Guide to the Human Genome
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Name: FAM105B Sequence: fasta or formatted (352aa) NCBI GI: 115334675
Description:

hypothetical protein LOC90268

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         33           3
 C cysteine            2.0          7           1
 D aspartate           5.1         18           2
 E glutamate          10.8         38           2
 F phenylalanine       2.8         10           2
 G glycine             5.1         18           2
 H histidine           1.7          6           1
 I isoleucine          3.7         13           1
 K lysine              6.8         24           2
 L leucine             9.7         34           2
 M methionine          3.7         13           1
 N asparagine          3.4         12           1
 P proline             5.7         20           2
 Q glutamine           4.0         14           1
 R arginine            6.2         22           2
 S serine              4.3         15           1
 T threonine           5.1         18           1
 V valine              4.8         17           2
 W tryptophan          2.0          7           1
 Y tyrosine            3.7         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC90268 
FAM105A               0.292   hypothetical protein LOC54491 
SFRS2IP               0.017   splicing factor, arginine/serine-rich 2, interactin...
C6orf174              0.016   hypothetical protein LOC387104 
C14orf4               0.016   chromosome 14 open reading frame 4 
SOX12                 0.011   SRY (sex determining region Y)-box 12 
FMN2                  0.011   formin 2 
LOC651856             0.011   PREDICTED: similar to hCG2023245 
ZYX                   0.011   zyxin 
ZYX                   0.011   zyxin 
OTUB2                 0.010   OTU domain, ubiquitin aldehyde binding 2 
ANKRD18A              0.010   PREDICTED: ankyrin repeat domain 18A 
IPO7                  0.010   importin 7 
RRP9                  0.010   RNA, U3 small nucleolar interacting protein 2 
RNF19B                0.010   ring finger protein 19B isoform a 
RNF19B                0.010   ring finger protein 19B isoform b 
RNF169                0.010   ring finger protein 169 
LOC100292143          0.009   PREDICTED: hypothetical protein 
LOC100132261          0.009   PREDICTED: similar to hCG2023245 
EDN1                  0.009   endothelin 1 
CD300LG               0.009   CD300 molecule-like family member g 
RECQL4                0.007   RecQ protein-like 4 
TMEM151A              0.007   transmembrane protein 151A 
DPP6                  0.007   dipeptidyl-peptidase 6 isoform 1 
LOC727838             0.007   PREDICTED: similar to cancer/testis antigen family ...
GIGYF2                0.007   GRB10 interacting GYF protein 2 isoform c 
GIGYF2                0.007   GRB10 interacting GYF protein 2 isoform a 
GIGYF2                0.007   GRB10 interacting GYF protein 2 isoform b 
GIGYF2                0.007   GRB10 interacting GYF protein 2 isoform b 
EP400                 0.007   E1A binding protein p400 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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