Search of human proteins with 23397473

Search of human proteins with 23397473

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|23397473 hypothetical protein LOC132228 [Homo sapiens]
         (164 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|23397473 hypothetical protein LOC132228 [Homo sapiens]             324   2e-89
gi|9966885 tumor endothelial marker 1 precursor [Homo sapiens]         35   0.038
gi|123701900 solute carrier family 12 (potassium/chloride transp...    30   1.2  
gi|58197554 transmembrane protein 201 isoform 2 [Homo sapiens]         29   1.6  
gi|195963431 transmembrane protein 201 isoform 1 [Homo sapiens]        29   1.6  
gi|122937388 MAX gene associated [Homo sapiens]                        28   3.6  
gi|5174689 small nuclear RNA activating complex, polypeptide 5 [...    28   4.6  
gi|5902084 silver homolog [Homo sapiens]                               27   6.1  
gi|93204885 chromosome 1 open reading frame 14 [Homo sapiens]          27   6.1  
gi|55742730 storkhead box 2 [Homo sapiens]                             27   6.1  
gi|198041678 solute carrier family 12 (potassium-chloride transp...    27   7.9  
gi|11968148 solute carrier family 12 (potassium-chloride transpo...    27   7.9  
gi|239750867 PREDICTED: hypothetical protein XP_002347588 [Homo ...    27   7.9  
gi|47419930 chondroitin sulfate proteoglycan 4 [Homo sapiens]          27   7.9  
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ...    27   7.9  
gi|110611906 solute carrier family 34 (sodium phosphate), member...    27   7.9  
gi|23312386 serine/threonine protein phosphatase with EF-hand mo...    27   7.9  
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]         27   7.9  

>gi|23397473 hypothetical protein LOC132228 [Homo sapiens]
          Length = 164

 Score =  324 bits (830), Expect = 2e-89
 Identities = 164/164 (100%), Positives = 164/164 (100%)

Query: 1   MPSLAPDCPLLAMPEETQEDSVAPMMPSQRSRGPLAPNHVHEVCLHQVESISDLHSGAGT 60
           MPSLAPDCPLLAMPEETQEDSVAPMMPSQRSRGPLAPNHVHEVCLHQVESISDLHSGAGT
Sbjct: 1   MPSLAPDCPLLAMPEETQEDSVAPMMPSQRSRGPLAPNHVHEVCLHQVESISDLHSGAGT 60

Query: 61  LRPYLTEEARPWDELLGVLPPSLCAQAGCSPVYRRGGFLLLLALLVLTCLVLALLAVYLS 120
           LRPYLTEEARPWDELLGVLPPSLCAQAGCSPVYRRGGFLLLLALLVLTCLVLALLAVYLS
Sbjct: 61  LRPYLTEEARPWDELLGVLPPSLCAQAGCSPVYRRGGFLLLLALLVLTCLVLALLAVYLS 120

Query: 121 VLQSESLRILAHTLRTQEETLLKLRLASLSQLRRLNSSEAQAPS 164
           VLQSESLRILAHTLRTQEETLLKLRLASLSQLRRLNSSEAQAPS
Sbjct: 121 VLQSESLRILAHTLRTQEETLLKLRLASLSQLRRLNSSEAQAPS 164


>gi|9966885 tumor endothelial marker 1 precursor [Homo sapiens]
          Length = 757

 Score = 34.7 bits (78), Expect = 0.038
 Identities = 30/115 (26%), Positives = 48/115 (41%), Gaps = 28/115 (24%)

Query: 11  LAMPEETQEDSVAPMMPSQ---RSRGPLAPNHVHEVCLHQVESISDLHSGAGTLRPYLTE 67
           +++P  TQ  ++  ++PSQ       P++P H H                     P +  
Sbjct: 606 ISVPAATQPAALPTLLPSQSPTNQTSPISPTHPHSKA------------------PQIPR 647

Query: 68  EARPWDELLGVLP-------PSLCAQAGCSPVYRRGGFLLLLALLVLTCLVLALL 115
           E  P  +L   LP       P+   +AG +   +R    LL+ALLV TC+ L +L
Sbjct: 648 EDGPSPKLALWLPSPAPTAAPTALGEAGLAEHSQRDDRWLLVALLVPTCVFLVVL 702


>gi|123701900 solute carrier family 12 (potassium/chloride
           transporters), member 7 [Homo sapiens]
          Length = 1083

 Score = 29.6 bits (65), Expect = 1.2
 Identities = 12/23 (52%), Positives = 19/23 (82%)

Query: 102 LALLVLTCLVLALLAVYLSVLQS 124
           LAL+ L C+VL++LA+Y  V++S
Sbjct: 276 LALVFLACVVLSILAIYAGVIKS 298


>gi|58197554 transmembrane protein 201 isoform 2 [Homo sapiens]
          Length = 392

 Score = 29.3 bits (64), Expect = 1.6
 Identities = 19/61 (31%), Positives = 32/61 (52%)

Query: 56  SGAGTLRPYLTEEARPWDELLGVLPPSLCAQAGCSPVYRRGGFLLLLALLVLTCLVLALL 115
           +G+ T     T  A  W +LLG+LP  +  +   +  + +     ++AL +LTCL+  LL
Sbjct: 255 NGSATPDNGTTPGAEGWRQLLGLLPEHMAEKLCEAWAFGQSHQTGVVALGLLTCLLAMLL 314

Query: 116 A 116
           A
Sbjct: 315 A 315


>gi|195963431 transmembrane protein 201 isoform 1 [Homo sapiens]
          Length = 642

 Score = 29.3 bits (64), Expect = 1.6
 Identities = 19/61 (31%), Positives = 32/61 (52%)

Query: 56  SGAGTLRPYLTEEARPWDELLGVLPPSLCAQAGCSPVYRRGGFLLLLALLVLTCLVLALL 115
           +G+ T     T  A  W +LLG+LP  +  +   +  + +     ++AL +LTCL+  LL
Sbjct: 255 NGSATPDNGTTPGAEGWRQLLGLLPEHMAEKLCEAWAFGQSHQTGVVALGLLTCLLAMLL 314

Query: 116 A 116
           A
Sbjct: 315 A 315


>gi|122937388 MAX gene associated [Homo sapiens]
          Length = 3114

 Score = 28.1 bits (61), Expect = 3.6
 Identities = 14/53 (26%), Positives = 26/53 (49%), Gaps = 4/53 (7%)

Query: 11   LAMPEETQEDSVAPMMPSQRSRGPLAPNHVHEVCLHQVESISD----LHSGAG 59
            ++MP    +D +A    S+   GPL+P  + ++   Q +++      LH G G
Sbjct: 1397 ISMPSCQDQDDMAEKSGSETPDGPLSPGKMEDISPVQTDALDSVRERLHGGKG 1449


>gi|5174689 small nuclear RNA activating complex, polypeptide 5
           [Homo sapiens]
          Length = 98

 Score = 27.7 bits (60), Expect = 4.6
 Identities = 14/26 (53%), Positives = 17/26 (65%)

Query: 134 LRTQEETLLKLRLASLSQLRRLNSSE 159
           LR +EETLL+L+ A   QL RL   E
Sbjct: 8   LRKEEETLLRLKAALHDQLNRLKVEE 33


>gi|5902084 silver homolog [Homo sapiens]
          Length = 661

 Score = 27.3 bits (59), Expect = 6.1
 Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 13/104 (12%)

Query: 13  MPEETQEDSVAP--MMPSQRSRGPLAPNHVHEVCLHQVESISDLHSGAGTLRPYLTEEAR 70
           +P+E   +  +P    P+QR   P+ P+   ++ LHQ+     L  G+GT   Y    + 
Sbjct: 520 LPKEACMEISSPGCQPPAQRLCQPVLPSPACQLVLHQI-----LKGGSGT---YCLNVSL 571

Query: 71  PWDELLGVLPPSLC---AQAGCSPVYRRGGFLLLLALLVLTCLV 111
                L V+   L     +AG   V    G LL+L  +VL  L+
Sbjct: 572 ADTNSLAVVSTQLIMPGQEAGLGQVPLIVGILLVLMAVVLASLI 615


>gi|93204885 chromosome 1 open reading frame 14 [Homo sapiens]
          Length = 653

 Score = 27.3 bits (59), Expect = 6.1
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 1/74 (1%)

Query: 5   APDCPLLAMPEETQEDSVAPMMPSQRSRGPLAPNHVHEVCLHQVESISDLHSGAGTLRPY 64
           A + PLL +PE+ +E    P +   R RG      V   C  +V            +  Y
Sbjct: 88  AAEEPLLPVPEDEEEAQPLPPVCVSRMRGMWRDEKVSLYC-DEVLQDCKAEDADEVMGKY 146

Query: 65  LTEEARPWDELLGV 78
           L+E+ +  D+ LGV
Sbjct: 147 LSEKLKLKDKWLGV 160


>gi|55742730 storkhead box 2 [Homo sapiens]
          Length = 926

 Score = 27.3 bits (59), Expect = 6.1
 Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 28  SQRSRGPLAPN--HVHEVCLHQVESISDLHSGAGTLRPYLTEEARPWDELLGVLPPSLCA 85
           S R+R  LA N   + E    Q  ++S  H GAG    +      P +E   +  PS C 
Sbjct: 860 SPRTRESLASNTSSIVESNRRQNPALSPAHGGAGPAFNFRASAEPPTNEAEKLQKPSNCL 919

Query: 86  QAGCSPV 92
           QA  + V
Sbjct: 920 QASVTSV 926


>gi|198041678 solute carrier family 12 (potassium-chloride
           transporter), member 5 isoform 1 [Homo sapiens]
          Length = 1139

 Score = 26.9 bits (58), Expect = 7.9
 Identities = 10/22 (45%), Positives = 18/22 (81%)

Query: 103 ALLVLTCLVLALLAVYLSVLQS 124
           AL+ L C++L++LA+Y  V++S
Sbjct: 279 ALVFLGCVILSILAIYAGVIKS 300


>gi|11968148 solute carrier family 12 (potassium-chloride
           transporter), member 5 isoform 2 [Homo sapiens]
          Length = 1116

 Score = 26.9 bits (58), Expect = 7.9
 Identities = 10/22 (45%), Positives = 18/22 (81%)

Query: 103 ALLVLTCLVLALLAVYLSVLQS 124
           AL+ L C++L++LA+Y  V++S
Sbjct: 256 ALVFLGCVILSILAIYAGVIKS 277


>gi|239750867 PREDICTED: hypothetical protein XP_002347588 [Homo
           sapiens]
          Length = 800

 Score = 26.9 bits (58), Expect = 7.9
 Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 1/40 (2%)

Query: 48  VESISDLHSGAGTLRPY-LTEEARPWDELLGVLPPSLCAQ 86
           +++  +L   AGT  P+ LT+ +RP D LL  L  SL ++
Sbjct: 197 LQNFEELREPAGTGPPFVLTQSSRPTDMLLNSLATSLSSR 236


>gi|47419930 chondroitin sulfate proteoglycan 4 [Homo sapiens]
          Length = 2322

 Score = 26.9 bits (58), Expect = 7.9
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 5/37 (13%)

Query: 91   PVYRRGGFLLLL-----ALLVLTCLVLALLAVYLSVL 122
            P   +GGFL  L     ++++  CLVL LLA+ L +L
Sbjct: 2207 PAVAKGGFLSFLEANMFSVIIPMCLVLLLLALILPLL 2243


>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
            sapiens]
          Length = 5537

 Score = 26.9 bits (58), Expect = 7.9
 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 24   PMMPSQRSRGPLAPNHVHEVCL--HQVESISDLHSGAGTLRPYLTEEARPWDELLGVLPP 81
            P+MP+Q     L       + +  +Q   +S  H G   L P  + +     + +G +PP
Sbjct: 3328 PLMPTQPPAHALQQRLAPSMAMVSNQGHMLSGQHGGQAGLVPQQSSQPVLSQKPMGTMPP 3387

Query: 82   SLC 84
            S+C
Sbjct: 3388 SMC 3390


>gi|110611906 solute carrier family 34 (sodium phosphate), member 2
           [Homo sapiens]
          Length = 690

 Score = 26.9 bits (58), Expect = 7.9
 Identities = 13/41 (31%), Positives = 25/41 (60%)

Query: 96  GGFLLLLALLVLTCLVLALLAVYLSVLQSESLRILAHTLRT 136
           G  LL+L+LLVL   ++ ++ +  SVL+ +   ++  T+ T
Sbjct: 365 GTILLILSLLVLCGCLIMIVKILGSVLKGQVATVIKKTINT 405


>gi|23312386 serine/threonine protein phosphatase with EF-hand
           motifs 2 [Homo sapiens]
          Length = 753

 Score = 26.9 bits (58), Expect = 7.9
 Identities = 18/48 (37%), Positives = 23/48 (47%), Gaps = 3/48 (6%)

Query: 50  SISDLHSGAGTLRPYLTEEARPWDELLGVLPPSLCAQAGCSPVYRRGG 97
           S S+  S AG LR    EE   W +++ +L     AQ GC     RGG
Sbjct: 419 SASEADSEAGELRKPTQEE---WRQVVDILWSDPMAQEGCKANTIRGG 463


>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
          Length = 1003

 Score = 26.9 bits (58), Expect = 7.9
 Identities = 12/46 (26%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 7   DCPLLAMPEETQEDSVAPMMPSQRSRGPLAPNHVHEVCLHQVESIS 52
           +CPL  +P+    D +AP+ P     GP +   + ++C H+ ++++
Sbjct: 65  ECPL-NVPKVFNFDPLAPVTPGGAGVGPASEEDMTKLCNHRRKAVA 109


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.133    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,240,698
Number of Sequences: 37866
Number of extensions: 267156
Number of successful extensions: 983
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 977
Number of HSP's gapped (non-prelim): 18
length of query: 164
length of database: 18,247,518
effective HSP length: 94
effective length of query: 70
effective length of database: 14,688,114
effective search space: 1028167980
effective search space used: 1028167980
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.