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Search of human proteins with 23308541
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|23308541 hypothetical protein LOC152756 [Homo sapiens]
(157 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|23308541 hypothetical protein LOC152756 [Homo sapiens] 336 6e-93
gi|169167163 PREDICTED: hypothetical protein [Homo sapiens] 225 1e-59
gi|169166849 PREDICTED: hypothetical protein [Homo sapiens] 223 4e-59
gi|169166280 PREDICTED: hypothetical protein [Homo sapiens] 223 4e-59
gi|239753497 PREDICTED: hypothetical protein [Homo sapiens] 30 0.65
gi|40288199 hypothetical protein LOC219287 isoform 2 [Homo sapiens] 30 0.65
gi|40288203 hypothetical protein LOC219287 isoform 1 [Homo sapiens] 30 0.65
gi|197276602 microtubule-associated protein 4 isoform 5 [Homo sa... 30 1.1
gi|197276600 microtubule-associated protein 4 isoform 4 [Homo sa... 30 1.1
gi|47519675 microtubule-associated protein 4 isoform 2 [Homo sap... 30 1.1
gi|47519639 microtubule-associated protein 4 isoform 1 [Homo sap... 30 1.1
gi|224465238 hypothetical protein LOC283999 [Homo sapiens] 29 1.4
gi|55770860 T-box 15 [Homo sapiens] 29 1.4
gi|21704281 junctophilin 2 isoform 1 [Homo sapiens] 29 1.9
gi|31542634 filamin A interacting protein 1 [Homo sapiens] 29 1.9
gi|134133244 killer cell immunoglobulin-like receptor, three dom... 28 2.5
gi|22218341 matrix metalloproteinase 21 preproprotein [Homo sapi... 28 3.2
gi|157909822 pragmin [Homo sapiens] 28 4.2
gi|134268644 killer cell immunoglobulin-like receptor, three dom... 27 5.5
gi|169204930 PREDICTED: hypothetical protein [Homo sapiens] 27 5.5
gi|239750393 PREDICTED: hypothetical protein [Homo sapiens] 27 5.5
gi|239744694 PREDICTED: hypothetical protein [Homo sapiens] 27 5.5
gi|239741731 PREDICTED: hypothetical protein XP_002342307 [Homo ... 27 5.5
gi|118601070 hypothetical protein LOC158724 [Homo sapiens] 27 5.5
gi|39752673 SH3 and cysteine rich domain 2 [Homo sapiens] 27 5.5
gi|239757169 PREDICTED: hypothetical protein [Homo sapiens] 27 7.1
gi|239756701 PREDICTED: similar to hCG1986016 [Homo sapiens] 27 7.1
gi|239755710 PREDICTED: hypothetical protein [Homo sapiens] 27 7.1
gi|239755199 PREDICTED: hypothetical protein [Homo sapiens] 27 7.1
gi|239751681 PREDICTED: hypothetical protein XP_002347965 [Homo ... 27 7.1
>gi|23308541 hypothetical protein LOC152756 [Homo sapiens]
Length = 157
Score = 336 bits (861), Expect = 6e-93
Identities = 157/157 (100%), Positives = 157/157 (100%)
Query: 1 MEGCAVRRGSCPLLPGPSAWRASPAGWAGRAKLRSWCRASGLPNRPYTLTGGRHGSVSLL 60
MEGCAVRRGSCPLLPGPSAWRASPAGWAGRAKLRSWCRASGLPNRPYTLTGGRHGSVSLL
Sbjct: 1 MEGCAVRRGSCPLLPGPSAWRASPAGWAGRAKLRSWCRASGLPNRPYTLTGGRHGSVSLL 60
Query: 61 RHPGTTTFVQQRSLHQSWEKRIVFSACPVSRSWCPERNFSGSIPAVTPPKLPGHSKSEGP 120
RHPGTTTFVQQRSLHQSWEKRIVFSACPVSRSWCPERNFSGSIPAVTPPKLPGHSKSEGP
Sbjct: 61 RHPGTTTFVQQRSLHQSWEKRIVFSACPVSRSWCPERNFSGSIPAVTPPKLPGHSKSEGP 120
Query: 121 PGKVRKRTTIRSQPLFVTRTRGFGSAVGWLPLGSPVL 157
PGKVRKRTTIRSQPLFVTRTRGFGSAVGWLPLGSPVL
Sbjct: 121 PGKVRKRTTIRSQPLFVTRTRGFGSAVGWLPLGSPVL 157
>gi|169167163 PREDICTED: hypothetical protein [Homo sapiens]
Length = 154
Score = 225 bits (573), Expect = 1e-59
Identities = 118/157 (75%), Positives = 122/157 (77%), Gaps = 3/157 (1%)
Query: 1 MEGCAVRRGSCPLLPGPSAWRASPAGWAGRAKLRSWCRASGLPNRPYTLTGGRHGSVSLL 60
MEGCAV +GSCPLL GPSAW+A PAGWA RA LRSW RASGLPNRPY S L
Sbjct: 1 MEGCAVWQGSCPLLTGPSAWKAIPAGWAKRA-LRSWHRASGLPNRPYAEPQPLRQS--LC 57
Query: 61 RHPGTTTFVQQRSLHQSWEKRIVFSACPVSRSWCPERNFSGSIPAVTPPKLPGHSKSEGP 120
R P TT VQQR LHQSWEK IVFS CPVSRS P RNFS + PAVTP KLP +S SEGP
Sbjct: 58 RDPATTILVQQRWLHQSWEKLIVFSPCPVSRSCSPGRNFSSNTPAVTPLKLPSNSNSEGP 117
Query: 121 PGKVRKRTTIRSQPLFVTRTRGFGSAVGWLPLGSPVL 157
PGK RK TIRSQPLFVTRTRGFGSAVGWLPLGSPVL
Sbjct: 118 PGKGRKIITIRSQPLFVTRTRGFGSAVGWLPLGSPVL 154
>gi|169166849 PREDICTED: hypothetical protein [Homo sapiens]
Length = 154
Score = 223 bits (569), Expect = 4e-59
Identities = 117/157 (74%), Positives = 121/157 (77%), Gaps = 3/157 (1%)
Query: 1 MEGCAVRRGSCPLLPGPSAWRASPAGWAGRAKLRSWCRASGLPNRPYTLTGGRHGSVSLL 60
MEGCAV +GSCPLL GPSAW+A PAGWA RA LRSW RASGLPNRPY S L
Sbjct: 1 MEGCAVWQGSCPLLTGPSAWKAIPAGWAKRA-LRSWHRASGLPNRPYAEPQPLRQS--LC 57
Query: 61 RHPGTTTFVQQRSLHQSWEKRIVFSACPVSRSWCPERNFSGSIPAVTPPKLPGHSKSEGP 120
R P TT VQQR LHQSWEK IVFS CPVSRS P RNFS + P VTP KLP +S SEGP
Sbjct: 58 RDPATTILVQQRWLHQSWEKLIVFSPCPVSRSCSPGRNFSSNTPVVTPLKLPSNSNSEGP 117
Query: 121 PGKVRKRTTIRSQPLFVTRTRGFGSAVGWLPLGSPVL 157
PGK RK TIRSQPLFVTRTRGFGSAVGWLPLGSPVL
Sbjct: 118 PGKGRKIITIRSQPLFVTRTRGFGSAVGWLPLGSPVL 154
>gi|169166280 PREDICTED: hypothetical protein [Homo sapiens]
Length = 154
Score = 223 bits (569), Expect = 4e-59
Identities = 117/157 (74%), Positives = 121/157 (77%), Gaps = 3/157 (1%)
Query: 1 MEGCAVRRGSCPLLPGPSAWRASPAGWAGRAKLRSWCRASGLPNRPYTLTGGRHGSVSLL 60
MEGCAV +GSCPLL GPSAW+A PAGWA RA LRSW RASGLPNRPY S L
Sbjct: 1 MEGCAVWQGSCPLLTGPSAWKAIPAGWAKRA-LRSWHRASGLPNRPYAEPQPLRQS--LC 57
Query: 61 RHPGTTTFVQQRSLHQSWEKRIVFSACPVSRSWCPERNFSGSIPAVTPPKLPGHSKSEGP 120
R P TT VQQR LHQSWEK IVFS CPVSRS P RNFS + P VTP KLP +S SEGP
Sbjct: 58 RDPATTILVQQRWLHQSWEKLIVFSPCPVSRSCSPGRNFSSNTPVVTPLKLPSNSNSEGP 117
Query: 121 PGKVRKRTTIRSQPLFVTRTRGFGSAVGWLPLGSPVL 157
PGK RK TIRSQPLFVTRTRGFGSAVGWLPLGSPVL
Sbjct: 118 PGKGRKIITIRSQPLFVTRTRGFGSAVGWLPLGSPVL 154
>gi|239753497 PREDICTED: hypothetical protein [Homo sapiens]
Length = 163
Score = 30.4 bits (67), Expect = 0.65
Identities = 39/138 (28%), Positives = 51/138 (36%), Gaps = 22/138 (15%)
Query: 15 PGPSAWRASPAGWAGRAKLRSWCRASGLPNRPYTLTGGRHGSVSLLRHPGTTTFVQQRSL 74
PG SAW A P G A+GL P G G + R G RS
Sbjct: 38 PGRSAWSAFPRGLPWNRPGTRGPLAAGLFPEPQLARQGLPGRAAGKRRVGGRPHPSPRST 97
Query: 75 HQSWEKRIVFSACPVSRSWCPERNFSGSIPA--VTPPKLPGHSKSEGPPGKVRKRTT--- 129
+ +R F A R+ S PA + +LP HS+ PPGK + T
Sbjct: 98 KDT--RRQTFLASDPGRA-------GNSAPALFLAGLRLPSHSR---PPGKRPEAATPSG 145
Query: 130 -----IRSQPLFVTRTRG 142
+RS P + +R G
Sbjct: 146 LKAHGLRSVPAWSSRLTG 163
>gi|40288199 hypothetical protein LOC219287 isoform 2 [Homo sapiens]
Length = 552
Score = 30.4 bits (67), Expect = 0.65
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 96 ERNFSGSIPAVTPPKLPGHSKSEGPPGKVRKRT 128
+R G++P++ K G KS GP G VR RT
Sbjct: 73 KRKSGGTMPSIFGVKNKGDGKSSGPTGLVRSRT 105
>gi|40288203 hypothetical protein LOC219287 isoform 1 [Homo sapiens]
Length = 671
Score = 30.4 bits (67), Expect = 0.65
Identities = 14/33 (42%), Positives = 19/33 (57%)
Query: 96 ERNFSGSIPAVTPPKLPGHSKSEGPPGKVRKRT 128
+R G++P++ K G KS GP G VR RT
Sbjct: 73 KRKSGGTMPSIFGVKNKGDGKSSGPTGLVRSRT 105
>gi|197276602 microtubule-associated protein 4 isoform 5 [Homo
sapiens]
Length = 817
Score = 29.6 bits (65), Expect = 1.1
Identities = 29/99 (29%), Positives = 40/99 (40%), Gaps = 24/99 (24%)
Query: 43 PNRPYTLTGGRHGSVSLLRHPGTTTFVQQRSLHQSWEKRIVFSACPVSRSWCPERNFSGS 102
P++P + R GS S TTT V S P SRS
Sbjct: 523 PSKPASAPASRSGSKSTQTVAKTTTAAA------------VASTGPSSRS---------- 560
Query: 103 IPAVTPPKLPGHSKSEGPPGKVRKRTTIRSQPLFVTRTR 141
P+ PK P K+EG P +V+K T +S P ++R +
Sbjct: 561 -PSTLLPKKPTAIKTEGKPAEVKKMTA-KSVPADLSRPK 597
>gi|197276600 microtubule-associated protein 4 isoform 4 [Homo
sapiens]
Length = 1135
Score = 29.6 bits (65), Expect = 1.1
Identities = 29/99 (29%), Positives = 40/99 (40%), Gaps = 24/99 (24%)
Query: 43 PNRPYTLTGGRHGSVSLLRHPGTTTFVQQRSLHQSWEKRIVFSACPVSRSWCPERNFSGS 102
P++P + R GS S TTT V S P SRS
Sbjct: 788 PSKPASAPASRSGSKSTQTVAKTTTAAA------------VASTGPSSRS---------- 825
Query: 103 IPAVTPPKLPGHSKSEGPPGKVRKRTTIRSQPLFVTRTR 141
P+ PK P K+EG P +V+K T +S P ++R +
Sbjct: 826 -PSTLLPKKPTAIKTEGKPAEVKKMTA-KSVPADLSRPK 862
>gi|47519675 microtubule-associated protein 4 isoform 2 [Homo
sapiens]
Length = 887
Score = 29.6 bits (65), Expect = 1.1
Identities = 29/99 (29%), Positives = 40/99 (40%), Gaps = 24/99 (24%)
Query: 43 PNRPYTLTGGRHGSVSLLRHPGTTTFVQQRSLHQSWEKRIVFSACPVSRSWCPERNFSGS 102
P++P + R GS S TTT V S P SRS
Sbjct: 523 PSKPASAPASRSGSKSTQTVAKTTTAAA------------VASTGPSSRS---------- 560
Query: 103 IPAVTPPKLPGHSKSEGPPGKVRKRTTIRSQPLFVTRTR 141
P+ PK P K+EG P +V+K T +S P ++R +
Sbjct: 561 -PSTLLPKKPTAIKTEGKPAEVKKMTA-KSVPADLSRPK 597
>gi|47519639 microtubule-associated protein 4 isoform 1 [Homo
sapiens]
Length = 1152
Score = 29.6 bits (65), Expect = 1.1
Identities = 29/99 (29%), Positives = 40/99 (40%), Gaps = 24/99 (24%)
Query: 43 PNRPYTLTGGRHGSVSLLRHPGTTTFVQQRSLHQSWEKRIVFSACPVSRSWCPERNFSGS 102
P++P + R GS S TTT V S P SRS
Sbjct: 788 PSKPASAPASRSGSKSTQTVAKTTTAAA------------VASTGPSSRS---------- 825
Query: 103 IPAVTPPKLPGHSKSEGPPGKVRKRTTIRSQPLFVTRTR 141
P+ PK P K+EG P +V+K T +S P ++R +
Sbjct: 826 -PSTLLPKKPTAIKTEGKPAEVKKMTA-KSVPADLSRPK 862
>gi|224465238 hypothetical protein LOC283999 [Homo sapiens]
Length = 394
Score = 29.3 bits (64), Expect = 1.4
Identities = 33/129 (25%), Positives = 44/129 (34%), Gaps = 9/129 (6%)
Query: 5 AVRRGSCPLLPGPSAWRASPAGWAGRAK--LRSWCRASGLPNRPYTLTGGRHGSVSLLRH 62
A RR P P PS P G AGRA R C A GR G LL H
Sbjct: 164 APRRPRGPATPDPSPPAGRPHGPAGRAAPGRRPGCTAQ-------LRAPGRRGRQRLLVH 216
Query: 63 PGTTTFVQQRSLHQSWEKRIVFSACPVSRSWCPERNFSGSIPAVTPPKLPGHSKSEGPPG 122
PG Q + L ++ ++ CP+ + + P L G + P
Sbjct: 217 PGGGGRRQWQRLARARRAALLALGALAHLRRCPDTGGGQHLHQLLAPGLCGDGAAVWPAA 276
Query: 123 KVRKRTTIR 131
+ +R
Sbjct: 277 HAGRPRQLR 285
>gi|55770860 T-box 15 [Homo sapiens]
Length = 496
Score = 29.3 bits (64), Expect = 1.4
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 85 SACPVSRSWCPERNFSGSIPAVTPPKLPGHSKSEGPPGKVRKRTTIRSQ 133
SA S ++ P+R S TPP LPG+SK E G++ T + Q
Sbjct: 324 SATQPSETFMPQRTPSLISGIPTPPSLPGNSKMEAYGGQLGSFPTSQFQ 372
>gi|21704281 junctophilin 2 isoform 1 [Homo sapiens]
Length = 696
Score = 28.9 bits (63), Expect = 1.9
Identities = 32/127 (25%), Positives = 47/127 (37%), Gaps = 14/127 (11%)
Query: 14 LPGPSAWRASPAGWAGRAKLRSWCRASGLPNRPYTLTGGRHGSVSLLRHPGTTTFVQQRS 73
L P AW P+G R+ S P RP T ++ L+ P + + +
Sbjct: 506 LLSPGAWNGEPSGEGSRSVTPSEGAGRRSPARPAT----ERMAIEALQAPPAPSREPEVA 561
Query: 74 LHQSWEKRIVFSACPVSRSW--CPERNFSG-----SIPAVTP---PKLPGHSKSEGPPGK 123
L+Q + V + P + PE SG S PA P P L G + P K
Sbjct: 562 LYQGYHSYAVRTTPPEPPPFEDQPEPEVSGSESAPSSPATAPLQAPTLRGPEPARETPAK 621
Query: 124 VRKRTTI 130
+ + I
Sbjct: 622 LEPKPII 628
>gi|31542634 filamin A interacting protein 1 [Homo sapiens]
Length = 1213
Score = 28.9 bits (63), Expect = 1.9
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 91 RSWCPERNFSGSIPAVTPPKLPGHSKSEGPPGKVRKRTTIRSQPLFVTRTRGFGSAVGWL 150
+SW P + P++T K P + S G PG+V + + QPL + T ++ L
Sbjct: 867 KSWIPWMRKRENGPSITQEKGPRTNSSPGHPGEV-VLSPKQGQPLHIRVTPDHENSTATL 925
Query: 151 PLGSP 155
+ SP
Sbjct: 926 EITSP 930
>gi|134133244 killer cell immunoglobulin-like receptor, three
domains, short cytoplasmic tail, 1 [Homo sapiens]
Length = 382
Score = 28.5 bits (62), Expect = 2.5
Identities = 20/72 (27%), Positives = 28/72 (38%), Gaps = 15/72 (20%)
Query: 23 SPAGWAGRAKLRSWCRASGLPNRPYTL-TGGRHGSVSLLRHPGTTTFVQQRSLHQSWEKR 81
SP GW+ P+ P + G H SLL HPG +R + Q W
Sbjct: 102 SPTGWSA-------------PSNPMVIMVTGNHRKPSLLAHPGPLVKSGERVILQCWSD- 147
Query: 82 IVFSACPVSRSW 93
I+F + + W
Sbjct: 148 IMFEHFFLHKEW 159
>gi|22218341 matrix metalloproteinase 21 preproprotein [Homo
sapiens]
Length = 569
Score = 28.1 bits (61), Expect = 3.2
Identities = 17/53 (32%), Positives = 24/53 (45%), Gaps = 8/53 (15%)
Query: 103 IPAVTPPKLPGHSKSEGPPGKVRKRTTIRSQPLFVTRTRGFGSAVGWLPLGSP 155
+P + PP GPP + R R + R+ PL ++R GW P G P
Sbjct: 119 VPDMRPPPPSAPPSPPGPPPRARSRRSPRA-PLSLSRR-------GWQPRGYP 163
>gi|157909822 pragmin [Homo sapiens]
Length = 1402
Score = 27.7 bits (60), Expect = 4.2
Identities = 14/55 (25%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Query: 87 CPVSRSWCPERNFSGSIPAVTPPKLPGHSKSEGPPGKVRKRTTIRSQPLFVTRTR 141
C + + PE+ P VTP + G + PP R+ T + +P++ T+
Sbjct: 364 CSLMKEPAPEKQQDPGCPGVTPSRCLGLTGEPQPPAHPREAT--QPEPIYAESTK 416
>gi|134268644 killer cell immunoglobulin-like receptor, three
domains, long cytoplasmic tail, 1 precursor [Homo
sapiens]
Length = 444
Score = 27.3 bits (59), Expect = 5.5
Identities = 17/57 (29%), Positives = 22/57 (38%), Gaps = 14/57 (24%)
Query: 23 SPAGWAGRAKLRSWCRASGLPNRPYTL-TGGRHGSVSLLRHPGTTTFVQQRSLHQSW 78
SP GW+ P+ P + G H SLL HPG +R + Q W
Sbjct: 102 SPTGWSA-------------PSNPVVIMVTGNHRKPSLLAHPGPLVKSGERVILQCW 145
>gi|169204930 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 27.3 bits (59), Expect = 5.5
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 14 LPGPSAWRASPAGWAGRAKLRSWCRASGLPNRPYTLTGGRHGS 56
L P A+P GW G+ R GLP L GG GS
Sbjct: 164 LGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHA-ALRGGGGGS 205
>gi|239750393 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 27.3 bits (59), Expect = 5.5
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 14 LPGPSAWRASPAGWAGRAKLRSWCRASGLPNRPYTLTGGRHGS 56
L P A+P GW G+ R GLP L GG GS
Sbjct: 164 LGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHA-ALRGGGGGS 205
>gi|239744694 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 27.3 bits (59), Expect = 5.5
Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 14 LPGPSAWRASPAGWAGRAKLRSWCRASGLPNRPYTLTGGRHGS 56
L P A+P GW G+ R GLP L GG GS
Sbjct: 164 LGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHA-ALRGGGGGS 205
>gi|239741731 PREDICTED: hypothetical protein XP_002342307 [Homo
sapiens]
Length = 316
Score = 27.3 bits (59), Expect = 5.5
Identities = 29/113 (25%), Positives = 42/113 (37%), Gaps = 1/113 (0%)
Query: 12 PLLPGPSAWRASPAGWA-GRAKLRSWCRASGLPNRPYTLTGGRHGSVSLLRHPGTTTFVQ 70
P PGP A +A + G+A R+ + P L GGR + + PGT +
Sbjct: 108 PQSPGPCAPQALASLLGPGKAGCRARLQGGSSGASPRRLPGGRGPAAAFAVEPGTGQRPR 167
Query: 71 QRSLHQSWEKRIVFSACPVSRSWCPERNFSGSIPAVTPPKLPGHSKSEGPPGK 123
SL Q+ V P S F+ P + PG + PP +
Sbjct: 168 NTSLAQASRSGTVPGLPPASLQPLRVPYFAPPGPHDPTSRGPGRLLTREPPSR 220
>gi|118601070 hypothetical protein LOC158724 [Homo sapiens]
Length = 791
Score = 27.3 bits (59), Expect = 5.5
Identities = 13/37 (35%), Positives = 18/37 (48%)
Query: 108 PPKLPGHSKSEGPPGKVRKRTTIRSQPLFVTRTRGFG 144
PPK S P K R+ +++RS+P RT G
Sbjct: 495 PPKTRRTSSLRSEPPKTRRTSSLRSEPPKTRRTSSLG 531
>gi|39752673 SH3 and cysteine rich domain 2 [Homo sapiens]
Length = 411
Score = 27.3 bits (59), Expect = 5.5
Identities = 16/50 (32%), Positives = 20/50 (40%)
Query: 73 SLHQSWEKRIVFSACPVSRSWCPERNFSGSIPAVTPPKLPGHSKSEGPPG 122
S+H + I CP S RNFS + PP + SK P G
Sbjct: 147 SVHLWCSEEISHQQCPGKTSTSFRRNFSSPLLVHEPPPVCATSKESPPTG 196
>gi|239757169 PREDICTED: hypothetical protein [Homo sapiens]
Length = 849
Score = 26.9 bits (58), Expect = 7.1
Identities = 11/22 (50%), Positives = 12/22 (54%)
Query: 19 AWRASPAGWAGRAKLRSWCRAS 40
AWR S W R + RSW AS
Sbjct: 136 AWRKSSTPWLVRVRRRSWMTAS 157
>gi|239756701 PREDICTED: similar to hCG1986016 [Homo sapiens]
Length = 325
Score = 26.9 bits (58), Expect = 7.1
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Query: 7 RRGSCPLLPGPSAWRASPAGWAGRAKLRSWCRASGLPNRPYTLTGG-RHGSVS 58
R G P GPSAW P W+ + R R + L R + G R GS +
Sbjct: 252 RPGEDPPFAGPSAWLHVPLFWSLLERPRPILRLAYLEGRRFPWNAGLRPGSAA 304
>gi|239755710 PREDICTED: hypothetical protein [Homo sapiens]
Length = 402
Score = 26.9 bits (58), Expect = 7.1
Identities = 32/110 (29%), Positives = 43/110 (39%), Gaps = 9/110 (8%)
Query: 12 PLLPGPSAWRASPAGWA-GRAKLRSWCRASGLPNRPYTLTGGRHGSVSLLRHPGTTTFVQ 70
P PGP A +A + G+A R+ + P L GGR + + PGT +
Sbjct: 108 PQSPGPCAPQALASLLGPGKAGCRTRLQGGSSGASPRRLPGGRGPAAAFAVEPGTGQRPR 167
Query: 71 QRSLHQSWEKRIVFSACPVSRSWCPERNFSGSIPAVTPPKLPGHSKSEGP 120
SL Q+ V P S P R +P + PP P S GP
Sbjct: 168 NTSLAQASRSGTVPGLPPASLQ--PLR-----LPYLAPPG-PHDPTSRGP 209
>gi|239755199 PREDICTED: hypothetical protein [Homo sapiens]
Length = 279
Score = 26.9 bits (58), Expect = 7.1
Identities = 16/40 (40%), Positives = 18/40 (45%), Gaps = 7/40 (17%)
Query: 1 MEGCAVRRGSCPLL-------PGPSAWRASPAGWAGRAKL 33
ME C + GS LL PG WRA PA +G L
Sbjct: 1 MEDCGLLLGSTALLAFEALQSPGREEWRAGPAPVSGEGLL 40
>gi|239751681 PREDICTED: hypothetical protein XP_002347965 [Homo
sapiens]
Length = 849
Score = 26.9 bits (58), Expect = 7.1
Identities = 11/22 (50%), Positives = 12/22 (54%)
Query: 19 AWRASPAGWAGRAKLRSWCRAS 40
AWR S W R + RSW AS
Sbjct: 136 AWRKSSTPWLVRVRRRSWMTAS 157
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.458
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,341,928
Number of Sequences: 37866
Number of extensions: 436088
Number of successful extensions: 1946
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 1885
Number of HSP's gapped (non-prelim): 93
length of query: 157
length of database: 18,247,518
effective HSP length: 94
effective length of query: 63
effective length of database: 14,688,114
effective search space: 925351182
effective search space used: 925351182
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.