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Search of human proteins with 229577273
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|229577273 BUD13 homolog isoform 2 [Homo sapiens]
(485 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|229577273 BUD13 homolog isoform 2 [Homo sapiens] 1001 0.0
gi|14249338 BUD13 homolog isoform 1 [Homo sapiens] 904 0.0
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 75 1e-13
gi|217330641 IWS1 homolog [Homo sapiens] 74 2e-13
gi|47578107 delangin isoform B [Homo sapiens] 62 2e-09
gi|47578105 delangin isoform A [Homo sapiens] 62 2e-09
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 60 4e-09
gi|153251865 hypothetical protein LOC84226 [Homo sapiens] 59 1e-08
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 57 5e-08
gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens] 56 6e-08
gi|224548936 hypothetical protein LOC100170229 [Homo sapiens] 56 8e-08
gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens] 55 1e-07
gi|55741709 RNA binding motif protein 25 [Homo sapiens] 54 3e-07
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 54 4e-07
gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo sap... 54 4e-07
gi|52426735 ankyrin 2 isoform 1 [Homo sapiens] 52 9e-07
gi|4504487 histidine rich calcium binding protein precursor [Hom... 52 2e-06
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 51 2e-06
gi|148746195 trichohyalin [Homo sapiens] 50 6e-06
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 50 6e-06
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 50 6e-06
gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo sapi... 49 8e-06
gi|169177031 PREDICTED: similar to hCG30082, partial [Homo sapiens] 49 1e-05
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 49 1e-05
gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens] 48 2e-05
gi|50083281 KIAA1853 protein [Homo sapiens] 47 3e-05
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 47 5e-05
gi|113415504 PREDICTED: similar to ribonucleic acid binding prot... 46 7e-05
gi|169166499 PREDICTED: similar to ribonucleic acid binding prot... 46 7e-05
gi|113415498 PREDICTED: similar to ribonucleic acid binding prot... 46 7e-05
>gi|229577273 BUD13 homolog isoform 2 [Homo sapiens]
Length = 485
Score = 1001 bits (2587), Expect = 0.0
Identities = 485/485 (100%), Positives = 485/485 (100%)
Query: 1 MAAAPPLSKAEYLKRYLSGADAGVDRGSESGRKRRKKRPKPGGAGGKGMRIVDDDVSWTA 60
MAAAPPLSKAEYLKRYLSGADAGVDRGSESGRKRRKKRPKPGGAGGKGMRIVDDDVSWTA
Sbjct: 1 MAAAPPLSKAEYLKRYLSGADAGVDRGSESGRKRRKKRPKPGGAGGKGMRIVDDDVSWTA 60
Query: 61 ISTTKLEKEEEEDDGDLPVVAEFVDERPEEVKQMEAFRSSAKWKLLGGHNEDLPSNRHFR 120
ISTTKLEKEEEEDDGDLPVVAEFVDERPEEVKQMEAFRSSAKWKLLGGHNEDLPSNRHFR
Sbjct: 61 ISTTKLEKEEEEDDGDLPVVAEFVDERPEEVKQMEAFRSSAKWKLLGGHNEDLPSNRHFR 120
Query: 121 HDTPDSSPRRVRHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRRI 180
HDTPDSSPRRVRHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRRI
Sbjct: 121 HDTPDSSPRRVRHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRRI 180
Query: 181 RHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSDSDL 240
RHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSDSDL
Sbjct: 181 RHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSDSDL 240
Query: 241 SPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKKAAHMYSGAKTGLVLTD 300
SPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKKAAHMYSGAKTGLVLTD
Sbjct: 241 SPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKKAAHMYSGAKTGLVLTD 300
Query: 301 IQREQQELKEQDQETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQRRKAEKDSERDELY 360
IQREQQELKEQDQETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQRRKAEKDSERDELY
Sbjct: 301 IQREQQELKEQDQETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQRRKAEKDSERDELY 360
Query: 361 AQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDRMLREQEREGDPMANFIKKNKA 420
AQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDRMLREQEREGDPMANFIKKNKA
Sbjct: 361 AQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDRMLREQEREGDPMANFIKKNKA 420
Query: 421 KENKNKKVRPRYSGPAPPPNRFNIWPGYRWDGVDRSNGFEQKRFARLASKKAVEELAYKW 480
KENKNKKVRPRYSGPAPPPNRFNIWPGYRWDGVDRSNGFEQKRFARLASKKAVEELAYKW
Sbjct: 421 KENKNKKVRPRYSGPAPPPNRFNIWPGYRWDGVDRSNGFEQKRFARLASKKAVEELAYKW 480
Query: 481 SVEDM 485
SVEDM
Sbjct: 481 SVEDM 485
>gi|14249338 BUD13 homolog isoform 1 [Homo sapiens]
Length = 619
Score = 904 bits (2337), Expect = 0.0
Identities = 474/619 (76%), Positives = 476/619 (76%), Gaps = 134/619 (21%)
Query: 1 MAAAPPLSKAEYLKRYLSGADAGVDRGSESGRKRRKKRPKPGGAGGKGMRIVDDDVSWTA 60
MAAAPPLSKAEYLKRYLSGADAGVDRGSESGRKRRKKRPKPGGAGGKGMRIVDDDVSWTA
Sbjct: 1 MAAAPPLSKAEYLKRYLSGADAGVDRGSESGRKRRKKRPKPGGAGGKGMRIVDDDVSWTA 60
Query: 61 ISTTKLEKEEEEDDGDLPVVAEFVDERPEEVKQMEAFRSSAKWKLLGGHNEDLPSNRHFR 120
ISTTKLEKEEEEDDGDLPVVAEFVDERPEEVKQMEAFRSSAKWKLLGGHNEDLPSNRHFR
Sbjct: 61 ISTTKLEKEEEEDDGDLPVVAEFVDERPEEVKQMEAFRSSAKWKLLGGHNEDLPSNRHFR 120
Query: 121 HDTPDSSPRRVRHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDS-------- 172
HDTPDSSPRRVRHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDS
Sbjct: 121 HDTPDSSPRRVRHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRRI 180
Query: 173 -------------------------------------------DTSPPRRIRHDSSDTSP 189
D SPPRR RH SSD S
Sbjct: 181 RHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGASPRRVRHDSPDPSPPRRARHGSSDISS 240
Query: 190 PR-----------------------RARHDSPDP-------------------------- 200
PR RARHDSPD
Sbjct: 241 PRRVHNNSPDTSRRTLGSSDTQQLRRARHDSPDLAPNVTYSLPRTKSGKAPERASSKTSP 300
Query: 201 ------------------------SPPRRPQH----------NSSGDCQKATDSDLSSPR 226
SPPR+ Q +S GDCQKATDSDLSSPR
Sbjct: 301 HWKESGASHLSFPKNSKYEYDPDISPPRKKQAKSHFGDKKQLDSKGDCQKATDSDLSSPR 360
Query: 227 HKQSPGHQDSDSDLSPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKKAA 286
HKQSPGHQDSDSDLSPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKKAA
Sbjct: 361 HKQSPGHQDSDSDLSPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKKAA 420
Query: 287 HMYSGAKTGLVLTDIQREQQELKEQDQETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQ 346
HMYSGAKTGLVLTDIQREQQELKEQDQETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQ
Sbjct: 421 HMYSGAKTGLVLTDIQREQQELKEQDQETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQ 480
Query: 347 RRKAEKDSERDELYAQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDRMLREQER 406
RRKAEKDSERDELYAQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDRMLREQER
Sbjct: 481 RRKAEKDSERDELYAQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDRMLREQER 540
Query: 407 EGDPMANFIKKNKAKENKNKKVRPRYSGPAPPPNRFNIWPGYRWDGVDRSNGFEQKRFAR 466
EGDPMANFIKKNKAKENKNKKVRPRYSGPAPPPNRFNIWPGYRWDGVDRSNGFEQKRFAR
Sbjct: 541 EGDPMANFIKKNKAKENKNKKVRPRYSGPAPPPNRFNIWPGYRWDGVDRSNGFEQKRFAR 600
Query: 467 LASKKAVEELAYKWSVEDM 485
LASKKAVEELAYKWSVEDM
Sbjct: 601 LASKKAVEELAYKWSVEDM 619
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 75.5 bits (184), Expect = 1e-13
Identities = 78/279 (27%), Positives = 113/279 (40%), Gaps = 39/279 (13%)
Query: 29 ESGRKRRKK-RPKPGGAGGKGMRIVDDDVSWTAISTTKLEK----EEEEDDGDLPVVAEF 83
+S R R+ + PG GK + + + K K E EED G A+
Sbjct: 419 QSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADS 478
Query: 84 VDERPEEVKQMEAFRSSAKWKLLGGHNEDLPSNRHFRHDTPDSSPRRVRHGTPDPSPRKD 143
V +R + +Q + +SS+ ++ P H ++ R + PSPRK
Sbjct: 479 VQQRRQYRRQNQ--QSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKR 536
Query: 144 RHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRRIRHDSSDTSPPRR------ARHDS 197
+ +T SPR R +P P P R R S PPRR R + T PPRR R S
Sbjct: 537 QKET---SPRGRRRRSPSPPPTRRRRSPSPAPPPRRRR---TPTPPPRRRTPSPPPRRRS 590
Query: 198 PDP---SPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSDSDLSPPRNRPRHRSSDS 254
P P SPP + +++ S ++ T S P+ + SP PP+ R H
Sbjct: 591 PSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPS--------PPPKRRVSHSPPPK 642
Query: 255 DLSPPRRRQRTKSSDS----DLSPPR-----RSQPPGKK 284
S P ++R+ S S SP R RS P K+
Sbjct: 643 QRSSPVTKRRSPSLSSKHRKGSSPSRSTREARSPQPNKR 681
Score = 70.9 bits (172), Expect = 3e-12
Identities = 73/239 (30%), Positives = 94/239 (39%), Gaps = 37/239 (15%)
Query: 68 KEEEEDDGDLPVVAEFVDERPEE--VKQMEAFRS-------SAKWKLLGGHNEDLPSNRH 118
++ ++ D + DERP+ VK E R SA E P R
Sbjct: 487 RQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRR 546
Query: 119 FRHDTPDSSPRRVRHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPR 178
R +P + RR R +P P PR+ R TP P PRR TP P P R + SPP
Sbjct: 547 RRSPSPPPTRRR-RSPSPAPPPRRRR--TPTPPPRRR---TPSPPPRRRSPSPRRYSPPI 600
Query: 179 RIRHDSSD-------TSPPRRARHDSPDPSPPRRPQHN-----SSGDCQKATDSDLSSPR 226
+ R+ S + PP R SP P P RR H+ S K LSS
Sbjct: 601 QRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKH 660
Query: 227 HKQSPGHQDSDSDLSPPRNR-----PRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQP 280
K S + + SP N+ PR R+ + SPP R+ S SP RR P
Sbjct: 661 RKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASS-----SPQRRQSP 714
Score = 61.2 bits (147), Expect = 2e-09
Identities = 59/223 (26%), Positives = 96/223 (43%), Gaps = 26/223 (11%)
Query: 79 VVAEFVDERPEEVKQMEAFRSSAKWKLLGGHNEDLPSNRHFRHDTPDS--------SPRR 130
+ + F++ + EE+KQ R + KL +D ++ + + S SPRR
Sbjct: 119 IPSAFLELKKEEIKQ----RQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRR 174
Query: 131 VRHGTPDP----SP-RKDRHDTPDPSPR-RARHDTPDPSPLRGARHDSDTSPPRRIRHDS 184
+ +P P SP R++R + SPR R + +P P+P + + P +++ S
Sbjct: 175 RKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPS 234
Query: 185 SD--TSPPRRARHDSPDPSP-PRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSDSDLS 241
TS + P+P P P+ P + +K + + + PR + + S
Sbjct: 235 VQEATSTSDILKVPKPEPIPEPKEPSPEKNS--KKEKEKEKTRPRSRSRSKSRSRTRSRS 292
Query: 242 PPRNRPR--HRSSDSDLSPPRR-RQRTKSSDSDLSPPRRSQPP 281
P RPR HRS SP RR R + S +PPRR PP
Sbjct: 293 PSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPP 335
Score = 58.9 bits (141), Expect = 1e-08
Identities = 82/337 (24%), Positives = 118/337 (35%), Gaps = 57/337 (16%)
Query: 137 DPSPRKDRHDTPDPSPRRARHDTPDPSPLR-GARHDSDTSPPRRIRHDSSDTSPPRR--- 192
+PSP K+ + R R + S R +R S T P RR R S SP RR
Sbjct: 258 EPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSP 317
Query: 193 ARHDSPD--------PSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSDSDLSPPR 244
R SP P PPR + S ++ + + LS S S SPP+
Sbjct: 318 RRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSG-----SSSSSSSSRSRSPPK 372
Query: 245 NRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKKAAHMYSGAKTGLVLTDIQRE 304
P+ S SPPR+ +R S SPPRR P A +
Sbjct: 373 KPPKRTS-----SPPRKTRRLSPS---ASPPRRRHRPSPPAT------------PPPKTR 412
Query: 305 QQELKEQDQETMAFEAEFQYAET---VFRDKSGRKRNLKLERLEQRRKAEKDSERDELYA 361
+Q T T V + K KR + R+ +SE D+
Sbjct: 413 HSPTPQQSNRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGK 472
Query: 362 QWGKGLAQSRQQ-----QQNVED----AMKEMQKPLARYIDDEDLDRMLREQ-EREGDPM 411
Q R+Q QQ+ D + E ++P ++ + ++ R R R P
Sbjct: 473 MAAADSVQQRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPS 532
Query: 412 ANFIKKNKAKENKNKKV-------RPRYSGPAPPPNR 441
+K + + ++ R R PAPPP R
Sbjct: 533 PRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRR 569
Score = 52.8 bits (125), Expect = 7e-07
Identities = 63/258 (24%), Positives = 97/258 (37%), Gaps = 57/258 (22%)
Query: 85 DERPEEVKQMEAFRSSAKWKLLGGHNEDLPSN----RHFRHDTPDSSPRRVRHGTPDPSP 140
+ + E+ K+ RS ++ K PS+ R R + SPRR PSP
Sbjct: 264 NSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSP 323
Query: 141 RK---DRHDTPDPSPRRARHDTPDPSPLRGARHDS------------------------- 172
R+ R P P RR+R SP+R R S
Sbjct: 324 RRRTPPRRMPPPPRHRRSR------SPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKR 377
Query: 173 DTSPPRRIRHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPG 232
+SPPR+ R S SPPRR SP +PP + +H+ + T S ++ G
Sbjct: 378 TSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPGRTSG 437
Query: 233 ----HQDSDSDLSP-PRNRPRH--------------RSSDSDLSPPRRRQRTKSSDSDLS 273
H+ ++ SP P +PR ++DS + R++ + S SD
Sbjct: 438 KVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQQRRQYRRQNQQSSSDSG 497
Query: 274 PPRRSQPPGKKAAHMYSG 291
S+ K +H+ +G
Sbjct: 498 SSSSSEDERPKRSHVKNG 515
Score = 43.5 bits (101), Expect = 4e-04
Identities = 38/154 (24%), Positives = 57/154 (37%), Gaps = 38/154 (24%)
Query: 114 PSNRHFRHDTP-----DSSPRRVRHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGA 168
P+ RH P SSP VR G SP++ + +P P R TP+P ++ A
Sbjct: 678 PNKRHSPSPRPRAPQTSSSPPPVRRGASS-SPQRRQSPSPSTRPIRRVSRTPEPKKIKKA 736
Query: 169 RHDSDTS-----------------------PPRRIRHDSSDTS-----PPRRARHDSPDP 200
S S PP ++ S T+ P ++A+ +P P
Sbjct: 737 ASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPSTNWSPAVPVKKAKSPTPSP 796
Query: 201 SPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQ 234
SPPR G +K +HK+ H+
Sbjct: 797 SPPRNSDQEGGGKKKKKK----KDKKHKKDKKHK 826
>gi|217330641 IWS1 homolog [Homo sapiens]
Length = 819
Score = 74.3 bits (181), Expect = 2e-13
Identities = 81/349 (23%), Positives = 135/349 (38%), Gaps = 21/349 (6%)
Query: 85 DERPEEVKQMEAFRSSAKWKLLGGHNEDLPSNRHFRHDTPDSSPRRVRHGTPDPSPRKDR 144
D EE +++ S + +LL GH D + +H DS ++ SP D
Sbjct: 119 DSESEETRKLPGSDSENE-ELLNGHASDSENEDVGKHPASDSEIEELQK-----SPASDS 172
Query: 145 HDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRRIRHDSSDTSPPRRARHDSPDPSPPR 204
P+ + ++ +P P A + PP+ DS P+ DS PPR
Sbjct: 173 ETEDALKPQISDSESEEP-PRHQASDSENEEPPKPRMSDSESEELPKPQVSDSESEEPPR 231
Query: 205 RPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSDSDLSPPRNRPRHRSSDSDLSPPRRRQR 264
+S + + +S + P HQ SDS+ P+ R SDS+ P R Q
Sbjct: 232 HQASDSENE--ELPKPRISDSESEDPPRHQASDSE---NEELPKPRISDSESEDPPRNQA 286
Query: 265 TKSSDSDLSPPRRSQPPGKKAAHMYSGAKTGLVLTDIQREQQELK---EQDQETMAFEAE 321
+ S + +L PR S ++ G + D R +Q+ + + D+E + E
Sbjct: 287 SDSENEELPKPRVSD---SESEGPQKGPASDSETEDASRHKQKPESDDDSDRENKGEDTE 343
Query: 322 FQYAETVFRDKSGRKRNLKLERLEQRRKAEK-DSERDELYAQWGKGLAQSRQQQQNVEDA 380
Q RK+ + E+ K +K DS+ DE + K + + ED
Sbjct: 344 MQNDSFHSDSHMDRKKFHSSDSEEEEHKKQKMDSDEDEKEGEEEKVAKRKAAVLSDSEDE 403
Query: 381 MKEMQKP--LARYIDDEDLDRMLREQEREGDPMANFIKKNKAKENKNKK 427
K K + DD D D + + + +A+ ++ KE +KK
Sbjct: 404 EKASAKKSRVVSDADDSDSDAVSDKSGKREKTIASDSEEEAGKELSDKK 452
Score = 58.5 bits (140), Expect = 1e-08
Identities = 76/372 (20%), Positives = 144/372 (38%), Gaps = 24/372 (6%)
Query: 27 GSESGRKRRKKRPKPGGAG-----GKGMRIVDDDVSWTAISTTKLEKEEEEDDGDLPVVA 81
GS+S + +K P G ++DV S +++E+ ++ D +
Sbjct: 117 GSDSESEETRKLPGSDSENEELLNGHASDSENEDVGKHPASDSEIEELQKSPASD----S 172
Query: 82 EFVDERPEEVKQMEAFRSSAKWKLLGGHNEDLPSNRHFRHDTPDSSPRRVRHGTPDPSPR 141
E D ++ E+ + + NE+ P R ++ + +V + PR
Sbjct: 173 ETEDALKPQISDSES-EEPPRHQASDSENEEPPKPRMSDSESEELPKPQVSDSESEEPPR 231
Query: 142 KDRHDTPD---PSPRRARHDTPDPSPLRGARHDSDTSPPRRIRHDSSDTSPPRRARHDSP 198
D+ + P PR + ++ DP + + +++ P RI DS PPR DS
Sbjct: 232 HQASDSENEELPKPRISDSESEDPPRHQASDSENEELPKPRI-SDSESEDPPRNQASDSE 290
Query: 199 DPSPPR-RPQHNSSGDCQKATDSDL---SSPRHKQSP-GHQDSDSDLSPPRNRPRHRSSD 253
+ P+ R + S QK SD + RHKQ P DSD + ++ S
Sbjct: 291 NEELPKPRVSDSESEGPQKGPASDSETEDASRHKQKPESDDDSDRENKGEDTEMQNDSFH 350
Query: 254 SDLSPPRRRQRTKSSDSDLSPPRR--SQPPGKKAAHMYSGAKTGLVLTDIQREQQELKEQ 311
SD R++ + S+ + ++ S K+ + VL+D E +E
Sbjct: 351 SDSHMDRKKFHSSDSEEEEHKKQKMDSDEDEKEGEEEKVAKRKAAVLSD--SEDEEKASA 408
Query: 312 DQETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQRRKAEKDSERDELYAQWGKGLAQSR 371
+ + +A+ ++ V DKSG++ E+ E +++E +G
Sbjct: 409 KKSRVVSDADDSDSDAV-SDKSGKREKTIASDSEEEAGKELSDKKNEEKDLFGSDSESGN 467
Query: 372 QQQQNVEDAMKE 383
+++ + D E
Sbjct: 468 EEENLIADIFGE 479
Score = 46.2 bits (108), Expect = 7e-05
Identities = 72/340 (21%), Positives = 126/340 (37%), Gaps = 61/340 (17%)
Query: 107 GGHNEDLPSNRHFRHDTPDSSPRRVRHGTPDPSPRKD-----RH--DTPDPSPRRARHDT 159
G ED + +H DT RH + S R+D H D+ + P
Sbjct: 26 GSDGEDDVNEQHSGSDTGSVE----RHSENETSDREDGLPKGHHVTDSENDEPLNLNASD 81
Query: 160 PDPSPLRGARHDSDTSPPRRIRHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATD 219
+ L + DSD+ R +SD+ +H S S R S + ++ +
Sbjct: 82 SESEELHRQK-DSDSESEERAEPPASDSENEDVNQHGSDSESEETRKLPGSDSENEELLN 140
Query: 220 SDLSSPRHKQSPGHQDSDSDL-----------------------SPPRNRPRHRSSDSDL 256
S ++ H SDS++ S PRH++SDS+
Sbjct: 141 GHASDSENEDVGKHPASDSEIEELQKSPASDSETEDALKPQISDSESEEPPRHQASDSEN 200
Query: 257 SPPRRRQRTKSSDSDLSPPRRS-----QPPGKKAAHMYSGAKTGLVLTDIQRE----QQE 307
P + + + S +L P+ S +PP +A+ + ++D + E Q
Sbjct: 201 EEPPKPRMSDSESEELPKPQVSDSESEEPPRHQASDSENEELPKPRISDSESEDPPRHQA 260
Query: 308 LKEQDQETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQRRKAEKDSERDELYAQWGKGL 367
+++E +E R+++ N E L + R ++ +SE + KG
Sbjct: 261 SDSENEELPKPRISDSESEDPPRNQASDSEN---EELPKPRVSDSESEGPQ------KGP 311
Query: 368 AQSRQQQQNVEDAMKEMQKPLARYIDDEDLDRMLREQERE 407
A + EDA + QKP + D+D DR + ++ E
Sbjct: 312 ASDSE----TEDASRHKQKPES----DDDSDRENKGEDTE 343
>gi|47578107 delangin isoform B [Homo sapiens]
Length = 2697
Score = 61.6 bits (148), Expect = 2e-09
Identities = 80/391 (20%), Positives = 151/391 (38%), Gaps = 35/391 (8%)
Query: 51 IVDDDVSWTAISTTKLEKEEEEDDGDLPVVAEFVDERPEEVKQMEAFRSSAKWKLLGGHN 110
IV+ + +S TK + ++++G +E RPE KQ R + GH
Sbjct: 668 IVEPKQNENRLSDTK-PNDNKQNNGR----SETTKSRPETPKQKGESRPETPKQKSDGHP 722
Query: 111 EDLPSNRHFRHDTPDS-------SPRRVRHGTPD-PSPRKD-RHDTPDPS----PRRARH 157
E R +TP +P++ G P+ P R D R D+ PS P ++H
Sbjct: 723 ETPKQKGDGRPETPKQKGESRPETPKQKNEGRPETPKHRHDNRRDSGKPSTEKKPEVSKH 782
Query: 158 --DTPDPSPLRGARHDSDTSPPRRIRHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQ 215
DT SP R S+ + + R D S R HD+ S R GD
Sbjct: 783 KQDTKSDSP----RLKSERAEALKQRPDGRSVSESLRRDHDNKQKSDDRGESERHRGDQS 838
Query: 216 KATDSDLSSPRHKQSPGHQDSDSDLSPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPP 275
+ + + G + S + RH S DS P Q+++ P
Sbjct: 839 RVRRPETLRSSSRNEHGIKSDSSKTDKLERKHRHESGDSRERPSSGEQKSRPDS-----P 893
Query: 276 RRSQPPGKKAAHMYSGAKTGLVLTDIQREQQELKEQDQETMAFEAEFQYAETVFRDKSGR 335
R Q K+ G K+ D +R + + D + + ++ + +SG
Sbjct: 894 RVKQGDSNKSRSDKLGFKSP-TSKDDKRTEGNKSKVDTNKAHPDNKAEFPSYLLGGRSGA 952
Query: 336 KRNLKLERLEQRRKAEKDSERDELYAQWGKGLAQSRQQQQNVEDAMKEMQKPLA--RYID 393
+N + ++++ + E ++ KG + + ++ + + + + KP+ + +
Sbjct: 953 LKNFVIPKIKRDKDGNVTQETKKMEM---KGEPKDKVEKIGLVEDLNKGAKPVVVLQKLS 1009
Query: 394 DEDLDRMLREQEREGDPMANFIKKNKAKENK 424
+D+ ++++++E + IK +K NK
Sbjct: 1010 LDDVQKLIKDREDKSRSSLKPIKNKPSKSNK 1040
>gi|47578105 delangin isoform A [Homo sapiens]
Length = 2804
Score = 61.6 bits (148), Expect = 2e-09
Identities = 80/391 (20%), Positives = 151/391 (38%), Gaps = 35/391 (8%)
Query: 51 IVDDDVSWTAISTTKLEKEEEEDDGDLPVVAEFVDERPEEVKQMEAFRSSAKWKLLGGHN 110
IV+ + +S TK + ++++G +E RPE KQ R + GH
Sbjct: 668 IVEPKQNENRLSDTK-PNDNKQNNGR----SETTKSRPETPKQKGESRPETPKQKSDGHP 722
Query: 111 EDLPSNRHFRHDTPDS-------SPRRVRHGTPD-PSPRKD-RHDTPDPS----PRRARH 157
E R +TP +P++ G P+ P R D R D+ PS P ++H
Sbjct: 723 ETPKQKGDGRPETPKQKGESRPETPKQKNEGRPETPKHRHDNRRDSGKPSTEKKPEVSKH 782
Query: 158 --DTPDPSPLRGARHDSDTSPPRRIRHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQ 215
DT SP R S+ + + R D S R HD+ S R GD
Sbjct: 783 KQDTKSDSP----RLKSERAEALKQRPDGRSVSESLRRDHDNKQKSDDRGESERHRGDQS 838
Query: 216 KATDSDLSSPRHKQSPGHQDSDSDLSPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPP 275
+ + + G + S + RH S DS P Q+++ P
Sbjct: 839 RVRRPETLRSSSRNEHGIKSDSSKTDKLERKHRHESGDSRERPSSGEQKSRPDS-----P 893
Query: 276 RRSQPPGKKAAHMYSGAKTGLVLTDIQREQQELKEQDQETMAFEAEFQYAETVFRDKSGR 335
R Q K+ G K+ D +R + + D + + ++ + +SG
Sbjct: 894 RVKQGDSNKSRSDKLGFKSP-TSKDDKRTEGNKSKVDTNKAHPDNKAEFPSYLLGGRSGA 952
Query: 336 KRNLKLERLEQRRKAEKDSERDELYAQWGKGLAQSRQQQQNVEDAMKEMQKPLA--RYID 393
+N + ++++ + E ++ KG + + ++ + + + + KP+ + +
Sbjct: 953 LKNFVIPKIKRDKDGNVTQETKKMEM---KGEPKDKVEKIGLVEDLNKGAKPVVVLQKLS 1009
Query: 394 DEDLDRMLREQEREGDPMANFIKKNKAKENK 424
+D+ ++++++E + IK +K NK
Sbjct: 1010 LDDVQKLIKDREDKSRSSLKPIKNKPSKSNK 1040
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 60.1 bits (144), Expect = 4e-09
Identities = 72/270 (26%), Positives = 97/270 (35%), Gaps = 36/270 (13%)
Query: 4 APPLSKAEYLKRYLSGADAGVDRGSESGRKRRKKRPKPG---GAGGKGMRIVDDDVSWTA 60
APP + L R S +D+G RG+ P+PG G GG G R +
Sbjct: 414 APPRGSSRSLSRARSSSDSGSGRGAPG------PGPEPGSERGHGGHGKRAKERPPRARP 467
Query: 61 ISTTKLEKEEEEDDGDLPVVAEFVDERPEEVKQMEAFRSSAKWKLLGGHNEDLPSNRHFR 120
ST+ G PE +SS++ G H S+R
Sbjct: 468 ASTSPSPGAHGRRGG------------PEG-------KSSSRSP--GPHPRSWSSSRSPS 506
Query: 121 HDTPDSSPRRVRHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRRI 180
S+ +R + PSP+K D RARH + + R R SP R+
Sbjct: 507 KSRSRSAEKRPHSPSRSPSPKKPLSRDKD-GEGRARHSEAEAT--RARRRSRSYSPIRKR 563
Query: 181 RHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSDSDL 240
R DS PRR P P RP +SS C SD S+ H +SP S
Sbjct: 564 RRDSPSFMEPRRITSARKRPIPYYRPSPSSSSSC---LSSDYSTRSHSRSPSPGHSHGSY 620
Query: 241 SPPRNRPRHRSSDSDLSPPRRRQRTKSSDS 270
S + R R+ +P SS+S
Sbjct: 621 SSRSHGTRSRTRSPSRTPSPSYHSRSSSES 650
Score = 48.1 bits (113), Expect = 2e-05
Identities = 49/175 (28%), Positives = 59/175 (33%), Gaps = 14/175 (8%)
Query: 114 PSNRHFRHDTPDSSPRRVRHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSD 173
P + H D P S RVR +P PSPR A G
Sbjct: 328 PGSAHSPPDKPSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGRGGRAAGGAGRRR 387
Query: 174 TSPPRRIRHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGH 233
RR R SS ++P RR R P P+PPR + S + + SD S R PG
Sbjct: 388 RRRRRRRRSRSSASAPRRRGRR-RPRPAPPRGSSRSLS---RARSSSDSGSGRGAPGPGP 443
Query: 234 QDSD----------SDLSPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRS 278
+ + PPR RP S R KSS P RS
Sbjct: 444 EPGSERGHGGHGKRAKERPPRARPASTSPSPGAHGRRGGPEGKSSSRSPGPHPRS 498
Score = 43.5 bits (101), Expect = 4e-04
Identities = 59/239 (24%), Positives = 92/239 (38%), Gaps = 27/239 (11%)
Query: 58 WTAISTTKLEKEEEEDDGDLPVVAEFVDERPEEVKQMEAFRSSAKWKLLGGHNEDLPSNR 117
W++ S + K++++ G R + +++E+ S L + + +R
Sbjct: 159 WSSSSASPPPKKKKKKKGG--------HRRSRKKRRLESECSCGSSSPLRKKKKSVKKHR 210
Query: 118 HFRHDTPDSSPRRVRHGTP-----DPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDS 172
R D+ RR R + + + K R T P R RH + + H S
Sbjct: 211 RDRSDSGSRRKRRHRSRSSKCKRKEKNKEKKRPHTESPGRRSHRHSSGSSHSPSLSSHYS 270
Query: 173 DTSPPRRI----RHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHK 228
D+ P R+ R + T R + SP PS + G Q+ S S H
Sbjct: 271 DSRSPSRLSPKHRDEGRKTGSQRSSGSRSPSPS-----GGSGWGSPQRNGGSGQRSGAHG 325
Query: 229 QSPGHQDSDSDL-SPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKKAA 286
PG S D S P R R +++ + +PP R K S S S P SQ G +AA
Sbjct: 326 GRPGSAHSPPDKPSSPSPRVRDKAAAAAPTPP---ARGKESPSPRSAP-SSQGRGGRAA 380
Score = 38.1 bits (87), Expect = 0.018
Identities = 50/190 (26%), Positives = 70/190 (36%), Gaps = 24/190 (12%)
Query: 109 HNEDLPSNRHFRHDTPDSSPRRVRHGTPDPSPRKDRHDTPDPS-------PRRARHDTPD 161
H+ L S+ SP+ G S R +P PS P+R +
Sbjct: 261 HSPSLSSHYSDSRSPSRLSPKHRDEGRKTGSQRSSGSRSPSPSGGSGWGSPQR-NGGSGQ 319
Query: 162 PSPLRGARHDSDTSPPRRIRHDSSDTSPPRRARHDSPDPSPPRR------PQHNSSGDCQ 215
S G R S SPP + S SP R + + P+PP R P+ S +
Sbjct: 320 RSGAHGGRPGSAHSPPDK----PSSPSPRVRDKAAAAAPTPPARGKESPSPRSAPSSQGR 375
Query: 216 KATDSDLSSPRHKQSPGHQDSDSDLSPPRNRPRHRSSDSDLSPPRRRQRTKS---SDSDL 272
+ + R ++ + S S S PR R R R +PPR R+ S S SD
Sbjct: 376 GGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGRRRPRP---APPRGSSRSLSRARSSSDS 432
Query: 273 SPPRRSQPPG 282
R + PG
Sbjct: 433 GSGRGAPGPG 442
Score = 33.5 bits (75), Expect = 0.44
Identities = 29/110 (26%), Positives = 44/110 (40%), Gaps = 4/110 (3%)
Query: 179 RIRH-DSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSD 237
R +H SS SPP + + R + +C + S L + K H+
Sbjct: 155 RTKHWSSSSASPPPKKKKKKKGGHRRSRKKRRLESECSCGSSSPLRK-KKKSVKKHRRDR 213
Query: 238 SDLSPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKKAAH 287
SD S R + RHRS S + + K ++ SP RRS ++H
Sbjct: 214 SD-SGSRRKRRHRSRSSKCKRKEKNKEKKRPHTE-SPGRRSHRHSSGSSH 261
>gi|153251865 hypothetical protein LOC84226 [Homo sapiens]
Length = 1984
Score = 58.9 bits (141), Expect = 1e-08
Identities = 56/195 (28%), Positives = 73/195 (37%), Gaps = 30/195 (15%)
Query: 119 FRHDTPDSSPRRVRHGTP-----DPSPRKDR------HDTPDP----SPRRARHDTPDPS 163
+R TP R RH PS R R H +P SP R H +P
Sbjct: 1545 YRERTPRGPSERTRHNPSWRNHRSPSERSQRSSLERRHHSPSQRSHCSPSRKNHSSPSER 1604
Query: 164 PLRGARHDSDTSPPRRIRHDSSDT---SP-------PRRARHDSPDPSPPRRPQHNSSGD 213
R + SPP R H S+ SP P + RH SP R P S
Sbjct: 1605 SWRSPSQRNHCSPPERSCHSLSERGLHSPSQRSHRGPSQRRHHSPSERSHRSPSERSH-- 1662
Query: 214 CQKATDSDLSSPRHKQSPGHQDSDSDLSPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLS 273
+ +++ SP + G + S SP R R S S P RR + S S S
Sbjct: 1663 -RSSSERRHRSPSQRSHRGPSER-SHCSPSERRHRSPSQRSHRGPSERRHHSPSKRSHRS 1720
Query: 274 PPRRS-QPPGKKAAH 287
P RRS + P +++ H
Sbjct: 1721 PARRSHRSPSERSHH 1735
Score = 55.1 bits (131), Expect = 1e-07
Identities = 59/202 (29%), Positives = 77/202 (38%), Gaps = 24/202 (11%)
Query: 114 PSNRHFRHDTPDS--SPRRVRHGTPDP----SPRKDRHDTPDP----SPRRARHDTPDPS 163
PS R R + S SP RH +P P + RH +P SP R H +P
Sbjct: 1673 PSQRSHRGPSERSHCSPSERRHRSPSQRSHRGPSERRHHSPSKRSHRSPARRSHRSPSER 1732
Query: 164 PLRGARHDSDTSPPRRIRHDSSDTS--PPRRARHDSPDPSPPRRP---QHNSSGDCQKAT 218
S SP R H S+ S P H SP R P +H+S + +
Sbjct: 1733 SHHSPSERSHHSPSERRHHSPSERSHCSPSERSHCSPSERRHRSPSERRHHSPSEKSHHS 1792
Query: 219 DSDLS----SPRHKQSPGHQDSDSDLS----PPRNRPRHRSSDSDLSPPRRRQRTKSSDS 270
S+ S S R + SP + S L P R HRS + R + S S
Sbjct: 1793 PSERSHHSPSERRRHSPLERSRHSLLERSHRSPSERRSHRSFERSHRRISERSHSPSEKS 1852
Query: 271 DLSPPRRSQ-PPGKKAAHMYSG 291
LSP RS+ P ++ H SG
Sbjct: 1853 HLSPLERSRCSPSERRGHSSSG 1874
Score = 46.2 bits (108), Expect = 7e-05
Identities = 48/185 (25%), Positives = 68/185 (36%), Gaps = 13/185 (7%)
Query: 114 PSNRHFRHDTPDS--SPRRVRHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRG---A 168
PS R R + S S RH +P + + SP RH +P RG
Sbjct: 1649 PSERSHRSPSERSHRSSSERRHRSPSQRSHRGPSERSHCSPSERRHRSPSQRSHRGPSER 1708
Query: 169 RHDSDTSPPRRIRHDSSDTSPPRRARHDSPDPS--PPRRPQHNSSGDCQKATDSDLS--- 223
RH S + R S SP R+ H + S P +H+S + + S+ S
Sbjct: 1709 RHHSPSKRSHRSPARRSHRSPSERSHHSPSERSHHSPSERRHHSPSERSHCSPSERSHCS 1768
Query: 224 -SPRHKQSPGHQDSDSDLSPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPPG 282
S R +SP + S + P RS S R +S S L RS P
Sbjct: 1769 PSERRHRSPSERRHHSPSEKSHHSPSERSHHSPSERRRHSPLERSRHSLLERSHRS--PS 1826
Query: 283 KKAAH 287
++ +H
Sbjct: 1827 ERRSH 1831
Score = 45.4 bits (106), Expect = 1e-04
Identities = 53/218 (24%), Positives = 70/218 (32%), Gaps = 28/218 (12%)
Query: 88 PEEVKQMEAFRSSAKWKLLGGHNEDLPSNRHFRHDTPDSSPRRVRHGTPDPSPRKDRHDT 147
P E + + S + H + H + SP RH +P +
Sbjct: 1705 PSERRHHSPSKRSHRSPARRSHRSPSERSHHSPSERSHHSPSERRHHSPSERSHCSPSER 1764
Query: 148 PDPSPRRARHDTPDPSPLRGARHDSDTSPPRRIRHDSSDT---SPPRRARH---DSPDPS 201
SP RH +P S SP R H S+ SP R+RH + S
Sbjct: 1765 SHCSPSERRHRSPSERRHHSPSEKSHHSPSERSHHSPSERRRHSPLERSRHSLLERSHRS 1824
Query: 202 PPRRPQHNSSGDCQKATDSDLSSPRHKQ--SP------------GHQDSDSDLSPPRNRP 247
P R H S + SP K SP GH S P R
Sbjct: 1825 PSERRSHRSFERSHRRISERSHSPSEKSHLSPLERSRCSPSERRGHSSSGKTCHSPSER- 1883
Query: 248 RHRSSD-------SDLSPPRRRQRTKSSDSDLSPPRRS 278
HRS S+ S +RT+ S S++ P R S
Sbjct: 1884 SHRSPSGMRQGRTSERSHRSSCERTRHSPSEMRPGRPS 1921
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 56.6 bits (135), Expect = 5e-08
Identities = 80/412 (19%), Positives = 153/412 (37%), Gaps = 47/412 (11%)
Query: 24 VDRGSESGRKRRKKRPKPGGAGGKGMRIVDDDVSWTAISTTKLEKEEEEDDGDLPVVAEF 83
V R + +G + +++P GG+ R + A K EK+++E + + A
Sbjct: 379 VHRCAPAGERGERRKPNAGGSPAPVRRRPE------ASPVQKKEKKDKERENEKEKSAL- 431
Query: 84 VDERPEEVKQMEAFRSSAKWKLLGGHNEDLPSNRHFRHDTPDSSPRRVRHGTPDPSPR-- 141
R +K+ ++ +S + +L +L R +P +S R P P P
Sbjct: 432 --ARERSLKKRQSLPASPRARLSASTASELSPKSKARPSSPSTSWHRPASPCPSPGPGHT 489
Query: 142 ------KDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRRIRHDSSDTSP--PRRA 193
R T P R R + SP D S RR ++ +P P +
Sbjct: 490 LPPKPPSPRGTTASPKGRVRRKEEAKESPSAAGPEDKSQSK-RRASNEKESAAPASPAPS 548
Query: 194 RHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSDSDLSPPRNRPRHRSSD 253
SP P+PP++ Q + A + +P +P S P R
Sbjct: 549 PAPSPTPAPPQKEQPPAETPTDAAVLTSPPAPAPPVTP---------SKPMAGTTDREEA 599
Query: 254 SDLSPPRRRQRTKSSDSDLSPPRRSQPPGKKAAHMYSGAKTGLVLTDIQREQQELKEQDQ 313
+ L +RRQ + + + R K+ RE+Q +E +
Sbjct: 600 TRLLAEKRRQAREQREREEQERRLQAERDKR-----------------MREEQLAREAEA 642
Query: 314 ETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQRRKAEKDSERDELYAQWGKGLAQSRQQ 373
EAE + E + + + ERL+++++ + R+E Q + +QQ
Sbjct: 643 RAER-EAEARRREEQEAREKAQAEQEEQERLQKQKEEAEARSREEAERQRLEREKHFQQQ 701
Query: 374 QQNVEDAMKEMQKPLARYIDDEDLDRMLREQEREGDPMANFIKKNKAKENKN 425
+Q ++ K +++ + R E + ++ +E + + + KA E ++
Sbjct: 702 EQERQERRKRLEEIMKRTRKSEVSETKQKQDSKEANANGSSPEPVKAVEARS 753
Score = 49.3 bits (116), Expect = 8e-06
Identities = 46/189 (24%), Positives = 73/189 (38%), Gaps = 7/189 (3%)
Query: 188 SPPRRARHDSPDPSPPRRPQHNSSGDCQKATDSDL-SSPRHKQSPGHQDSDSDLSPPRNR 246
+PP DPSPP P D T + ++ KQ P +S S PR
Sbjct: 21 TPPEPRPSPEGDPSPPPPPMSALVPDTPPDTPPAMKNATSSKQLPLEPESPSGQVGPRPA 80
Query: 247 PRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKKAAHMYSGAKTGLVLTDIQREQQ 306
P S S + R D PPRRS P A T + +
Sbjct: 81 PPQEESPSSEAKSRGPTPPAMGPRDARPPRRSSQPSPTAVPASDSPPTKQEVKKAGERHK 140
Query: 307 ELKEQDQETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQRRKAEKDSERDELYAQWGKG 366
KE+ +E + A + V+ +K + + L+ ++L++RR+ E L A+ +
Sbjct: 141 LAKERREERAKYLAA---KKAVWLEKEEKAKALREKQLQERRRR---LEEQRLKAEQRRA 194
Query: 367 LAQSRQQQQ 375
+ RQ+Q+
Sbjct: 195 ALEERQRQK 203
Score = 44.7 bits (104), Expect = 2e-04
Identities = 57/233 (24%), Positives = 94/233 (40%), Gaps = 31/233 (13%)
Query: 148 PDPSPRRARHDTPDPSPLRGARHDSDTSPPRRIRHDSSDTSPPRRARHDS----PDPSPP 203
P+P P +P P P+ D+ P +++ +S P S P P+PP
Sbjct: 23 PEPRPSPEGDPSPPPPPMSALVPDTPPDTPPAMKNATSSKQLPLEPESPSGQVGPRPAPP 82
Query: 204 RRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSDSDLSPPRNRPRHRSSDSDLSPPRRRQ 263
+ +S + T + PR + P S + P +SD SPP +++
Sbjct: 83 QEESPSSEAKSRGPTPPAM-GPRDARPPRRSSQPSPTAVP-------ASD---SPPTKQE 131
Query: 264 RTKSSDSDLSPPRRSQPPGKKAAHMYSGAKTGLVLTDIQREQQELKEQDQETMAFEAEFQ 323
K+ + R + K Y AK + L + + + + L+E+ + E Q
Sbjct: 132 VKKAGERHKLAKERREERAK-----YLAAKKAVWL-EKEEKAKALREKQLQERRRRLEEQ 185
Query: 324 YAETVFRDKSGRKRNLKLERLEQRRKAEKDSERDELYAQWG--KGLAQSRQQQ 374
R K+ ++R ER QR+K EK+ ER E Q K A+ RQQ+
Sbjct: 186 ------RLKAEQRRAALEER--QRQKLEKNKERYEAAIQRSVKKTWAEIRQQR 230
>gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]
Length = 330
Score = 56.2 bits (134), Expect = 6e-08
Identities = 64/241 (26%), Positives = 98/241 (40%), Gaps = 43/241 (17%)
Query: 11 EYLKRYLSGADAGVDRGSESGRKRRKKRPKPGGAGGKGMRIVDDDVSWTA------ISTT 64
EY++R S + E GRK++K R K G + D + +S
Sbjct: 113 EYIEREESDGEY-----DEFGRKKKKYRGKAVGPASILKEVEDKESEGEEEDEDEDLSKY 167
Query: 65 KLEKEEEEDDGDLPVVAEFVDERPEEVKQMEAFRSSAKWKLLGGHNEDLPSNRHFRHDTP 124
KL+++E+EDD DL E + K+ RS +K + + H R +
Sbjct: 168 KLDEDEDEDDADLSKYNLDASEEEDSNKKKSNRRSRSKSR-----------SSHSRSSSR 216
Query: 125 DSSPRRVRHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDT------SPPR 178
SSP R S + R + S R+R + + S RG++ S + S PR
Sbjct: 217 SSSPSSSR------SRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRSSSRSHRGSSSPR 270
Query: 179 RIRHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQK-ATDSDLSSPRHKQSPGHQDSD 237
+ + SS +SP R + R + +SSGD +K T S RH+ S G S
Sbjct: 271 KRSYSSSSSSPERNRKRS--------RSRSSSSGDRKKRRTRSRSPERRHRSSSGSSHSG 322
Query: 238 S 238
S
Sbjct: 323 S 323
Score = 37.4 bits (85), Expect = 0.031
Identities = 31/120 (25%), Positives = 45/120 (37%), Gaps = 3/120 (2%)
Query: 178 RRIRHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSD 237
RR R S + +R SP S R + S ++ S R + S
Sbjct: 200 RRSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRSS 259
Query: 238 SDLSPPRNRPRHRSSDSDLSPP---RRRQRTKSSDSDLSPPRRSQPPGKKAAHMYSGAKT 294
S + PR RS S S P R+R R++SS S RR++ + H S +
Sbjct: 260 SRSHRGSSSPRKRSYSSSSSSPERNRKRSRSRSSSSGDRKKRRTRSRSPERRHRSSSGSS 319
Score = 30.8 bits (68), Expect = 2.9
Identities = 32/157 (20%), Positives = 56/157 (35%), Gaps = 7/157 (4%)
Query: 219 DSDLSSPRHKQSPGHQDSDSDLSPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRS 278
D DLS ++K + D+DLS N DS+ RR R+KS S RS
Sbjct: 161 DEDLS--KYKLDEDEDEDDADLSK-YNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSSRS 217
Query: 279 QPPGKKAAHMYSGAKTGLVLTDIQREQQELKEQDQETMAFEAEFQYAETVFRDKSGRKRN 338
P + S +++ R + + + + + + + + S RKR+
Sbjct: 218 SSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRSSSRSHRGS----SSPRKRS 273
Query: 339 LKLERLEQRRKAEKDSERDELYAQWGKGLAQSRQQQQ 375
R ++ R K +SR ++
Sbjct: 274 YSSSSSSPERNRKRSRSRSSSSGDRKKRRTRSRSPER 310
>gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]
Length = 715
Score = 55.8 bits (133), Expect = 8e-08
Identities = 93/412 (22%), Positives = 151/412 (36%), Gaps = 52/412 (12%)
Query: 25 DRGSESGRKRRKKRPKPGGAGGKGMRIVDDDVSWTAISTTKLEK-----EEEEDDGDLPV 79
+R R KK +P G G G +++ T ST K + +E+ D P
Sbjct: 182 ERSDSQPRNLSKKSYRPPGGSGIGR---SSELAVTP-STAKCQTPTGIPSKEKSDNPSPS 237
Query: 80 VAEFVDER-----PEEVKQMEAFRSSAKWKLLGGHNEDLPSNRHFRHDTPDSSPRRVRHG 134
+ V P K S++ K +N+ +R H + SPRR R G
Sbjct: 238 SSRKVKSYGQMIIPSREKSYSPTEMSSRVK---SYNQASTRSRPQSH-SQSRSPRRSRSG 293
Query: 135 TPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRRIRHDSSDTSPPRRAR 194
+ + + R + + RAR T + RH S + + S T PRR R
Sbjct: 294 SQKRTHSRVRSHSWKRNHSRARSRTRKGILSQMGRHSQSRSHSKGKSQNQSRT--PRRGR 351
Query: 195 HDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQ--------DSDSDLSPPRNR 246
+ +P + H+ S K D SS K+S Q D SP + R
Sbjct: 352 SHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKESGRSQSGSPNKQRDHSRSRSPNKAR 411
Query: 247 PRHRSSDSDLSPPRRRQRTKSSDSDLSPPR---------RSQPPGKKAAHMYSGAKTGLV 297
R RS + R R R+ + D S R RS+ P K H S +++
Sbjct: 412 DRSRSRSPYKARDRSRSRSPNKARDCSRSRSPYKARDRSRSRSPNKARDH--SRSRSPNK 469
Query: 298 LTDIQREQQELKEQDQETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQRRKAEKDSERD 357
D R + KE+D + + +++ R+ + + R+ ERD
Sbjct: 470 ARDRSRSRSPSKERDHSQLGSPS---------KERDHRRSRSPSKERQCRQSRSSSKERD 520
Query: 358 ELYAQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDRMLREQEREGD 409
+ + ++ RQ++Q+ KE + +R +E R R +E D
Sbjct: 521 H---RRSRSPSKERQRRQS-RSPNKERDRSQSRSPSEEREHRQSRSPSKERD 568
Score = 50.4 bits (119), Expect = 4e-06
Identities = 67/286 (23%), Positives = 102/286 (35%), Gaps = 30/286 (10%)
Query: 92 KQMEAFRSSAKWKLLGGHNEDLPSNR--HFRHDTPDSSPRRVRHGTPDPSPRKDRHDTPD 149
K + RS + +K P+ H R +P+ + R R + PS +D
Sbjct: 433 KARDCSRSRSPYKARDRSRSRSPNKARDHSRSRSPNKARDRSR--SRSPSKERDHSQLGS 490
Query: 150 PSPRRARHDTPDPSPLRGARHDSDTSPPRRIRHDSSDTSPPRRARHDSPDPSPPRRPQHN 209
PS R + PS R R +S R R S + +R + SP+ R
Sbjct: 491 PSKERDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSKERQRRQSRSPNKERDR----- 545
Query: 210 SSGDCQKATDSDLSSPRHKQSPG-HQDSDSDLSPPRNRPRHRSSDSDLSPPRRRQRTKSS 268
Q + S+ R +SP +D SP + R R +S S R R+ +
Sbjct: 546 ----SQSRSPSEEREHRQSRSPSKERDRRRWRSPSKERERRQSRSSSEERDHSRSRSPNK 601
Query: 269 DSDLSPPRRSQPPGKKAAHMYSGAKTGLVLTDIQREQQELKEQDQETMAFEAEFQYAETV 328
S S PR S K+ AH S ++T + + + KE D TV
Sbjct: 602 QSGYSRPRAS---SKEKAH--SRSRTPSKEGNHSQSRTSSKESDPS----------QSTV 646
Query: 329 FRDKSGRKRNLKLERLEQRRKAEKDSERD-ELYAQWGKGLAQSRQQ 373
R ++ + L Q R K S + G+ L+Q Q
Sbjct: 647 PRSPDWKRSPTRTSSLSQNRTPSKTSSHSPSTFPSGGQTLSQDDSQ 692
Score = 42.4 bits (98), Expect = 0.001
Identities = 58/231 (25%), Positives = 84/231 (36%), Gaps = 34/231 (14%)
Query: 70 EEEDDGDLPVVAEFVDER----PEEVKQMEAFRSSAKWKLLGGHNEDLPSNRHFRHDTPD 125
+E D L ++ D R P + +Q RSS+K H R +P
Sbjct: 481 KERDHSQLGSPSKERDHRRSRSPSKERQCRQSRSSSK------------ERDHRRSRSP- 527
Query: 126 SSPRRVRHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRRIRHDSS 185
S R R + P+ +DR + PS R + PS R R S R R S
Sbjct: 528 -SKERQRRQSRSPNKERDRSQSRSPSEEREHRQSRSPSKERDRRRWRSPSKERERRQSRS 586
Query: 186 DTSPPRRARHDSPDP-SPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSDSDLSPPR 244
+ +R SP+ S RP+ +S + + H QS + S S P
Sbjct: 587 SSEERDHSRSRSPNKQSGYSRPRASSKEKAHSRSRTPSKEGNHSQSR----TSSKESDPS 642
Query: 245 NRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKKAAHMYSGAKTG 295
RS D SP R S LS +++ P K ++H S +G
Sbjct: 643 QSTVPRSPDWKRSPTRT--------SSLS---QNRTPSKTSSHSPSTFPSG 682
Score = 35.0 bits (79), Expect = 0.15
Identities = 40/171 (23%), Positives = 59/171 (34%), Gaps = 18/171 (10%)
Query: 126 SSPRRVRHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRRIRHDSS 185
SSP+R + +P T DP P + T +P R + P R+
Sbjct: 2 SSPKRSSKPSMSLAPSGSSMPTADPKPPASLKSTKSATPNRSL----VPTKPATSRNSVM 57
Query: 186 DTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSDSDLSPPRN 245
S + + S +P RP S + T S +S+ S S R
Sbjct: 58 SPSSSKSTKSTSTKRAPSNRPSSRSRVRSKARTPSRVSTDTRTSKA------SKASDVRC 111
Query: 246 RPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKKAAHMYSGAKTGL 296
R + +P RR R S P R+ PG+ H GA+ G+
Sbjct: 112 HQRRGTHSRGRTPGRRGSR-----SSKRSPSRASTPGRIRTH---GARPGM 154
Score = 29.6 bits (65), Expect = 6.4
Identities = 46/210 (21%), Positives = 74/210 (35%), Gaps = 43/210 (20%)
Query: 123 TPDSSPRRVRHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRRIRH 182
TP S + R G PR + D PR + P G S+ +
Sbjct: 160 TPTSQQKGSR-GKSYGRPRTSNRERSDSQPRNLSKKSYRPPGGSGIGRSSELAVTPSTAK 218
Query: 183 DSSDTSPPRRARHDSPDPSPPRRPQ--------------------------HNSSGDCQK 216
+ T P + + D+P PS R+ + + +S +
Sbjct: 219 CQTPTGIPSKEKSDNPSPSSSRKVKSYGQMIIPSREKSYSPTEMSSRVKSYNQASTRSRP 278
Query: 217 ATDSDLSSPRHKQSPGHQDSDSDL---SPPRN--RPRHRSSDSDLSPPRRRQRTKS---- 267
+ S SPR +S + + S + S RN R R R+ LS R +++S
Sbjct: 279 QSHSQSRSPRRSRSGSQKRTHSRVRSHSWKRNHSRARSRTRKGILSQMGRHSQSRSHSKG 338
Query: 268 -SDSDLSPPRR------SQPPGKKAAHMYS 290
S + PRR S+ P K+ +H +S
Sbjct: 339 KSQNQSRTPRRGRSHNWSRNPSKERSHSHS 368
>gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens]
Length = 1564
Score = 55.1 bits (131), Expect = 1e-07
Identities = 82/380 (21%), Positives = 152/380 (40%), Gaps = 21/380 (5%)
Query: 65 KLEKEEEEDDGDLPVVAEFVDER-PEEVKQMEAFRSSAKWKLLGGHNE--DLPSNRHFRH 121
K +EE E + D + D+R P + + R + + L + D R +
Sbjct: 428 KDSREEREYEQDQSSSRDHRDDREPRDGRDRRDARDTRDRRELRDSRDMRDSREMRDYSR 487
Query: 122 DTPDSSPRRVRHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRRIR 181
DT +S R T D +DR R P+ S G H + S IR
Sbjct: 488 DTKESRDPRDSRSTRDAHDYRDREGR---DTHRKEDTYPEESRSYGRNHLREESSRTEIR 544
Query: 182 HDSSDTSPP--RRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDS--D 237
++S + S R R P P+ S G DS S+ + S + S +
Sbjct: 545 NESRNESRSEIRNDRMGRSRGRVPELPEKGSRGSRGSQIDSHSSNSNYHDSWETRSSYPE 604
Query: 238 SDLSPPR-NRPRHRSSDSDLSPPRRRQR-TKSSDSDLSPPRRSQPPGKKAAHMYSGAKTG 295
D P R NR + R S + R +R + D S P R Q + +
Sbjct: 605 RDRYPERDNRDQARDSSFERRHGERDRRDNRERDQRPSSPIRHQGRNDELERDERREERR 664
Query: 296 LVLTDIQREQQELKEQDQETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQR---RKAEK 352
+ D +R+++ +E+D+E + E + ++R L+ ER +R R+ E+
Sbjct: 665 VDRVDDRRDERA-RERDRERERDRERERERERERDREREKERELERERAREREREREKER 723
Query: 353 DSERD-----ELYAQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDRMLREQERE 407
D ERD + + + + +++++ E+ +E ++ R + E RE+++E
Sbjct: 724 DRERDRDRDHDRERERERERDREKEREREREERERERERERERERERERERERARERDKE 783
Query: 408 GDPMANFIKKNKAKENKNKK 427
+ ++ K+K ++++ +K
Sbjct: 784 RERQRDWEDKDKGRDDRREK 803
Score = 51.6 bits (122), Expect = 2e-06
Identities = 89/392 (22%), Positives = 139/392 (35%), Gaps = 55/392 (14%)
Query: 88 PEEVKQMEAFRSSAKWKLLGGHNEDLPSNRHFRH-----DTP-----DSSPRRVRHGTPD 137
P+ + RS + K G H+ + S H R DT + R R D
Sbjct: 382 PQRKQSPPRHRSPMREK--GRHDHERTSQSHDRRHERREDTRGKRDREKDSREEREYEQD 439
Query: 138 PSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRRIRHDSSDTSPPRRARHDS 197
S +D D +P R R D D R R D R +R S DT R R DS
Sbjct: 440 QSSSRDHRDDREPRDGRDRRDARDTRDRRELRDSRDMRDSREMRDYSRDTKESRDPR-DS 498
Query: 198 PDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPG--HQDSDSDLSPPRNRPRHRSSDSD 255
+ D + D + P +S G H +S + RN R+ S
Sbjct: 499 RSTRDAHDYRDREGRDTHRKED---TYPEESRSYGRNHLREESSRTEIRNESRNESRSEI 555
Query: 256 LSPPRRRQRTKSSDSDLSPPRRSQPPGKKAAHMYSGAKTGLVLTDIQREQQELKEQDQET 315
+ R R + + R S+ + S E+ E+D
Sbjct: 556 RNDRMGRSRGRVPELPEKGSRGSRGSQIDSHSSNSNYHDSWETRSSYPERDRYPERDNRD 615
Query: 316 MAFEAEFQ--YAETVFRDKSGRK-----------RNLKL---ERLEQRRKAEKDSERDEL 359
A ++ F+ + E RD R RN +L ER E+RR D RDE
Sbjct: 616 QARDSSFERRHGERDRRDNRERDQRPSSPIRHQGRNDELERDERREERRVDRVDDRRDER 675
Query: 360 YAQWGKGLAQSRQQQQNVE-------DAMKEMQKPLARYID-------------DEDLDR 399
+ + + R++++ E + +E+++ AR + D D DR
Sbjct: 676 ARERDRERERDRERERERERERDREREKERELERERAREREREREKERDRERDRDRDHDR 735
Query: 400 MLREQEREGDPMANFIKKNKAKENKNKKVRPR 431
RE+ERE D ++ + +E + ++ R R
Sbjct: 736 E-RERERERDREKEREREREERERERERERER 766
Score = 48.9 bits (115), Expect = 1e-05
Identities = 88/448 (19%), Positives = 153/448 (34%), Gaps = 64/448 (14%)
Query: 11 EYLKRYLSGADAGVDRGSESGRKRRKKRPKPGGAGGKGMRIVDDDVSWTAISTTKLEKEE 70
EY + S D DR GR RR R + R + D S E +
Sbjct: 435 EYEQDQSSSRDHRDDREPRDGRDRRDARDTRDRRELRDSRDMRDSREMRDYSRDTKESRD 494
Query: 71 EEDDGDLPVVAEFVDERPEEVKQMEAFRSSAKWKLLGGHNEDLPSNRHFRHDTPDSSPRR 130
D ++ D + + E H + S R+++ + S
Sbjct: 495 PRDSRSTRDAHDYRDREGRDTHRKEDTYPEESRSYGRNHLREESSRTEIRNESRNESRSE 554
Query: 131 VRHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRRIRHDSSDTSPP 190
+R+ S R + P+ R +R D HDS + R + D P
Sbjct: 555 IRNDRMGRS-RGRVPELPEKGSRGSRGSQIDSHSSNSNYHDSWET---RSSYPERDRYPE 610
Query: 191 RRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSDS-------DLSPP 243
R R + D S RR D ++ S RH+ + D D
Sbjct: 611 RDNRDQARDSSFERRHGERDRRDNRERDQRPSSPIRHQGRNDELERDERREERRVDRVDD 670
Query: 244 RNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKKAAHMYSGAKTGLVLTDIQR 303
R R R D + R R+R + + D + + ++A +R
Sbjct: 671 RRDERARERDRERERDRERERERERERDREREKERELERERAR---------------ER 715
Query: 304 EQQELKEQDQETMAFEAEFQYAETVFRDKSG---RKRNLKLERLEQRRKAEKDSERDELY 360
E++ KE+D+E RD+ R+R + +R ++R + ++ ER+
Sbjct: 716 EREREKERDRERD-------------RDRDHDRERERERERDREKEREREREERERER-- 760
Query: 361 AQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDRMLREQEREGDPMANFIKKNKA 420
+ + ++++ + +E K R D ED D+ R+ RE K+ +
Sbjct: 761 ----ERERERERERERERERARERDKERERQRDWEDKDKG-RDDRRE--------KREEI 807
Query: 421 KENKN-------KKVRPRYSGPAPPPNR 441
+E++N +K + RY P R
Sbjct: 808 REDRNPRDGHDERKSKKRYRNEGSPSPR 835
Score = 45.4 bits (106), Expect = 1e-04
Identities = 67/351 (19%), Positives = 128/351 (36%), Gaps = 28/351 (7%)
Query: 55 DVSWTAISTTKLEKEEEEDDGDL-PVVAEFVDERPEEVKQMEAFRSSAKWKLLGGHNEDL 113
D+++ + LE + ++ +L + E +++R E + + E + KL +
Sbjct: 155 DINYDYVHELSLEMKRQKIQRELMKLEQENMEKREEIIIKKEVSPEVVRSKLSPSPSLRK 214
Query: 114 PSNRHFRHDTPDSSP--RRVRHGTPDPSPRKD--RHDTPDPSPRRARHDTPDPSPLR--- 166
S R +P SS ++ R + SP D R+ + S ++ P P+
Sbjct: 215 SSKSPKRKSSPKSSSASKKDRKTSAVSSPLLDQQRNSKTNQSKKKGPRTPSPPPPIPEDI 274
Query: 167 --GARHDSDTSPPRRIRHDSSDTSPP------RRARHDSPDPSPPRRPQHNSSGDCQKAT 218
G ++ RI + D +R + D P + P H+ ++
Sbjct: 275 ALGKKYKEKYKVKDRIEEKTRDGKDRGRDFERQREKRDKPRSTSPAGQHHSPISSRHHSS 334
Query: 219 DSDLSSPRHKQSPGHQDSDSDLSPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRS 278
S S + SP SP R R S L+PP RR + LS P+R
Sbjct: 335 SSQSGSSIQRHSP---------SPRRKRTPSPSYQRTLTPPLRRSASPYPSHSLSSPQRK 385
Query: 279 QPPGKKAAHMYSGAKTGLVLTDIQREQQELKEQDQETMAFEAEFQYAETVFRDKSGRKRN 338
Q P + + M + T +++ + +D + E + R+
Sbjct: 386 QSPPRHRSPMREKGRHDHERTSQSHDRRHERREDTRGKRDREKDSREEREYEQDQSSSRD 445
Query: 339 LKLERLEQRRKAEKDSE--RDELYAQWGKGLAQSRQQQQNVEDAMKEMQKP 387
+ +R + + +D+ RD + + + SR+ + D KE + P
Sbjct: 446 HRDDREPRDGRDRRDARDTRDRRELRDSRDMRDSREMRDYSRDT-KESRDP 495
Score = 39.7 bits (91), Expect = 0.006
Identities = 48/243 (19%), Positives = 86/243 (35%), Gaps = 33/243 (13%)
Query: 250 RSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKKAAHMYSGAKTGLVLTDIQREQQELK 309
RS + R R + K D D P +R+ S DI+ ++
Sbjct: 76 RSPERPTGDLRERMKNKRQDVDTEPQKRNTEESSSPVRKESSRGRHREKEDIKITKERTP 135
Query: 310 EQDQETMAFEAE----------FQYAETVFRDKSGRKRNLKLERLEQRR--KAEKDSERD 357
E ++E + +E + Y + + +K +L +LEQ K E+ +
Sbjct: 136 ESEEENVEWETNRDDSDNGDINYDYVHELSLEMKRQKIQRELMKLEQENMEKREEIIIKK 195
Query: 358 ELYAQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDRMLREQEREGDPMANFIKK 417
E+ + + + + K P + +D R+ P+ + ++
Sbjct: 196 EVSPEVVRSKLSPSPSLRKSSKSPKRKSSPKSSSASKKD-----RKTSAVSSPLLD--QQ 248
Query: 418 NKAKENKNKKVRPRYSGPAPP-PNRFNIWPGYR-------------WDGVDRSNGFEQKR 463
+K N++KK PR P PP P + Y+ DG DR FE++R
Sbjct: 249 RNSKTNQSKKKGPRTPSPPPPIPEDIALGKKYKEKYKVKDRIEEKTRDGKDRGRDFERQR 308
Query: 464 FAR 466
R
Sbjct: 309 EKR 311
Score = 35.4 bits (80), Expect = 0.12
Identities = 61/287 (21%), Positives = 100/287 (34%), Gaps = 33/287 (11%)
Query: 112 DLPSNRHFRHDTPDSSPRRVRHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHD 171
D R + + R R + ++R D R R D D R R +
Sbjct: 744 DREKEREREREERERERERERERERERERERERARERDKERERQR-DWEDKDKGRDDRRE 802
Query: 172 S--DTSPPRRIRHDSSDTSPPRRARHD---SPDPSPPRRPQHNSSGDCQKATDSDLSSPR 226
+ R R + +R R++ SP SP RR +H+ D + D R
Sbjct: 803 KREEIREDRNPRDGHDERKSKKRYRNEGSPSPRQSPKRRREHSPDSDAYNSGDDKNEKHR 862
Query: 227 HKQSPGHQDSDSDLSPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKKAA 286
LS P H + D R+ R K D +P K+++
Sbjct: 863 LLSQVVRPQESRSLS-----PSHLTED-------RQGRWKEED--------RKPERKESS 902
Query: 287 HMY--SGAKTGLVLTDIQREQQELKEQDQ---ETMAFEAEFQYAETVFRDKSGRKRNLKL 341
Y K + D QREQ E+ E + + + + + ET R K+ K+
Sbjct: 903 RRYEEQELKEKVSSVDKQREQTEILESSRMRAQDIIGHHQSEDRETSDRAHDENKKKAKI 962
Query: 342 ERLEQRRKAEKD--SERDELYAQWGKGLAQSRQQQQNVEDAMKEMQK 386
++ ++K E D ER + G S ++ Q + K+ +K
Sbjct: 963 QKKPIKKKKEDDVGIERGNIETTSEDGQVFSPKKGQKKKSIEKKRKK 1009
Score = 32.3 bits (72), Expect = 0.99
Identities = 67/296 (22%), Positives = 110/296 (37%), Gaps = 36/296 (12%)
Query: 130 RVRHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRRIRHDSSDTSP 189
+++ G P S DR D+ S RR+ ++ R DS R R++
Sbjct: 1253 QLKRGEPSRSTSSDRQDSRSHSSRRSSPESDRQVHSRSGSFDSRDRLQERDRYEHD--RE 1310
Query: 190 PRRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSDSDLSPPRNRPRH 249
R R D+ R+ + + D + D R ++ +D DL R R R
Sbjct: 1311 RERERRDT------RQREWDRDADKDWPRNRDRDRLRERERERERDKRRDLD--RERERL 1362
Query: 250 RSSDSDLSPPRRRQRTKSSDSDLSPPR-RSQPPGKKAAHMYSGAKTGLVLTDIQREQQEL 308
S + R R RT S S R ++ G+ + S ++ L L D +R ++L
Sbjct: 1363 ISDSVERDRDRDRDRTFESSQIESVKRCEAKLEGEHERDLESTSRDSLAL-DKERMDKDL 1421
Query: 309 --------KEQDQETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQRRKAEKDSERDELY 360
+ + T + EA ++ G E + D E DE+
Sbjct: 1422 GSVQGFEETNKSERTESLEAGDDESKLDDAHSLGSGAGEGYEPI-------SDDELDEIL 1474
Query: 361 AQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDRMLREQEREGDPMANFIK 416
A G A+ R+ QQ+ E +M PL ID + M + + +P A +K
Sbjct: 1475 A----GDAEKREDQQDEE----KMPDPL-DVIDVDWSGLMPKHPKEPREPGAALLK 1521
>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
Length = 843
Score = 53.9 bits (128), Expect = 3e-07
Identities = 54/272 (19%), Positives = 111/272 (40%), Gaps = 35/272 (12%)
Query: 178 RRIRHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSD 237
RR R + RR R + R + + ++ D D + R + +D D
Sbjct: 309 RRERERERERERERREREREREREREREKEKERERERERDRDRDRTKERDRDRDRERDRD 368
Query: 238 SDL--SPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKKAAHMYSGAKTG 295
D S RN+ R RS + R R+R + + + R + ++ +
Sbjct: 369 RDRERSSDRNKDRSRSREKSRDRERERERERERERERERERERERERERERERERERE-- 426
Query: 296 LVLTDIQREQQELKEQDQETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQRRKAEKDSE 355
D +R+++E +E E E + + E +++ R +N ++ ++ R+ EK++E
Sbjct: 427 ---KDKKRDREEDEEDAYERRKLERKLREKEAAYQE---RLKNWEIRERKKTREYEKEAE 480
Query: 356 RDELYAQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDED---------LDRMLREQER 406
R+E ++++ + K +++ L Y DD D L + LR++E+
Sbjct: 481 REE-------------ERRREMAKEAKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREK 527
Query: 407 EGDPMANFIKKNKAKENKNKKVRPRYSGPAPP 438
E M + K ++ + +++R R P
Sbjct: 528 E---MEADERDRKREKEELEEIRQRLLAEGHP 556
Score = 34.7 bits (78), Expect = 0.20
Identities = 47/189 (24%), Positives = 82/189 (43%), Gaps = 31/189 (16%)
Query: 251 SSDSDLSPPRRRQRTKSSD-------SDLSPPRRSQPPGKKAAHMYSGAKTGLVLTDIQR 303
S +SD S PR++++ K D + L P A M K L+ +I +
Sbjct: 226 SQESD-SHPRKKKKEKKEDIFRRFPVAPLIPYPLITKEDINAIEMEED-KRDLISREISK 283
Query: 304 EQQELKEQDQETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQRRKAEKDSERDELYAQW 363
+ K+ ++E E E Q E K R+R + ER +RR+ E++ ER+ +
Sbjct: 284 FRDTHKKLEEEKGKKEKERQEIE-----KERRERERERERERERRERERERERER---ER 335
Query: 364 GKGLAQSRQQQQNVE-DAMKEMQKPLARYIDDEDLDRMLREQEREGDPMANFIKKNKAKE 422
K + R+++++ + D KE + R D + R++ER D +NK +
Sbjct: 336 EKEKERERERERDRDRDRTKERDRDRDRERDRD------RDRERSSD-------RNKDRS 382
Query: 423 NKNKKVRPR 431
+K R R
Sbjct: 383 RSREKSRDR 391
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 53.5 bits (127), Expect = 4e-07
Identities = 59/280 (21%), Positives = 111/280 (39%), Gaps = 37/280 (13%)
Query: 169 RHDSDTSPPRR---IRHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSP 225
R S SP RR H +D R R + RR + + + + +
Sbjct: 30 RPGSQESPRRRGLGQAHKDADGDDRERNRQKERER---RREKRQTERETDRKRERRREKD 86
Query: 226 RHKQSPGHQDSDSDLSPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKKA 285
RH++ H++ D R + R R +D + R RQR K + R ++ G++
Sbjct: 87 RHRKRDRHRERQRD----REKERERQTDRE----RDRQREKERNRQKERERETEREGERG 138
Query: 286 AHMYSGAKTGLVLTDIQREQQELKEQDQE-TMAFEAEFQYAETVFRDKSGRKRNLKLERL 344
TD QRE++ ++ ++E + E Q R K + + ER
Sbjct: 139 RDRQ---------TDGQRERERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERR 189
Query: 345 EQRRKAEKDSERDELYAQWGKGLAQSRQQQQNVE-------------DAMKEMQKPLARY 391
E+ R+ EK+++ ++ +++ G+ + R+ + E +E +K R
Sbjct: 190 ERERQREKENKTEDRHSERGRERERERETETETERKRQTDRERDRQRKTEREREKQAERE 249
Query: 392 IDDEDLDRMLREQEREGDPMANFIKKNKAKENKNKKVRPR 431
E +E+ERE D + ++ K +E + + R R
Sbjct: 250 RASERETERDKERERERDRDRDRDRRQKERERQTDRKRQR 289
Score = 48.5 bits (114), Expect = 1e-05
Identities = 68/337 (20%), Positives = 131/337 (38%), Gaps = 28/337 (8%)
Query: 98 RSSAKWKLLGGHNEDLPSNRHFRHDTPDSSPRRVRHGTPDPSPRK-DRHDTPDPSPRRAR 156
+ S + + LG ++D + R+ + RR + T + RK +R D +R R
Sbjct: 34 QESPRRRGLGQAHKDADGDDRERNRQKERERRREKRQTERETDRKRERRREKDRHRKRDR 93
Query: 157 HDTPDPSPLRGARHDSDTSPPRRIRHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQK 216
H R + D + R+ + R R + R + +
Sbjct: 94 H--------RERQRDREKERERQTDRERDRQREKERNRQKERERETEREGERGRD----R 141
Query: 217 ATDSDLSSPRHKQSPGHQDSDSDLSPPRNRPRHRSSDSDLSPPR--RRQRTKSSDSD-LS 273
TD R + + ++ +D R R+R + + R RR+R + + + +
Sbjct: 142 QTDGQRERERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERRERERQREKENKT 201
Query: 274 PPRRSQPPGKKAAHMYSGAKTGLV-LTDIQREQQELKEQDQETMAFEAEFQYAETVFRDK 332
R S+ ++ + +T TD +R++Q E+++E A ET RDK
Sbjct: 202 EDRHSERGRERERERETETETERKRQTDRERDRQRKTEREREKQAERERASERETE-RDK 260
Query: 333 SGRKRNLKLERLEQRRKAEKDSERDELYAQWGKGLAQSRQQQQNVEDAMKEMQKPLARYI 392
R+R +R RR+ E++ + D Q R ++ + +E Q+ R
Sbjct: 261 E-RERERDRDRDRDRRQKERERQTDR--------KRQRRTERDRETERKRERQRERERER 311
Query: 393 DDEDLDRMLREQEREGDPMANFIKKNKAKENKNKKVR 429
+ RE+ERE + ++++ KE + K+ R
Sbjct: 312 ERNRKRERERERERERERQRE-TERDREKERERKRKR 347
Score = 48.1 bits (113), Expect = 2e-05
Identities = 54/242 (22%), Positives = 104/242 (42%), Gaps = 35/242 (14%)
Query: 192 RARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSDSDLSPPRNRPRHRS 251
R R + R+ Q + D Q+ T+ + R KQ+ + S+ + + R R R
Sbjct: 212 RERERETETETERKRQTDRERDRQRKTERE----REKQAERERASERETERDKERERERD 267
Query: 252 SDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKKAAHMYSGAKTGLVLTDIQREQQELKEQ 311
D D RRQ+ + +D RR++ + T+ +RE+Q +E+
Sbjct: 268 RDRDRD---RRQKERERQTDRKRQRRTERDRE---------------TERKRERQRERER 309
Query: 312 DQE-TMAFEAEFQYAETVFRDKSGRKRNLKLERLEQRRKAEKDSERDELYAQWGKGLAQS 370
++E E E + R + + K +++R+ E D ER+ Q G+ +
Sbjct: 310 ERERNRKRERERERERERERQRETERDREKERERKRKRQTEMDRERNR---QTGR---EG 363
Query: 371 RQQQQNVEDAMKEMQKPLARYIDDEDLDR-MLREQEREGDPMANFIKKNKAKENKNKKVR 429
R+Q + + +E + AR ++ + DR R++ERE +K++ + + +K R
Sbjct: 364 RRQAERERERERERDRQSAREREERERDRDRDRQKERERQ-----TEKDRDGQRETEKQR 418
Query: 430 PR 431
R
Sbjct: 419 ER 420
Score = 46.6 bits (109), Expect = 5e-05
Identities = 63/315 (20%), Positives = 118/315 (37%), Gaps = 48/315 (15%)
Query: 130 RVRHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRRIRHDSSDTSP 189
R R + + +K+R + RR R + RH R R ++T
Sbjct: 165 RERQRQTERNRQKEREREKNRQERRERERQREKENKTEDRHSERGRERERERETETETE- 223
Query: 190 PRRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSDSDLSPPRNRPRH 249
R R + R+ + ++ S+ + R K+ +D D D R + R
Sbjct: 224 --RKRQTDRERDRQRKTEREREKQAERERASERETERDKERERERDRDRDRDR-RQKERE 280
Query: 250 RSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKKAAHMYSGAKTGLVLTDIQREQQELK 309
R +D R+RQR D + R Q + +RE++ +
Sbjct: 281 RQTD------RKRQRRTERDRETERKRERQ-------------------RERERERERNR 315
Query: 310 EQDQETMAFEAEFQYAETVFRDKS-----GRKRNLKLER-------LEQRRKAEKDSERD 357
++++E E E + RD+ RKR +++R E RR+AE++ ER+
Sbjct: 316 KRERERER-ERERERQRETERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERERE 374
Query: 358 ELYAQWGKGLAQSRQQQQNVEDAMKEMQKPLARYID-DEDLDRMLREQEREGDPMANFIK 416
+ +R++++ D ++ QK R + D D R +Q +
Sbjct: 375 R-----ERDRQSAREREERERDRDRDRQKERERQTEKDRDGQRETEKQREREKDRESERG 429
Query: 417 KNKAKENKNKKVRPR 431
+ + +E + +K R R
Sbjct: 430 RERGREREKQKGRER 444
Score = 34.3 bits (77), Expect = 0.26
Identities = 63/336 (18%), Positives = 113/336 (33%), Gaps = 25/336 (7%)
Query: 25 DRGSESGRKRRKKRPKPGGAGGKGMRIVDDDVSWTAISTTKLEKEEEEDDGDLPVVAEFV 84
DR SE GR+R ++R K + D K E+E E+
Sbjct: 203 DRHSERGRERERERETETETERKRQTDRERD------RQRKTEREREKQAERERASERET 256
Query: 85 DERPEEVKQMEAFRSSAKWKLLGGHNEDLPSNRHFRHDTPDSSPR---RVRHGTPDPSPR 141
+ E ++ + R + + D R D R R R + + +
Sbjct: 257 ERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRERERERERNRK 316
Query: 142 KDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRRIRHDSSDTSPPRRARHDSPDPS 201
++R + R R D R + T R R+ + R+A +
Sbjct: 317 RERERERERERERQRETERDREKERERKRKRQTEMDRE-RNRQTGREGRRQAERERERER 375
Query: 202 PPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSDSDLSPPRNRPRHRSSDSDLSPPRR 261
R + ++ D D R +Q+ +D D + R R + +S+ R
Sbjct: 376 ERDRQSAREREERERDRDRDRQKERERQT--EKDRDGQRETEKQREREKDRESERGRERG 433
Query: 262 RQRTKSSDSDLSPPRRSQPPG---KKAAHMYSG-----AKTGLVLTDIQREQQEL--KEQ 311
R+R K + R++ +K + +Y A++G+V +D R + + K
Sbjct: 434 REREKQKGRERDRERQTDRQAGRQRKRSTLYVNPPPRTARSGVVQSDPNRPTRGIRWKSS 493
Query: 312 DQETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQR 347
++ A F + K+ R R R E R
Sbjct: 494 PEDPKAASTRFPWGRPA---KASRGRVAGRRRWEPR 526
>gi|88501738 TRIO and F-actin binding protein isoform 6 [Homo
sapiens]
Length = 2365
Score = 53.5 bits (127), Expect = 4e-07
Identities = 57/220 (25%), Positives = 81/220 (36%), Gaps = 17/220 (7%)
Query: 112 DLPSNRHFRHDTPD-SSPRRVRHGTPDPS------PRKDRHDTPDPSPRR------ARHD 158
D P + D P SSP R P S PR R +P+ + R A+ D
Sbjct: 475 DNPRTSCAQRDNPRASSPSRATRDNPTTSCAQRDNPRASRTSSPNRATRDNPRTSCAQRD 534
Query: 159 TPDPS-PLRGARHDSDTSPPRRIRHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQKA 217
P S P R AR + TS +R +S TS P RA D+P S +R +S +
Sbjct: 535 NPRASSPNRAARDNPTTSCAQRDNPRASRTSSPNRATRDNPRTSCAQRDNPRASSPNRAT 594
Query: 218 TDSDLSSPRHKQSPGHQDSDSDLSPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRR 277
D+ +S + +P + S R+ PR + D RT DS + R
Sbjct: 595 RDNPTTSCAQRDNPRASRTSSPNRATRDNPRTSCAQRDNPRASSPNRTTQQDSPRTSCAR 654
Query: 278 SQPPGKKAAH---MYSGAKTGLVLTDIQREQQELKEQDQE 314
P + + +T L D R + QE
Sbjct: 655 RDDPRASSPNRTIQQENPRTSCALRDNPRASSPSRTIQQE 694
Score = 45.8 bits (107), Expect = 9e-05
Identities = 39/136 (28%), Positives = 56/136 (41%), Gaps = 6/136 (4%)
Query: 139 SPRKDRHDTPDPSPRRARHDTPDPS-PLRGARHDSDTSPPRRIRHDSSDTSPPRRARHDS 197
SP + D P S A+ D P S P R R + TS +R +S TS P RA D+
Sbjct: 419 SPNRATRDNPRTSC--AQRDNPRASSPSRATRDNPTTSCAQRDNPRASRTSSPNRATRDN 476
Query: 198 PDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSDSDLSPPRNRPRHRSSDSD-- 255
P S +R +S + D+ +S + +P + S R+ PR + D
Sbjct: 477 PRTSCAQRDNPRASSPSRATRDNPTTSCAQRDNPRASRTSSPNRATRDNPRTSCAQRDNP 536
Query: 256 -LSPPRRRQRTKSSDS 270
S P R R + S
Sbjct: 537 RASSPNRAARDNPTTS 552
Score = 45.1 bits (105), Expect = 1e-04
Identities = 48/177 (27%), Positives = 69/177 (38%), Gaps = 17/177 (9%)
Query: 111 EDLPSNRHFRHDTPDSSPRRVRHGTPDPSPRKDRHDTPDPS-----PRRARHDTP----- 160
ED P + +TP +S +P + D P S P+R TP
Sbjct: 327 EDTPRASSTQWNTPRASSPSRSTQLDNPRTSSTQQDNPQTSFPTCTPQRENPRTPCVQQD 386
Query: 161 DP---SPLRGA-RHDSDTSPPRRIRHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQK 216
DP SP R R +S TS +R +S TS P RA D+P S +R +S +
Sbjct: 387 DPRASSPNRTTQRENSRTSCAQRDNPKASRTSSPNRATRDNPRTSCAQRDNPRASSPSRA 446
Query: 217 ATDSDLSSPRHKQSPGHQDSDSDLSPPRNRPRHRSSDSD---LSPPRRRQRTKSSDS 270
D+ +S + +P + S R+ PR + D S P R R + S
Sbjct: 447 TRDNPTTSCAQRDNPRASRTSSPNRATRDNPRTSCAQRDNPRASSPSRATRDNPTTS 503
Score = 39.7 bits (91), Expect = 0.006
Identities = 55/198 (27%), Positives = 75/198 (37%), Gaps = 40/198 (20%)
Query: 112 DLPSNRHFRHDTPD-SSPRRVRHGTPDPS------PRKDRHDTPDPSPRR------ARHD 158
D P + D P SSP R P S PR R +P+ + R A+ D
Sbjct: 573 DNPRTSCAQRDNPRASSPNRATRDNPTTSCAQRDNPRASRTSSPNRATRDNPRTSCAQRD 632
Query: 159 TPDPS-PLRGARHDSD------------TSPPRRIRHDSSDTSPPRRARHDSPDPSPPRR 205
P S P R + DS +SP R I+ ++ TS A D+P S P R
Sbjct: 633 NPRASSPNRTTQQDSPRTSCARRDDPRASSPNRTIQQENPRTS---CALRDNPRASSPSR 689
Query: 206 --PQHNSSGDCQKATDSDLSSP-RHKQSPGHQDSDSDLSPPRNRPRHRSSDSDLSPPRRR 262
Q N C + D SSP R Q + S + PR R+R+ +R
Sbjct: 690 TIQQENPRTSCAQRDDPRASSPNRTTQQENPRTSCARRDNPRASSRNRTI--------QR 741
Query: 263 QRTKSSDSDLSPPRRSQP 280
++S + PR S P
Sbjct: 742 DNPRTSCAQRDNPRASSP 759
Score = 38.1 bits (87), Expect = 0.018
Identities = 60/226 (26%), Positives = 85/226 (37%), Gaps = 41/226 (18%)
Query: 88 PEEVKQMEA-FRSSAKWKLLGGHNEDLPSNRHFRHDTPDSS--------PRRVRHGTPDP 138
P KQ E + S A G + +R +HD P SS P R + +P
Sbjct: 924 PSRSKQSEVPWASIALRPTQGDRPQTSSPSRPAQHDPPQSSFGPTQYNLPSRATSSSHNP 983
Query: 139 SPRK-DRHDTPD-PSPRRARHDTPDPSPLRGA----RHDSD--TSPPRRIRHDSSDTSP- 189
+ R +P P+ A +P+PS A D+ +SPPR ++HD P
Sbjct: 984 GHQSTSRTSSPVYPAAYGAPLTSPEPSQPPCAVCIGHRDAPRASSPPRYLQHDPFPFFPE 1043
Query: 190 PRRARHDSPDPSPPRRPQHNSSG--DCQKATDSDLSSPRHKQ------SPGHQDSDSDLS 241
PR + P PP P G D +A+ S PRH Q P D++
Sbjct: 1044 PRAPESEPPHHEPPYIPPAVCIGHRDAPRAS----SPPRHTQFDPFPFLPDTSDAEHQCQ 1099
Query: 242 PPRNRP---------RHRSSDSDLSPPRRRQRTKSSDSDLSPPRRS 278
P++ P +R + SPPR+ DL PR S
Sbjct: 1100 SPQHEPLQLPAPVCIGYRDAPRASSPPRQAPEPSLLFQDL--PRAS 1143
Score = 35.4 bits (80), Expect = 0.12
Identities = 74/337 (21%), Positives = 119/337 (35%), Gaps = 58/337 (17%)
Query: 139 SPRKDRHDTPDPSPRRARHDTPDPS-----PLRGARHDSDTSP-PRRIRHDS--SDTSPP 190
+PR P P D P S P + H+ P P I H S +SPP
Sbjct: 1119 APRASSPPRQAPEPSLLFQDLPRASTESLVPSMDSLHECPHIPTPVCIGHRDAPSFSSPP 1178
Query: 191 RRARHDSPDPSPP-RRPQHNSSGDCQKATDSDLSSPR--HKQSPGHQDSDSDLSPPRNRP 247
R+A P+PS + P S +TDS SP + GH+D+ SPPR+ P
Sbjct: 1179 RQA----PEPSLFFQDPPGTSMESLAPSTDSLHGSPVLIPQVCIGHRDAPRASSPPRHPP 1234
Query: 248 RHRS-------------SDSDLSPPRRRQRTKSSD----SDLSPPRR--SQPPGKKAAHM 288
+ S P R + + +DL PPRR + PG +A
Sbjct: 1235 SDLAFLAPSPSPGSSGGSRGSAPPGETRHNLEREEYTVLADLPPPRRLAQRQPGPQAQCS 1294
Query: 289 YSGAKTGLVLTDIQREQQELKEQDQETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQRR 348
G +++R + + + + AF+A+ GR + + + R
Sbjct: 1295 SGGRTHSPGRAEVERLFGQERRKSEAAGAFQAQ----------DEGRSQQPSQGQSQLLR 1344
Query: 349 KAEKDSERDELYAQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDRMLREQEREG 408
+ + ++ K +R+ Q ++P + DR L +G
Sbjct: 1345 RQSSPAPSRQVTMLPAKQAELTRRSQAEPPHPWSPEKRP--------EGDRQL-----QG 1391
Query: 409 DPMANFIKKNKAKENKNKKVRPRYSGPAPPPNRFNIW 445
P+ + E + + RP SG A P +W
Sbjct: 1392 SPLPPRTSA-RTPERELRTQRPLESGQAGPRQPLGVW 1427
Score = 34.3 bits (77), Expect = 0.26
Identities = 43/161 (26%), Positives = 60/161 (37%), Gaps = 22/161 (13%)
Query: 120 RHDTPDSSPRRVRHGTPDPSPRKD--RHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPP 177
R D SSP R T +PR R D P S R +P R + S P
Sbjct: 703 RDDPRASSPNRT---TQQENPRTSCARRDNPRASSRNRTIQRDNPRTSCAQRDNPRASSP 759
Query: 178 RRI-----------RHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPR 226
R R D+ TS P RA D+P S +R +S +AT D +PR
Sbjct: 760 NRTIQQENLRTSCTRQDNPRTSSPNRATRDNPRTSCAQRDNLRASSPI-RATQQD--NPR 816
Query: 227 HKQSPGHQDSDSDLSPPRNRPRHRSSDSDLSPPRRRQRTKS 267
+ Q+ S ++ P+ + D P QR ++
Sbjct: 817 ---TCIQQNIPRSSSTQQDNPKTSCTKRDNLRPTCTQRDRT 854
Score = 29.3 bits (64), Expect = 8.4
Identities = 34/121 (28%), Positives = 49/121 (40%), Gaps = 21/121 (17%)
Query: 132 RHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRRIRHDSSD--TSP 189
RH DP P PD S + +P PL+ P I + + +SP
Sbjct: 1078 RHTQFDPFPF-----LPDTSDAEHQCQSPQHEPLQ-------LPAPVCIGYRDAPRASSP 1125
Query: 190 PRRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSP---GHQDSDSDLSPPRNR 246
PR+A P+PS + +S + + L H +P GH+D+ S SPPR
Sbjct: 1126 PRQA----PEPSLLFQDLPRASTESLVPSMDSLHECPHIPTPVCIGHRDAPSFSSPPRQA 1181
Query: 247 P 247
P
Sbjct: 1182 P 1182
>gi|52426735 ankyrin 2 isoform 1 [Homo sapiens]
Length = 3957
Score = 52.4 bits (124), Expect = 9e-07
Identities = 44/172 (25%), Positives = 65/172 (37%), Gaps = 8/172 (4%)
Query: 109 HNEDLPSNRHFRHDTPDSSPRRVRHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGA 168
H PS + RH SP+ RH T S + +RH PS + +H PS +
Sbjct: 1806 HPAASPSLKSERHAPGSPSPKTERHSTLSSSAKTERHPPVSPSSKTEKHSPVSPS-AKTE 1864
Query: 169 RHDSDTSPPRRIRHDSSDTSPPRRARHDSPDPS--PPRRPQHNSSGDCQKATDSDLSSPR 226
RH +S + +H S SP + SP S R P + SG K S
Sbjct: 1865 RHSPASSSSKTEKH--SPVSPSTKTERHSPVSSTKTERHPPVSPSGKTDKRPPVSPSGRT 1922
Query: 227 HKQ---SPGHQDSDSDLSPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPP 275
K SPG + +SP +H+ + + + S ++ PP
Sbjct: 1923 EKHPPVSPGRTEKRLPVSPSGRTDKHQPVSTAGKTEKHLPVSPSGKTEKQPP 1974
Score = 51.2 bits (121), Expect = 2e-06
Identities = 58/282 (20%), Positives = 100/282 (35%), Gaps = 27/282 (9%)
Query: 111 EDLPSNR-HFRHDTPDSSPRRVRHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGAR 169
ED+P H H S + RH PSP+ +RH T S + RH P SP
Sbjct: 1795 EDVPKKTTHRPHPAASPSLKSERHAPGSPSPKTERHSTLSSSAKTERH--PPVSPSSKTE 1852
Query: 170 HDSDTSPPRRIRHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQ 229
S SP + S +S + +H PS + +H+ S+ +
Sbjct: 1853 KHSPVSPSAKTERHSPASSSSKTEKHSPVSPS-TKTERHSPVS----------STKTERH 1901
Query: 230 SPGHQDSDSDLSPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKKAAHMY 289
P +D PP + +SP R +R S S + + K
Sbjct: 1902 PPVSPSGKTDKRPPVSPSGRTEKHPPVSPGRTEKRLPVSPSGRTDKHQPVSTAGKTEKHL 1961
Query: 290 SGAKTGLVLTDIQREQQELKEQDQETMAFE---AEFQYAETVFRDKSG--RKRNLKLERL 344
+ +G E+ +ETM+ FQ + + K+G ++ K ++
Sbjct: 1962 PVSPSGKTEKQPPVSPTSKTERIEETMSVRELMKAFQSGQDPSKHKTGLFEHKSAKQKQP 2021
Query: 345 EQRRKAEKDSERDELYAQWGKGLAQSRQQQQNVEDAMKEMQK 386
+++ K + E+ + Q R+ Q+ +K Q+
Sbjct: 2022 QEKGKVRVEKEKGPILTQ--------REAQKTENQTIKRGQR 2055
Score = 32.7 bits (73), Expect = 0.76
Identities = 35/138 (25%), Positives = 53/138 (38%), Gaps = 19/138 (13%)
Query: 225 PRHKQSPGHQDSDSDLSPPRNRPRHRSSDSDLSP----PRRRQRTKSSDSDLSPPRRSQP 280
P+ ++S D D+D S + P+H S D S R SS S+ P
Sbjct: 2615 PKQEESSSSSDPDADCSVDVDEPKHTGSGEDESGVPVLVTSESRKVSSSSESEP------ 2668
Query: 281 PGKKAAHMYSGAKTGLVLTDIQREQQEL---KEQDQETMAFEAEFQYAETVFRDKSGRKR 337
+ A + GA +GL+ + R Q D + E +FQ V + K
Sbjct: 2669 ---ELAQLKKGADSGLLPEPVIRVQPPSPLPSSMDSNSSPEEVQFQ---PVVSKQYTFKM 2722
Query: 338 NLKLERLEQRRKAEKDSE 355
N + + + EKDSE
Sbjct: 2723 NEDTQEEPGKSEEEKDSE 2740
>gi|4504487 histidine rich calcium binding protein precursor [Homo
sapiens]
Length = 699
Score = 51.6 bits (122), Expect = 2e-06
Identities = 84/422 (19%), Positives = 150/422 (35%), Gaps = 85/422 (20%)
Query: 67 EKEEEEDDGDLPVVAEFVDERPEEVKQMEAFRSSAKWKLLGGHNEDLPSNRHFRHDTPDS 126
E+EEEE++ + E E + + S + GH+ PS+RH H+ D
Sbjct: 194 EEEEEEEEEE-----EASTEYGHQAHRHRGHGSEEDEDVSDGHHHHGPSHRHQGHEEDDD 248
Query: 127 SP---------------------RRVRHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPL 165
R HG + D H DPS R H+ D
Sbjct: 249 DDDDDDDDDDDDDVSIEYRHQAHRHQGHGIEEDEDVSDGHHHRDPSHRHRSHEEDD---- 304
Query: 166 RGARHDSDTSPPRRIRHDSSDTSPPRRARHDSPDPSPPRR-PQHNSSGDCQKATDSDLSS 224
D D S H + R+ ++ P H G + D D+S+
Sbjct: 305 ---NDDDDVST--EYGHQAHRHQDHRKEEVEAVSGEHHHHVPDHRHQGHRDEEEDEDVST 359
Query: 225 PRHKQSPGH--------QDSDSDLS------PPRNRPR-HRSSDSDLS-------PPRRR 262
R Q P H ++ + +++ ++PR H+S + D P
Sbjct: 360 ERWHQGPQHVHHGLVDEEEEEEEITVQFGHYVASHQPRGHKSDEEDFQDEYKTEVPHHHH 419
Query: 263 QRT-KSSDSDLSPPRRSQPPGKKAAHMYSGAKTGLVLTDIQREQQELKEQDQETMAFEAE 321
R + D ++S Q P + +H +TG ++ +KE
Sbjct: 420 HRVPREEDEEVSAELGHQAPSHRQSH--QDEETG------HGQRGSIKEMSHHPP----- 466
Query: 322 FQYAETVFRDKSGRKRNLKLERLEQRRKAEKDSERDELYAQWGKGLAQSRQQQQNVED-- 379
TV +D+S +++ E E+ E DE Q KG + Q++ ED
Sbjct: 467 ---GHTVVKDRSHLRKDDSEEEKEKEEDPGSHEEDDESSEQGEKGTHHGSRDQEDEEDEE 523
Query: 380 ------AMKEMQKPLARYIDDEDLDRMLREQERE-GDPMA-NFIKKNKAKENKNKKVRPR 431
+E ++ + ++E+ D RE+ E G P++ + ++ + +E ++ PR
Sbjct: 524 EGHGLSLNQEEEEEEDKEEEEEEEDEERREERAEVGAPLSPDHSEEEEEEEEGLEEDEPR 583
Query: 432 YS 433
++
Sbjct: 584 FT 585
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 51.2 bits (121), Expect = 2e-06
Identities = 79/456 (17%), Positives = 156/456 (34%), Gaps = 37/456 (8%)
Query: 2 AAAPPLSKAEYLKRYLSGADAGVDRGSESGRKRRKKRPKPGGAGGKGMRIVDDDVSWTAI 61
A +PP +K+ + S A+ ++S K K P + K V ++ A
Sbjct: 558 AKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAE 617
Query: 62 STTKLEKEEEEDDGDLPVVAEFVDERPEEVKQMEAFRSSAKWKLLGGHNEDLPSNRHFRH 121
+ + + KEE + ++ + EE K E +S K + P +
Sbjct: 618 AKSPV-KEEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKS 676
Query: 122 DTPDSSPRRVRHGTPDP--SPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRR 179
SP + +P+ SP K+ +P+ + + + P + + +P +
Sbjct: 677 PEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKA 736
Query: 180 IRHDSSDTSPPRRARHD---------SPDPSPPRRPQHNSSGD-----CQKATDSDLSSP 225
+ P +A+ SP+ P + + S D + ++ SP
Sbjct: 737 KSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKEEARSPADKFPEKAKSPVKEEVKSP 796
Query: 226 RHKQSPGHQDSDSDLSPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKKA 285
+SP +D+ +P + P+ S + + Q K + P K
Sbjct: 797 EKAKSPLKEDAK---APEKEIPKKEEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKT 853
Query: 286 AHMYSGAKTGLVLTDIQREQQELKEQDQETMAFEAEFQYAETVFRDKS-----GRKRNLK 340
K + + + E K++ E++ + + DK ++ K
Sbjct: 854 EEKKDSKKEEAPKKEAPKPKVEEKKEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAK 913
Query: 341 LERLEQRRKAEK---------DSERDELYAQWGKGLAQSRQQQQNVEDAMKEMQKPLARY 391
+E E + EK D++ E K A ++ E A K +KP
Sbjct: 914 VEVKEDAKPKEKTEVAKKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEEKPKTEA 973
Query: 392 IDDEDLDRMLREQEREGDPMANFIKKNKAKENKNKK 427
ED + +E + P A +K+ + + K+ K
Sbjct: 974 KAKEDDKTLSKEPSK---PKAEKAEKSSSTDQKDSK 1006
Score = 45.1 bits (105), Expect = 1e-04
Identities = 70/393 (17%), Positives = 145/393 (36%), Gaps = 44/393 (11%)
Query: 60 AISTTKLEKEEEEDDGDLPVVAEFVDER----PEEVKQMEAFRSSAKWKLLGGHNEDLPS 115
A S K K +++ P A+ ++ P EVK E +S AK + P
Sbjct: 509 AASPEKEAKSPVKEEAKSPAEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPPEAKSPE 568
Query: 116 NRHFRHDTPDSSPRRVRHGTPD----PSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHD 171
+ SP + + + P+ K P A+ SP++
Sbjct: 569 KEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVK----- 623
Query: 172 SDTSPPRRIRHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSP 231
+ P ++ SP + P + + S + ++ SP +SP
Sbjct: 624 EEAKSPAEVKSPEKAKSPTKEEAKSPEKAKSPEKEEAKSPEKAKSPVKAEAKSPEKAKSP 683
Query: 232 GHQDSDSDLSPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSP-------PRRSQPPGKK 284
++ S ++ + + + + ++ KS + SP P +++ P K+
Sbjct: 684 VKAEAKSP-EKAKSPVKEEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKE 742
Query: 285 AAHMYSGAKTGLVLTDIQREQQELKEQDQETMAFEAEFQYAETVFRDKSGRKRNLKLERL 344
A AK + + + ++K + +T A E E + F +K+ K +K E +
Sbjct: 743 EAKSPEKAK-----SPEKAKTLDVKSPEAKTPAKE-EARSPADKFPEKA--KSPVK-EEV 793
Query: 345 EQRRKAEKDSERDELYAQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDRMLREQ 404
+ KA+ + D K + +++ V+ +KE +KP + + ++ + E+
Sbjct: 794 KSPEKAKSPLKED------AKAPEKEIPKKEEVKSPVKEEEKP--QEVKVKEPPKKAEEE 845
Query: 405 EREGDPMANFIKKNKAKENKNKKVRPRYSGPAP 437
+ P K + K++ K+ P+ P P
Sbjct: 846 KAPATP------KTEEKKDSKKEEAPKKEAPKP 872
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 49.7 bits (117), Expect = 6e-06
Identities = 68/381 (17%), Positives = 145/381 (38%), Gaps = 20/381 (5%)
Query: 67 EKEEEEDDGDLPVVAEFVDERPEEVKQMEAFR--SSAKWKLLGGHNEDLPSNRHFRHDTP 124
E +EEE+ E ER EE +Q + R + K E R +
Sbjct: 270 ELQEEEEQLRKLERQELRRERQEEEQQQQRLRREQQLRRKQEEERREQQEERREQQERRE 329
Query: 125 DSSPRRVRHGTPDPSPRKD----RHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRRI 180
RR + + R++ R + ++ R + + + R + +++
Sbjct: 330 QQEERREQQLRREQEERREQQLRREQEEERREQQLRREQEEERREQQLRREQQLRREQQL 389
Query: 181 RHDSS--DTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSDS 238
R + RR + + R Q ++ + + +H+Q Q
Sbjct: 390 RREQQLRREQQLRREQQLRREQQLRREQQLRREQQLRREQEEERHEQKHEQERREQRLKR 449
Query: 239 DLSPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKKAAHMYSGAKTGLVL 298
+ R+ + RR+Q+ K + R + ++ + L
Sbjct: 450 EQEERRDWLKREEETERHEQERRKQQLKRDQEEERRERWLKLEEEERREQQERREQQLRR 509
Query: 299 TDIQREQQELKEQDQET-----MAFEAEFQYAETVFRD---KSGRKRNLKLERLEQRRKA 350
+R +Q LK Q++E + E + + + R+ K ++ L+ ER EQR K
Sbjct: 510 EQEERREQRLKRQEEEERLQQRLRSEQQLRREQEERREQLLKREEEKRLEQERREQRLKR 569
Query: 351 EKDSERDELYAQWGKGLAQ--SRQQQQNVEDAMKEMQKPLARYIDDEDLDRMLREQEREG 408
E++ RD+L + + Q R+Q++ +E +K ++ + R +E ++ L+ +E E
Sbjct: 570 EQEERRDQLLKREEERRQQRLKREQEERLEQRLK--REEVERLEQEERREQRLKREEPEE 627
Query: 409 DPMANFIKKNKAKENKNKKVR 429
+ +K + +E + +++R
Sbjct: 628 ERRQQLLKSEEQEERRQQQLR 648
Score = 42.0 bits (97), Expect = 0.001
Identities = 36/139 (25%), Positives = 68/139 (48%), Gaps = 16/139 (11%)
Query: 302 QREQQELKEQDQETMAFEAEFQYAET---------VFRDKSGRKRNLKLERLEQRRKAEK 352
Q E+Q L+E+ ++ E E QY E + R++ ++R +LER + R + E
Sbjct: 1118 QEEEQLLREEREKRRRQELERQYREEEEVQQEEEQLLREEPEKRRRQELER-QYREEEEL 1176
Query: 353 DSERDELYAQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDRMLREQEREGDPMA 412
E ++L + + Q R++Q E+ + + QK RY D++ + + E E +
Sbjct: 1177 QQEEEQLLREEQEKRRQERERQYREEEEL-QRQKRKQRYRDEDQRSDLKWQWEPEKE--- 1232
Query: 413 NFIKKNK--AKENKNKKVR 429
N ++ NK K +N++ R
Sbjct: 1233 NAVRDNKVYCKGRENEQFR 1251
Score = 38.5 bits (88), Expect = 0.014
Identities = 71/380 (18%), Positives = 139/380 (36%), Gaps = 47/380 (12%)
Query: 65 KLEKEEEEDDGDLPVVAEFVDERPEEVKQMEAFRSSAKWKLLGGHNEDLPSNRHFRHDTP 124
+L +E+EE+ + + E R +++++ + R + + + L + R +
Sbjct: 363 QLRREQEEERREQQLRREQQLRREQQLRREQQLRREQQLR----REQQLRREQQLRREQQ 418
Query: 125 DSSPRRVRHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRRIRHDS 184
+++R + + +H+ R R L+ RR +
Sbjct: 419 LRREQQLRR-EQEEERHEQKHEQERREQRLKREQEERRDWLKREEETERHEQERRKQQLK 477
Query: 185 SDTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSDSDLSPPR 244
D RR R + R Q ++ + R +Q Q+ + L +
Sbjct: 478 RDQEEERRERWLKLEEEERREQQERREQQLRREQEE-----RREQRLKRQEEEERL---Q 529
Query: 245 NRPRHRSSDSDLSPPRRRQRTKSSDSD-LSPPRRSQPPGKKAAHMYSGAKTGLVLTDIQR 303
R R RR Q K + L RR Q + + L+ + +R
Sbjct: 530 QRLRSEQQLRREQEERREQLLKREEEKRLEQERREQ----RLKREQEERRDQLLKREEER 585
Query: 304 EQQELKEQDQETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQRRKAEKDSERDELYAQW 363
QQ LK + +E + R + ++ERLEQ + E+ +R+E +
Sbjct: 586 RQQRLKREQEERL----------------EQRLKREEVERLEQEERREQRLKREEPEEER 629
Query: 364 GKGLAQS-----RQQQQNVEDAMKEMQKPLARYIDDEDLD-RMLREQEREGDPMANFIKK 417
+ L +S R+QQQ + + ++ L R ++E L+ R+ RE E E ++
Sbjct: 630 RQQLLKSEEQEERRQQQLRREQQERREQRLKREEEEERLEQRLKREHEEER-------RE 682
Query: 418 NKAKENKNKKVRPRYSGPAP 437
+ E + ++ R R P
Sbjct: 683 QELAEEEQEQARERIKSRIP 702
Score = 38.5 bits (88), Expect = 0.014
Identities = 27/132 (20%), Positives = 63/132 (47%), Gaps = 4/132 (3%)
Query: 302 QREQQELKEQDQETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQRRKAEKDSERDELYA 361
+RE++ L+E++++ E Q E + ++ +R +LER ++ + + E L
Sbjct: 1037 EREKRRLQERERQYREEEELQQEEEQLLGEERETRRRQELERQYRKEEELQQEEEQLLRE 1096
Query: 362 QWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDD----EDLDRMLREQEREGDPMANFIKK 417
+ K Q R++Q E+ +++ ++ L R + ++L+R RE+E +++
Sbjct: 1097 EPEKRRRQERERQCREEEELQQEEEQLLREEREKRRRQELERQYREEEEVQQEEEQLLRE 1156
Query: 418 NKAKENKNKKVR 429
K + + R
Sbjct: 1157 EPEKRRRQELER 1168
Score = 37.7 bits (86), Expect = 0.024
Identities = 64/406 (15%), Positives = 152/406 (37%), Gaps = 54/406 (13%)
Query: 65 KLEKEEEEDDGDLPVVAEFVDERPEEVKQMEAFRSSAKWKLLGGHNEDLPSNRHFRHDTP 124
+L++E+EE L E + R + +K+ + R + K E++ R +
Sbjct: 566 RLKREQEERRDQLLKREE--ERRQQRLKREQEERLEQRLK-----REEVE-----RLEQE 613
Query: 125 DSSPRRVRHGTPDPSPRKDRHDTPDPSPRRA---RHDTPDPSPLRGARHDSDTSPPRRIR 181
+ +R++ P+ R+ + + RR R + + R R + + +R++
Sbjct: 614 ERREQRLKREEPEEERRQQLLKSEEQEERRQQQLRREQQERREQRLKREEEEERLEQRLK 673
Query: 182 HDSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSDSDLS 241
+ + + + + + R Q +++D + P Q+
Sbjct: 674 REHEEERREQELAEEEQEQARERIKSRIPKWQWQLESEADARQSKVYSRPRKQEGQRRRQ 733
Query: 242 PPRNRPRHRSSDSDLSPPRRRQRTKSSDSD----------------------LSPPRRSQ 279
+ R R S+ R R + + PP R Q
Sbjct: 734 EQEEKRRRRESELQWQEEERAHRQQQEEEQRRDFTWQWQAEEKSERGRQRLSARPPLREQ 793
Query: 280 PPGKKAAHMYSGAKTGLVLTDIQREQQ--ELKEQDQETMAFEAEFQY-----AETVFRDK 332
+ A + + + ++EQ+ + +E+++E E E Q A+ + ++
Sbjct: 794 RERQLRAEERQQREQRFLPEEEEKEQRRRQRREREKELQFLEEEEQLQRRERAQQLQEEE 853
Query: 333 SGRKRNLKLERLEQRRK---------AEKDSERDELYAQWGKGLAQSRQQQQNVEDAMKE 383
G + + + R +++R+ E+ R LYA+ Q R++QQ +++ +E
Sbjct: 854 DGLQEDQERRRSQEQRRDQKWRWQLEEERKRRRHTLYAKPALQ-EQLRKEQQLLQEEEEE 912
Query: 384 MQKPLARYIDDEDLDRMLREQEREGDPMANFIKKNKAKENKNKKVR 429
+Q+ ++ +R RE+E+ +++ + K + ++ R
Sbjct: 913 LQREEREKRRRQEQERQYREEEQLQQEEEQLLREEREKRRRQERER 958
Score = 37.0 bits (84), Expect = 0.040
Identities = 27/128 (21%), Positives = 63/128 (49%), Gaps = 9/128 (7%)
Query: 302 QREQQELKEQDQETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQRRKAEKDSERDELYA 361
+RE++ +EQ+++ E Q E + R++ ++R + ER ++ K + E L
Sbjct: 917 EREKRRRQEQERQYREEEQLQQEEEQLLREEREKRRRQERERQYRKDKKLQQKEEQLLGE 976
Query: 362 QWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDRMLREQEREGDPMANFIKKNKAK 421
+ K Q R+++ E+ +++ ++E L R RE+ R + + KK++ +
Sbjct: 977 EPEKRRRQEREKKYREEEELQQ---------EEEQLLREEREKRRRQEWERQYRKKDELQ 1027
Query: 422 ENKNKKVR 429
+ + + +R
Sbjct: 1028 QEEEQLLR 1035
Score = 37.0 bits (84), Expect = 0.040
Identities = 31/142 (21%), Positives = 64/142 (45%), Gaps = 21/142 (14%)
Query: 300 DIQREQQELKEQDQETMAFEAEFQYAETVFRDKSGRKR---------NLKLERLEQRRKA 350
++Q+E+++L ++QE E E QY E + RK+ +LK + ++ A
Sbjct: 1175 ELQQEEEQLLREEQEKRRQERERQYREEEELQRQKRKQRYRDEDQRSDLKWQWEPEKENA 1234
Query: 351 EKDSE------RDELYAQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDRMLREQ 404
+D++ +E + Q + RQ QQ+++ + E Q+ D + +R +Q
Sbjct: 1235 VRDNKVYCKGRENEQFRQLEDSQLRDRQSQQDLQHLLGEQQE------RDREQERRRWQQ 1288
Query: 405 EREGDPMANFIKKNKAKENKNK 426
P +++ + KE K +
Sbjct: 1289 RDRHFPEEEQLEREEQKEAKRR 1310
Score = 35.0 bits (79), Expect = 0.15
Identities = 27/106 (25%), Positives = 55/106 (51%), Gaps = 10/106 (9%)
Query: 302 QREQQELKEQDQETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQRRKAEKDSERDELYA 361
+RE+Q+ Q++E E E++ ETV R K KL+ E +R+ E E ++L
Sbjct: 230 RRERQDRVFQEEE----EKEWRKRETVLR-----KEEEKLQEEEPQRQRELQEEEEQLRK 280
Query: 362 QWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDRMLREQERE 407
+ L + RQ+++ + ++ Q+ L R ++E ++ +E++
Sbjct: 281 LERQELRRERQEEEQQQQRLRREQQ-LRRKQEEERREQQEERREQQ 325
Score = 35.0 bits (79), Expect = 0.15
Identities = 25/127 (19%), Positives = 65/127 (51%), Gaps = 14/127 (11%)
Query: 303 REQQELKEQDQETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQRRKAEKDSERDELYAQ 362
+ Q+EL+E++++ E + E +++ +++ L+ E+ +R++ E+ E+ E
Sbjct: 266 QRQRELQEEEEQLRKLERQELRRER--QEEEQQQQRLRREQQLRRKQEEERREQQE---- 319
Query: 363 WGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDRMLREQEREGDPMANFIKKNKAKE 422
+ R+QQ+ E + ++ L R ++ ++ REQE E +++ + +E
Sbjct: 320 ------ERREQQERREQQEERREQQLRREQEERREQQLRREQEEERREQQ--LRREQEEE 371
Query: 423 NKNKKVR 429
+ +++R
Sbjct: 372 RREQQLR 378
Score = 35.0 bits (79), Expect = 0.15
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 14/141 (9%)
Query: 302 QREQQELKEQ-------DQETMAFEAEFQYAETVFRDKSGR-KRNLKLERLEQR-RKAEK 352
+RE+Q+L+ Q ++E + E E Q + D+ R + L+ ER EQ+ R ++
Sbjct: 1758 EREEQQLRRQERDRKFREEEQLRQEREEQQLRSQESDRKFREEEQLRQEREEQQLRPQQR 1817
Query: 353 DS----ERDEL-YAQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDRMLREQERE 407
D E ++L + + L Q R +Q E+ +K + + R QERE
Sbjct: 1818 DGKYRWEEEQLQLEEQEQRLRQERDRQYRAEEQFATQEKSRREEQELWQEEEQKRRQERE 1877
Query: 408 GDPMANFIKKNKAKENKNKKV 428
I++ + +E ++++V
Sbjct: 1878 RKLREEHIRRQQKEEQRHRQV 1898
Score = 35.0 bits (79), Expect = 0.15
Identities = 33/178 (18%), Positives = 72/178 (40%), Gaps = 17/178 (9%)
Query: 219 DSDLSSPRHKQSPGHQDSDSDLSPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRS 278
+ L R +Q Q+SD + R + L P +R + + + L +
Sbjct: 1776 EEQLRQEREEQQLRSQESDRKFRE-EEQLRQEREEQQLRPQQRDGKYRWEEEQLQLEEQE 1834
Query: 279 QPPGKKAAHMYSGAKTGLVLTDIQREQQELKEQDQETMAFEAEFQYAETVFRDKSGRKRN 338
Q ++ Y + +RE+QEL +++++ + + R+R
Sbjct: 1835 QRLRQERDRQYRAEEQFATQEKSRREEQELWQEEEQ---------------KRRQERERK 1879
Query: 339 LKLERLEQRRKAE-KDSERDELYAQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDE 395
L+ E + +++K E + + E+ +Q GKG + + + ++ PL YI ++
Sbjct: 1880 LREEHIRRQQKEEQRHRQVGEIKSQEGKGHGRLLEPGTHQFASVPVRSSPLYEYIQEQ 1937
Score = 34.7 bits (78), Expect = 0.20
Identities = 28/142 (19%), Positives = 67/142 (47%), Gaps = 14/142 (9%)
Query: 300 DIQREQQELKEQDQETMAF-EAEFQYA---------ETVFRDKSGRKRNLKLERLEQRRK 349
++Q+E+++L +++ET E E QY E + R++ ++R + ER + +
Sbjct: 1055 ELQQEEEQLLGEERETRRRQELERQYRKEEELQQEEEQLLREEPEKRRRQERERQCREEE 1114
Query: 350 AEKDSERDELYAQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDD----EDLDRMLREQE 405
+ E L + K Q ++Q E+ +++ ++ L R + ++L+R RE+E
Sbjct: 1115 ELQQEEEQLLREEREKRRRQELERQYREEEEVQQEEEQLLREEPEKRRRQELERQYREEE 1174
Query: 406 REGDPMANFIKKNKAKENKNKK 427
+++ + K + ++
Sbjct: 1175 ELQQEEEQLLREEQEKRRQERE 1196
Score = 33.9 bits (76), Expect = 0.34
Identities = 39/214 (18%), Positives = 90/214 (42%), Gaps = 28/214 (13%)
Query: 234 QDSDSDLSPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKKAAHMYSGAK 293
QD + R PR R + + RRRQ+ + + +L+ ++ +
Sbjct: 111 QDRRQEEDQRRFEPRDRQLEEEPGQ-RRRQKRQEQERELAEGEEQSEKQERLEQRDRQRR 169
Query: 294 TGLVLTDIQREQQELKEQDQ--------------ETMAFEAEFQYAETVFRDKSGRKRNL 339
++ R++QE +E+++ ET F E Q R+ +R
Sbjct: 170 D----EELWRQRQEWQEREERRAEEEQLQSCKGHETEEFPDEEQLRR---RELLELRRKG 222
Query: 340 KLERLEQRRKAEKDSERDELYAQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDR 399
+ E+ +QRR+ + ++E +W K R++++ +++ + Q+ L ++E L +
Sbjct: 223 REEKQQQRRERQDRVFQEEEEKEWRKRETVLRKEEEKLQEEEPQRQRELQE--EEEQLRK 280
Query: 400 M----LREQEREGDPMANFIKKNKAKENKNKKVR 429
+ LR + +E + +++ + K ++ R
Sbjct: 281 LERQELRRERQEEEQQQQRLRREQQLRRKQEEER 314
Score = 32.3 bits (72), Expect = 0.99
Identities = 52/259 (20%), Positives = 97/259 (37%), Gaps = 36/259 (13%)
Query: 149 DPSPRRARHDTPDPSPLRGARHDSDTSPPRRIRHDSSDTSPPRRARHDSPDPSPPRRPQH 208
+ S R R D L G + + D RR R D P + + + +R
Sbjct: 1254 EDSQLRDRQSQQDLQHLLGEQQERDREQERR-RWQQRDRHFPEEEQLEREEQKEAKRRDR 1312
Query: 209 NSSGDCQKATDSDLSSPRHKQSPGHQDSDSDLSPPRNRPRHRSSDSDLSPPRRRQRTKSS 268
S + Q + R +++ + L R P RR++R +
Sbjct: 1313 KSQEEKQLLREEREEKRRRQETDRKFREEEQLLQEREE----------QPLRRQERDRKF 1362
Query: 269 DSDLSPPRRSQPPGKKAAHMYSGAKTGLVLTDIQREQQELKEQDQETMAFEAEFQYAETV 328
+ R Q G+K + +RE++ LKE+ Q+ E E Q +
Sbjct: 1363 REE---ELRHQEQGRKFLEEEQRLRRQ------ERERKFLKEE-QQLRCQEREQQLRQD- 1411
Query: 329 FRDKSGRKRNLKLERLEQRRKAEKDSERDELYAQWGKGLAQSRQQQQNVEDAMKEMQKPL 388
RD+ R+ +L R E+ RK ++ + Q R+Q++ + +E Q
Sbjct: 1412 -RDRKFREEEQQLSRQERDRKFREEEQ-------------QVRRQERERKFLEEEQQLRQ 1457
Query: 389 ARYIDDEDLDRMLREQERE 407
R+ + +++L+E+E +
Sbjct: 1458 ERHRKFREEEQLLQEREEQ 1476
Score = 32.0 bits (71), Expect = 1.3
Identities = 64/373 (17%), Positives = 133/373 (35%), Gaps = 40/373 (10%)
Query: 65 KLEKEEEEDDGDLPVVAEFVDERPEEVKQMEAFRSSAKWKLLGGHNEDLPSNRHFRHDTP 124
+L K EE+++ + ER E+ + E + +L H E+ + +
Sbjct: 632 QLLKSEEQEERRQQQLRREQQERREQRLKREEEEERLEQRLKREHEEER-REQELAEEEQ 690
Query: 125 DSSPRRVRHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRRIRHDS 184
+ + R++ P K + + R P G R + RR R
Sbjct: 691 EQARERIKSRIP-----KWQWQLESEADARQSKVYSRPRKQEGQRRRQEQEEKRRRRESE 745
Query: 185 SDTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPR-HKQSPGHQDSDSDLSPP 243
RA + R + + Q S+ R + P + + L
Sbjct: 746 LQWQEEERAHRQQQEEEQRR----DFTWQWQAEEKSERGRQRLSARPPLREQRERQLRAE 801
Query: 244 RNRPRHRS--SDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKKAAHMYSGAKTGLVLTDI 301
+ R + + + RRRQR + Q ++ A + GL
Sbjct: 802 ERQQREQRFLPEEEEKEQRRRQRREREKELQFLEEEEQLQRRERAQQLQEEEDGLQEDQE 861
Query: 302 QREQQELKEQDQETMAFEAEFQ------YAETVFRDKSGRKRNLKLERLEQRRKAEKDSE 355
+R QE + + E E + YA+ +++ +++ L E E+ ++ E++
Sbjct: 862 RRRSQEQRRDQKWRWQLEEERKRRRHTLYAKPALQEQLRKEQQLLQEEEEELQREEREKR 921
Query: 356 RDELYAQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDRMLREQEREGDPMANFI 415
R Q +++Q E+ +++ ++ L R +E R +E+ER+
Sbjct: 922 R-----------RQEQERQYREEEQLQQEEEQLLR---EEREKRRRQERERQ-------Y 960
Query: 416 KKNKAKENKNKKV 428
+K+K + K +++
Sbjct: 961 RKDKKLQQKEEQL 973
Score = 30.8 bits (68), Expect = 2.9
Identities = 25/107 (23%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Query: 301 IQREQQELKEQDQETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQRRKAEKDSERDELY 360
++R++QE K + E E Q RD+ R+ L+ E+++ + ERD +
Sbjct: 1588 VRRQEQERKFMEDEQQLRRQEGQQQLRQERDRKFREDEQLLQEREEQQLHRQ--ERDRKF 1645
Query: 361 AQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDRMLREQERE 407
+ L + ++QQ D ++ ++ + E ++ LR QER+
Sbjct: 1646 LEEEPQLRRQEREQQLRHDRDRKFRE--EEQLLQEGEEQQLRRQERD 1690
Score = 30.4 bits (67), Expect = 3.8
Identities = 51/247 (20%), Positives = 92/247 (37%), Gaps = 35/247 (14%)
Query: 178 RRIRHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSD 237
R+ R + R R + R+ +H + + L R +Q Q+ D
Sbjct: 1430 RKFREEEQQVRRQERERKFLEEEQQLRQERHRKFRE-----EEQLLQEREEQQLHRQERD 1484
Query: 238 SDLSPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKKAAHMYSGAKTGLV 297
+ R + D R Q +S + P R ++ H + L
Sbjct: 1485 RKFLEEEQQLRRQERDRKF----REQELRSQE-----PERKFLEEEQQLHRQQRQRKFLQ 1535
Query: 298 LTDIQREQQ--ELKEQDQETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQRRKAEKDSE 355
R Q+ + + QD++ E E E + S ++R+ K RLE+++ ++ E
Sbjct: 1536 EEQQLRRQERGQQRRQDRDRKFREEEQLRQEREEQQLSRQERDRKF-RLEEQKVRRQEQE 1594
Query: 356 R----DELYAQWGKGLAQSRQQQ-----------QNVEDAMKEMQKPLARYIDDEDLDRM 400
R DE + +G Q RQ++ Q E+ Q+ +++++E
Sbjct: 1595 RKFMEDEQQLRRQEGQQQLRQERDRKFREDEQLLQEREEQQLHRQERDRKFLEEEP---Q 1651
Query: 401 LREQERE 407
LR QERE
Sbjct: 1652 LRRQERE 1658
Score = 30.0 bits (66), Expect = 4.9
Identities = 25/133 (18%), Positives = 63/133 (47%), Gaps = 13/133 (9%)
Query: 302 QREQQELKEQDQETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQRRKAEKDSERDELY- 360
Q +++ +E+++ Q E + R++ ++R + ER + R+K E E ++L
Sbjct: 984 QEREKKYREEEELQ-------QEEEQLLREEREKRRRQEWER-QYRKKDELQQEEEQLLR 1035
Query: 361 AQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDD----EDLDRMLREQEREGDPMANFIK 416
+ K Q R++Q E+ +++ ++ L + ++L+R R++E ++
Sbjct: 1036 EEREKRRLQERERQYREEEELQQEEEQLLGEERETRRRQELERQYRKEEELQQEEEQLLR 1095
Query: 417 KNKAKENKNKKVR 429
+ K + ++ R
Sbjct: 1096 EEPEKRRRQERER 1108
Score = 29.6 bits (65), Expect = 6.4
Identities = 26/129 (20%), Positives = 61/129 (47%), Gaps = 8/129 (6%)
Query: 301 IQREQQELKEQDQETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQRRKAEKDSE---RD 357
++R+++ K ++E + E E Q RD+ R+ + E+++ ++S+ R+
Sbjct: 1740 LRRQERYRKILEEEQLRPEREEQQLRRQERDRKFREEEQLRQEREEQQLRSQESDRKFRE 1799
Query: 358 ELYAQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDRMLREQEREGDPMANFIKK 417
E + + Q R QQ++ + +E Q L +E R+ +E++R+ F +
Sbjct: 1800 EEQLRQEREEQQLRPQQRDGKYRWEEEQLQL-----EEQEQRLRQERDRQYRAEEQFATQ 1854
Query: 418 NKAKENKNK 426
K++ + +
Sbjct: 1855 EKSRREEQE 1863
>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
[Homo sapiens]
Length = 624
Score = 49.7 bits (117), Expect = 6e-06
Identities = 60/278 (21%), Positives = 112/278 (40%), Gaps = 32/278 (11%)
Query: 160 PDPSPLRGARHDSDTSPPRRIRHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATD 219
P+ +P A+ + +R+R S S A S R+ + S K+
Sbjct: 264 PEMTPQAAAKELEEVM--KRVREAQSFISA---AIEPESGKSNERKGGRSRSHTRSKSRS 318
Query: 220 SDLSSPRHKQSPGHQDSDSDLSPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQ 279
S S R K+S S S NR R R D S ++R+KS + S R
Sbjct: 319 SSKSHSRRKRSQSKHRSRS-----HNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHS 373
Query: 280 PPGKKAAHMYSGAKTGLVLTDIQREQQELKEQDQETMAFEAEFQYAETVFRDKSGRKRNL 339
+K K + D ++E++ KE+++E + + RDK K
Sbjct: 374 RDKRKDTREKIKEKERVKEKDREKEREREKEREKEK-------ERGKNKDRDKEREKDRE 426
Query: 340 KLERLEQRRKAEKDSERDELYAQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDR 399
K + ++ R+ EK+ E+D ++++ +D KE +K ++ ID++ R
Sbjct: 427 KDKEKDREREREKEHEKDR------------DKEKEKEQDKEKEREKDRSKEIDEK---R 471
Query: 400 MLREQEREGDPMANFIKKNKAKENKNKKVRPRYSGPAP 437
++ R N +++++ + ++ R R S +P
Sbjct: 472 KKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSP 509
Score = 43.1 bits (100), Expect = 6e-04
Identities = 56/285 (19%), Positives = 95/285 (33%), Gaps = 48/285 (16%)
Query: 116 NRHFRHDTPDSSPRRVRHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTS 175
+R R S R R T + K+R D R R + RG D D
Sbjct: 361 SRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKE 420
Query: 176 PPRRIRHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQD 235
+ D R + D + + + + +K ++ R K
Sbjct: 421 REKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSR-- 478
Query: 236 SDSDLSPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKKAAHMYSGAKTG 295
+PPR+ R S S S RRR+R++SS PR S+ +K++ S
Sbjct: 479 -----TPPRSYNASRRSRSS-SRERRRRRSRSSSRS---PRTSKTIKRKSSRSPSPRS-- 527
Query: 296 LVLTDIQREQQELKEQDQETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQRRKAEKD-S 354
R+K +KR + + + +RR+ E+ S
Sbjct: 528 ----------------------------------RNKKDKKREKERDHISERRERERSTS 553
Query: 355 ERDELYAQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDR 399
R + GK + ++ KE +++ +DD+D R
Sbjct: 554 MRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDSSVSKEVDDKDAPR 598
>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
[Homo sapiens]
Length = 508
Score = 49.7 bits (117), Expect = 6e-06
Identities = 60/278 (21%), Positives = 112/278 (40%), Gaps = 32/278 (11%)
Query: 160 PDPSPLRGARHDSDTSPPRRIRHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATD 219
P+ +P A+ + +R+R S S A S R+ + S K+
Sbjct: 148 PEMTPQAAAKELEEVM--KRVREAQSFISA---AIEPESGKSNERKGGRSRSHTRSKSRS 202
Query: 220 SDLSSPRHKQSPGHQDSDSDLSPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQ 279
S S R K+S S S NR R R D S ++R+KS + S R
Sbjct: 203 SSKSHSRRKRSQSKHRSRS-----HNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHS 257
Query: 280 PPGKKAAHMYSGAKTGLVLTDIQREQQELKEQDQETMAFEAEFQYAETVFRDKSGRKRNL 339
+K K + D ++E++ KE+++E + + RDK K
Sbjct: 258 RDKRKDTREKIKEKERVKEKDREKEREREKEREKEK-------ERGKNKDRDKEREKDRE 310
Query: 340 KLERLEQRRKAEKDSERDELYAQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDR 399
K + ++ R+ EK+ E+D ++++ +D KE +K ++ ID++ R
Sbjct: 311 KDKEKDREREREKEHEKDR------------DKEKEKEQDKEKEREKDRSKEIDEK---R 355
Query: 400 MLREQEREGDPMANFIKKNKAKENKNKKVRPRYSGPAP 437
++ R N +++++ + ++ R R S +P
Sbjct: 356 KKDKKSRTPPRSYNASRRSRSSSRERRRRRSRSSSRSP 393
Score = 43.1 bits (100), Expect = 6e-04
Identities = 56/285 (19%), Positives = 95/285 (33%), Gaps = 48/285 (16%)
Query: 116 NRHFRHDTPDSSPRRVRHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTS 175
+R R S R R T + K+R D R R + RG D D
Sbjct: 245 SRERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKE 304
Query: 176 PPRRIRHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQD 235
+ D R + D + + + + +K ++ R K
Sbjct: 305 REKDREKDKEKDREREREKEHEKDRDKEKEKEQDKEKEREKDRSKEIDEKRKKDKKSR-- 362
Query: 236 SDSDLSPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKKAAHMYSGAKTG 295
+PPR+ R S S S RRR+R++SS PR S+ +K++ S
Sbjct: 363 -----TPPRSYNASRRSRSS-SRERRRRRSRSSSRS---PRTSKTIKRKSSRSPSPRS-- 411
Query: 296 LVLTDIQREQQELKEQDQETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQRRKAEKD-S 354
R+K +KR + + + +RR+ E+ S
Sbjct: 412 ----------------------------------RNKKDKKREKERDHISERRERERSTS 437
Query: 355 ERDELYAQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDR 399
R + GK + ++ KE +++ +DD+D R
Sbjct: 438 MRKSSNDRDGKEKLEKNSTSLKEKEHNKEPDSSVSKEVDDKDAPR 482
>gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo
sapiens]
Length = 820
Score = 49.3 bits (116), Expect = 8e-06
Identities = 54/275 (19%), Positives = 93/275 (33%), Gaps = 35/275 (12%)
Query: 122 DTPDSSPRRVRHGTPDPSPRKDRHDTPDPSPRRARHDTPD----PSPLRGARHDSDTSPP 177
D S R R TPD +DR PS R RH + D S R
Sbjct: 12 DASPSKEERKRSRTPDRERDRDRDRKSSPSKDRKRHRSRDRRRGGSRSRSRSRSKSAERE 71
Query: 178 RRIRHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSD 237
RR + D R + D RR + D S + + S ++ +
Sbjct: 72 RRHKERERDKERDRNKKDRDRDKDGHRRDKDRKRSSLSPGRGKDFKSRKDRDSKKDEEDE 131
Query: 238 SDLSPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKKAAHMYSGAKTGLV 297
P+ +P S + L+ + + ++ LS R K+
Sbjct: 132 HGDKKPKAQP--LSLEELLAKKKAEEEAEAKPKFLSKAEREAEALKRRQQ---------- 179
Query: 298 LTDIQREQQELKEQDQETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQRRKAEKDSERD 357
+++ Q+ L+E+ ++ F+ + D R+R + ER+E+ +D E
Sbjct: 180 --EVEERQRMLEEERKKRKQFQ---DLGRKMLEDPQERERRERRERMERETNGNEDEE-- 232
Query: 358 ELYAQWGKGLAQSRQQQQNVEDAMKEMQKPLARYI 392
RQ+ + +D KE+ RY+
Sbjct: 233 ------------GRQKIREEKDKSKELHAIKERYL 255
Score = 48.5 bits (114), Expect = 1e-05
Identities = 47/213 (22%), Positives = 92/213 (43%), Gaps = 15/213 (7%)
Query: 199 DPSPPRRPQHNS-SGDCQKATDSDLSSPRHKQSPGHQDSDSDLSPPRNRPRHRSSDSDLS 257
D SP + + S + D ++ D D S K H+ D R+R R RS ++
Sbjct: 12 DASPSKEERKRSRTPDRERDRDRDRKSSPSKDRKRHRSRDRRRGGSRSRSRSRSKSAERE 71
Query: 258 PPRRRQRTKSSDSDLSPPRRSQPPGKKAAHMYSGAKTGLVLTDIQREQQELKEQDQETMA 317
RR + + D + ++ + K K + ++ + K++D +
Sbjct: 72 ---RRHKERERDKERDRNKKDRDRDKDGHRRDKDRKRSSLSPGRGKDFKSRKDRDSK--- 125
Query: 318 FEAEFQYAETVFRDKSGRKRNLKLERLEQRRKAEKDSERDELYAQWGKGLAQS-RQQQQN 376
+ E DK + + L LE L ++KAE+++E + + A++ +++QQ
Sbjct: 126 -----KDEEDEHGDKKPKAQPLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALKRRQQE 180
Query: 377 VEDAMKEMQKPLARYIDDEDLDRMLRE--QERE 407
VE+ + +++ + +DL R + E QERE
Sbjct: 181 VEERQRMLEEERKKRKQFQDLGRKMLEDPQERE 213
>gi|169177031 PREDICTED: similar to hCG30082, partial [Homo sapiens]
Length = 299
Score = 48.9 bits (115), Expect = 1e-05
Identities = 48/169 (28%), Positives = 59/169 (34%), Gaps = 26/169 (15%)
Query: 128 PRRVRHGTPDPSPRKD----------RHDTPDP----SPRRARHDTPDPSPLRGAR-HDS 172
P RV+ P PR+D +TP P +PR DTP P R D
Sbjct: 38 PERVKQCC-QPCPRRDLLASWPCRLFSSETPRPRDCETPRPRDCDTPRPRDCETPRPRDC 96
Query: 173 DTSPPRRIRHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPG 232
DT PR D PR D+P P P+ DC D +PR +
Sbjct: 97 DTPRPR-------DCETPRPRDCDTPRPRDCETPRPR---DCDTPRPRDCETPRPRDCET 146
Query: 233 HQDSDSDLSPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPP 281
+ D D PR+ R D D PR + D D PR P
Sbjct: 147 PRPRDCDTPRPRDCDTPRPRDCDTPRPRDCDTPRPRDCDTPRPRDCDTP 195
Score = 40.4 bits (93), Expect = 0.004
Identities = 45/148 (30%), Positives = 56/148 (37%), Gaps = 18/148 (12%)
Query: 117 RHFRHDTPD----SSPRRVRHGTPDP----SPRKDRHDTPDP----SPRRARHDTPDPSP 164
R F +TP +PR TP P +PR DTP P +PR DTP P
Sbjct: 60 RLFSSETPRPRDCETPRPRDCDTPRPRDCETPRPRDCDTPRPRDCETPRPRDCDTPRPRD 119
Query: 165 LRGAR-HDSDTSPPRRIRHDSS-DTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATDSDL 222
R D DT PR D PR D+P P P+ DC D
Sbjct: 120 CETPRPRDCDTPRPRDCETPRPRDCETPRPRDCDTPRPRDCDTPRPR---DCDTPRPRDC 176
Query: 223 SSPRHKQSPGHQDSDSDLSPPRNRPRHR 250
+PR + + D D PR+ +HR
Sbjct: 177 DTPRPRDCDTPRPRDCDTPRPRDL-KHR 203
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 48.9 bits (115), Expect = 1e-05
Identities = 57/192 (29%), Positives = 79/192 (41%), Gaps = 12/192 (6%)
Query: 115 SNRHFRHDTPDSSPRRVRHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDT 174
+ R R TP ++ RR R TP + R+ R TP + RR+R T SP+ R S T
Sbjct: 1931 TRRRSRSRTP-TTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRT---SPITRRRSRSRT 1986
Query: 175 SPPRRIRHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQ 234
SP R R S + RR P RR + + ++ + S K+S
Sbjct: 1987 SPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAIRRRSRSRTPLLPRKRSRSRS 2046
Query: 235 DSDSDLSPPRNRPRHRSSDSDL--SPPRRRQRTKS-SDSDLSPPRRSQPPGKKAAHMYSG 291
PR L SPP R+R+ S S SD S R + PP A +SG
Sbjct: 2047 PLAIRRRSRSRTPRTARGKRSLTRSPPAIRRRSASGSSSDRS--RSATPP---ATRNHSG 2101
Query: 292 AKTGLVLTDIQR 303
++T V + R
Sbjct: 2102 SRTPPVALNSSR 2113
Score = 48.1 bits (113), Expect = 2e-05
Identities = 47/162 (29%), Positives = 68/162 (41%), Gaps = 25/162 (15%)
Query: 124 PDSSPRRVRHGTPDPSPRKDRHDTPDPSPRRARHDTPD-PSPLRGARHDSDTSPPRRIRH 182
P + PRR R G S K R +P+ S + +P+ P R AR S +SP + +
Sbjct: 1629 PRALPRRSRSG----SSSKGRGPSPEGSS--STESSPEHPPKSRTARRGSRSSPEPKTK- 1681
Query: 183 DSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSDSDLSP 242
S T P RR+ SP+ + R S + PRH++SP +S
Sbjct: 1682 --SRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSP-------SVSS 1732
Query: 243 PRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKK 284
P + RSS RR+R+ SS + RR + P K
Sbjct: 1733 PEPAEKSRSS--------RRRRSASSPRTKTTSRRGRSPSPK 1766
Score = 47.4 bits (111), Expect = 3e-05
Identities = 85/387 (21%), Positives = 131/387 (33%), Gaps = 50/387 (12%)
Query: 28 SESGRKRRKKR-PKPGGAGGKGMRIVDDDVSWTAISTTKLEKEEEEDDGDLPVVAEFVDE 86
SES K+RK R P P K R D + STT K A D
Sbjct: 220 SESESKKRKHRSPTP-----KSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSASSSDT 274
Query: 87 RPEEVKQMEAFRSSAKWKLLGGHNEDLPSNRHFRHDTPDSSPRRV---RHGTPDPSPR-- 141
+ A + L G + S R D P S P R +P+ + +
Sbjct: 275 SRSRSRSAAAKTHTTA---LAGRSPSPASGRRGEGDAPFSEPGTTSTQRPSSPETATKQP 331
Query: 142 --------KDRHDT----PDPSPRRARH--DTPDPSPLRGARHDSDTSP----------- 176
KD+ + P PSP R+ + P P+PL RH P
Sbjct: 332 SSPYEDKDKDKKEKSATRPSPSPERSSTGPEPPAPTPLLAERHGGSPQPLATTPLSQEPV 391
Query: 177 -PRRIRHDSSDTSPPR---RARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPG 232
P + D SPP+ + S S P PQ + S SP+ +PG
Sbjct: 392 NPPSEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTK---VSRHASSSPESPKPAPAPG 448
Query: 233 HQDSDSDLSPPRNRPR---HRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKKAAHMY 289
S +NR R +P RR R++S + RS+ P K+ H
Sbjct: 449 SHREISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKR-GHSR 507
Query: 290 SGAKTGLVLTDIQREQQELKEQDQETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQRRK 349
S + QR + Q + ++ + + GR R+ + R R
Sbjct: 508 SRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSP 567
Query: 350 AEKDSERDELYAQWGKGLAQSRQQQQN 376
A + R A+ G+ +++ ++++
Sbjct: 568 ATRGRSRSRTPARRGRSRSRTPARRRS 594
Score = 43.5 bits (101), Expect = 4e-04
Identities = 68/297 (22%), Positives = 104/297 (35%), Gaps = 25/297 (8%)
Query: 1 MAAAPPLSKAEYLKRYLSGADAGVDRGSESGRKRRKKRPKPGGAGGKGMRIVDDDVSWTA 60
+++ P K+ +R S A R + R+ R PKP G R
Sbjct: 1730 VSSPEPAEKSRSSRRRRS---ASSPRTKTTSRRGRSPSPKPRGLQRSRSR---------- 1776
Query: 61 ISTTKLEKEEEEDDGDLPVVAEFVDERPEEVKQMEAFRSSAKWKLLGGHNEDLPSNRHFR 120
++ EK D ++ R +Q RS + GG S
Sbjct: 1777 ---SRREKTRTTRRRDRSGSSQSTSRR----RQRSRSRSRVTRRRRGGSGYHSRSPARQE 1829
Query: 121 HDTPDSSPRRVRHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRRI 180
S RR R TP P+ RK P+P + P+ R +R + RR
Sbjct: 1830 SSRTSSRRRRGRSRTP-PTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRS 1888
Query: 181 RHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSDSDL 240
R S TSP R R S RR + +S ++ + S ++S +
Sbjct: 1889 R---SRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRR 1945
Query: 241 SPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKKAAHMYSGAKTGLV 297
S R P R +PP R+R++S S ++ RRS+ S ++T V
Sbjct: 1946 SRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPIT-RRRSRSRTSPVTRRRSRSRTSPV 2001
Score = 42.7 bits (99), Expect = 7e-04
Identities = 42/139 (30%), Positives = 53/139 (38%), Gaps = 29/139 (20%)
Query: 175 SPPRRIRHDSSDT-----SPPRRARHDSPDP-----SPPRRPQHNSSGDCQKATDSDLSS 224
+PPRR R SS +PPRR+R S P P R H+SS K +
Sbjct: 792 TPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSG--TP 849
Query: 225 PRHKQSPGHQDSDSDLSPPR-------------NRPRHRSSDSDLSPPRRRQRTKSSDSD 271
PR Q ++ ++P R +R R S S SPPR KSS
Sbjct: 850 PRQGSITSPQANEQSVTPQRRSCFESSPDPELKSRTPSRHSCSGSSPPR----VKSSTPP 905
Query: 272 LSPPRRSQPPGKKAAHMYS 290
P RS P K + S
Sbjct: 906 RQSPSRSSSPQPKVKAIIS 924
Score = 42.0 bits (97), Expect = 0.001
Identities = 39/167 (23%), Positives = 59/167 (35%), Gaps = 3/167 (1%)
Query: 124 PDSSPRRVRHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRRIRHD 183
P + R R P P+ RK R + S + + S + S +S
Sbjct: 2586 PKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2645
Query: 184 SSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSDSDLSPP 243
SS SP + P P+ P++P ++ + S R +S + + P
Sbjct: 2646 SSSPSPAKPGPQALPKPASPKKPPPGERR--SRSPRKPIDSLRDSRSLSYSPVERRRPSP 2703
Query: 244 RNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKKAAHMYS 290
+ PR + S S RR QR S S RR P + H S
Sbjct: 2704 QPSPRDQQSSSSERGSRRGQR-GDSRSPSHKRRRETPSPRPMRHRSS 2749
Score = 41.6 bits (96), Expect = 0.002
Identities = 51/219 (23%), Positives = 87/219 (39%), Gaps = 18/219 (8%)
Query: 112 DLPSNRHFRHDTPDSSPRRVRHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHD 171
+L S RH SSP RV+ TP PR+ + P P+ +P R H
Sbjct: 880 ELKSRTPSRHSCSGSSPPRVKSSTP---PRQSPSRSSSPQPKVKAIISP-----RQRSHS 931
Query: 172 SDTSP-PRRIRHDSSDTSPPRRARHDSPDPSPPRR--PQHNSSGDCQKATDSDLSSPRHK 228
+SP P R+ + + PRR+R SP + R P+++ SG T +P +
Sbjct: 932 GSSSPSPSRV----TSRTTPRRSRSVSPCSNVESRLLPRYSHSGSSSPDTKVKPETPPRQ 987
Query: 229 QSPGHQDSDSDLSPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKKAAHM 288
H S S + + S S P ++++K S P S G K++
Sbjct: 988 ---SHSGSISPYPKVKAQTPPGPSLSGSKSPCPQEKSKDSLVQSCPGSLSLCAGVKSSTP 1044
Query: 289 YSGAKTGLVLTDIQREQQELKEQDQETMAFEAEFQYAET 327
+ G+ ++ + Q + +T + E ++E+
Sbjct: 1045 PGESYFGVSSLQLKGQSQTSPDHRSDTSSPEVRQSHSES 1083
Score = 40.8 bits (94), Expect = 0.003
Identities = 43/188 (22%), Positives = 61/188 (32%), Gaps = 30/188 (15%)
Query: 128 PRRVRHGTPDP------SPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRR-- 179
PRR R + P +P + H + P P+ P + + + + P+R
Sbjct: 812 PRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQGSITSPQANEQSVTPQRRS 871
Query: 180 ---------------IRHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSS 224
RH S +SPPR +PPR+ SS K + S
Sbjct: 872 CFESSPDPELKSRTPSRHSCSGSSPPR-----VKSSTPPRQSPSRSSSPQPKV--KAIIS 924
Query: 225 PRHKQSPGHQDSDSDLSPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKK 284
PR + G R PR S S S R + S S S P P
Sbjct: 925 PRQRSHSGSSSPSPSRVTSRTTPRRSRSVSPCSNVESRLLPRYSHSGSSSPDTKVKPETP 984
Query: 285 AAHMYSGA 292
+SG+
Sbjct: 985 PRQSHSGS 992
Score = 40.4 bits (93), Expect = 0.004
Identities = 48/185 (25%), Positives = 64/185 (34%), Gaps = 10/185 (5%)
Query: 111 EDLPSNRHFRHDTPDSSPRRVRHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPLR-GAR 169
+D+P DSSP P P+ R + PS + P R G+
Sbjct: 1467 KDIPRTPSRGRSECDSSPE------PKALPQTPRPRSRSPSSPELNNKCLTPQRERSGSE 1520
Query: 170 HDSDTSPPRRIRHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQ 229
D R S + P SP R + +SS D + T + L
Sbjct: 1521 SSVDQKTVARTPLGQRSRSGSSQELDVKPSASPQERSESDSSPDSKAKTRTPLRQRSRSG 1580
Query: 230 SPGHQDSDSDLSPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQPPGKKAAHMY 289
S DS S LSP R R SS PR R +S SD SP ++ P
Sbjct: 1581 SSPEVDSKSRLSP--RRSRSGSSPEVKDKPRAAPRAQSG-SDSSPEPKAPAPRALPRRSR 1637
Query: 290 SGAKT 294
SG+ +
Sbjct: 1638 SGSSS 1642
Score = 38.5 bits (88), Expect = 0.014
Identities = 43/196 (21%), Positives = 72/196 (36%), Gaps = 21/196 (10%)
Query: 140 PRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTS----------PPRRIRHDSSDTSP 189
P K+R + S + + S + S +S P ++ S T
Sbjct: 2526 PAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPA 2585
Query: 190 PRRARHDS--PDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSDSDLSPPRNRP 247
P+ A + P+P+P +R + +SS ++ S SS S S S S +
Sbjct: 2586 PKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-- 2643
Query: 248 RHRSSDSDLSP--PRRRQRTKSSDSDLSPP--RRSQPPGKKAAHMYSGAKTGLVLTDIQR 303
SS S SP P + K + PP RRS+ P K + + +R
Sbjct: 2644 ---SSSSSPSPAKPGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSYSPVERRR 2700
Query: 304 EQQELKEQDQETMAFE 319
+ +DQ++ + E
Sbjct: 2701 PSPQPSPRDQQSSSSE 2716
Score = 37.7 bits (86), Expect = 0.024
Identities = 31/131 (23%), Positives = 50/131 (38%), Gaps = 3/131 (2%)
Query: 137 DPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRRIRHDSSDTSPPRRARHD 196
DP R P P P + + S R ++ R S++S PRR R
Sbjct: 152 DPQRRAREAKQPAPEPPKPYSLVRESSSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKK 211
Query: 197 SPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSDSDLSPPRNRPRHRSSDSDL 256
S S ++ + S +K S R + + S S P++R HRS+ +D
Sbjct: 212 S---SKKKKHRSESESKKRKHRSPTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADS 268
Query: 257 SPPRRRQRTKS 267
+ R++S
Sbjct: 269 ASSSDTSRSRS 279
Score = 37.4 bits (85), Expect = 0.031
Identities = 84/391 (21%), Positives = 137/391 (35%), Gaps = 48/391 (12%)
Query: 107 GGHNE--DLPSNRHFRHDTPDSSPRRVRHGTPDPSPRKDRHDTPDPSPR-RARHDTPDPS 163
G H E P++++ H +R + + PS R R +P + R R+R TP
Sbjct: 448 GSHREISSSPTSKNRSH----GRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTK- 502
Query: 164 PLRGARHDSDTSPPRRIRHDSS----DTSPPRRARHDSPDPSPPRRPQHNSSGDCQK--A 217
RG H SP R + SP RR R S P+RP + S + Q+
Sbjct: 503 --RG--HSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRS-----PQRPGWSRSRNTQRRGR 553
Query: 218 TDSDLSSPRHKQSPGHQDSDSDLSPPRNRPRHRSSDSDLSPPRRRQR----TKSSDSDLS 273
+ S H +SP + +P R R R RS +P RRR R T+ +
Sbjct: 554 SRSARRGRSHSRSPATRGRSRSRTPAR-RGRSRSR----TPARRRSRSRTPTRRRSRSRT 608
Query: 274 PPRRSQPPGKKAAHMYSGAKTGLVLTDIQREQQELKEQDQETMAFEAEFQYAETVFR--- 330
P RR + + A S ++ + R + + + T R
Sbjct: 609 PARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGR 668
Query: 331 -------DKSGRKRNLKLERLEQRRKAEKDSERDELYAQWGKGLAQSRQQQQNVEDAMKE 383
+SGR R+ R + R R + +G + SR Q+
Sbjct: 669 SRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGSSS 728
Query: 384 MQKPLARYIDDEDLDRMLRE--QEREGDPMANFIKKNKAKENKNKKVRPRYSGPAPPPNR 441
+K +R E + R + + ++K +R SG +P P +
Sbjct: 729 ERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCPKQ 788
Query: 442 FNIWPGYRWDGVDRSNGFEQKRFARLASKKA 472
+ P R RS + K +R +++
Sbjct: 789 KSQTPPRR----SRSGSSQPKAKSRTPPRRS 815
Score = 36.6 bits (83), Expect = 0.053
Identities = 69/307 (22%), Positives = 107/307 (34%), Gaps = 70/307 (22%)
Query: 127 SPRRVRHGTPDPSPRKDRHDTPDPSPRRARHDTP---DPSPLRGARHDSDTSP------- 176
+P+R R G+ +K TP R+ PS R +SD+SP
Sbjct: 1511 TPQRERSGSESSVDQKTVARTPLGQRSRSGSSQELDVKPSASPQERSESDSSPDSKAKTR 1570
Query: 177 -PRRIRH--------DSSDTSPPRRAR---------------------HDSPDPSP---- 202
P R R DS PRR+R SP+P
Sbjct: 1571 TPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPR 1630
Query: 203 --PRRPQHNSS----GDCQKATDSDLSSPRHKQSP-----GHQDSDSDLSPPRNRPRHRS 251
PRR + SS G + + S SSP H G + S + R PR RS
Sbjct: 1631 ALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRS 1690
Query: 252 SDSDLSPPRRRQRTKSSDSDLSPP--RRSQPPGKKAAHMYSGAKTGLVLTDIQREQQELK 309
S S R+ + ++ S S S P R PP + + S + ++ +
Sbjct: 1691 SRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVSSPEPA----------EKSR 1740
Query: 310 EQDQETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQRRKAEKDSERDELYAQWGKGLAQ 369
+ A + R S + R L+ R RR+ + + R + + G +
Sbjct: 1741 SSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRD---RSGSSQST 1797
Query: 370 SRQQQQN 376
SR++Q++
Sbjct: 1798 SRRRQRS 1804
Score = 33.5 bits (75), Expect = 0.44
Identities = 41/156 (26%), Positives = 60/156 (38%), Gaps = 6/156 (3%)
Query: 124 PDSSPRRVRHGTPDPSPRKDRHDTPDPSPRRARHDT---PDPSPLRGARHDSDTSPPRRI 180
P S+ RV T P + R TP +P ++R + P PS G PP +
Sbjct: 2386 PLSAYERVSGRTSPPLLDRARSRTPPSAPSQSRMTSERAPSPSSRMGQAPSQSLLPPAQD 2445
Query: 181 RHDSSDTSP-PRRARHDSPDPSPPRRPQHNSSGDCQKATDS--DLSSPRHKQSPGHQDSD 237
+ S S ++R +P Q SSG T S D + +PG SD
Sbjct: 2446 QPRSPVPSAFSDQSRCLIAQTTPVAGSQSLSSGAVATTTSSAGDHNGMLSVPAPGVPHSD 2505
Query: 238 SDLSPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLS 273
P + S+ + L P + R+ + SS S S
Sbjct: 2506 VGEPPASTGAQQPSALAALQPAKERRSSSSSSSSSS 2541
Score = 33.1 bits (74), Expect = 0.58
Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 120 RHDTPDSSPRRVRHGTPDPSPRK-DRHDTPDPSPRRARHDTPDPSPLRGARHDSDTSP 176
R +P SPR + + + R+ R D+ PS +R R +TP P P+ RH S SP
Sbjct: 2699 RRPSPQPSPRDQQSSSSERGSRRGQRGDSRSPSHKR-RRETPSPRPM---RHRSSRSP 2752
Score = 30.8 bits (68), Expect = 2.9
Identities = 32/127 (25%), Positives = 45/127 (35%), Gaps = 24/127 (18%)
Query: 183 DSSDTSPPRRARH-DSPDPSPPR-----RPQHNSSGDCQKATD----------SDLSSPR 226
D S P RRAR P P PP+ R +S K S+ SSPR
Sbjct: 147 DGSSFDPQRRAREAKQPAPEPPKPYSLVRESSSSRSPTPKQKKKKKKKDRGRRSESSSPR 206
Query: 227 HKQSPGHQDSDSDLSPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQP-PGKKA 285
++ + + +HRS P + + KS D R + P P +
Sbjct: 207 RERKKSSKKKKHRSESESKKRKHRS-------PTPKSKRKSKDKKRKRSRSTTPAPKSRR 259
Query: 286 AHMYSGA 292
AH + A
Sbjct: 260 AHRSTSA 266
>gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens]
Length = 484
Score = 47.8 bits (112), Expect = 2e-05
Identities = 62/253 (24%), Positives = 104/253 (41%), Gaps = 46/253 (18%)
Query: 136 PDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRRIRHDSSDTSPPRRARH 195
PD K RH RR R TP S RH S RR H S R+R
Sbjct: 239 PDKKEEKRRHSRSRSRSRRRR--TPSSS-----RHRRSRSRSRRRSHSKS------RSRR 285
Query: 196 DSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSDSDLSPPRNRPRHRSSDSD 255
S SP RR H+ ++ S +S + ++ +PP++ R S S
Sbjct: 286 RSK--SPRRRRSHSR----ERGRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRS- 338
Query: 256 LSPPRRRQRTKSSDSDLSPPRRSQPPGKKAAHMYSGAKTGLVLTDIQREQQELKEQDQET 315
S RRR+R++S P++ + P +K + S + ++++ K++D+E
Sbjct: 339 ASRERRRRRSRSGTRS---PKKPRSPKRKLSRSPSPRR---------HKKEKKKDKDKER 386
Query: 316 MAFEAEFQYAETVFRDKSGRKRNLKLERLEQRRKAEKDSERDELYAQWGKGLAQSRQQQQ 375
E E R S +K++ E+ ++ RK+E D + ++ + +Q
Sbjct: 387 SRDERE--------RSTSKKKKSKDKEK-DRERKSESDKDVKQVTRDY-----DEEEQGY 432
Query: 376 NVEDAMKEMQKPL 388
+ E KE +KP+
Sbjct: 433 DSEKEKKEEKKPI 445
Score = 32.3 bits (72), Expect = 0.99
Identities = 28/137 (20%), Positives = 51/137 (37%), Gaps = 12/137 (8%)
Query: 295 GLVLTDIQREQQELKEQDQETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQRRKAEKDS 354
GLV ++ + + ++ EA+ + + DK KR R RR+ S
Sbjct: 204 GLVSPSLKSDTSSKEIEEAMKRVREAQSLISAAIEPDKKEEKRRHSRSRSRSRRRRTPSS 263
Query: 355 ERDELYAQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDRMLREQEREGDPMANF 414
R + ++SR++ + + + + P R + R R + D
Sbjct: 264 SRHR------RSRSRSRRRSHSKSRSRRRSKSPRRRRSHSRERGRRSRSTSKTRD----- 312
Query: 415 IKKNKAKENKNKKVRPR 431
KK + KE K K P+
Sbjct: 313 -KKKEDKEKKRSKTPPK 328
Score = 30.8 bits (68), Expect = 2.9
Identities = 32/150 (21%), Positives = 55/150 (36%), Gaps = 9/150 (6%)
Query: 117 RHFRHDTPDSSPRRVRHGTPDPS-PRKDRHD-TPDPSPRRARHDTPDPSPLRGARHDSDT 174
R R + + RR R GT P PR + + PSPRR + + +R + +
Sbjct: 334 RRSRSASRERRRRRSRSGTRSPKKPRSPKRKLSRSPSPRRHKKEKKKDKDKERSRDERER 393
Query: 175 SPPRRIRHDSSDTSPPRRARHDSPDPSPPRRPQHNSSG-DCQKATDS-----DLSSPRHK 228
S ++ + + R++ D R G D +K + SP+ K
Sbjct: 394 STSKKKKSKDKEKDRERKSESDKDVKQVTRDYDEEEQGYDSEKEKKEEKKPIETGSPKTK 453
Query: 229 QSPGHQDSDSDLSPPR-NRPRHRSSDSDLS 257
+ + + L + N H D D+S
Sbjct: 454 ECSVEKGTGDSLRESKVNGDDHHEEDMDMS 483
>gi|50083281 KIAA1853 protein [Homo sapiens]
Length = 611
Score = 47.4 bits (111), Expect = 3e-05
Identities = 52/180 (28%), Positives = 68/180 (37%), Gaps = 10/180 (5%)
Query: 123 TPDSSPRRVRHGTPDPSPRKDR---HDTPDPS----PRRARHDTPDPSPLRGARHDSDTS 175
+P S + + P S R R + PS P+ + D+ R R S
Sbjct: 432 SPSYSSKSGKRSPPSRSSRSRRSPSYSRYSPSRERDPKYSEKDSQQRERERARRRRRSYS 491
Query: 176 PPRRIRHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQD 235
P R+ R DS RR P P RP +SSG + SS S +
Sbjct: 492 PMRKRRRDSPSHLEARRITSARKRPIPYYRPSPSSSGSLSSTSSWYSSSSSRSASRSYSR 551
Query: 236 SDS-DLSPPRNRPRHRSSDSDLSP-PRRRQRTKSSDSDLSPPRRSQPPGKKAAHMYSGAK 293
S S S R+R R SS S SP P R R++S S RSQ +A YS +
Sbjct: 552 SRSRSRSRRRSRTRTSSSSSSRSPSPGSRSRSRSRSRSRS-RSRSQSRSYSSADSYSSTR 610
Score = 43.9 bits (102), Expect = 3e-04
Identities = 37/151 (24%), Positives = 56/151 (37%), Gaps = 9/151 (5%)
Query: 135 TPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRRIRHDSSDTSPPRRAR 194
TP PS R + +R R + PSP++ + S RR S ++ R
Sbjct: 101 TPPPSSRGKKKKKKSTRKKRRRSSSYSPSPVKKKKKKSSKKHKRR-------RSFSKKRR 153
Query: 195 HDSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSDSDLSPPRNRPRHRSSDS 254
H S P RR + + H+ Q S+S S +R R RS +
Sbjct: 154 HSSSSPKSKRRDEKRHKKQSRSRPRKSHRHRHHRCPSRSQSSESRPSSCESRHRGRSPEE 213
Query: 255 DLSPPRRRQR--TKSSDSDLSPPRRSQPPGK 283
RR R +K+ D + S+PP +
Sbjct: 214 GQKSRRRHSRRCSKTLCKDSPEAQSSRPPSQ 244
Score = 40.8 bits (94), Expect = 0.003
Identities = 36/133 (27%), Positives = 53/133 (39%), Gaps = 14/133 (10%)
Query: 168 ARHDSDTSPP--RRIRHDSSDTSPPRRARHDSPDPSPPRRPQHNSS------GDCQKATD 219
A HD D +PP R + ++ +R R S PSP ++ + SS K
Sbjct: 94 ASHDKDLTPPPSSRGKKKKKKSTRKKRRRSSSYSPSPVKKKKKKSSKKHKRRRSFSKKRR 153
Query: 220 SDLSSPRHKQSPGHQDSDSDLSPPRNRPRHRSSDSDLSPPRRRQRTKSSDSDLSPPRRSQ 279
SSP+ K+ + S PR RHR P R Q ++S S R +
Sbjct: 154 HSSSSPKSKRRDEKRHKKQSRSRPRKSHRHRHHRC----PSRSQSSESRPSSCESRHRGR 209
Query: 280 PP--GKKAAHMYS 290
P G+K+ +S
Sbjct: 210 SPEEGQKSRRRHS 222
Score = 40.8 bits (94), Expect = 0.003
Identities = 48/204 (23%), Positives = 76/204 (37%), Gaps = 24/204 (11%)
Query: 104 KLLGGHNEDLPSNRHFRHDTPDSSPRRVRHGTPDPSPRKDR-HDTPDPSPRRARHDTPDP 162
+L G+ D S F +P + + + +P R+ R +P + + P
Sbjct: 321 ELNSGNTSD--SGNSFTTSSPQNKGAMLENLSPTSRGRESRGFQSPCLECAEVKKSSLVP 378
Query: 163 SPLRGARHDSDTSPPRRIRHDSSDTSPPRRARHDSPDPSPPRRPQHNSSGDCQKATDSDL 222
S R S P + SS + R + H S P+P P++ S S
Sbjct: 379 STAR--------SSPMKGCSRSSSYASTRSSSHSSRSPNPRASPRYTQSRSTSSEKRSYS 430
Query: 223 SSPRH-----KQSPGHQDSDSDLSPPRNR--------PRHRSSDSDLSPPRRRQRTKSSD 269
SP + K+SP + S S SP +R P++ DS R +R + S
Sbjct: 431 RSPSYSSKSGKRSPPSRSSRSRRSPSYSRYSPSRERDPKYSEKDSQQRERERARRRRRSY 490
Query: 270 SDLSPPRRSQPPGKKAAHMYSGAK 293
S + RR P +A + S K
Sbjct: 491 SPMRKRRRDSPSHLEARRITSARK 514
>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 828
Score = 46.6 bits (109), Expect = 5e-05
Identities = 32/127 (25%), Positives = 66/127 (51%), Gaps = 8/127 (6%)
Query: 283 KKAAHMYSGAKTGLVLTDIQREQQELKEQDQETMAFEAEFQYAETVFRDKSG--RKRNLK 340
++A + +T + ++ R+++EL+EQ+++ E + E R++ G R++ K
Sbjct: 218 ERAKFLLPQVQTNTLQEEMWRQEEELREQEKKIRKQEEKMWRQEERLREQEGKMREQEEK 277
Query: 341 LERLEQR-RKAEKDSERDELYAQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDR 399
+ R E+R R+ EK+ E + K L + +Q Q E+ M E ++ + E ++
Sbjct: 278 MRRQEKRLREQEKELREQEKELREQKKLREQEEQMQEQEEKMWEQEEKMR-----EQEEK 332
Query: 400 MLREQER 406
M R++ER
Sbjct: 333 MWRQEER 339
Score = 35.0 bits (79), Expect = 0.15
Identities = 26/130 (20%), Positives = 64/130 (49%), Gaps = 9/130 (6%)
Query: 302 QREQQELKEQDQETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQ--RRKAEKDSERDEL 359
++ ++E K Q+QE ++ E E + ++ R+R K+ E+ R + EK E++E
Sbjct: 534 EKMREEKKTQEQEKKTWDQE----EKMREEERMREREKKMREEEEMMREQEEKMQEQEEK 589
Query: 360 YAQWGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDRMLREQEREGDPMANFIKKNK 419
+ + + + ++ Q E+ M E ++ + + E+ D+M ++E + ++ +
Sbjct: 590 MREQEEKMWEQEEKMQEQEEKMWEQEEKMW---EQEEEDKMQEQEEMMWEQEEKMQEQEE 646
Query: 420 AKENKNKKVR 429
+ +K+R
Sbjct: 647 KMWEQEEKMR 656
Score = 33.9 bits (76), Expect = 0.34
Identities = 34/144 (23%), Positives = 69/144 (47%), Gaps = 17/144 (11%)
Query: 303 REQQELKEQDQETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQRRKAEKDSERDE---- 358
R+++ L+EQ+ + E + + E R++ R + E EQ++ E++ + E
Sbjct: 259 RQEERLREQEGKMREQEEKMRRQEKRLREQEKELREQEKELREQKKLREQEEQMQEQEEK 318
Query: 359 LYAQWGKGLAQSR---QQQQNVEDAMKEMQKPLARYIDDE----DLDRMLREQE---REG 408
++ Q K Q +Q++ + + K+M++ + D E + D LRE+E RE
Sbjct: 319 MWEQEEKMREQEEKMWRQEERLWEQEKQMREQEQKMRDQEERMWEQDERLREKEERMREQ 378
Query: 409 DPMANFIKKNKAKE---NKNKKVR 429
+ M +K + +E + KK+R
Sbjct: 379 EKMWEQEEKMQEEERIREREKKMR 402
Score = 33.9 bits (76), Expect = 0.34
Identities = 23/128 (17%), Positives = 63/128 (49%), Gaps = 3/128 (2%)
Query: 304 EQQELKEQDQETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQRRKAEKDSERDELYAQW 363
EQ++++EQ+++ E + + E ++ + R K+ E + +++ RD+ W
Sbjct: 444 EQEKMQEQEEKIWEQEEKIRDQEEMWGQEKKMWRQEKMREQEDQMWEQEEKMRDQEQKMW 503
Query: 364 G--KGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDRMLREQEREGDPMANFIKKNKAK 421
+ + + ++ + E+ M+E QK + + + ++ +EQE++ +++ +
Sbjct: 504 DQEERMWEQDERLREKEERMRE-QKKMWQQEEKMREEKKTQEQEKKTWDQEEKMREEERM 562
Query: 422 ENKNKKVR 429
+ KK+R
Sbjct: 563 REREKKMR 570
Score = 33.1 bits (74), Expect = 0.58
Identities = 23/119 (19%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Query: 305 QQELKEQDQETMAFEAEFQYAETVFRDKSGR--KRNLKLERLEQRRKAEKDSERDELYAQ 362
Q++++EQ+ + E + + E D+ R +++ +L E+R + +K + E +
Sbjct: 478 QEKMREQEDQMWEQEEKMRDQEQKMWDQEERMWEQDERLREKEERMREQKKMWQQEEKMR 537
Query: 363 WGKGLAQSRQQQQNVEDAMKEMQKPLARYIDDEDLDRMLREQEREGDPMANFIKKNKAK 421
K + ++ + E+ M+E ++ R + + M+REQE + +++ + K
Sbjct: 538 EEKKTQEQEKKTWDQEEKMREEERMREREKKMREEEEMMREQEEKMQEQEEKMREQEEK 596
Score = 31.2 bits (69), Expect = 2.2
Identities = 19/85 (22%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 302 QREQQELKEQDQETMAFEAEFQYAETVFRDKSGRKRNLKLERLEQRRKAEKDSERDELYA 361
Q +QE K +DQE +E + + E +++ R++ E+ E+ ++ E+ ER++
Sbjct: 346 QMREQEQKMRDQEERMWEQDERLRE---KEERMREQEKMWEQEEKMQEEERIREREKKMR 402
Query: 362 QWGKGLAQSRQQQQNVEDAMKEMQK 386
+ + + + ++ Q E+ M E ++
Sbjct: 403 EEEETMREQEEKMQKQEENMWEQEE 427
Score = 30.8 bits (68), Expect = 2.9
Identities = 28/137 (20%), Positives = 67/137 (48%), Gaps = 14/137 (10%)
Query: 300 DIQREQQELKEQDQETMAFEAEFQYAETVFRDKSGRK-RNLKLERLEQR--RKAEKDSER 356
+ REQ+E ++ +E M + E ++ + ++ + K++ E++ + EK ++
Sbjct: 406 ETMREQEEKMQKQEENMWEQEEKEWQQQRLPEQKEKLWEQEKMQEQEEKIWEQEEKIRDQ 465
Query: 357 DELYAQWGKGLAQSRQQQQNVEDAMKEMQKPL----ARYIDDEDL-----DRMLREQERE 407
+E++ Q K Q + ++Q ED M E ++ + + D E+ +R+ ++ER
Sbjct: 466 EEMWGQEKKMWRQEKMREQ--EDQMWEQEEKMRDQEQKMWDQEERMWEQDERLREKEERM 523
Query: 408 GDPMANFIKKNKAKENK 424
+ + ++ K +E K
Sbjct: 524 REQKKMWQQEEKMREEK 540
>gi|113415504 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 46.2 bits (108), Expect = 7e-05
Identities = 38/143 (26%), Positives = 53/143 (37%), Gaps = 7/143 (4%)
Query: 136 PDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRRIRHDSSDTSPPRRARH 195
P P+ RKDR D + + T + S R + R RH +S S R+R
Sbjct: 26 PSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKT------RKRHSASSGSSSTRSRS 79
Query: 196 DSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSDSDLSPPRNR-PRHRSSDS 254
S S +SSG + S S +S S SP R R R S S
Sbjct: 80 SSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRS 139
Query: 255 DLSPPRRRQRTKSSDSDLSPPRR 277
PP+R ++ + S P +
Sbjct: 140 KSKPPKRDEKERKRRSPSPKPTK 162
Score = 33.1 bits (74), Expect = 0.58
Identities = 42/175 (24%), Positives = 62/175 (35%), Gaps = 23/175 (13%)
Query: 127 SPRRVRHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRRIRHDSSD 186
SP R RH S K + D R+ R +P P+ + R R + D
Sbjct: 125 SPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLT------RNVTKDHIM 178
Query: 187 TSPPRRARHDSPDPSPPRRPQHNSSG-DCQKATDSDLSSPRHKQSPGHQDSDSDLSP--- 242
+ D R H S G C + + D + K G Q +++
Sbjct: 179 EIFSTYGKIKMIDMPVERMHPHLSKGYACVEFENPDEAEKALKHMDGGQIDGQEITATVV 238
Query: 243 ----PRNRPRHRSSDSDL---------SPPRRRQRTKSSDSDLSPPRRSQPPGKK 284
PR PR S + SPPR R+R++S RRS+ PG++
Sbjct: 239 LAPWPRPTPRRFSPPRRMLPPPPMWLRSPPRMRRRSRSPRRRSPVRRRSRSPGRR 293
>gi|169166499 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 46.2 bits (108), Expect = 7e-05
Identities = 38/143 (26%), Positives = 53/143 (37%), Gaps = 7/143 (4%)
Query: 136 PDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRRIRHDSSDTSPPRRARH 195
P P+ RKDR D + + T + S R + R RH +S S R+R
Sbjct: 26 PSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKT------RKRHSASSGSSSTRSRS 79
Query: 196 DSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSDSDLSPPRNR-PRHRSSDS 254
S S +SSG + S S +S S SP R R R S S
Sbjct: 80 SSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRS 139
Query: 255 DLSPPRRRQRTKSSDSDLSPPRR 277
PP+R ++ + S P +
Sbjct: 140 KSKPPKRDEKERKRRSPSPKPTK 162
Score = 33.1 bits (74), Expect = 0.58
Identities = 42/175 (24%), Positives = 62/175 (35%), Gaps = 23/175 (13%)
Query: 127 SPRRVRHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRRIRHDSSD 186
SP R RH S K + D R+ R +P P+ + R R + D
Sbjct: 125 SPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLT------RNVTKDHIM 178
Query: 187 TSPPRRARHDSPDPSPPRRPQHNSSG-DCQKATDSDLSSPRHKQSPGHQDSDSDLSP--- 242
+ D R H S G C + + D + K G Q +++
Sbjct: 179 EIFSTYGKIKMIDMPVERMHPHLSKGYACVEFENPDEAEKALKHMDGGQIDGQEITATVV 238
Query: 243 ----PRNRPRHRSSDSDL---------SPPRRRQRTKSSDSDLSPPRRSQPPGKK 284
PR PR S + SPPR R+R++S RRS+ PG++
Sbjct: 239 LAPWPRPTPRRFSPPRRMLPPPPMWLRSPPRMRRRSRSPRRRSPVRRRSRSPGRR 293
>gi|113415498 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 46.2 bits (108), Expect = 7e-05
Identities = 38/143 (26%), Positives = 53/143 (37%), Gaps = 7/143 (4%)
Query: 136 PDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRRIRHDSSDTSPPRRARH 195
P P+ RKDR D + + T + S R + R RH +S S R+R
Sbjct: 26 PSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKT------RKRHSASSGSSSTRSRS 79
Query: 196 DSPDPSPPRRPQHNSSGDCQKATDSDLSSPRHKQSPGHQDSDSDLSPPRNR-PRHRSSDS 254
S S +SSG + S S +S S SP R R R S S
Sbjct: 80 SSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRS 139
Query: 255 DLSPPRRRQRTKSSDSDLSPPRR 277
PP+R ++ + S P +
Sbjct: 140 KSKPPKRDEKERKRRSPSPKPTK 162
Score = 33.1 bits (74), Expect = 0.58
Identities = 42/175 (24%), Positives = 62/175 (35%), Gaps = 23/175 (13%)
Query: 127 SPRRVRHGTPDPSPRKDRHDTPDPSPRRARHDTPDPSPLRGARHDSDTSPPRRIRHDSSD 186
SP R RH S K + D R+ R +P P+ + R R + D
Sbjct: 125 SPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPSPKPTKVHIGRLT------RNVTKDHIM 178
Query: 187 TSPPRRARHDSPDPSPPRRPQHNSSG-DCQKATDSDLSSPRHKQSPGHQDSDSDLSP--- 242
+ D R H S G C + + D + K G Q +++
Sbjct: 179 EIFSTYGKIKMIDMPVERMHPHLSKGYACVEFENPDEAEKALKHMDGGQIDGQEITATVV 238
Query: 243 ----PRNRPRHRSSDSDL---------SPPRRRQRTKSSDSDLSPPRRSQPPGKK 284
PR PR S + SPPR R+R++S RRS+ PG++
Sbjct: 239 LAPWPRPTPRRFSPPRRMLPPPPMWLRSPPRMRRRSRSPRRRSPVRRRSRSPGRR 293
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.129 0.382
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,478,232
Number of Sequences: 37866
Number of extensions: 1512308
Number of successful extensions: 11978
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 166
Number of HSP's successfully gapped in prelim test: 920
Number of HSP's that attempted gapping in prelim test: 8094
Number of HSP's gapped (non-prelim): 3261
length of query: 485
length of database: 18,247,518
effective HSP length: 106
effective length of query: 379
effective length of database: 14,233,722
effective search space: 5394580638
effective search space used: 5394580638
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.