Guide to the Human Genome
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Name: C3orf27 Sequence: fasta or formatted (149aa) NCBI GI: 6680081
Description:

putative GR6 protein

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.4          5           1
 C cysteine            4.7          7           1
 D aspartate           2.7          4           2
 E glutamate           5.4          8           1
 F phenylalanine       4.7          7           1
 G glycine            10.1         15           2
 H histidine           2.0          3           1
 I isoleucine          1.3          2           1
 K lysine              2.0          3           1
 L leucine            15.4         23           2
 M methionine          1.3          2           1
 N asparagine          0.7          1           1
 P proline            10.1         15           2
 Q glutamine           6.0          9           1
 R arginine            5.4          8           1
 S serine             11.4         17           3
 T threonine           6.7         10           1
 V valine              4.7          7           2
 W tryptophan          1.3          2           1
 Y tyrosine            0.7          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   putative GR6 protein 
LOC347549             0.028   PREDICTED: hypothetical protein 
LOC347549             0.028   PREDICTED: hypothetical protein 
LOC347549             0.028   PREDICTED: hypothetical protein 
TMEM151A              0.024   transmembrane protein 151A 
ADAMTS7               0.017   ADAM metallopeptidase with thrombospondin type 1 mot...
GREB1                 0.010   GREB1 protein isoform a 
CSF3R                 0.010   colony stimulating factor 3 receptor isoform b precu...
GPRIN2                0.010   G protein-regulated inducer of neurite outgrowth 2 ...
LOC389857             0.007   PREDICTED: hypothetical protein 
LOC389857             0.007   PREDICTED: hypothetical protein 
LOC389857             0.007   PREDICTED: hypothetical protein 
LOC441495             0.007   PREDICTED: hypothetical protein 
RCE1                  0.007   prenyl protein peptidase RCE1 isoform 1 
C12orf34              0.007   hypothetical protein LOC84915 
MLL3                  0.007   myeloid/lymphoid or mixed-lineage leukemia 3 
SFRS15                0.007   splicing factor, arginine/serine-rich 15 isoform 3 ...
SFRS15                0.007   splicing factor, arginine/serine-rich 15 isoform 2 ...
SFRS15                0.007   splicing factor, arginine/serine-rich 15 isoform 1 [...
ADAM32                0.007   a disintegrin and metalloprotease domain 32 
DIP2C                 0.007   DIP2 disco-interacting protein 2 homolog C 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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