0 bits (71), Expect = 1.2
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 13/73 (17%)
Query: 22 LREEQRPLKQSLGS-SLCRESHWKCLLLTLLIHACGAVVAWCRLATVPRLVLGP---EAA 77
L +E+ L G+ S C+ + W L G V+ ++TV LGP +AA
Sbjct: 67 LFQEETSLSWKEGARSACQRAAWSHL---------GEVLCLGLVSTVEARGLGPGPEQAA 117
Query: 78 LARGAGGPPPTYP 90
+ARG GG PP P
Sbjct: 118 VARGGGGQPPPRP 130
>gi|239746181 PREDICTED: hypothetical protein XP_002343670 [Homo
sapiens]
Length = 191
Score = 32.0 bits (71), Expect = 1.2
Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 13/73 (17%)
Query: 22 LREEQRPLKQSLGS-SLCRESHWKCLLLTLLIHACGAVVAWCRLATVPRLVLGP---EAA 77
L +E+ L G+ S C+ + W L G V+ ++TV LGP +AA
Sbjct: 67 LFQEETSLSWKEGARSACQRAAWSHL---------GEVLCLGLVSTVEARGLGPGPEQAA 117
Query: 78 LARGAGGPPPTYP 90
+ARG GG PP P
Sbjct: 118 VARGGGGQPPPRP 130
>gi|6680081 putative GR6 protein [Homo sapiens]
Length = 149
Score = 32.0 bits (71), Expect = 1.2
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 379 RCRRSVSSNSLPP---ARPSGPRLPFSRSRLSLGAGGRATPGVFRSLSGGPLGRRGEDTE 435
RC VSS SLP +R GP P S+ +LG GG G+ SL+ LG G +
Sbjct: 11 RCSELVSSTSLPRLSVSRLQGP--PDSQPLGTLGQGGWKLLGIVGSLAPETLGGLGTEFG 68
Query: 436 PLESP 440
P P
Sbjct: 69 PCTHP 73
>gi|239750217 PREDICTED: hypothetical protein [Homo sapiens]
Length = 363
Score = 31.6 bits (70), Expect = 1.6
Identities = 49/154 (31%), Positives = 60/154 (38%), Gaps = 24/154 (15%)
Query: 288 FWLVSAATLSWPLRVVAAYGTAHVHYQVEKLFGASSPPPGAVPSGPPLSRVATVDFTELE 347
F L SA+ +R+ V QV G SSPPP A P+ PP SR
Sbjct: 40 FRLCSASNSRLLVRLFLRGNGEKVQPQVLAFPGKSSPPPSAGPTPPPSSRPPP------- 92
Query: 348 WHICSNRQLVPSY--SEAVVMGAGSGAYLRGCQRCRRSVSSNSLPPARPSGPRLPFSRS- 404
R+ P++ EA V A +G + SS PARPS L S +
Sbjct: 93 ---SPPRRRRPAWLQDEAEVAAALAGYGF-------INPSSTGEGPARPSTQTLRRSGAF 142
Query: 405 -RLSLGAGGRATPGVFRSLSGGPLGRRGEDTEPL 437
S+G G A PG R G P RR PL
Sbjct: 143 PCESVGVPG-ARPG--RGAEGRPARRRPAPAPPL 173
>gi|239744524 PREDICTED: hypothetical protein XP_002343168 [Homo
sapiens]
Length = 363
Score = 31.6 bits (70), Expect = 1.6
Identities = 49/154 (31%), Positives = 60/154 (38%), Gaps = 24/154 (15%)
Query: 288 FWLVSAATLSWPLRVVAAYGTAHVHYQVEKLFGASSPPPGAVPSGPPLSRVATVDFTELE 347
F L SA+ +R+ V QV G SSPPP A P+ PP SR
Sbjct: 40 FRLCSASNSRLLVRLFLRGNGEKVQPQVLAFPGKSSPPPSAGPTPPPSSRPPP------- 92
Query: 348 WHICSNRQLVPSY--SEAVVMGAGSGAYLRGCQRCRRSVSSNSLPPARPSGPRLPFSRS- 404
R+ P++ EA V A +G + SS PARPS L S +
Sbjct: 93 ---SPPRRRRPAWLQDEAEVAAALAGYGF-------INPSSTGEGPARPSTQTLRRSGAF 142
Query: 405 -RLSLGAGGRATPGVFRSLSGGPLGRRGEDTEPL 437
S+G G A PG R G P RR PL
Sbjct: 143 PCESVGVPG-ARPG--RGAEGRPARRRPAPAPPL 173
>gi|189491742 ataxin 7 isoform b [Homo sapiens]
Length = 945
Score = 31.6 bits (70), Expect = 1.6
Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 17/104 (16%)
Query: 350 ICSNRQLVPSYSEAV-VMGAGSGAYLRGCQRCRRSVSSNSLPPARPSG----PRLPFSRS 404
I N + VP++ + A SGA C R VSS+S P+ PSG P P SR
Sbjct: 611 ISPNSKSVPAHGTTLNAQPAASGAMDPVCSMQSRQVSSSSSSPSTPSGLSSVPSSPMSRK 670
Query: 405 RLSLGAGGRATP-----------GVFRSLSGGPLGRRGEDTEPL 437
L + P S SGG G++ +++ PL
Sbjct: 671 PQKLKSSKSLRPKESSGNSTNCQNASSSTSGGS-GKKRKNSSPL 713
>gi|4506797 ataxin 7 isoform a [Homo sapiens]
Length = 892
Score = 31.6 bits (70), Expect = 1.6
Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 17/104 (16%)
Query: 350 ICSNRQLVPSYSEAV-VMGAGSGAYLRGCQRCRRSVSSNSLPPARPSG----PRLPFSRS 404
I N + VP++ + A SGA C R VSS+S P+ PSG P P SR
Sbjct: 611 ISPNSKSVPAHGTTLNAQPAASGAMDPVCSMQSRQVSSSSSSPSTPSGLSSVPSSPMSRK 670
Query: 405 RLSLGAGGRATP-----------GVFRSLSGGPLGRRGEDTEPL 437
L + P S SGG G++ +++ PL
Sbjct: 671 PQKLKSSKSLRPKESSGNSTNCQNASSSTSGGS-GKKRKNSSPL 713
>gi|122114658 hypothetical protein LOC23053 [Homo sapiens]
Length = 1842
Score = 31.6 bits (70), Expect = 1.6
Identities = 19/63 (30%), Positives = 27/63 (42%), Gaps = 2/63 (3%)
Query: 382 RSVSSNSLPPARPSGPRLPFSRSRLSLGAGGRATPGVFRSLSGGPLGRRGEDTEPLESP- 440
R +++ P++ GP P + L+ G+ G A PG GP E P SP
Sbjct: 1037 RPTTASQRSPSKHGGPSAPGALQPLTSGSAGPAQPGSVAGAGPGPTEGFTEKNVPESSPH 1096
Query: 441 -PC 442
PC
Sbjct: 1097 SPC 1099
>gi|239757101 PREDICTED: hypothetical protein [Homo sapiens]
Length = 309
Score = 31.2 bits (69), Expect = 2.1
Identities = 34/112 (30%), Positives = 45/112 (40%), Gaps = 24/112 (21%)
Query: 332 GPPLSRVA--TVDFTELEWHICSNRQLVPSYSEAVVMGAGSGAYLRGCQRCRRSVSSNSL 389
GPPL R V +T W ++ EA+ GA C R RS+ +++L
Sbjct: 79 GPPLMRRPGPAVTYTSYPWLRLRGKR------EALTWPGSRGATT--CGR-GRSLCTHAL 129
Query: 390 PPARPSGPRLPFSRSRLSLGAGGRATPG--VFRSLSGGPLGRRGEDTEPLES 439
PPARP GP A PG + R +G GR T P +S
Sbjct: 130 PPARPEGP-----------AAHAHEAPGASIQRVAAGAEPGRITLQTNPSQS 170
>gi|239745342 PREDICTED: hypothetical protein XP_002343430 [Homo
sapiens]
Length = 230
Score = 31.2 bits (69), Expect = 2.1
Identities = 26/86 (30%), Positives = 31/86 (36%), Gaps = 2/86 (2%)
Query: 382 RSVSSNSLPPARPSGPRLPFSRSRLSLGAGGRATPGVFRSLSGGPLGRRGEDTEPLESPP 441
R S LPP+ P P R G GGR +P L+ GPL G P
Sbjct: 65 RGPGSPPLPPSAGPAPP-PGLREAWVGGGGGRVSPAPGAGLTRGPLAPLGRRRHAPRWEP 123
Query: 442 CYEDALYFPVLIVHGDSGCQGDGQGA 467
AL P ++ C D GA
Sbjct: 124 AAAGALLGP-MVALSQRDCSRDRDGA 148
>gi|40807477 retinoic acid induced 1 [Homo sapiens]
Length = 1906
Score = 31.2 bits (69), Expect = 2.1
Identities = 19/41 (46%), Positives = 22/41 (53%), Gaps = 3/41 (7%)
Query: 62 CRLATVP--RLVLGPEAALARGAGGPP-PTYPASPCSDGYL 99
C A++P R + GPE A A AG PP P PA P G L
Sbjct: 1729 CEEASLPLERTLKGPECAAAATAGKPPRPDGPADPAKQGPL 1769
>gi|224926824 SH2B adaptor protein 1 isoform 2 [Homo sapiens]
Length = 671
Score = 30.4 bits (67), Expect = 3.6
Identities = 40/145 (27%), Positives = 52/145 (35%), Gaps = 23/145 (15%)
Query: 320 GASSPPPGAVPSGPPL---------------SRVATVDFT-ELEWHICSNRQLVPSYSEA 363
GA SP GA PS PPL +R A +DF ++ S+ Q +EA
Sbjct: 3 GAPSPEDGASPSSPPLPPPPPPSWREFCESHARAAALDFARRFRLYLASHPQYAGPGAEA 62
Query: 364 VVMGAGSGAYLRGCQ----RCRRSVSSNSLPPARPSGPRLPFSRSRLSLGAGG-RATPGV 418
+ +L+ + R S+S L P P P S S GG A G
Sbjct: 63 AFSRRFAELFLQHFEAEVARASGSLSPPILAPLSPGAEISPHDLSLESCRVGGPLAVLGP 122
Query: 419 FRSLS--GGPLGRRGEDTEPLESPP 441
RS GPL + S P
Sbjct: 123 SRSSEDLAGPLPSSVSSSSTTSSKP 147
>gi|13376611 zinc finger protein 703 [Homo sapiens]
Length = 590
Score = 30.4 bits (67), Expect = 3.6
Identities = 26/101 (25%), Positives = 38/101 (37%), Gaps = 6/101 (5%)
Query: 317 KLFGASSPPPGAVPSGPPLSRVATVDFTELEWHICSNRQLVPSYSEAVVMGAGSGAYLRG 376
+L G PPG PS PL+ + F + +C + + Y A +G S +
Sbjct: 345 QLSGGLGLPPGKPPSSSPLTGASPPSFLQ---GLCRDPYCLGGYHGASHLGGSSCSTCSA 401
Query: 377 CQRCRRSVSSNSLPPARPSGPRLPFSRSRLSLGAGGRATPG 417
S+ + P P P P + LS A A PG
Sbjct: 402 HDPAGPSLKAGGYPLVYPGHPLQP---AALSSSAAQAALPG 439
>gi|224926830 SH2B adaptor protein 1 isoform 3 [Homo sapiens]
Length = 683
Score = 30.4 bits (67), Expect = 3.6
Identities = 40/145 (27%), Positives = 52/145 (35%), Gaps = 23/145 (15%)
Query: 320 GASSPPPGAVPSGPPL---------------SRVATVDFT-ELEWHICSNRQLVPSYSEA 363
GA SP GA PS PPL +R A +DF ++ S+ Q +EA
Sbjct: 3 GAPSPEDGASPSSPPLPPPPPPSWREFCESHARAAALDFARRFRLYLASHPQYAGPGAEA 62
Query: 364 VVMGAGSGAYLRGCQ----RCRRSVSSNSLPPARPSGPRLPFSRSRLSLGAGG-RATPGV 418
+ +L+ + R S+S L P P P S S GG A G
Sbjct: 63 AFSRRFAELFLQHFEAEVARASGSLSPPILAPLSPGAEISPHDLSLESCRVGGPLAVLGP 122
Query: 419 FRSLS--GGPLGRRGEDTEPLESPP 441
RS GPL + S P
Sbjct: 123 SRSSEDLAGPLPSSVSSSSTTSSKP 147
>gi|224926828 SH2B adaptor protein 1 isoform 2 [Homo sapiens]
Length = 671
Score = 30.4 bits (67), Expect = 3.6
Identities = 40/145 (27%), Positives = 52/145 (35%), Gaps = 23/145 (15%)
Query: 320 GASSPPPGAVPSGPPL---------------SRVATVDFT-ELEWHICSNRQLVPSYSEA 363
GA SP GA PS PPL +R A +DF ++ S+ Q +EA
Sbjct: 3 GAPSPEDGASPSSPPLPPPPPPSWREFCESHARAAALDFARRFRLYLASHPQYAGPGAEA 62
Query: 364 VVMGAGSGAYLRGCQ----RCRRSVSSNSLPPARPSGPRLPFSRSRLSLGAGG-RATPGV 418
+ +L+ + R S+S L P P P S S GG A G
Sbjct: 63 AFSRRFAELFLQHFEAEVARASGSLSPPILAPLSPGAEISPHDLSLESCRVGGPLAVLGP 122
Query: 419 FRSLS--GGPLGRRGEDTEPLESPP 441
RS GPL + S P
Sbjct: 123 SRSSEDLAGPLPSSVSSSSTTSSKP 147
>gi|224926826 SH2B adaptor protein 1 isoform 1 [Homo sapiens]
Length = 756
Score = 30.4 bits (67), Expect = 3.6
Identities = 40/145 (27%), Positives = 52/145 (35%), Gaps = 23/145 (15%)
Query: 320 GASSPPPGAVPSGPPL---------------SRVATVDFT-ELEWHICSNRQLVPSYSEA 363
GA SP GA PS PPL +R A +DF ++ S+ Q +EA
Sbjct: 3 GAPSPEDGASPSSPPLPPPPPPSWREFCESHARAAALDFARRFRLYLASHPQYAGPGAEA 62
Query: 364 VVMGAGSGAYLRGCQ----RCRRSVSSNSLPPARPSGPRLPFSRSRLSLGAGG-RATPGV 418
+ +L+ + R S+S L P P P S S GG A G
Sbjct: 63 AFSRRFAELFLQHFEAEVARASGSLSPPILAPLSPGAEISPHDLSLESCRVGGPLAVLGP 122
Query: 419 FRSLS--GGPLGRRGEDTEPLESPP 441
RS GPL + S P
Sbjct: 123 SRSSEDLAGPLPSSVSSSSTTSSKP 147
>gi|224926822 SH2B adaptor protein 1 isoform 2 [Homo sapiens]
Length = 671
Score = 30.4 bits (67), Expect = 3.6
Identities = 40/145 (27%), Positives = 52/145 (35%), Gaps = 23/145 (15%)
Query: 320 GASSPPPGAVPSGPPL---------------SRVATVDFT-ELEWHICSNRQLVPSYSEA 363
GA SP GA PS PPL +R A +DF ++ S+ Q +EA
Sbjct: 3 GAPSPEDGASPSSPPLPPPPPPSWREFCESHARAAALDFARRFRLYLASHPQYAGPGAEA 62
Query: 364 VVMGAGSGAYLRGCQ----RCRRSVSSNSLPPARPSGPRLPFSRSRLSLGAGG-RATPGV 418
+ +L+ + R S+S L P P P S S GG A G
Sbjct: 63 AFSRRFAELFLQHFEAEVARASGSLSPPILAPLSPGAEISPHDLSLESCRVGGPLAVLGP 122
Query: 419 FRSLS--GGPLGRRGEDTEPLESPP 441
RS GPL + S P
Sbjct: 123 SRSSEDLAGPLPSSVSSSSTTSSKP 147
>gi|115334675 hypothetical protein LOC90268 [Homo sapiens]
Length = 352
Score = 30.4 bits (67), Expect = 3.6
Identities = 21/76 (27%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Query: 205 KELVGLAEHAATRLRFTKCFSFGSAEAEASYLTQRARFFSANEGLDDYLEAREGMHLKDV 264
K+ GLAE R C + EAE L + +F N ++ Y + +G K+V
Sbjct: 197 KKWAGLAEMRTAEARQIACDELFTNEAEEYSLYEAVKFLMLNRAIELYNDKEKG---KEV 253
Query: 265 DFRESLMVFADPRSPP 280
F L+ D + P
Sbjct: 254 PFFSVLLFARDTSNDP 269
>gi|4503925 GATA binding protein 1 [Homo sapiens]
Length = 413
Score = 30.0 bits (66), Expect = 4.7
Identities = 27/97 (27%), Positives = 38/97 (39%), Gaps = 10/97 (10%)
Query: 350 ICSNRQLVPSYSEAVVMGAGSGAYLRGCQRCRRSVSSNSLPPARPSGPRLPFSRSRLSLG 409
+C R+ P + + G GS ++L + R S +L PA PS +P S
Sbjct: 109 VCPTREDSPPQAVEDLDGKGSTSFLETLKTERLSPDLLTLGPALPSSLPVPNS------A 162
Query: 410 AGGRATPGVFRSLSGGPLGRRGEDTEPLES----PPC 442
GG F S +G PL + L PPC
Sbjct: 163 YGGPDFSSTFFSPTGSPLNSAAYSSPKLRGTLPLPPC 199
>gi|40254434 phosphodiesterase 3B [Homo sapiens]
Length = 1112
Score = 29.6 bits (65), Expect = 6.1
Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
Query: 371 GAYLRGCQRCRRSVSSNSLPPARPSGPRL--PFSRSRLSLGA 410
G + C+ C + PPA P PR PF R+RLSLGA
Sbjct: 46 GFFFHLCRFCNVELRP---PPASPQQPRRCSPFCRARLSLGA 84
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.136 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,704,590
Number of Sequences: 37866
Number of extensions: 1100278
Number of successful extensions: 4311
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 4288
Number of HSP's gapped (non-prelim): 53
length of query: 468
length of database: 18,247,518
effective HSP length: 106
effective length of query: 362
effective length of database: 14,233,722
effective search space: 5152607364
effective search space used: 5152607364
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.