Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 23110955
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|23110955 cathepsin H isoform a preproprotein [Homo sapiens]
(335 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|23110955 cathepsin H isoform a preproprotein [Homo sapiens] 717 0.0
gi|23110957 cathepsin H isoform b precursor [Homo sapiens] 682 0.0
gi|22202619 cathepsin L1 preproprotein [Homo sapiens] 229 3e-60
gi|4503155 cathepsin L1 preproprotein [Homo sapiens] 229 3e-60
gi|23110960 cathepsin L2 preproprotein [Homo sapiens] 229 3e-60
gi|4503151 cathepsin K preproprotein [Homo sapiens] 227 1e-59
gi|23110962 cathepsin S preproprotein [Homo sapiens] 202 3e-52
gi|6042196 cathepsin F [Homo sapiens] 184 1e-46
gi|23110964 cathepsin W preproprotein [Homo sapiens] 153 2e-37
gi|189083844 cathepsin C isoform a preproprotein [Homo sapiens] 148 8e-36
gi|4557501 cathepsin O preproprotein [Homo sapiens] 147 2e-35
gi|22538437 cathepsin B preproprotein [Homo sapiens] 112 6e-25
gi|22538435 cathepsin B preproprotein [Homo sapiens] 112 6e-25
gi|22538433 cathepsin B preproprotein [Homo sapiens] 112 6e-25
gi|22538431 cathepsin B preproprotein [Homo sapiens] 112 6e-25
gi|4503139 cathepsin B preproprotein [Homo sapiens] 112 6e-25
gi|22538442 cathepsin Z preproprotein [Homo sapiens] 93 3e-19
gi|11545918 tubulointerstitial nephritis antigen-like 1 [Homo sa... 89 7e-18
gi|224586907 tubulointerstitial nephritis antigen [Homo sapiens] 84 2e-16
gi|239744067 PREDICTED: similar to Putative cathepsin L-like pro... 45 7e-05
gi|110815834 F-box and WD-40 domain protein 10 [Homo sapiens] 32 1.0
gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo s... 31 1.8
gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo sa... 31 1.8
gi|239756740 PREDICTED: similar to CMT1A duplicated region trans... 30 2.3
gi|205360934 fibronectin type III domain containing 3B [Homo sap... 30 2.3
gi|205360932 fibronectin type III domain containing 3B [Homo sap... 30 2.3
gi|12746412 ankyrin repeat, family A (RFXANK-like), 2 [Homo sapi... 29 6.8
gi|124286830 zinc finger protein 618 [Homo sapiens] 28 8.8
>gi|23110955 cathepsin H isoform a preproprotein [Homo sapiens]
Length = 335
Score = 717 bits (1851), Expect = 0.0
Identities = 335/335 (100%), Positives = 335/335 (100%)
Query: 1 MWATLPLLCAGAWLLGVPVCGAAELCVNSLEKFHFKSWMSKHRKTYSTEEYHHRLQTFAS 60
MWATLPLLCAGAWLLGVPVCGAAELCVNSLEKFHFKSWMSKHRKTYSTEEYHHRLQTFAS
Sbjct: 1 MWATLPLLCAGAWLLGVPVCGAAELCVNSLEKFHFKSWMSKHRKTYSTEEYHHRLQTFAS 60
Query: 61 NWRKINAHNNGNHTFKMALNQFSDMSFAEIKHKYLWSEPQNCSATKSNYLRGTGPYPPSV 120
NWRKINAHNNGNHTFKMALNQFSDMSFAEIKHKYLWSEPQNCSATKSNYLRGTGPYPPSV
Sbjct: 61 NWRKINAHNNGNHTFKMALNQFSDMSFAEIKHKYLWSEPQNCSATKSNYLRGTGPYPPSV 120
Query: 121 DWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHG 180
DWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHG
Sbjct: 121 DWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHG 180
Query: 181 CQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGYCKFQPGKAIGFVKDVANITIYDEEAMV 240
CQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGYCKFQPGKAIGFVKDVANITIYDEEAMV
Sbjct: 181 CQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGYCKFQPGKAIGFVKDVANITIYDEEAMV 240
Query: 241 EAVALYNPVSFAFEVTQDFMMYRTGIYSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIVK 300
EAVALYNPVSFAFEVTQDFMMYRTGIYSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIVK
Sbjct: 241 EAVALYNPVSFAFEVTQDFMMYRTGIYSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIVK 300
Query: 301 NSWGPQWGMNGYFLIERGKNMCGLAACASYPIPLV 335
NSWGPQWGMNGYFLIERGKNMCGLAACASYPIPLV
Sbjct: 301 NSWGPQWGMNGYFLIERGKNMCGLAACASYPIPLV 335
>gi|23110957 cathepsin H isoform b precursor [Homo sapiens]
Length = 323
Score = 682 bits (1759), Expect = 0.0
Identities = 323/335 (96%), Positives = 323/335 (96%), Gaps = 12/335 (3%)
Query: 1 MWATLPLLCAGAWLLGVPVCGAAELCVNSLEKFHFKSWMSKHRKTYSTEEYHHRLQTFAS 60
MWATLPLLCA AELCVNSLEKFHFKSWMSKHRKTYSTEEYHHRLQTFAS
Sbjct: 1 MWATLPLLCA------------AELCVNSLEKFHFKSWMSKHRKTYSTEEYHHRLQTFAS 48
Query: 61 NWRKINAHNNGNHTFKMALNQFSDMSFAEIKHKYLWSEPQNCSATKSNYLRGTGPYPPSV 120
NWRKINAHNNGNHTFKMALNQFSDMSFAEIKHKYLWSEPQNCSATKSNYLRGTGPYPPSV
Sbjct: 49 NWRKINAHNNGNHTFKMALNQFSDMSFAEIKHKYLWSEPQNCSATKSNYLRGTGPYPPSV 108
Query: 121 DWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHG 180
DWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHG
Sbjct: 109 DWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHG 168
Query: 181 CQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGYCKFQPGKAIGFVKDVANITIYDEEAMV 240
CQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGYCKFQPGKAIGFVKDVANITIYDEEAMV
Sbjct: 169 CQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGYCKFQPGKAIGFVKDVANITIYDEEAMV 228
Query: 241 EAVALYNPVSFAFEVTQDFMMYRTGIYSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIVK 300
EAVALYNPVSFAFEVTQDFMMYRTGIYSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIVK
Sbjct: 229 EAVALYNPVSFAFEVTQDFMMYRTGIYSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIVK 288
Query: 301 NSWGPQWGMNGYFLIERGKNMCGLAACASYPIPLV 335
NSWGPQWGMNGYFLIERGKNMCGLAACASYPIPLV
Sbjct: 289 NSWGPQWGMNGYFLIERGKNMCGLAACASYPIPLV 323
>gi|22202619 cathepsin L1 preproprotein [Homo sapiens]
Length = 333
Score = 229 bits (583), Expect = 3e-60
Identities = 130/339 (38%), Positives = 188/339 (55%), Gaps = 23/339 (6%)
Query: 6 PLLCAGAWLLGVPVCGAAELCVNSLEKFHFKSWMSKHRKTYSTEEYHHRLQTFASNWRKI 65
P L A+ LG+ +A L + + + W + H + Y E R + N + I
Sbjct: 3 PTLILAAFCLGI---ASATLTFDHSLEAQWTKWKAMHNRLYGMNEEGWRRAVWEKNMKMI 59
Query: 66 NAHNN----GNHTFKMALNQFSDMSFAEIKHKYLWSEPQNCSATKSNYLRGTGPY--PPS 119
HN G H+F MA+N F DM+ E + + + QN K + Y P S
Sbjct: 60 ELHNQEYREGKHSFTMAMNAFGDMTSEEFRQ--VMNGFQNRKPRKGKVFQEPLFYEAPRS 117
Query: 120 VDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNH 179
VDWR+KG +V+PVKNQG CGSCW FS TGALE + TG+++SL+EQ LVDC+ N
Sbjct: 118 VDWREKG-YVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNE 176
Query: 180 GCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGYCKFQPGKAIGFVKDVANITI-YDEEA 238
GC GGL AF+Y+ N G+ E++YPY+ + CK+ P ++ D + I E+A
Sbjct: 177 GCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSV--ANDTGFVDIPKQEKA 234
Query: 239 MVEAVALYNPVSFAFEV-TQDFMMYRTGIYSSTSCHKTPDKVNHAVLAVGYG----EKNG 293
+++AVA P+S A + + F+ Y+ GIY C + + ++H VL VGYG E +
Sbjct: 235 LMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDC--SSEDMDHGVLVVGYGFESTESDN 292
Query: 294 IPYWIVKNSWGPQWGMNGYFLIERG-KNMCGLAACASYP 331
YW+VKNSWG +WGM GY + + +N CG+A+ ASYP
Sbjct: 293 NKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYP 331
>gi|4503155 cathepsin L1 preproprotein [Homo sapiens]
Length = 333
Score = 229 bits (583), Expect = 3e-60
Identities = 130/339 (38%), Positives = 188/339 (55%), Gaps = 23/339 (6%)
Query: 6 PLLCAGAWLLGVPVCGAAELCVNSLEKFHFKSWMSKHRKTYSTEEYHHRLQTFASNWRKI 65
P L A+ LG+ +A L + + + W + H + Y E R + N + I
Sbjct: 3 PTLILAAFCLGI---ASATLTFDHSLEAQWTKWKAMHNRLYGMNEEGWRRAVWEKNMKMI 59
Query: 66 NAHNN----GNHTFKMALNQFSDMSFAEIKHKYLWSEPQNCSATKSNYLRGTGPY--PPS 119
HN G H+F MA+N F DM+ E + + + QN K + Y P S
Sbjct: 60 ELHNQEYREGKHSFTMAMNAFGDMTSEEFRQ--VMNGFQNRKPRKGKVFQEPLFYEAPRS 117
Query: 120 VDWRKKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNH 179
VDWR+KG +V+PVKNQG CGSCW FS TGALE + TG+++SL+EQ LVDC+ N
Sbjct: 118 VDWREKG-YVTPVKNQGQCGSCWAFSATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNE 176
Query: 180 GCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGYCKFQPGKAIGFVKDVANITI-YDEEA 238
GC GGL AF+Y+ N G+ E++YPY+ + CK+ P ++ D + I E+A
Sbjct: 177 GCNGGLMDYAFQYVQDNGGLDSEESYPYEATEESCKYNPKYSV--ANDTGFVDIPKQEKA 234
Query: 239 MVEAVALYNPVSFAFEV-TQDFMMYRTGIYSSTSCHKTPDKVNHAVLAVGYG----EKNG 293
+++AVA P+S A + + F+ Y+ GIY C + + ++H VL VGYG E +
Sbjct: 235 LMKAVATVGPISVAIDAGHESFLFYKEGIYFEPDC--SSEDMDHGVLVVGYGFESTESDN 292
Query: 294 IPYWIVKNSWGPQWGMNGYFLIERG-KNMCGLAACASYP 331
YW+VKNSWG +WGM GY + + +N CG+A+ ASYP
Sbjct: 293 NKYWLVKNSWGEEWGMGGYVKMAKDRRNHCGIASAASYP 331
>gi|23110960 cathepsin L2 preproprotein [Homo sapiens]
Length = 334
Score = 229 bits (583), Expect = 3e-60
Identities = 124/304 (40%), Positives = 166/304 (54%), Gaps = 13/304 (4%)
Query: 38 WMSKHRKTYSTEEYHHRLQTFASNWRKINAHNN----GNHTFKMALNQFSDMSFAEIKHK 93
W + HR+ Y E R + N + I HN G H F MA+N F DM+ E +
Sbjct: 32 WKATHRRLYGANEEGWRRAVWEKNMKMIELHNGEYSQGKHGFTMAMNAFGDMTNEEFRQM 91
Query: 94 YLWSEPQNCSATKSNYLRGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGALESA 153
Q K P SVDWRKKG +V+PVKNQ CGSCW FS TGALE
Sbjct: 92 MGCFRNQKFRKGKVFREPLFLDLPKSVDWRKKG-YVTPVKNQKQCGSCWAFSATGALEGQ 150
Query: 154 IAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGY 213
+ TGK++SL+EQ LVDC++ N GC GG ++AF+Y+ N G+ E++YPY D
Sbjct: 151 MFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGFMARAFQYVKENGGLDSEESYPYVAVDEI 210
Query: 214 CKFQPGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEV-TQDFMMYRTGIYSSTSC 272
CK++P ++ + E+A+++AVA P+S A + F Y++GIY C
Sbjct: 211 CKYRPENSVANDTGFTVVAPGKEKALMKAVATVGPISVAMDAGHSSFQFYKSGIYFEPDC 270
Query: 273 HKTPDKVNHAVLAVGYG----EKNGIPYWIVKNSWGPQWGMNGYFLIERGK-NMCGLAAC 327
+ ++H VL VGYG N YW+VKNSWGP+WG NGY I + K N CG+A
Sbjct: 271 --SSKNLDHGVLVVGYGFEGANSNNSKYWLVKNSWGPEWGSNGYVKIAKDKNNHCGIATA 328
Query: 328 ASYP 331
ASYP
Sbjct: 329 ASYP 332
>gi|4503151 cathepsin K preproprotein [Homo sapiens]
Length = 329
Score = 227 bits (579), Expect = 1e-59
Identities = 128/309 (41%), Positives = 176/309 (56%), Gaps = 17/309 (5%)
Query: 34 HFKSWMSKHRKTYST--EEYHHRLQTFASNWRKINAHNN----GNHTFKMALNQFSDMSF 87
H++ W HRK Y+ +E RL + N + I+ HN G HT+++A+N DM+
Sbjct: 25 HWELWKKTHRKQYNNKVDEISRRL-IWEKNLKYISIHNLEASLGVHTYELAMNHLGDMTS 83
Query: 88 AEIKHKYLWSEPQNCSATKSNYL---RGTGPYPPSVDWRKKGNFVSPVKNQGACGSCWTF 144
E+ K + + ++ L G P SVD+RKKG +V+PVKNQG CGSCW F
Sbjct: 84 EEVVQKMTGLKVPLSHSRSNDTLYIPEWEGRAPDSVDYRKKG-YVTPVKNQGQCGSCWAF 142
Query: 145 STTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGEDT 204
S+ GALE + TGK+L+L+ Q LVDC + N GC GG + AF+Y+ N+GI ED
Sbjct: 143 SSVGALEGQLKKKTGKLLNLSPQNLVDCVSE--NDGCGGGYMTNAFQYVQKNRGIDSEDA 200
Query: 205 YPYQGKDGYCKFQPGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEVT-QDFMMYR 263
YPY G++ C + P + I +E+A+ AVA PVS A + + F Y
Sbjct: 201 YPYVGQEESCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQFYS 260
Query: 264 TGIYSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGK-NMC 322
G+Y SC+ D +NHAVLAVGYG + G +WI+KNSWG WG GY L+ R K N C
Sbjct: 261 KGVYYDESCNS--DNLNHAVLAVGYGIQKGNKHWIIKNSWGENWGNKGYILMARNKNNAC 318
Query: 323 GLAACASYP 331
G+A AS+P
Sbjct: 319 GIANLASFP 327
>gi|23110962 cathepsin S preproprotein [Homo sapiens]
Length = 331
Score = 202 bits (515), Expect = 3e-52
Identities = 119/310 (38%), Positives = 167/310 (53%), Gaps = 19/310 (6%)
Query: 34 HFKSWMSKHRKTYS--TEEYHHRLQTFASNWRKINAHN----NGNHTFKMALNQFSDMSF 87
H+ W + K Y EE RL + N + + HN G H++ + +N DM+
Sbjct: 27 HWHLWKKTYGKQYKEKNEEAVRRL-IWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTS 85
Query: 88 AEIKHKYLWSEPQNCSATKSNYLRGTGP---YPPSVDWRKKGNFVSPVKNQGACGSCWTF 144
E+ L S + S + N + P P SVDWR+KG V+ VK QG+CG+CW F
Sbjct: 86 EEVMS--LMSSLRVPSQWQRNITYKSNPNRILPDSVDWREKG-CVTEVKYQGSCGACWAF 142
Query: 145 STTGALESAIAIATGKMLSLAEQQLVDCA-QDFNNHGCQGGLPSQAFEYILYNKGIMGED 203
S GALE+ + + TGK++SL+ Q LVDC+ + + N GC GG + AF+YI+ NKGI +
Sbjct: 143 SAVGALEAQLKLKTGKLVSLSAQNLVDCSTEKYGNKGCNGGFMTTAFQYIIDNKGIDSDA 202
Query: 204 TYPYQGKDGYCKFQPGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEVTQ-DFMMY 262
+YPY+ D C++ + E+ + EAVA PVS + F +Y
Sbjct: 203 SYPYKAMDQKCQYDSKYRAATCSKYTELPYGREDVLKEAVANKGPVSVGVDARHPSFFLY 262
Query: 263 RTGIYSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGK-NM 321
R+G+Y SC VNH VL VGYG+ NG YW+VKNSWG +G GY + R K N
Sbjct: 263 RSGVYYEPSC---TQNVNHGVLVVGYGDLNGKEYWLVKNSWGHNFGEEGYIRMARNKGNH 319
Query: 322 CGLAACASYP 331
CG+A+ SYP
Sbjct: 320 CGIASFPSYP 329
>gi|6042196 cathepsin F [Homo sapiens]
Length = 484
Score = 184 bits (467), Expect = 1e-46
Identities = 111/300 (37%), Positives = 159/300 (53%), Gaps = 12/300 (4%)
Query: 35 FKSWMSKHRKTY-STEEYHHRLQTFASNW---RKINAHNNGNHTFKMALNQFSDMSFAEI 90
FK+++ + +TY S EE RL F +N +KI A + G T + + +FSD++ E
Sbjct: 187 FKNFVITYNRTYESKEEARWRLSVFVNNMVRAQKIQALDRG--TAQYGVTKFSDLTEEEF 244
Query: 91 KHKYLWSEPQNCSATKSNYLRGTGPY-PPSVDWRKKGNFVSPVKNQGACGSCWTFSTTGA 149
+ YL + + K + G PP DWR KG V+ VK+QG CGSCW FS TG
Sbjct: 245 RTIYLNTLLRKEPGNKMKQAKSVGDLAPPEWDWRSKGA-VTKVKDQGMCGSCWAFSVTGN 303
Query: 150 LESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQG 209
+E + G +LSL+EQ+L+DC D + C GGLPS A+ I G+ ED Y YQG
Sbjct: 304 VEGQWFLNQGTLLSLSEQELLDC--DKMDKACMGGLPSNAYSAIKNLGGLETEDDYSYQG 361
Query: 210 KDGYCKFQPGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYRTGIYSS 269
C F KA ++ D ++ +E+ + +A P+S A YR GI
Sbjct: 362 HMQSCNFSAEKAKVYINDSVELS-QNEQKLAAWLAKRGPISVAINAF-GMQFYRHGISRP 419
Query: 270 TSCHKTPDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACAS 329
+P ++HAVL VGYG ++ +P+W +KNSWG WG GY+ + RG CG+ AS
Sbjct: 420 LRPLCSPWLIDHAVLLVGYGNRSDVPFWAIKNSWGTDWGEKGYYYLHRGSGACGVNTMAS 479
>gi|23110964 cathepsin W preproprotein [Homo sapiens]
Length = 376
Score = 153 bits (386), Expect = 2e-37
Identities = 97/319 (30%), Positives = 153/319 (47%), Gaps = 35/319 (10%)
Query: 35 FKSWMSKHRKTY-STEEYHHRLQTFASNW---RKINAHNNGNHTFKMALNQFSDMSFAEI 90
FK + + ++Y S EE+ HRL FA N +++ + G T + + FSD++ E
Sbjct: 42 FKLFQIQFNRSYLSPEEHAHRLDIFAHNLAQAQRLQEEDLG--TAEFGVTPFSDLTEEEF 99
Query: 91 KHKYLWSEPQNCSATKSNYLRGTGP---YPPSVDWRKKGNFVSPVKNQGACGSCWTFSTT 147
Y + + +R P P S DWRK +SP+K+Q C CW +
Sbjct: 100 GQLYGYRRAAGGVPSMGREIRSEEPEESVPFSCDWRKVAGAISPIKDQKNCNCCWAMAAA 159
Query: 148 GALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPY 207
G +E+ I+ + ++ Q+L+DC + GC GG AF +L N G+ E YP+
Sbjct: 160 GNIETLWRISFWDFVDVSVQELLDCGRC--GDGCHGGFVWDAFITVLNNSGLASEKDYPF 217
Query: 208 QGKDGYCKFQPGK--AIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYRTG 265
QGK + P K + +++D + +E + + +A Y P++ + + +YR G
Sbjct: 218 QGKVRAHRCHPKKYQKVAWIQDFIMLQ-NNEHRIAQYLATYGPITVTINM-KPLQLYRKG 275
Query: 266 IYSSTSCHKTPDKVNHAVLAVGYGE---KNGI-----------------PYWIVKNSWGP 305
+ +T P V+H+VL VG+G + GI PYWI+KNSWG
Sbjct: 276 VIKATPTTCDPQLVDHSVLLVGFGSVKSEEGIWAETVSSQSQPQPPHPTPYWILKNSWGA 335
Query: 306 QWGMNGYFLIERGKNMCGL 324
QWG GYF + RG N CG+
Sbjct: 336 QWGEKGYFRLHRGSNTCGI 354
>gi|189083844 cathepsin C isoform a preproprotein [Homo sapiens]
Length = 463
Score = 148 bits (373), Expect = 8e-36
Identities = 91/232 (39%), Positives = 126/232 (54%), Gaps = 17/232 (7%)
Query: 117 PPSVDWRKKG--NFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLS--LAEQQLVDC 172
P S DWR NFVSPV+NQ +CGSC++F++ G LE+ I I T + L+ Q++V C
Sbjct: 232 PTSWDWRNVHGINFVSPVRNQASCGSCYSFASMGMLEARIRILTNNSQTPILSPQEVVSC 291
Query: 173 AQDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGYCKFQPGKAIGFVKDVANIT 232
+Q GC+GG P + G++ E +PY G D CK + + + +
Sbjct: 292 SQ--YAQGCEGGFPYLIAGKYAQDFGLVEEACFPYTGTDSPCKMKEDCFRYYSSEYHYVG 349
Query: 233 IY----DEEAMVEAVALYNPVSFAFEVTQDFMMYRTGIYSSTSCHK--TP-DKVNHAVLA 285
+ +E M + + P++ AFEV DF+ Y+ GIY T P + NHAVL
Sbjct: 350 GFYGGCNEALMKLELVHHGPMAVAFEVYDDFLHYKKGIYHHTGLRDPFNPFELTNHAVLL 409
Query: 286 VGYG--EKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGL--AACASYPIP 333
VGYG +G+ YWIVKNSWG WG NGYF I RG + C + A A+ PIP
Sbjct: 410 VGYGTDSASGMDYWIVKNSWGTGWGENGYFRIRRGTDECAIESIAVAATPIP 461
>gi|4557501 cathepsin O preproprotein [Homo sapiens]
Length = 321
Score = 147 bits (370), Expect = 2e-35
Identities = 90/267 (33%), Positives = 134/267 (50%), Gaps = 20/267 (7%)
Query: 72 NHTFKMALNQFSDMSFAEIKHKYLWSEPQNCSATKSNYLRGTG--PYPPSVDWRKKGNFV 129
N T +NQFS + E K YL S+P + P DWR K V
Sbjct: 62 NSTAFYGINQFSYLFPEEFKAIYLRSKPSKFPRYSAEVHMSIPNVSLPLRFDWRDK-QVV 120
Query: 130 SPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLPSQA 189
+ V+NQ CG CW FS GA+ESA AI + L+ QQ++DC+ +NN+GC GG A
Sbjct: 121 TQVRNQQMCGGCWAFSVVGAVESAYAIKGKPLEDLSVQQVIDCS--YNNYGCNGGSTLNA 178
Query: 190 FEYILYNK---GIMGEDTYPYQGKDGYCKFQPGKAIGFVKDVANITIYD----EEAMVEA 242
++ NK ++ + YP++ ++G C + G GF + + YD E+ M +A
Sbjct: 179 LNWL--NKMQVKLVKDSEYPFKAQNGLCHYFSGSHSGF--SIKGYSAYDFSDQEDEMAKA 234
Query: 243 VALYNPVSFAFEVTQDFMMYRTGIYSSTSCHKTPDKVNHAVLAVGYGEKNGIPYWIVKNS 302
+ + P+ + + Y GI H + + NHAVL G+ + PYWIV+NS
Sbjct: 235 LLTFGPLVVIVDAVS-WQDYLGGIIQH---HCSSGEANHAVLITGFDKTGSTPYWIVRNS 290
Query: 303 WGPQWGMNGYFLIERGKNMCGLAACAS 329
WG WG++GY ++ G N+CG+A S
Sbjct: 291 WGSSWGVDGYAHVKMGSNVCGIADSVS 317
>gi|22538437 cathepsin B preproprotein [Homo sapiens]
Length = 339
Score = 112 bits (279), Expect = 6e-25
Identities = 84/300 (28%), Positives = 133/300 (44%), Gaps = 62/300 (20%)
Query: 91 KHKYLWSEPQNCSATKSNYLR---GT---GPYPP-----SVDWRKKGNF----------- 128
K W N +YL+ GT GP PP + D + +F
Sbjct: 36 KRNTTWQAGHNFYNVDMSYLKRLCGTFLGGPKPPQRVMFTEDLKLPASFDAREQWPQCPT 95
Query: 129 VSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSL--AEQQLVDCAQDFNNHGCQGGLP 186
+ +++QG+CGSCW F A+ I I T +S+ + + L+ C GC GG P
Sbjct: 96 IKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYP 155
Query: 187 SQAFEYILYNKGIMGEDTY-------PY------------------QGKDGYCK--FQPG 219
++A+ + KG++ Y PY +G C +PG
Sbjct: 156 AEAWNFWT-RKGLVSGGLYESHVGCRPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPG 214
Query: 220 KAIGFVKD----VANITIYDEEAMVEAVALYN-PVSFAFEVTQDFMMYRTGIYSSTSCHK 274
+ + +D + ++ + E + A N PV AF V DF++Y++G+Y H
Sbjct: 215 YSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQ----HV 270
Query: 275 TPDKVN-HAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYPIP 333
T + + HA+ +G+G +NG PYW+V NSW WG NG+F I RG++ CG+ + IP
Sbjct: 271 TGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIP 330
>gi|22538435 cathepsin B preproprotein [Homo sapiens]
Length = 339
Score = 112 bits (279), Expect = 6e-25
Identities = 84/300 (28%), Positives = 133/300 (44%), Gaps = 62/300 (20%)
Query: 91 KHKYLWSEPQNCSATKSNYLR---GT---GPYPP-----SVDWRKKGNF----------- 128
K W N +YL+ GT GP PP + D + +F
Sbjct: 36 KRNTTWQAGHNFYNVDMSYLKRLCGTFLGGPKPPQRVMFTEDLKLPASFDAREQWPQCPT 95
Query: 129 VSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSL--AEQQLVDCAQDFNNHGCQGGLP 186
+ +++QG+CGSCW F A+ I I T +S+ + + L+ C GC GG P
Sbjct: 96 IKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYP 155
Query: 187 SQAFEYILYNKGIMGEDTY-------PY------------------QGKDGYCK--FQPG 219
++A+ + KG++ Y PY +G C +PG
Sbjct: 156 AEAWNFWT-RKGLVSGGLYESHVGCRPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPG 214
Query: 220 KAIGFVKD----VANITIYDEEAMVEAVALYN-PVSFAFEVTQDFMMYRTGIYSSTSCHK 274
+ + +D + ++ + E + A N PV AF V DF++Y++G+Y H
Sbjct: 215 YSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQ----HV 270
Query: 275 TPDKVN-HAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYPIP 333
T + + HA+ +G+G +NG PYW+V NSW WG NG+F I RG++ CG+ + IP
Sbjct: 271 TGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIP 330
>gi|22538433 cathepsin B preproprotein [Homo sapiens]
Length = 339
Score = 112 bits (279), Expect = 6e-25
Identities = 84/300 (28%), Positives = 133/300 (44%), Gaps = 62/300 (20%)
Query: 91 KHKYLWSEPQNCSATKSNYLR---GT---GPYPP-----SVDWRKKGNF----------- 128
K W N +YL+ GT GP PP + D + +F
Sbjct: 36 KRNTTWQAGHNFYNVDMSYLKRLCGTFLGGPKPPQRVMFTEDLKLPASFDAREQWPQCPT 95
Query: 129 VSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSL--AEQQLVDCAQDFNNHGCQGGLP 186
+ +++QG+CGSCW F A+ I I T +S+ + + L+ C GC GG P
Sbjct: 96 IKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYP 155
Query: 187 SQAFEYILYNKGIMGEDTY-------PY------------------QGKDGYCK--FQPG 219
++A+ + KG++ Y PY +G C +PG
Sbjct: 156 AEAWNFWT-RKGLVSGGLYESHVGCRPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPG 214
Query: 220 KAIGFVKD----VANITIYDEEAMVEAVALYN-PVSFAFEVTQDFMMYRTGIYSSTSCHK 274
+ + +D + ++ + E + A N PV AF V DF++Y++G+Y H
Sbjct: 215 YSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQ----HV 270
Query: 275 TPDKVN-HAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYPIP 333
T + + HA+ +G+G +NG PYW+V NSW WG NG+F I RG++ CG+ + IP
Sbjct: 271 TGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIP 330
>gi|22538431 cathepsin B preproprotein [Homo sapiens]
Length = 339
Score = 112 bits (279), Expect = 6e-25
Identities = 84/300 (28%), Positives = 133/300 (44%), Gaps = 62/300 (20%)
Query: 91 KHKYLWSEPQNCSATKSNYLR---GT---GPYPP-----SVDWRKKGNF----------- 128
K W N +YL+ GT GP PP + D + +F
Sbjct: 36 KRNTTWQAGHNFYNVDMSYLKRLCGTFLGGPKPPQRVMFTEDLKLPASFDAREQWPQCPT 95
Query: 129 VSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSL--AEQQLVDCAQDFNNHGCQGGLP 186
+ +++QG+CGSCW F A+ I I T +S+ + + L+ C GC GG P
Sbjct: 96 IKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYP 155
Query: 187 SQAFEYILYNKGIMGEDTY-------PY------------------QGKDGYCK--FQPG 219
++A+ + KG++ Y PY +G C +PG
Sbjct: 156 AEAWNFWT-RKGLVSGGLYESHVGCRPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPG 214
Query: 220 KAIGFVKD----VANITIYDEEAMVEAVALYN-PVSFAFEVTQDFMMYRTGIYSSTSCHK 274
+ + +D + ++ + E + A N PV AF V DF++Y++G+Y H
Sbjct: 215 YSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQ----HV 270
Query: 275 TPDKVN-HAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYPIP 333
T + + HA+ +G+G +NG PYW+V NSW WG NG+F I RG++ CG+ + IP
Sbjct: 271 TGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIP 330
>gi|4503139 cathepsin B preproprotein [Homo sapiens]
Length = 339
Score = 112 bits (279), Expect = 6e-25
Identities = 84/300 (28%), Positives = 133/300 (44%), Gaps = 62/300 (20%)
Query: 91 KHKYLWSEPQNCSATKSNYLR---GT---GPYPP-----SVDWRKKGNF----------- 128
K W N +YL+ GT GP PP + D + +F
Sbjct: 36 KRNTTWQAGHNFYNVDMSYLKRLCGTFLGGPKPPQRVMFTEDLKLPASFDAREQWPQCPT 95
Query: 129 VSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSL--AEQQLVDCAQDFNNHGCQGGLP 186
+ +++QG+CGSCW F A+ I I T +S+ + + L+ C GC GG P
Sbjct: 96 IKEIRDQGSCGSCWAFGAVEAISDRICIHTNAHVSVEVSAEDLLTCCGSMCGDGCNGGYP 155
Query: 187 SQAFEYILYNKGIMGEDTY-------PY------------------QGKDGYCK--FQPG 219
++A+ + KG++ Y PY +G C +PG
Sbjct: 156 AEAWNFWT-RKGLVSGGLYESHVGCRPYSIPPCEHHVNGSRPPCTGEGDTPKCSKICEPG 214
Query: 220 KAIGFVKD----VANITIYDEEAMVEAVALYN-PVSFAFEVTQDFMMYRTGIYSSTSCHK 274
+ + +D + ++ + E + A N PV AF V DF++Y++G+Y H
Sbjct: 215 YSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKNGPVEGAFSVYSDFLLYKSGVYQ----HV 270
Query: 275 TPDKVN-HAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLIERGKNMCGLAACASYPIP 333
T + + HA+ +G+G +NG PYW+V NSW WG NG+F I RG++ CG+ + IP
Sbjct: 271 TGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGDNGFFKILRGQDHCGIESEVVAGIP 330
>gi|22538442 cathepsin Z preproprotein [Homo sapiens]
Length = 303
Score = 93.2 bits (230), Expect = 3e-19
Identities = 67/220 (30%), Positives = 95/220 (43%), Gaps = 28/220 (12%)
Query: 117 PPSVDWRKKG--NFVSPVKNQGA---CGSCWTFSTTGALESAIAI---ATGKMLSLAEQQ 168
P S DWR N+ S +NQ CGSCW ++T A+ I I L+ Q
Sbjct: 63 PKSWDWRNVDGVNYASITRNQHIPQYCGSCWAHASTSAMADRINIKRKGAWPSTLLSVQN 122
Query: 169 LVDCAQDFNNHGCQGGLPSQAFEYILYNKGIMGEDTYPYQGKDGYC-KFQPGKAIGFVKD 227
++DC N C+GG ++Y + GI E YQ KD C KF K+
Sbjct: 123 VIDCG---NAGSCEGGNDLSVWDYA-HQHGIPDETCNNYQAKDQECDKFNQCGTCNEFKE 178
Query: 228 ---VANITIY---------DEEAMVEAVALYNPVSFAFEVTQDFMMYRTGIYSSTSCHKT 275
+ N T++ E M+ + P+S T+ Y GIY+ ++
Sbjct: 179 CHAIRNYTLWRVGDYGSLSGREKMMAEIYANGPISCGIMATERLANYTGGIYAE---YQD 235
Query: 276 PDKVNHAVLAVGYGEKNGIPYWIVKNSWGPQWGMNGYFLI 315
+NH V G+G +G YWIV+NSWG WG G+ I
Sbjct: 236 TTYINHVVSVAGWGISDGTEYWIVRNSWGEPWGERGWLRI 275
>gi|11545918 tubulointerstitial nephritis antigen-like 1 [Homo
sapiens]
Length = 467
Score = 88.6 bits (218), Expect = 7e-18
Identities = 67/237 (28%), Positives = 100/237 (42%), Gaps = 42/237 (17%)
Query: 127 NFVSPVKNQGACGSCWTFSTTGALESAIAI-ATGKMLS-LAEQQLVDCAQDFNNHGCQGG 184
N + +QG C W FST ++I + G M L+ Q L+ C GC+GG
Sbjct: 215 NLIHEPLDQGNCAGSWAFSTAAVASDRVSIHSLGHMTPVLSPQNLLSC-DTHQQQGCRGG 273
Query: 185 LPSQAFEYILYNKGIMGEDTYPYQGKD-------------------------GYC--KFQ 217
A+ + L +G++ + YP+ G++ +C +
Sbjct: 274 RLDGAW-WFLRRRGVVSDHCYPFSGRERDEAGPAPPCMMHSRAMGRGKRQATAHCPNSYV 332
Query: 218 PGKAIGFVKDVANITIYDEEAMVEAVALYNPVSFAFEVTQDFMMYRTGIYSSTSCHK-TP 276
I V V + D+E M E + PV EV +DF +Y+ GIYS T P
Sbjct: 333 NNNDIYQVTPVYRLGSNDKEIMKELME-NGPVQALMEVHEDFFLYKGGIYSHTPVSLGRP 391
Query: 277 DKVN----HAVLAVGYGEKN-----GIPYWIVKNSWGPQWGMNGYFLIERGKNMCGL 324
++ H+V G+GE+ + YW NSWGP WG G+F I RG N C +
Sbjct: 392 ERYRRHGTHSVKITGWGEETLPDGRTLKYWTAANSWGPAWGERGHFRIVRGVNECDI 448
>gi|224586907 tubulointerstitial nephritis antigen [Homo sapiens]
Length = 476
Score = 83.6 bits (205), Expect = 2e-16
Identities = 69/223 (30%), Positives = 95/223 (42%), Gaps = 39/223 (17%)
Query: 134 NQGACGSCWTFSTTGALESAIAIAT-GKMLS-LAEQQLVDCAQDFNNHGCQGGLPSQAFE 191
+Q C + W FST IAI + G+ + L+ Q L+ C N HGC G +A+
Sbjct: 236 DQKNCAASWAFSTASVAADRIAIQSKGRYTANLSPQNLISCCAK-NRHGCNSGSIDRAWW 294
Query: 192 YILYNKGIMGEDTYPY--------------QGKDGYCKFQPGKAIGFVKDVANITIY--- 234
Y L +G++ YP DG K K + +N IY
Sbjct: 295 Y-LRKRGLVSHACYPLFKDQNATNNGCAMASRSDGRGKRHATKPCPNNVEKSN-RIYQCS 352
Query: 235 -------DEEAMVEAVALYNPVSFAFEVTQDFMMYRTGIYSS-TSCHKTPDKVN----HA 282
+E +++ + PV +V +DF Y+TGIY TS +K +K HA
Sbjct: 353 PPYRVSSNETEIMKEIMQNGPVQAIMQVREDFFHYKTGIYRHVTSTNKESEKYRKLQTHA 412
Query: 283 VLAVGYGEKNGIP-----YWIVKNSWGPQWGMNGYFLIERGKN 320
V G+G G +WI NSWG WG NGYF I RG N
Sbjct: 413 VKLTGWGTLRGAQGQKEKFWIAANSWGKSWGENGYFRILRGVN 455
>gi|239744067 PREDICTED: similar to Putative cathepsin L-like
protein 6 [Homo sapiens]
Length = 81
Score = 45.4 bits (106), Expect = 7e-05
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 7/71 (9%)
Query: 68 HNNGNHTFKMALNQFSDMS---FAEIKHKYLWSEPQNCSATKSNYLRGTGPYPPSVDWRK 124
++ G H+F MA+N F DM+ F ++ + + + + +N + L P SVDWR+
Sbjct: 11 YSQGKHSFTMAMNTFGDMTTEEFRQVMNGFQYQKHRNGKQFQERLLL---EIPTSVDWRE 67
Query: 125 KGNFVSPVKNQ 135
KG +V+PVK+Q
Sbjct: 68 KG-YVTPVKDQ 77
>gi|110815834 F-box and WD-40 domain protein 10 [Homo sapiens]
Length = 1051
Score = 31.6 bits (70), Expect = 1.0
Identities = 26/114 (22%), Positives = 42/114 (36%), Gaps = 21/114 (18%)
Query: 17 VPVCGAAELCVNSLEKFHFKSW----------------MSKHRKTYSTEEYHHRLQT--- 57
+P+C E CV + + F K W + + Y + + LQT
Sbjct: 23 IPLCRKCETCVLAWKIFSTKEWFCRINDISQRRFLVGILKQLNSLYLLHYFQNILQTTQG 82
Query: 58 --FASNWRKINAHNNGNHTFKMALNQFSDMSFAEIKHKYLWSEPQNCSATKSNY 109
F N +IN K +LNQ D + + + L+ + TK+NY
Sbjct: 83 KDFIYNRSRINLSKKEGKVVKSSLNQMLDKTVEQKMKEILYWFANSTQWTKANY 136
>gi|119466532 laminin alpha 2 subunit isoform b precursor [Homo
sapiens]
Length = 3118
Score = 30.8 bits (68), Expect = 1.8
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Query: 124 KKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQG 183
+ G F KN C SC+ F TT A + + AEQ ++ + H
Sbjct: 1149 RPGKFGLDAKNPLGCSSCYCFGTTTQCSEAKGLIRTWVTLKAEQTILPLVDEALQHTTTK 1208
Query: 184 GLPSQAFEYILYNKGIMGEDTY 205
G+ Q E I+ + +M ED +
Sbjct: 1209 GIVFQHPE-IVAHMDLMREDLH 1229
>gi|28559088 laminin alpha 2 subunit isoform a precursor [Homo
sapiens]
Length = 3122
Score = 30.8 bits (68), Expect = 1.8
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
Query: 124 KKGNFVSPVKNQGACGSCWTFSTTGALESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQG 183
+ G F KN C SC+ F TT A + + AEQ ++ + H
Sbjct: 1149 RPGKFGLDAKNPLGCSSCYCFGTTTQCSEAKGLIRTWVTLKAEQTILPLVDEALQHTTTK 1208
Query: 184 GLPSQAFEYILYNKGIMGEDTY 205
G+ Q E I+ + +M ED +
Sbjct: 1209 GIVFQHPE-IVAHMDLMREDLH 1229
>gi|239756740 PREDICTED: similar to CMT1A duplicated region
transcript 1 [Homo sapiens]
Length = 433
Score = 30.4 bits (67), Expect = 2.3
Identities = 26/113 (23%), Positives = 41/113 (36%), Gaps = 21/113 (18%)
Query: 18 PVCGAAELCVNSLEKFHFKSW----------------MSKHRKTYSTEEYHHRLQT---- 57
P+C E CV + + F K W + + Y + + LQT
Sbjct: 26 PLCRKCETCVLAWKIFSTKEWFCRINDISQRRFLVGILKQLNSLYLLHYFQNILQTTQGK 85
Query: 58 -FASNWRKINAHNNGNHTFKMALNQFSDMSFAEIKHKYLWSEPQNCSATKSNY 109
F N +IN K +LNQ D + + + L+ + TK+NY
Sbjct: 86 DFIYNRSRINLSKKEGKVVKSSLNQMLDKTVEQKMKEILYWFANSTQWTKANY 138
>gi|205360934 fibronectin type III domain containing 3B [Homo sapiens]
Length = 1204
Score = 30.4 bits (67), Expect = 2.3
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 38 WMSKHRKTYSTEEYHHRLQTFASNWRKINAHNNGNHTFKM-ALNQFSDMSF----AEIKH 92
W + KT++ E+ + LQ N R I+ + +HT+K+ L +F+ SF A
Sbjct: 978 WGDSNSKTHAAEDIVYTLQLEDRNKRFISIYRGPSHTYKVQRLTEFTCYSFRIQAASEAG 1037
Query: 93 KYLWSEPQNCSATKS 107
+ +SE S TKS
Sbjct: 1038 EGPFSETYTFSTTKS 1052
>gi|205360932 fibronectin type III domain containing 3B [Homo sapiens]
Length = 1204
Score = 30.4 bits (67), Expect = 2.3
Identities = 23/75 (30%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 38 WMSKHRKTYSTEEYHHRLQTFASNWRKINAHNNGNHTFKM-ALNQFSDMSF----AEIKH 92
W + KT++ E+ + LQ N R I+ + +HT+K+ L +F+ SF A
Sbjct: 978 WGDSNSKTHAAEDIVYTLQLEDRNKRFISIYRGPSHTYKVQRLTEFTCYSFRIQAASEAG 1037
Query: 93 KYLWSEPQNCSATKS 107
+ +SE S TKS
Sbjct: 1038 EGPFSETYTFSTTKS 1052
>gi|12746412 ankyrin repeat, family A (RFXANK-like), 2 [Homo
sapiens]
Length = 313
Score = 28.9 bits (63), Expect = 6.8
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 151 ESAIAIATGKMLSLAEQQLVDCAQDFNNHGCQGGLP 186
ESA+++A K + + L+DC D N + GG P
Sbjct: 216 ESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTP 251
>gi|124286830 zinc finger protein 618 [Homo sapiens]
Length = 861
Score = 28.5 bits (62), Expect = 8.8
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 13 WLLGVPVCGAAELCVNSLEKFHFKSWMSKHRKTYSTEEYHHRLQTFASN 61
WLL VP GA CVN E ++ + K R+ S E+ ++L SN
Sbjct: 816 WLLAVPAVGARSGCVNMCE----QALLIKRRRLLSPEDM-NKLMFLKSN 859
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.134 0.440
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,972,028
Number of Sequences: 37866
Number of extensions: 603527
Number of successful extensions: 1388
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1292
Number of HSP's gapped (non-prelim): 35
length of query: 335
length of database: 18,247,518
effective HSP length: 103
effective length of query: 232
effective length of database: 14,347,320
effective search space: 3328578240
effective search space used: 3328578240
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.