Search of human proteins with 23308501

Search of human proteins with 23308501

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|23308501 hypothetical protein LOC124045 [Homo sapiens]
         (139 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|23308501 hypothetical protein LOC124045 [Homo sapiens]             283   2e-77
gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens]             33   0.098
gi|55769550 PHD finger protein 14 isoform 1 [Homo sapiens]             33   0.098
gi|72534722 oligonucleotide/oligosaccharide-binding fold contain...    31   0.28 
gi|7706687 Enah/Vasp-like [Homo sapiens]                               31   0.28 
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]         31   0.28 
gi|52426735 ankyrin 2 isoform 1 [Homo sapiens]                         31   0.37 
gi|157738619 smoothelin-like 1 [Homo sapiens]                          31   0.37 
gi|42560244 peptidylprolyl isomerase G [Homo sapiens]                  30   0.48 
gi|168229156 NFKB activating protein [Homo sapiens]                    30   0.63 
gi|5453904 RAD51 associated protein 1 isoform b [Homo sapiens]         30   0.63 
gi|195947391 RAD51 associated protein 1 isoform a [Homo sapiens]       30   0.63 
gi|28557777 immunoglobulin-like domain containing receptor 1 [Ho...    30   0.63 
gi|225637489 hypothetical protein LOC54777 [Homo sapiens]              30   0.83 
gi|197383784 zinc finger protein 213 [Homo sapiens]                    30   0.83 
gi|32698678 zinc finger protein 213 [Homo sapiens]                     30   0.83 
gi|27734775 hypothetical protein LOC286499 [Homo sapiens]              30   0.83 
gi|223555917 metadherin [Homo sapiens]                                 29   1.1  
gi|67089157 promyelocytic leukemia protein isoform 2 [Homo sapiens]    29   1.1  
gi|239752618 PREDICTED: similar to promyelocytic leukemia protei...    29   1.1  
gi|169203406 PREDICTED: hypothetical protein [Homo sapiens]            29   1.1  
gi|169202578 PREDICTED: hypothetical protein [Homo sapiens]            29   1.1  
gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]     29   1.1  
gi|112363080 microtubule associated serine/threonine kinase 2 [H...    29   1.4  
gi|116292168 KRAB A domain containing 1 [Homo sapiens]                 29   1.4  
gi|67089160 promyelocytic leukemia protein isoform 11 [Homo sapi...    28   1.8  
gi|15451765 promyelocytic leukemia protein isoform 9 [Homo sapiens]    28   1.8  
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa...    28   1.8  
gi|21361657 protein disulfide-isomerase A3 precursor [Homo sapiens]    28   1.8  
gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens]     28   1.8  

>gi|23308501 hypothetical protein LOC124045 [Homo sapiens]
          Length = 139

 Score =  283 bits (725), Expect = 2e-77
 Identities = 139/139 (100%), Positives = 139/139 (100%)

Query: 1   MVTHAAGARTFCEEQKKGSTYSVPKSKEKLMEKHSQEARQADRESEKPVDSLHPGAGTAK 60
           MVTHAAGARTFCEEQKKGSTYSVPKSKEKLMEKHSQEARQADRESEKPVDSLHPGAGTAK
Sbjct: 1   MVTHAAGARTFCEEQKKGSTYSVPKSKEKLMEKHSQEARQADRESEKPVDSLHPGAGTAK 60

Query: 61  HPPPAASLEEKPDVKQKSSRKKVVVPQIIITRASNETLVSCSSSGSDQQRTIREPEDWGP 120
           HPPPAASLEEKPDVKQKSSRKKVVVPQIIITRASNETLVSCSSSGSDQQRTIREPEDWGP
Sbjct: 61  HPPPAASLEEKPDVKQKSSRKKVVVPQIIITRASNETLVSCSSSGSDQQRTIREPEDWGP 120

Query: 121 YRRHRNPSTADAYNSHLKE 139
           YRRHRNPSTADAYNSHLKE
Sbjct: 121 YRRHRNPSTADAYNSHLKE 139


>gi|55769548 PHD finger protein 14 isoform 2 [Homo sapiens]
          Length = 888

 Score = 32.7 bits (73), Expect = 0.098
 Identities = 27/114 (23%), Positives = 44/114 (38%), Gaps = 6/114 (5%)

Query: 13  EEQKKGSTYSVPKSKEKLMEKHSQEARQADRESEKPVDSLHPGAG----TAKHPPPAASL 68
           EE++ G      K KEK  EK  ++ ++ ++E EK   S +  A     T    PPA + 
Sbjct: 103 EEEENGERPRKKKEKEKEKEKEKEKEKEREKEKEKATVSENVAASAAATTPATSPPAVNT 162

Query: 69  EEKPDVKQKSSRKKVVVPQIIITRASNETL--VSCSSSGSDQQRTIREPEDWGP 120
                    ++ ++V  P+    R +   L  VS             +  DW P
Sbjct: 163 SPSVPTTTTATEEQVSEPKKWNLRRNRPLLDFVSMEELNDMDDYDSEDDNDWRP 216


>gi|55769550 PHD finger protein 14 isoform 1 [Homo sapiens]
          Length = 948

 Score = 32.7 bits (73), Expect = 0.098
 Identities = 27/114 (23%), Positives = 44/114 (38%), Gaps = 6/114 (5%)

Query: 13  EEQKKGSTYSVPKSKEKLMEKHSQEARQADRESEKPVDSLHPGAG----TAKHPPPAASL 68
           EE++ G      K KEK  EK  ++ ++ ++E EK   S +  A     T    PPA + 
Sbjct: 103 EEEENGERPRKKKEKEKEKEKEKEKEKEREKEKEKATVSENVAASAAATTPATSPPAVNT 162

Query: 69  EEKPDVKQKSSRKKVVVPQIIITRASNETL--VSCSSSGSDQQRTIREPEDWGP 120
                    ++ ++V  P+    R +   L  VS             +  DW P
Sbjct: 163 SPSVPTTTTATEEQVSEPKKWNLRRNRPLLDFVSMEELNDMDDYDSEDDNDWRP 216


>gi|72534722 oligonucleotide/oligosaccharide-binding fold containing
           2A [Homo sapiens]
          Length = 204

 Score = 31.2 bits (69), Expect = 0.28
 Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 10/98 (10%)

Query: 23  VPKSKEKLMEKHSQEARQADRESEKPVDSLHPGAGTAKHPPPAASLEEKPDVKQ------ 76
           VP   E   +   Q+ + A  +SE+  +S++   GT    P    +   P+ ++      
Sbjct: 109 VPNFSEPNPDYRGQQNKGA--QSEQKNNSMNSNMGTGTFGPVGNGVHTGPESREHQFSHA 166

Query: 77  -KSSRKKVVVPQIIITRASNETLVSCSSSGSDQQRTIR 113
            +S+ + ++ PQ+  T ASN+T+++  S+G D +R  +
Sbjct: 167 GRSNGRGLINPQLQGT-ASNQTVMTTISNGRDPRRAFK 203


>gi|7706687 Enah/Vasp-like [Homo sapiens]
          Length = 418

 Score = 31.2 bits (69), Expect = 0.28
 Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 9/64 (14%)

Query: 29  KLMEKHSQEARQADRESEK---------PVDSLHPGAGTAKHPPPAASLEEKPDVKQKSS 79
           KL+ K  + A Q+D+ +EK         P  S  PG   A  PP ++    KP  +  S 
Sbjct: 275 KLLAKRRKAASQSDKPAEKKEDESQMEDPSTSPSPGTRAASQPPNSSEAGRKPWERSNSV 334

Query: 80  RKKV 83
            K V
Sbjct: 335 EKPV 338


>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
          Length = 904

 Score = 31.2 bits (69), Expect = 0.28
 Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 9/71 (12%)

Query: 54  PGAGTAKHPPPAASLEEKPDVKQKSSRKKVVVPQIIITRASNETLVSCSSSGSDQQRTIR 113
           P    +  PPP   +   P  KQ+SS          +T+  + +L S    GS   R+ R
Sbjct: 621 PKRRASPSPPPKRRVSHSPPPKQRSSP---------VTKRRSPSLSSKHRKGSSPSRSTR 671

Query: 114 EPEDWGPYRRH 124
           E     P +RH
Sbjct: 672 EARSPQPNKRH 682



 Score = 27.7 bits (60), Expect = 3.1
 Identities = 29/115 (25%), Positives = 42/115 (36%), Gaps = 24/115 (20%)

Query: 15  QKKGSTYSVPKSKEKLMEKHSQEARQADRESEKPVDSLHPGAGTAKHPPPAASLEEKPDV 74
           +KK  T  +P+   K+ E   QEA                 +   K P P    E K   
Sbjct: 215 EKKEKTPELPEPSVKVKEPSVQEATST--------------SDILKVPKPEPIPEPKEPS 260

Query: 75  KQKSSRKKVVVPQIIITRASNETLVSCSSSGSDQQRT-IREPEDWGPYRRHRNPS 128
            +K+S+K+         +   +T     S    + RT  R P    P RRHR+ S
Sbjct: 261 PEKNSKKE---------KEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRS 306


>gi|52426735 ankyrin 2 isoform 1 [Homo sapiens]
          Length = 3957

 Score = 30.8 bits (68), Expect = 0.37
 Identities = 27/105 (25%), Positives = 39/105 (37%), Gaps = 18/105 (17%)

Query: 24   PKSKEKLMEKHSQEARQADRESEKPVDS--------LHPGAGTAKHPP--PAASLEEKPD 73
            P S     EKHS  +     E   PV S        + P   T K PP  P+   E+ P 
Sbjct: 1868 PASSSSKTEKHSPVSPSTKTERHSPVSSTKTERHPPVSPSGKTDKRPPVSPSGRTEKHPP 1927

Query: 74   VKQKSSRKKVVVP--------QIIITRASNETLVSCSSSGSDQQR 110
            V    + K++ V         Q + T    E  +  S SG  +++
Sbjct: 1928 VSPGRTEKRLPVSPSGRTDKHQPVSTAGKTEKHLPVSPSGKTEKQ 1972


>gi|157738619 smoothelin-like 1 [Homo sapiens]
          Length = 512

 Score = 30.8 bits (68), Expect = 0.37
 Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 1/66 (1%)

Query: 16  KKGSTYSVPKSKEKLMEKHSQEARQADRESEKPVDSLHPGAGTAKHPPPAASLEEKPDVK 75
           +K  T S PK  E+     + E ++A+ +  KP       A     P P A++EE+ D K
Sbjct: 132 RKEETKSEPKEAEEKESTLASEKQKAEEKEAKPESGQKADANDRDKPEPKATVEEE-DAK 190

Query: 76  QKSSRK 81
             S  +
Sbjct: 191 TASQEE 196


>gi|42560244 peptidylprolyl isomerase G [Homo sapiens]
          Length = 754

 Score = 30.4 bits (67), Expect = 0.48
 Identities = 19/76 (25%), Positives = 32/76 (42%)

Query: 6   AGARTFCEEQKKGSTYSVPKSKEKLMEKHSQEARQADRESEKPVDSLHPGAGTAKHPPPA 65
           A ++ F E +       +PKSK K  EK   ++  +   S    DS      ++      
Sbjct: 161 AASKPFAEVRILSCGELIPKSKVKKEEKKRHKSSSSSSSSSSDSDSSSDSQSSSDSSDSE 220

Query: 66  ASLEEKPDVKQKSSRK 81
           ++ EEK   ++K  RK
Sbjct: 221 SATEEKSKKRKKKHRK 236


>gi|168229156 NFKB activating protein [Homo sapiens]
          Length = 415

 Score = 30.0 bits (66), Expect = 0.63
 Identities = 31/126 (24%), Positives = 49/126 (38%), Gaps = 17/126 (13%)

Query: 8   ARTFCEEQKKGSTYSVPKSKEKLME-----KHSQEARQADRESEKPVDSLHPGAGTAKHP 62
           A T  EE+KK S+ S  +SK++  +     KH + +  +D +S+   DS        +  
Sbjct: 175 ASTSEEEKKKKSSRSKERSKKRRKKKSSKRKHKKYSEDSDSDSDSETDS--SDEDNKRRA 232

Query: 63  PPAASLEEKPDVKQKSSRKKVVVPQIIITRASNETLVSCSSSGSDQQRTIREPEDWGPYR 122
             A   E+K   + K  +KK         R+      S  SS  + Q    E   W    
Sbjct: 233 KKAKKKEKKKKHRSKKYKKK---------RSKKSRKESSDSSSKESQEEFLE-NPWKDRT 282

Query: 123 RHRNPS 128
           +   PS
Sbjct: 283 KAEEPS 288


>gi|5453904 RAD51 associated protein 1 isoform b [Homo sapiens]
          Length = 335

 Score = 30.0 bits (66), Expect = 0.63
 Identities = 19/69 (27%), Positives = 30/69 (43%)

Query: 11  FCEEQKKGSTYSVPKSKEKLMEKHSQEARQADRESEKPVDSLHPGAGTAKHPPPAASLEE 70
           FCE +     +S+ KSK K ++K   + +    + EK   S      T+    PAA   E
Sbjct: 195 FCESEDNDEDFSMRKSKVKEIKKKEVKVKSPVEKKEKKSKSKCNALVTSVDSAPAAVKSE 254

Query: 71  KPDVKQKSS 79
              + +K S
Sbjct: 255 SQSLPKKVS 263


>gi|195947391 RAD51 associated protein 1 isoform a [Homo sapiens]
          Length = 352

 Score = 30.0 bits (66), Expect = 0.63
 Identities = 19/69 (27%), Positives = 30/69 (43%)

Query: 11  FCEEQKKGSTYSVPKSKEKLMEKHSQEARQADRESEKPVDSLHPGAGTAKHPPPAASLEE 70
           FCE +     +S+ KSK K ++K   + +    + EK   S      T+    PAA   E
Sbjct: 212 FCESEDNDEDFSMRKSKVKEIKKKEVKVKSPVEKKEKKSKSKCNALVTSVDSAPAAVKSE 271

Query: 71  KPDVKQKSS 79
              + +K S
Sbjct: 272 SQSLPKKVS 280


>gi|28557777 immunoglobulin-like domain containing receptor 1 [Homo
           sapiens]
          Length = 502

 Score = 30.0 bits (66), Expect = 0.63
 Identities = 23/89 (25%), Positives = 39/89 (43%), Gaps = 13/89 (14%)

Query: 41  ADRESEKPVDSLHPGAGTAKHPPPAASLEEKP------DVKQKSSRKKVVVPQIIITRAS 94
           +DR+S   V S         HPP  +  +E+P      +  Q+  R++         R+ 
Sbjct: 372 SDRDSLSDVPSSSEARWRPSHPPFRSRCQERPRRPSPRESTQRHGRRRR-------HRSY 424

Query: 95  NETLVSCSSSGSDQQRTIREPEDWGPYRR 123
           +  L S  SS S ++   R+P+ W  +RR
Sbjct: 425 SPPLPSGLSSWSSEEDKERQPQSWRAHRR 453


>gi|225637489 hypothetical protein LOC54777 [Homo sapiens]
          Length = 2441

 Score = 29.6 bits (65), Expect = 0.83
 Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 5    AAGARTFCEEQKKGSTYSVPKSKEKLMEKHSQEARQADRESEKPVDSLHPGAGTAKHPPP 64
            A  +     +++K +  S  K KE+  EK ++ +++ D+E  K      P    ++ P P
Sbjct: 1079 ATSSHLLLPKKEKENERSKEKEKERSKEKENERSKEKDKEKGKEEKVKEPKQ--SQSPAP 1136

Query: 65   AASLEEKP 72
               LE+ P
Sbjct: 1137 IKQLEDLP 1144


>gi|197383784 zinc finger protein 213 [Homo sapiens]
          Length = 459

 Score = 29.6 bits (65), Expect = 0.83
 Identities = 24/92 (26%), Positives = 33/92 (35%), Gaps = 1/92 (1%)

Query: 14  EQKKGSTYSVPKSKEKLMEKHSQEARQADRESEKPVDSLHPGAGTAKHPPPAASLEEKPD 73
           EQ  GS        E L +K   +A + D  SE+           A  PPP      +P 
Sbjct: 107 EQHPGSGEEAVALVEDL-QKQPVKAWRQDVPSEEAEPEAAGRGSQATGPPPTVGARRRPS 165

Query: 74  VKQKSSRKKVVVPQIIITRASNETLVSCSSSG 105
           V Q+        P ++      ET  +C  SG
Sbjct: 166 VPQEQHSHSAQPPALLKEGRPGETTDTCFVSG 197


>gi|32698678 zinc finger protein 213 [Homo sapiens]
          Length = 459

 Score = 29.6 bits (65), Expect = 0.83
 Identities = 24/92 (26%), Positives = 33/92 (35%), Gaps = 1/92 (1%)

Query: 14  EQKKGSTYSVPKSKEKLMEKHSQEARQADRESEKPVDSLHPGAGTAKHPPPAASLEEKPD 73
           EQ  GS        E L +K   +A + D  SE+           A  PPP      +P 
Sbjct: 107 EQHPGSGEEAVALVEDL-QKQPVKAWRQDVPSEEAEPEAAGRGSQATGPPPTVGARRRPS 165

Query: 74  VKQKSSRKKVVVPQIIITRASNETLVSCSSSG 105
           V Q+        P ++      ET  +C  SG
Sbjct: 166 VPQEQHSHSAQPPALLKEGRPGETTDTCFVSG 197


>gi|27734775 hypothetical protein LOC286499 [Homo sapiens]
          Length = 248

 Score = 29.6 bits (65), Expect = 0.83
 Identities = 13/72 (18%), Positives = 37/72 (51%)

Query: 11  FCEEQKKGSTYSVPKSKEKLMEKHSQEARQADRESEKPVDSLHPGAGTAKHPPPAASLEE 70
           F E+  +     + KS+EKL+  +   +++ +R+ ++   S    + ++     ++S + 
Sbjct: 61  FEEKMNENWKKELEKSREKLLSGNESSSKKRERKKKRKKKSCRSSSSSSSSDSSSSSSDS 120

Query: 71  KPDVKQKSSRKK 82
           + + K++  R+K
Sbjct: 121 EDEEKKQGKRRK 132


>gi|223555917 metadherin [Homo sapiens]
          Length = 582

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 9/68 (13%)

Query: 13  EEQKKGSTYSVPKSKEKLMEKHSQEARQADRESEKPVDSLHPGAGTAKHPPPAASLEEKP 72
           EEQKK       K+++KL EK     R  +    + V +  P + TAK PP      EK 
Sbjct: 112 EEQKK-------KNRKKLSEKPKPNGRTVEVAEGEAVRT--PQSVTAKQPPEIDKKNEKS 162

Query: 73  DVKQKSSR 80
              +K S+
Sbjct: 163 KKNKKKSK 170


>gi|67089157 promyelocytic leukemia protein isoform 2 [Homo sapiens]
          Length = 611

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 27/114 (23%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 8   ARTFCEEQKKGSTYSVPKSKEKLMEKHSQEARQADRESEKPVDSLHPGAGTAKHPPPAAS 67
           + T   +++K S    P+   K+  +  +EAR A    E+P     P    A  PP    
Sbjct: 469 SNTTTAQKRKCSQTQCPRKVIKMESEEGKEARLARSSPEQP----RPSTSKAVSPP---H 521

Query: 68  LEEKPDVKQKSSRKKVVVPQII-----ITRASNETLVSCSSSGSDQQRTIREPE 116
           L+  P  +      +V +P           A    +V  SS  SD + ++  PE
Sbjct: 522 LDGPPSPRSPVIGSEVFLPNSNHVASGAGEAEERVVVISSSEDSDAENSVSGPE 575


>gi|239752618 PREDICTED: similar to promyelocytic leukemia protein
           [Homo sapiens]
          Length = 147

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 27/114 (23%), Positives = 44/114 (38%), Gaps = 12/114 (10%)

Query: 8   ARTFCEEQKKGSTYSVPKSKEKLMEKHSQEARQADRESEKPVDSLHPGAGTAKHPPPAAS 67
           + T   +++K S    P+   K+  +  +EAR A    E+P     P    A  PP    
Sbjct: 5   SNTTTAQKRKCSQTQCPRKVIKMESEEGKEARLARSSPEQP----RPSTSKAVSPP---H 57

Query: 68  LEEKPDVKQKSSRKKVVVPQII-----ITRASNETLVSCSSSGSDQQRTIREPE 116
           L+  P  +      +V +P           A    +V  SS  SD + ++  PE
Sbjct: 58  LDGPPSPRSPVIGSEVFLPNSNHVASGAGEAEERVVVISSSEDSDAENSVSGPE 111


>gi|169203406 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 145

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 16/52 (30%), Positives = 24/52 (46%)

Query: 22 SVPKSKEKLMEKHSQEARQADRESEKPVDSLHPGAGTAKHPPPAASLEEKPD 73
          +VP+  +             +  +E+   +  PGAG A   P AASL E+PD
Sbjct: 38 TVPRPSQVTSASSKSPFSGHEAPAERGDGACGPGAGAAAPAPAAASLPEEPD 89


>gi|169202578 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 145

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 16/52 (30%), Positives = 24/52 (46%)

Query: 22 SVPKSKEKLMEKHSQEARQADRESEKPVDSLHPGAGTAKHPPPAASLEEKPD 73
          +VP+  +             +  +E+   +  PGAG A   P AASL E+PD
Sbjct: 38 TVPRPSQVTSASSKSPFSGHEAPAERGDGACGPGAGAAAPAPAAASLPEEPD 89


>gi|14790190 spen homolog, transcriptional regulator [Homo sapiens]
          Length = 3664

 Score = 29.3 bits (64), Expect = 1.1
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)

Query: 31   MEKHSQEARQADRESEKPVDSLHPGAGTAKHPPPAASLE--EKPDVKQKSSRKK 82
            +++ S E + A+ E+          AGT K+PP  A +E  EK    +K+S+ K
Sbjct: 2023 VKESSMEPKAAEEEAGSEQKRDRKDAGTDKNPPETAPVEVVEKKPAPEKNSKSK 2076


>gi|112363080 microtubule associated serine/threonine kinase 2 [Homo
            sapiens]
          Length = 1798

 Score = 28.9 bits (63), Expect = 1.4
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 18   GSTYSVPKSKEKLMEKHSQEARQADRESEKPVDSLHPGAGTAKHPPPAASLEEKP 72
            GS ++ P S   L  K  ++ R   R+S   +  L P A T   PPP AS +  P
Sbjct: 1310 GSGHTRPSSLHGLAPKLQRQYRSPRRKSAGSIP-LSPLAHTPSPPPPTASPQRSP 1363


>gi|116292168 KRAB A domain containing 1 [Homo sapiens]
          Length = 1030

 Score = 28.9 bits (63), Expect = 1.4
 Identities = 12/24 (50%), Positives = 17/24 (70%)

Query: 55  GAGTAKHPPPAASLEEKPDVKQKS 78
           GAGTA+ P P + LE++P V + S
Sbjct: 714 GAGTAQDPCPVSQLEKRPRVSEAS 737


>gi|67089160 promyelocytic leukemia protein isoform 11 [Homo
           sapiens]
          Length = 781

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 27/113 (23%), Positives = 43/113 (38%), Gaps = 12/113 (10%)

Query: 8   ARTFCEEQKKGSTYSVPKSKEKLMEKHSQEARQADRESEKPVDSLHPGAGTAKHPPPAAS 67
           + T   +++K S    P+   K+  +  +EAR A    E+P     P    A  PP    
Sbjct: 421 SNTTTAQKRKCSQTQCPRKVIKMESEEGKEARLARSSPEQP----RPSTSKAVSPP---H 473

Query: 68  LEEKPDVKQKSSRKKVVVPQII-----ITRASNETLVSCSSSGSDQQRTIREP 115
           L+  P  +      +V +P           A    +V  SS  SD + +  EP
Sbjct: 474 LDGPPSPRSPVIGSEVFLPNSNHVASGAGEAEERVVVISSSEDSDAENSCMEP 526


>gi|15451765 promyelocytic leukemia protein isoform 9 [Homo sapiens]
          Length = 829

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 27/113 (23%), Positives = 43/113 (38%), Gaps = 12/113 (10%)

Query: 8   ARTFCEEQKKGSTYSVPKSKEKLMEKHSQEARQADRESEKPVDSLHPGAGTAKHPPPAAS 67
           + T   +++K S    P+   K+  +  +EAR A    E+P     P    A  PP    
Sbjct: 469 SNTTTAQKRKCSQTQCPRKVIKMESEEGKEARLARSSPEQP----RPSTSKAVSPP---H 521

Query: 68  LEEKPDVKQKSSRKKVVVPQII-----ITRASNETLVSCSSSGSDQQRTIREP 115
           L+  P  +      +V +P           A    +V  SS  SD + +  EP
Sbjct: 522 LDGPPSPRSPVIGSEVFLPNSNHVASGAGEAEERVVVISSSEDSDAENSCMEP 574


>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
           sapiens]
          Length = 699

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 12/108 (11%)

Query: 13  EEQKKGSTYSV-------PKSKEKLMEKHSQEARQADRESEKPVDSLHPGAGTAKHPPPA 65
           EE+KK  T +V       P   +K  E  S  +   D +S +  ++    AGT K+    
Sbjct: 334 EEEKKPPTKAVVSKATTKPPPAKKAAESSSDSS---DSDSSEDDEAPSKPAGTTKNSSNK 390

Query: 66  ASLEEK-PDVKQKSSRKKVVVP-QIIITRASNETLVSCSSSGSDQQRT 111
            ++  K P VK  ++ K+ V   Q ++TR ++ +     SS S++++T
Sbjct: 391 PAVTTKSPAVKPAAAPKQPVGGGQKLLTRKADSSSSEEESSSSEEEKT 438


>gi|21361657 protein disulfide-isomerase A3 precursor [Homo sapiens]
          Length = 505

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 4/69 (5%)

Query: 72  PDVKQKSSRKKVVVPQIIITRASN-ETLVSCSSSGSDQQRTIREPEDWGPYRRHRNPSTA 130
           P+ +  ++R K +VP   +   +N  T      SG    +  R+ E+ G Y     P TA
Sbjct: 65  PEYEAAATRLKGIVPLAKVDCTANTNTCNKYGVSGYPTLKIFRDGEEAGAYD---GPRTA 121

Query: 131 DAYNSHLKE 139
           D   SHLK+
Sbjct: 122 DGIVSHLKK 130


>gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens]
          Length = 1512

 Score = 28.5 bits (62), Expect = 1.8
 Identities = 32/137 (23%), Positives = 54/137 (39%), Gaps = 14/137 (10%)

Query: 4   HAAGARTFCEEQKKGSTYSVPKSKEKLMEKHSQEARQADRESE----KPVDSLHPGAGTA 59
           H+       E  K GS+ S    ++      S  + + DR+S+    +   S  P +  A
Sbjct: 235 HSHSGEERAEVAKSGSSSSSGGRRKSASATSSSSSSRKDRDSKAHRSRTKSSKEPPS--A 292

Query: 60  KHPPPAASLEEKPDVKQKSSRKKVVV----PQIIITRASNETLVSCSS----SGSDQQRT 111
              PP A  E+K + K    R+ +          ++  ++++L S  S     G     +
Sbjct: 293 YKEPPKAYREDKTEPKAYRRRRSLSPLGGRDDSPVSHRASQSLRSRKSPSPAGGGSSPYS 352

Query: 112 IREPEDWGPYRRHRNPS 128
            R P    PY R R+PS
Sbjct: 353 RRLPRSPSPYSRRRSPS 369


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.306    0.121    0.344 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,368,716
Number of Sequences: 37866
Number of extensions: 281967
Number of successful extensions: 1653
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 99
Number of HSP's that attempted gapping in prelim test: 1571
Number of HSP's gapped (non-prelim): 170
length of query: 139
length of database: 18,247,518
effective HSP length: 92
effective length of query: 47
effective length of database: 14,763,846
effective search space: 693900762
effective search space used: 693900762
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.