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Search of human proteins with 23097242
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|23097242 nephew of atonal 3 [Homo sapiens]
(166 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|23097242 nephew of atonal 3 [Homo sapiens] 330 3e-91
gi|30039710 pancreas specific transcription factor, 1a [Homo sap... 79 1e-15
gi|98986461 neurogenic differentiation 2 [Homo sapiens] 79 2e-15
gi|153792190 neurogenic differentiation 4 [Homo sapiens] 71 5e-13
gi|27475985 neurogenic differentiation 6 [Homo sapiens] 70 6e-13
gi|121114306 neurogenic differentiation 1 [Homo sapiens] 70 8e-13
gi|4885075 atonal homolog 1 [Homo sapiens] 69 2e-12
gi|21553337 atonal homolog 7 [Homo sapiens] 64 5e-11
gi|38455396 neurogenin 1 [Homo sapiens] 61 5e-10
gi|48255909 basic helix-loop-helix transcription factor 15 [Homo... 61 5e-10
gi|239756681 PREDICTED: basic helix-loop-helix family, member a9... 58 3e-09
gi|239751178 PREDICTED: basic helix-loop-helix family, member a9... 58 3e-09
gi|239745666 PREDICTED: basic helix-loop-helix family, member a9... 58 3e-09
gi|31077092 neurogenin 2 [Homo sapiens] 58 3e-09
gi|4507741 twist [Homo sapiens] 58 4e-09
gi|17981708 twist homolog 2 [Homo sapiens] 58 4e-09
gi|68989258 neurogenin 3 [Homo sapiens] 58 4e-09
gi|116805332 musculin [Homo sapiens] 57 9e-09
gi|161484632 nescient helix loop helix 2 [Homo sapiens] 56 1e-08
gi|5031945 nescient helix loop helix 2 [Homo sapiens] 56 1e-08
gi|5031943 nescient helix loop helix 1 [Homo sapiens] 55 2e-08
gi|148922889 scleraxis homolog B [Homo sapiens] 55 3e-08
gi|186972126 scleraxis homolog A [Homo sapiens] 55 3e-08
gi|4885619 T-cell acute lymphocytic leukemia 2 [Homo sapiens] 55 4e-08
gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens] 54 6e-08
gi|239752994 PREDICTED: achaete-scute complex homolog 5 (Drosoph... 53 1e-07
gi|239747548 PREDICTED: achaete-scute complex homolog 5 (Drosoph... 53 1e-07
gi|239741422 PREDICTED: achaete-scute complex homolog 5 [Homo sa... 53 1e-07
gi|57529222 basic helix-loop-helix domain containing, class B, 4... 53 1e-07
gi|38202237 transcription factor 21 [Homo sapiens] 52 2e-07
>gi|23097242 nephew of atonal 3 [Homo sapiens]
Length = 166
Score = 330 bits (847), Expect = 3e-91
Identities = 166/166 (100%), Positives = 166/166 (100%)
Query: 1 MAAYPESCVDTTVLDFVADLSLASPRRPLLCDFAPGVSLGDPALALREGRPRRMARFEEG 60
MAAYPESCVDTTVLDFVADLSLASPRRPLLCDFAPGVSLGDPALALREGRPRRMARFEEG
Sbjct: 1 MAAYPESCVDTTVLDFVADLSLASPRRPLLCDFAPGVSLGDPALALREGRPRRMARFEEG 60
Query: 61 DPEEEECEVDQGDGEEEEEEERGRGVSLLGRPKRKRVITYAQRQAANIRERKRMFNLNEA 120
DPEEEECEVDQGDGEEEEEEERGRGVSLLGRPKRKRVITYAQRQAANIRERKRMFNLNEA
Sbjct: 61 DPEEEECEVDQGDGEEEEEEERGRGVSLLGRPKRKRVITYAQRQAANIRERKRMFNLNEA 120
Query: 121 FDQLRRKVPTFAYEKRLSRIETLRLAIVYISFMTELLESCEKKESG 166
FDQLRRKVPTFAYEKRLSRIETLRLAIVYISFMTELLESCEKKESG
Sbjct: 121 FDQLRRKVPTFAYEKRLSRIETLRLAIVYISFMTELLESCEKKESG 166
>gi|30039710 pancreas specific transcription factor, 1a [Homo
sapiens]
Length = 328
Score = 79.3 bits (194), Expect = 1e-15
Identities = 39/79 (49%), Positives = 60/79 (75%), Gaps = 4/79 (5%)
Query: 85 GVSLLGRPKRKRVITYAQ----RQAANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRI 140
G + +R+RV + A+ RQAAN+RER+RM ++N+AF+ LR +PT YEKRLS++
Sbjct: 143 GAAAAAARRRRRVRSEAELQQLRQAANVRERRRMQSINDAFEGLRSHIPTLPYEKRLSKV 202
Query: 141 ETLRLAIVYISFMTELLES 159
+TLRLAI YI+F++EL+++
Sbjct: 203 DTLRLAIGYINFLSELVQA 221
>gi|98986461 neurogenic differentiation 2 [Homo sapiens]
Length = 382
Score = 79.0 bits (193), Expect = 2e-15
Identities = 54/142 (38%), Positives = 76/142 (53%), Gaps = 11/142 (7%)
Query: 34 APGVSLGDPALALR-------EGRPRRMARFEE----GDPEEEECEVDQGDGEEEEEEER 82
APG PA A + EG +A +E G EEEE E ++G E E E +
Sbjct: 43 APGPGAPGPARAAKPVPLRGEEGTEATLAEVKEEGELGGEEEEEEEEEEGLDEAEGERPK 102
Query: 83 GRGVSLLGRPKRKRVITYAQRQAANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIET 142
RG K + + +RQ AN RER RM +LN A D LR+ VP ++ ++LS+IET
Sbjct: 103 KRGPKKRKMTKARLERSKLRRQKANARERNRMHDLNAALDNLRKVVPCYSKTQKLSKIET 162
Query: 143 LRLAIVYISFMTELLESCEKKE 164
LRLA YI ++E+L S ++ +
Sbjct: 163 LRLAKNYIWALSEILRSGKRPD 184
>gi|153792190 neurogenic differentiation 4 [Homo sapiens]
Length = 331
Score = 70.9 bits (172), Expect = 5e-13
Identities = 44/96 (45%), Positives = 60/96 (62%), Gaps = 7/96 (7%)
Query: 75 EEEEEEERGRGVSLLGRPKRKRVITY------AQRQAANIRERKRMFNLNEAFDQLRRKV 128
EEEEEEE G G PK+K++ A+R AN RER RM LN+A D LRR +
Sbjct: 56 EEEEEEEDGEKPKRRG-PKKKKMTKARLERFRARRVKANARERTRMHGLNDALDNLRRVM 114
Query: 129 PTFAYEKRLSRIETLRLAIVYISFMTELLESCEKKE 164
P ++ ++LS+IETLRLA YI ++E+LE+ + E
Sbjct: 115 PCYSKTQKLSKIETLRLARNYIWALSEVLETGQTPE 150
>gi|27475985 neurogenic differentiation 6 [Homo sapiens]
Length = 337
Score = 70.5 bits (171), Expect = 6e-13
Identities = 43/97 (44%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
Query: 63 EEEECEVDQGDGEEEEEE--ERGRGVSLLGRPKRKRVITYAQRQAANIRERKRMFNLNEA 120
EE E E ++ D EEE+E R RG+ K + +RQ AN RER RM LN+A
Sbjct: 54 EETEKEEEEEDREEEDENGLPRRRGLRKKKTTKLRLERVKFRRQEANARERNRMHGLNDA 113
Query: 121 FDQLRRKVPTFAYEKRLSRIETLRLAIVYISFMTELL 157
D LR+ VP ++ ++LS+IETLRLA YI ++E+L
Sbjct: 114 LDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEIL 150
>gi|121114306 neurogenic differentiation 1 [Homo sapiens]
Length = 356
Score = 70.1 bits (170), Expect = 8e-13
Identities = 44/103 (42%), Positives = 62/103 (60%), Gaps = 7/103 (6%)
Query: 63 EEEECEVDQGDGEEEEEEERGRGVSLLGRPKRKRVITYA------QRQAANIRERKRMFN 116
EEE+ + D + EEEEEE+ + G PK+K++ +R AN RER RM
Sbjct: 58 EEEDEDEDLEEEEEEEEEDDDQKPKRRG-PKKKKMTKARLERFKLRRMKANARERNRMHG 116
Query: 117 LNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVYISFMTELLES 159
LN A D LR+ VP ++ ++LS+IETLRLA YI ++E+L S
Sbjct: 117 LNAALDNLRKVVPCYSKTQKLSKIETLRLAKNYIWALSEILRS 159
>gi|4885075 atonal homolog 1 [Homo sapiens]
Length = 354
Score = 68.6 bits (166), Expect = 2e-12
Identities = 36/77 (46%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Query: 85 GVSLLGRPKRKRV--ITYAQRQAANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIET 142
G S P K+V + +R AAN RER+RM LN AFDQLR +P+F +K+LS+ ET
Sbjct: 141 GCSRQRAPSSKQVNGVQKQRRLAANARERRRMHGLNHAFDQLRNVIPSFNNDKKLSKYET 200
Query: 143 LRLAIVYISFMTELLES 159
L++A +YI+ ++ELL++
Sbjct: 201 LQMAQIYINALSELLQT 217
>gi|21553337 atonal homolog 7 [Homo sapiens]
Length = 152
Score = 64.3 bits (155), Expect = 5e-11
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 102 QRQAANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVYISFMTELLESCE 161
+R AAN RER+RM LN AFD+LRR VP + +K+LS+ ETL++A+ YI +T +L E
Sbjct: 41 RRLAANARERRRMQGLNTAFDRLRRVVPQWGQDKKLSKYETLQMALSYIMALTRILAEAE 100
Query: 162 K 162
+
Sbjct: 101 R 101
>gi|38455396 neurogenin 1 [Homo sapiens]
Length = 237
Score = 60.8 bits (146), Expect = 5e-10
Identities = 47/154 (30%), Positives = 67/154 (43%), Gaps = 5/154 (3%)
Query: 9 VDTTVLDFVADLSLASPRRPLLCDFAPGVSLGDPALALREGRPRRMARFEEGDPEEEECE 68
++T + D S S L D L A A P R G P
Sbjct: 5 LETCISDLDCASSSGSDLSGFLTDEEDCARLQQAASASGPPAPAR-----RGAPNISRAS 59
Query: 69 VDQGDGEEEEEEERGRGVSLLGRPKRKRVITYAQRQAANIRERKRMFNLNEAFDQLRRKV 128
G ++E+E R RG + + + ++R AN RER RM NLN A D LR +
Sbjct: 60 EVPGAQDDEQERRRRRGRTRVRSEALLHSLRRSRRVKANDRERNRMHNLNAALDALRSVL 119
Query: 129 PTFAYEKRLSRIETLRLAIVYISFMTELLESCEK 162
P+F + +L++IETLR A YI + E L ++
Sbjct: 120 PSFPDDTKLTKIETLRFAYNYIWALAETLRLADQ 153
>gi|48255909 basic helix-loop-helix transcription factor 15 [Homo
sapiens]
Length = 199
Score = 60.8 bits (146), Expect = 5e-10
Identities = 42/119 (35%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Query: 52 RRMARFEEGDPEEEECEVDQGDGEEEEEEERGRGVS----LLGRPKRKRVITYAQRQAAN 107
R ++ EE E + + G E E RG G G V+ QRQAAN
Sbjct: 19 RLLSEDEENRSESDASDQSFGCCEGPEAARRGPGPGGGRRAGGGGGAGPVVVVRQRQAAN 78
Query: 108 IRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVYISFMTELLESCEKKESG 166
RER R ++N AF LR +PT +++LS+IETLRLA YI+ + +L + + G
Sbjct: 79 ARERDRTQSVNTAFTALRTLIPTEPVDRKLSKIETLRLASSYIAHLANVLLLGDSADDG 137
>gi|239756681 PREDICTED: basic helix-loop-helix family, member a9
[Homo sapiens]
Length = 203
Score = 58.2 bits (139), Expect = 3e-09
Identities = 44/124 (35%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 40 GDPALALREGRPRRMARFEEGDPEEEECEVDQGD----GEEEEEEERGRGVSLLGRPKRK 95
G P L L + + + G P C GD G RG GR + +
Sbjct: 4 GAPGLGLTARKGAEDSAEDLGGP----CPEPGGDSGVLGANGASCSRGEAEEPAGRRRAR 59
Query: 96 RVITYAQRQAANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVYISFMTE 155
V + A+R AAN+RERKR+ + NEAF+ LRR + KRLS+I TLR AI I+ ++
Sbjct: 60 PVRSKARRMAANVRERKRILDYNEAFNALRRALRHDLGGKRLSKIATLRRAIHRIAALSL 119
Query: 156 LLES 159
+L +
Sbjct: 120 VLRA 123
>gi|239751178 PREDICTED: basic helix-loop-helix family, member a9
[Homo sapiens]
Length = 235
Score = 58.2 bits (139), Expect = 3e-09
Identities = 44/124 (35%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 40 GDPALALREGRPRRMARFEEGDPEEEECEVDQGD----GEEEEEEERGRGVSLLGRPKRK 95
G P L L + + + G P C GD G RG GR + +
Sbjct: 4 GAPGLGLTARKGAEDSAEDLGGP----CPEPGGDSGVLGANGASCSRGEAEEPAGRRRAR 59
Query: 96 RVITYAQRQAANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVYISFMTE 155
V + A+R AAN+RERKR+ + NEAF+ LRR + KRLS+I TLR AI I+ ++
Sbjct: 60 PVRSKARRMAANVRERKRILDYNEAFNALRRALRHDLGGKRLSKIATLRRAIHRIAALSL 119
Query: 156 LLES 159
+L +
Sbjct: 120 VLRA 123
>gi|239745666 PREDICTED: basic helix-loop-helix family, member a9
[Homo sapiens]
Length = 235
Score = 58.2 bits (139), Expect = 3e-09
Identities = 44/124 (35%), Positives = 62/124 (50%), Gaps = 8/124 (6%)
Query: 40 GDPALALREGRPRRMARFEEGDPEEEECEVDQGD----GEEEEEEERGRGVSLLGRPKRK 95
G P L L + + + G P C GD G RG GR + +
Sbjct: 4 GAPGLGLTARKGAEDSAEDLGGP----CPEPGGDSGVLGANGASCSRGEAEEPAGRRRAR 59
Query: 96 RVITYAQRQAANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVYISFMTE 155
V + A+R AAN+RERKR+ + NEAF+ LRR + KRLS+I TLR AI I+ ++
Sbjct: 60 PVRSKARRMAANVRERKRILDYNEAFNALRRALRHDLGGKRLSKIATLRRAIHRIAALSL 119
Query: 156 LLES 159
+L +
Sbjct: 120 VLRA 123
>gi|31077092 neurogenin 2 [Homo sapiens]
Length = 272
Score = 58.2 bits (139), Expect = 3e-09
Identities = 46/131 (35%), Positives = 57/131 (43%), Gaps = 34/131 (25%)
Query: 61 DPEEEECEVDQGDGEEEEEEERGRGVS--------------LLG-------RPKRKRVIT 99
D EEEE G + E G+G LLG RP R R ++
Sbjct: 38 DEEEEEEPGASGGARRQRGAEAGQGARGGVAAGAEGCRPARLLGLVHDCKRRPSRARAVS 97
Query: 100 YAQRQA-------------ANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLA 146
+ A AN RER RM NLN A D LR +PTF + +L++IETLR A
Sbjct: 98 RGAKTAETVQRIKKTRRLKANNRERNRMHNLNAALDALREVLPTFPEDAKLTKIETLRFA 157
Query: 147 IVYISFMTELL 157
YI +TE L
Sbjct: 158 HNYIWALTETL 168
>gi|4507741 twist [Homo sapiens]
Length = 202
Score = 57.8 bits (138), Expect = 4e-09
Identities = 31/60 (51%), Positives = 44/60 (73%), Gaps = 1/60 (1%)
Query: 102 QRQAANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVYISFMTELLESCE 161
QR AN+RER+R +LNEAF LR+ +PT +K LS+I+TL+LA YI F+ ++L+S E
Sbjct: 109 QRVMANVRERQRTQSLNEAFAALRKIIPTLPSDK-LSKIQTLKLAARYIDFLYQVLQSDE 167
>gi|17981708 twist homolog 2 [Homo sapiens]
Length = 160
Score = 57.8 bits (138), Expect = 4e-09
Identities = 31/61 (50%), Positives = 45/61 (73%), Gaps = 1/61 (1%)
Query: 101 AQRQAANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVYISFMTELLESC 160
+QR AN+RER+R +LNEAF LR+ +PT +K LS+I+TL+LA YI F+ ++L+S
Sbjct: 66 SQRILANVRERQRTQSLNEAFAALRKIIPTLPSDK-LSKIQTLKLAARYIDFLYQVLQSD 124
Query: 161 E 161
E
Sbjct: 125 E 125
>gi|68989258 neurogenin 3 [Homo sapiens]
Length = 214
Score = 57.8 bits (138), Expect = 4e-09
Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Query: 82 RGRGVSLLGRPKRKRVITYAQRQAANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIE 141
R R S L K++R ++R+ AN RER RM NLN A D LR +PTF + +L++IE
Sbjct: 68 RSRPKSELALSKQRR----SRRKKANDRERNRMHNLNSALDALRGVLPTFPDDAKLTKIE 123
Query: 142 TLRLAIVYISFMTELL 157
TLR A YI +T+ L
Sbjct: 124 TLRFAHNYIWALTQTL 139
>gi|116805332 musculin [Homo sapiens]
Length = 206
Score = 56.6 bits (135), Expect = 9e-09
Identities = 42/126 (33%), Positives = 65/126 (51%), Gaps = 15/126 (11%)
Query: 55 ARFEEGDPEEEECEVDQGDGEEEEEEER-------GRGVSLLGRPKRK-------RVITY 100
A E+ D EEE C + E + +R G G S G K+
Sbjct: 47 AEEEDPDGEEERCALGTAGSAEGCKRKRPRVAGGGGAGGSAGGGGKKPLPAKGSAAECKQ 106
Query: 101 AQRQAANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVYISFMTELLESC 160
+QR AAN RER RM L++AF +L+ +P + +LS+++TLRLA YI+ + +LL+
Sbjct: 107 SQRNAANARERARMRVLSKAFSRLKTSLPWVPPDTKLSKLDTLRLASSYIAHLRQLLQE- 165
Query: 161 EKKESG 166
++ E+G
Sbjct: 166 DRYENG 171
>gi|161484632 nescient helix loop helix 2 [Homo sapiens]
Length = 135
Score = 56.2 bits (134), Expect = 1e-08
Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 65 EECEVDQGDGEEEEEEERGRGVSLLGRP--KRKRVITYAQRQAANIRERKRMFNLNEAFD 122
E E +GDG+ L R +R+R T R A RER R+ N AF
Sbjct: 39 EPVEEAEGDGKGGSRAALYPHPQQLSREEKRRRRRATAKYRSAHATRERIRVEAFNLAFA 98
Query: 123 QLRRKVPTFAYEKRLSRIETLRLAIVYISFMTELLE 158
+LR+ +PT +K+LS+IE LRLAI YIS++ +L+
Sbjct: 99 ELRKLLPTLPPDKKLSKIEILRLAICYISYLNHVLD 134
>gi|5031945 nescient helix loop helix 2 [Homo sapiens]
Length = 135
Score = 56.2 bits (134), Expect = 1e-08
Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 2/96 (2%)
Query: 65 EECEVDQGDGEEEEEEERGRGVSLLGRP--KRKRVITYAQRQAANIRERKRMFNLNEAFD 122
E E +GDG+ L R +R+R T R A RER R+ N AF
Sbjct: 39 EPVEEAEGDGKGGSRAALYPHPQQLSREEKRRRRRATAKYRSAHATRERIRVEAFNLAFA 98
Query: 123 QLRRKVPTFAYEKRLSRIETLRLAIVYISFMTELLE 158
+LR+ +PT +K+LS+IE LRLAI YIS++ +L+
Sbjct: 99 ELRKLLPTLPPDKKLSKIEILRLAICYISYLNHVLD 134
>gi|5031943 nescient helix loop helix 1 [Homo sapiens]
Length = 133
Score = 55.5 bits (132), Expect = 2e-08
Identities = 30/66 (45%), Positives = 43/66 (65%)
Query: 93 KRKRVITYAQRQAANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVYISF 152
+R+R T R A RER R+ N AF +LR+ +PT +K+LS+IE LRLAI YIS+
Sbjct: 67 RRRRRATAKYRTAHATRERIRVEAFNLAFAELRKLLPTLPPDKKLSKIEILRLAICYISY 126
Query: 153 MTELLE 158
+ +L+
Sbjct: 127 LNHVLD 132
>gi|148922889 scleraxis homolog B [Homo sapiens]
Length = 201
Score = 55.1 bits (131), Expect = 3e-08
Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 7/74 (9%)
Query: 90 GRPKRKRVITYAQRQAANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVY 149
GRP R+ QR AN RER R ++N AF LR +PT +++LS+IETLRLA Y
Sbjct: 68 GRPGREP----RQRHTANARERDRTNSVNTAFTALRTLIPTEPADRKLSKIETLRLASSY 123
Query: 150 ISFMTELL---ESC 160
IS + +L E+C
Sbjct: 124 ISHLGNVLLAGEAC 137
>gi|186972126 scleraxis homolog A [Homo sapiens]
Length = 201
Score = 55.1 bits (131), Expect = 3e-08
Identities = 34/74 (45%), Positives = 45/74 (60%), Gaps = 7/74 (9%)
Query: 90 GRPKRKRVITYAQRQAANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVY 149
GRP R+ QR AN RER R ++N AF LR +PT +++LS+IETLRLA Y
Sbjct: 68 GRPGREP----RQRHTANARERDRTNSVNTAFTALRTLIPTEPADRKLSKIETLRLASSY 123
Query: 150 ISFMTELL---ESC 160
IS + +L E+C
Sbjct: 124 ISHLGNVLLAGEAC 137
>gi|4885619 T-cell acute lymphocytic leukemia 2 [Homo sapiens]
Length = 108
Score = 54.7 bits (130), Expect = 4e-08
Identities = 27/60 (45%), Positives = 42/60 (70%)
Query: 107 NIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVYISFMTELLESCEKKESG 166
N RER R N+N AF +LR+ +PT +K+LS+ ETLRLA+ YI+F+ ++L +++G
Sbjct: 8 NTRERWRQQNVNSAFAKLRKLIPTHPPDKKLSKNETLRLAMRYINFLVKVLGEQSLQQTG 67
>gi|4507363 T-cell acute lymphocytic leukemia 1 [Homo sapiens]
Length = 331
Score = 53.9 bits (128), Expect = 6e-08
Identities = 28/62 (45%), Positives = 42/62 (67%)
Query: 102 QRQAANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVYISFMTELLESCE 161
+R N RER R N+N AF +LR+ +PT +K+LS+ E LRLA+ YI+F+ +LL E
Sbjct: 188 RRIFTNSRERWRQQNVNGAFAELRKLIPTHPPDKKLSKNEILRLAMKYINFLAKLLNDQE 247
Query: 162 KK 163
++
Sbjct: 248 EE 249
>gi|239752994 PREDICTED: achaete-scute complex homolog 5
(Drosophila) [Homo sapiens]
Length = 313
Score = 53.1 bits (126), Expect = 1e-07
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 104 QAANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVYISFMTELLES 159
Q N RER+R+ +NE + +LR +P EKRLS++ETLR AI YI ++ ELL S
Sbjct: 193 QKRNERERQRVKCVNEGYARLRGHLPGALAEKRLSKVETLRAAIRYIKYLQELLSS 248
>gi|239747548 PREDICTED: achaete-scute complex homolog 5
(Drosophila) [Homo sapiens]
Length = 313
Score = 53.1 bits (126), Expect = 1e-07
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 104 QAANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVYISFMTELLES 159
Q N RER+R+ +NE + +LR +P EKRLS++ETLR AI YI ++ ELL S
Sbjct: 193 QKRNERERQRVKCVNEGYARLRGHLPGALAEKRLSKVETLRAAIRYIKYLQELLSS 248
>gi|239741422 PREDICTED: achaete-scute complex homolog 5 [Homo
sapiens]
Length = 313
Score = 53.1 bits (126), Expect = 1e-07
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 104 QAANIRERKRMFNLNEAFDQLRRKVPTFAYEKRLSRIETLRLAIVYISFMTELLES 159
Q N RER+R+ +NE + +LR +P EKRLS++ETLR AI YI ++ ELL S
Sbjct: 193 QKRNERERQRVKCVNEGYARLRGHLPGALAEKRLSKVETLRAAIRYIKYLQELLSS 248
>gi|57529222 basic helix-loop-helix domain containing, class B, 4
[Homo sapiens]
Length = 225
Score = 53.1 bits (126), Expect = 1e-07
Identities = 40/117 (34%), Positives = 61/117 (52%), Gaps = 13/117 (11%)
Query: 51 PRRMARFEEGDPEEEECEVDQGDGEEEEEEERGRGVSLLGR--PKRKRVITYAQRQAANI 108
PR A+ E E+ D+ D E+ RG G + GR P+ +R + R + N
Sbjct: 55 PRAPAQAAESSGEQSG---DEDDAFEQRRRRRGPGSAADGRRRPREQRSL----RLSINA 107
Query: 109 RERKRMFNLNEAFDQLRRKVPTFAYE---KRLSRIETLRLAIVYISFMTELLESCEK 162
RER+RM +LN+A D LR +P +A+ ++LS+I TL LA YI + L+ +
Sbjct: 108 RERRRMHDLNDALDGLRAVIP-YAHSPSVRKLSKIATLLLAKNYILMQAQALDEMRR 163
>gi|38202237 transcription factor 21 [Homo sapiens]
Length = 179
Score = 52.4 bits (124), Expect = 2e-07
Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 18/104 (17%)
Query: 76 EEEEEERGRGVSLLGRPKRKRVIT-------------YAQRQAANIRERKRMFNLNEAFD 122
E ++GRG G KR++ T QR AAN RER RM L++AF
Sbjct: 45 ENGSPQKGRG----GLGKRRKAPTKKSPLSGVSQEGKQVQRNAANARERARMRVLSKAFS 100
Query: 123 QLRRKVPTFAYEKRLSRIETLRLAIVYISFMTELLESCEKKESG 166
+L+ +P + +LS+++TLRLA YI+ + ++L + +K E+G
Sbjct: 101 RLKTTLPWVPPDTKLSKLDTLRLASSYIAHLRQILAN-DKYENG 143
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,899,991
Number of Sequences: 37866
Number of extensions: 365105
Number of successful extensions: 6567
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 298
Number of HSP's successfully gapped in prelim test: 134
Number of HSP's that attempted gapping in prelim test: 3681
Number of HSP's gapped (non-prelim): 2089
length of query: 166
length of database: 18,247,518
effective HSP length: 95
effective length of query: 71
effective length of database: 14,650,248
effective search space: 1040167608
effective search space used: 1040167608
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.