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Search of human proteins with 229331967
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|229331967 RIO kinase 2 isoform 1 [Homo sapiens]
(552 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|229331967 RIO kinase 2 isoform 1 [Homo sapiens] 1110 0.0
gi|229331971 RIO kinase 2 isoform 2 [Homo sapiens] 945 0.0
gi|23510356 RIO kinase 1 isoform 1 [Homo sapiens] 61 2e-09
gi|22325377 sudD suppressor of bimD6 homolog [Homo sapiens] 50 7e-06
gi|23510358 RIO kinase 1 isoform 2 [Homo sapiens] 48 2e-05
gi|118600963 Nik related kinase [Homo sapiens] 41 0.003
gi|253970456 HIV-1 Tat specific factor 1 [Homo sapiens] 40 0.006
gi|21361437 HIV-1 Tat specific factor 1 [Homo sapiens] 40 0.006
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 40 0.007
gi|207029299 NIMA-related kinase 10 isoform 3 [Homo sapiens] 39 0.012
gi|224589071 BMS1-like, ribosome assembly protein [Homo sapiens] 39 0.016
gi|162287219 prune homolog 2 [Homo sapiens] 36 0.10
gi|55741661 hypothetical protein LOC57653 [Homo sapiens] 36 0.10
gi|15451902 mitogen-activated protein kinase kinase kinase kinas... 35 0.14
gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens] 34 0.31
gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens] 34 0.31
gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof... 34 0.31
gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isof... 34 0.31
gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isof... 34 0.31
gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isof... 34 0.31
gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins) isof... 34 0.31
gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isof... 34 0.31
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 34 0.31
gi|4504487 histidine rich calcium binding protein precursor [Hom... 34 0.40
gi|47157322 protein kinase C, beta isoform 1 [Homo sapiens] 33 0.52
gi|20127450 protein kinase C, beta isoform 2 [Homo sapiens] 33 0.52
gi|118421089 chromodomain helicase DNA binding protein 2 isoform... 33 0.52
gi|110611184 chromodomain helicase DNA binding protein 2 isoform... 33 0.52
gi|16117781 F-box and WD repeat domain containing 7 isoform 1 [H... 33 0.68
gi|4506067 protein kinase C, alpha [Homo sapiens] 33 0.89
>gi|229331967 RIO kinase 2 isoform 1 [Homo sapiens]
Length = 552
Score = 1110 bits (2871), Expect = 0.0
Identities = 552/552 (100%), Positives = 552/552 (100%)
Query: 1 MGKVNVAKLRYMSRDDFRVLTAVEMGMKNHEIVPGSLIASIASLKHGGCNKVLRELVKHK 60
MGKVNVAKLRYMSRDDFRVLTAVEMGMKNHEIVPGSLIASIASLKHGGCNKVLRELVKHK
Sbjct: 1 MGKVNVAKLRYMSRDDFRVLTAVEMGMKNHEIVPGSLIASIASLKHGGCNKVLRELVKHK 60
Query: 61 LIAWERTKTVQGYRLTNAGYDYLALKTLSSRQVVESVGNQMGVGKESDIYIVANEEGQQF 120
LIAWERTKTVQGYRLTNAGYDYLALKTLSSRQVVESVGNQMGVGKESDIYIVANEEGQQF
Sbjct: 61 LIAWERTKTVQGYRLTNAGYDYLALKTLSSRQVVESVGNQMGVGKESDIYIVANEEGQQF 120
Query: 121 ALKLHRLGRTSFRNLKNKRDYHKHRHNVSWLYLSRLSAMKEFAYMKALYERKFPVPKPID 180
ALKLHRLGRTSFRNLKNKRDYHKHRHNVSWLYLSRLSAMKEFAYMKALYERKFPVPKPID
Sbjct: 121 ALKLHRLGRTSFRNLKNKRDYHKHRHNVSWLYLSRLSAMKEFAYMKALYERKFPVPKPID 180
Query: 181 YNRHAVVMELINGYPLCQIHHVEDPASVYDEAMELIVKLANHGLIHGDFNEFNLILDESD 240
YNRHAVVMELINGYPLCQIHHVEDPASVYDEAMELIVKLANHGLIHGDFNEFNLILDESD
Sbjct: 181 YNRHAVVMELINGYPLCQIHHVEDPASVYDEAMELIVKLANHGLIHGDFNEFNLILDESD 240
Query: 241 HITMIDFPQMVSTSHPNAEWYFDRDVKCIKDFFMKRFSYESELFPTFKDIRREDTLDVEV 300
HITMIDFPQMVSTSHPNAEWYFDRDVKCIKDFFMKRFSYESELFPTFKDIRREDTLDVEV
Sbjct: 241 HITMIDFPQMVSTSHPNAEWYFDRDVKCIKDFFMKRFSYESELFPTFKDIRREDTLDVEV 300
Query: 301 SASGYTKEMQADDELLHPLGPDDKNIETKEGSEFSFSDGEVAEKAEVYGSENESERNCLE 360
SASGYTKEMQADDELLHPLGPDDKNIETKEGSEFSFSDGEVAEKAEVYGSENESERNCLE
Sbjct: 301 SASGYTKEMQADDELLHPLGPDDKNIETKEGSEFSFSDGEVAEKAEVYGSENESERNCLE 360
Query: 361 ESEGCYCRSSGDPEQIKEDSLSEESADARSFEMTEFNQALEEIKGQVVENNSVTEFSEEK 420
ESEGCYCRSSGDPEQIKEDSLSEESADARSFEMTEFNQALEEIKGQVVENNSVTEFSEEK
Sbjct: 361 ESEGCYCRSSGDPEQIKEDSLSEESADARSFEMTEFNQALEEIKGQVVENNSVTEFSEEK 420
Query: 421 NRTENYNRQDGQRVQGGVPAGSDEYEDECPHLIALSSLNREFRPFRDEENVGAMNQYRTR 480
NRTENYNRQDGQRVQGGVPAGSDEYEDECPHLIALSSLNREFRPFRDEENVGAMNQYRTR
Sbjct: 421 NRTENYNRQDGQRVQGGVPAGSDEYEDECPHLIALSSLNREFRPFRDEENVGAMNQYRTR 480
Query: 481 TLSITSSGSAVSCSTIPPELVKQKVKRQLTKQQKSAVRRRLQKGEANIFTKQRRENMQNI 540
TLSITSSGSAVSCSTIPPELVKQKVKRQLTKQQKSAVRRRLQKGEANIFTKQRRENMQNI
Sbjct: 481 TLSITSSGSAVSCSTIPPELVKQKVKRQLTKQQKSAVRRRLQKGEANIFTKQRRENMQNI 540
Query: 541 KSSLEAASFWGE 552
KSSLEAASFWGE
Sbjct: 541 KSSLEAASFWGE 552
>gi|229331971 RIO kinase 2 isoform 2 [Homo sapiens]
Length = 474
Score = 945 bits (2443), Expect = 0.0
Identities = 466/466 (100%), Positives = 466/466 (100%)
Query: 1 MGKVNVAKLRYMSRDDFRVLTAVEMGMKNHEIVPGSLIASIASLKHGGCNKVLRELVKHK 60
MGKVNVAKLRYMSRDDFRVLTAVEMGMKNHEIVPGSLIASIASLKHGGCNKVLRELVKHK
Sbjct: 1 MGKVNVAKLRYMSRDDFRVLTAVEMGMKNHEIVPGSLIASIASLKHGGCNKVLRELVKHK 60
Query: 61 LIAWERTKTVQGYRLTNAGYDYLALKTLSSRQVVESVGNQMGVGKESDIYIVANEEGQQF 120
LIAWERTKTVQGYRLTNAGYDYLALKTLSSRQVVESVGNQMGVGKESDIYIVANEEGQQF
Sbjct: 61 LIAWERTKTVQGYRLTNAGYDYLALKTLSSRQVVESVGNQMGVGKESDIYIVANEEGQQF 120
Query: 121 ALKLHRLGRTSFRNLKNKRDYHKHRHNVSWLYLSRLSAMKEFAYMKALYERKFPVPKPID 180
ALKLHRLGRTSFRNLKNKRDYHKHRHNVSWLYLSRLSAMKEFAYMKALYERKFPVPKPID
Sbjct: 121 ALKLHRLGRTSFRNLKNKRDYHKHRHNVSWLYLSRLSAMKEFAYMKALYERKFPVPKPID 180
Query: 181 YNRHAVVMELINGYPLCQIHHVEDPASVYDEAMELIVKLANHGLIHGDFNEFNLILDESD 240
YNRHAVVMELINGYPLCQIHHVEDPASVYDEAMELIVKLANHGLIHGDFNEFNLILDESD
Sbjct: 181 YNRHAVVMELINGYPLCQIHHVEDPASVYDEAMELIVKLANHGLIHGDFNEFNLILDESD 240
Query: 241 HITMIDFPQMVSTSHPNAEWYFDRDVKCIKDFFMKRFSYESELFPTFKDIRREDTLDVEV 300
HITMIDFPQMVSTSHPNAEWYFDRDVKCIKDFFMKRFSYESELFPTFKDIRREDTLDVEV
Sbjct: 241 HITMIDFPQMVSTSHPNAEWYFDRDVKCIKDFFMKRFSYESELFPTFKDIRREDTLDVEV 300
Query: 301 SASGYTKEMQADDELLHPLGPDDKNIETKEGSEFSFSDGEVAEKAEVYGSENESERNCLE 360
SASGYTKEMQADDELLHPLGPDDKNIETKEGSEFSFSDGEVAEKAEVYGSENESERNCLE
Sbjct: 301 SASGYTKEMQADDELLHPLGPDDKNIETKEGSEFSFSDGEVAEKAEVYGSENESERNCLE 360
Query: 361 ESEGCYCRSSGDPEQIKEDSLSEESADARSFEMTEFNQALEEIKGQVVENNSVTEFSEEK 420
ESEGCYCRSSGDPEQIKEDSLSEESADARSFEMTEFNQALEEIKGQVVENNSVTEFSEEK
Sbjct: 361 ESEGCYCRSSGDPEQIKEDSLSEESADARSFEMTEFNQALEEIKGQVVENNSVTEFSEEK 420
Query: 421 NRTENYNRQDGQRVQGGVPAGSDEYEDECPHLIALSSLNREFRPFR 466
NRTENYNRQDGQRVQGGVPAGSDEYEDECPHLIALSSLNREFRPFR
Sbjct: 421 NRTENYNRQDGQRVQGGVPAGSDEYEDECPHLIALSSLNREFRPFR 466
>gi|23510356 RIO kinase 1 isoform 1 [Homo sapiens]
Length = 568
Score = 61.2 bits (147), Expect = 2e-09
Identities = 51/210 (24%), Positives = 97/210 (46%), Gaps = 24/210 (11%)
Query: 83 LALKTLSSRQVVESVGNQMGVGKESDIYIVANEEGQQFALKLHRLGRTSFRNLKNKRDY- 141
+ L + +R ++ + + GKE+++Y + G+ A+K+++ TS K++ Y
Sbjct: 168 MILFKMLTRGIITEINGCISTGKEANVYHASTANGESRAIKIYK---TSILVFKDRDKYV 224
Query: 142 ---HKHRHNV---SWLYLSRLSAMKEFAYMKALYERKFPVPKPIDYNRHAVVMELI--NG 193
+ RH + + + A KE + L + P P+PI H +VM I +
Sbjct: 225 SGEFRFRHGYCKGNPRKMVKTWAEKEMRNLIRLNTAEIPCPEPIMLRSHVLVMSFIGKDD 284
Query: 194 YPLCQIHHVEDPASVYDEAMELIVKLANH--------GLIHGDFNEFNLILDESDHITMI 245
P + +V+ S +A EL +++ + L+H D +EFN++ + +I
Sbjct: 285 MPAPLLKNVQLSES---KARELYLQVIQYMRRMYQDARLVHADLSEFNMLY-HGGGVYII 340
Query: 246 DFPQMVSTSHPNAEWYFDRDVKCIKDFFMK 275
D Q V HP+A + +D + DFFM+
Sbjct: 341 DVSQSVEHDHPHALEFLRKDCANVNDFFMR 370
>gi|22325377 sudD suppressor of bimD6 homolog [Homo sapiens]
Length = 519
Score = 49.7 bits (117), Expect = 7e-06
Identities = 65/286 (22%), Positives = 118/286 (41%), Gaps = 33/286 (11%)
Query: 73 YRLTNAGYDYLALKTLSSRQ---VVESVGNQMGVGKESDIYIVANEEGQQFALKLHRLGR 129
Y++ N+G +S+ + V + G M KE D ++ E A+K+ +
Sbjct: 242 YKMVNSGMLETITGCISTGKESVVFHAYGGSMEDEKE-DSKVIPTE----CAIKVFKTTL 296
Query: 130 TSFRNL-KNKRDYHKHRHNVSWLY---LSRLSAMKEFAYMKALYERKFPVPKPIDYNRHA 185
F+N K +D + + S L + R+ A KE + + P P + +H
Sbjct: 297 NEFKNRDKYIKDDFRFKDRFSKLNPRKIIRMWAEKEMHNLARMQRAGIPCPTVVLLKKHI 356
Query: 186 VVMELI--NGYPLCQIHHV----EDPASVYDEAMELIVKLANH-GLIHGDFNEFNLILDE 238
+VM I + P ++ V E+ Y + + L+ +L + L+H D +E+N++
Sbjct: 357 LVMSFIGHDQVPAPKLKEVKLNSEEMKEAYYQTLHLMRQLYHECTLVHADLSEYNMLW-H 415
Query: 239 SDHITMIDFPQMVSTSHPNAEWYFDRDVKCIKDFFMKRFSYESELFPTFKDIRREDTLDV 298
+ + +ID Q V +HP+ + RD + + FF K K+ E L
Sbjct: 416 AGKVWLIDVSQSVEPTHPHGLEFLFRDCRNVSQFFQK---------GGVKEALSERELFN 466
Query: 299 EVSASGYTKEMQAD----DELLHPLGPDDKNIETKEGSEFSFSDGE 340
VS T + +AD E L + D ++ + F DG+
Sbjct: 467 AVSGLNITADNEADFLAEIEALEKMNEDHVQKNGRKAASFLKDDGD 512
>gi|23510358 RIO kinase 1 isoform 2 [Homo sapiens]
Length = 327
Score = 48.1 bits (113), Expect = 2e-05
Identities = 36/128 (28%), Positives = 60/128 (46%), Gaps = 14/128 (10%)
Query: 158 AMKEFAYMKALYERKFPVPKPIDYNRHAVVMELI--NGYPLCQIHHVEDPASVYDEAMEL 215
A KE + L + P P+PI H +VM I + P + +V+ S +A EL
Sbjct: 6 AEKEMRNLIRLNTAEIPCPEPIMLRSHVLVMSFIGKDDMPAPLLKNVQLSES---KAREL 62
Query: 216 IVKLANH--------GLIHGDFNEFNLILDESDHITMIDFPQMVSTSHPNAEWYFDRDVK 267
+++ + L+H D +EFN++ + +ID Q V HP+A + +D
Sbjct: 63 YLQVIQYMRRMYQDARLVHADLSEFNMLY-HGGGVYIIDVSQSVEHDHPHALEFLRKDCA 121
Query: 268 CIKDFFMK 275
+ DFFM+
Sbjct: 122 NVNDFFMR 129
>gi|118600963 Nik related kinase [Homo sapiens]
Length = 1582
Score = 40.8 bits (94), Expect = 0.003
Identities = 41/217 (18%), Positives = 91/217 (41%), Gaps = 29/217 (13%)
Query: 96 SVGNQMGVGKESDIYIVANEEGQQF-ALKLHRLGRTSFRNLKNKRDYHKHRHNVSWLYL- 153
S+ +G+G IY+ +E+ F A+K+ +T + + +K++ +V W Y
Sbjct: 26 SLDKTIGLGTYGRIYLGLHEKTGAFTAVKVMNARKTPLPEIGRRVRVNKYQKSVGWRYSD 85
Query: 154 ------SRLSAMKEFAYMK---ALYERKFPVPKPIDYNRHAVVMELINGYPLCQIHHVED 204
+ L+ ++++++ K + Y F + P ++ +VMEL + + +
Sbjct: 86 EEEDLRTELNLLRKYSFHKNIVSFYGAFFKLSPPGQRHQLWMVMELCAAGSVTDVVRMTS 145
Query: 205 PASVYD--------EAMELIVKLANHGLIHGDFNEFNLILDESDHITMIDFPQMVSTSHP 256
S+ + E ++ + L H +IH D N++L + + ++DF S
Sbjct: 146 NQSLKEDWIAYICREILQGLAHLHAHRVIHRDIKGQNVLLTHNAEVKLVDFGVSAQVSRT 205
Query: 257 NAE---------WYFDRDVKCIKDFFMKRFSYESELF 284
N W + C +D + + Y S+++
Sbjct: 206 NGRRNSFIGTPYWMAPEVIDCDED-PRRSYDYRSDVW 241
>gi|253970456 HIV-1 Tat specific factor 1 [Homo sapiens]
Length = 755
Score = 40.0 bits (92), Expect = 0.006
Identities = 40/163 (24%), Positives = 66/163 (40%), Gaps = 9/163 (5%)
Query: 293 EDTLDVEVSAS-GYTKEMQADDELLHPLGPDDKNIETKEGSEFSFSDGEVAEKAEVYGSE 351
ED L+ E G TKE + DD D ++++GSE F + + + + GSE
Sbjct: 522 EDDLNKESEEEVGPTKESEEDDSEKES-DEDCSEKQSEDGSEREFEENGLEKDLDEEGSE 580
Query: 352 NESERNCLE------ESEGCYCRSSGDPEQIKEDSLSEESADARSFEMTEFNQALEEIKG 405
E N L+ +SE G E++ ++ SE D S E E E++
Sbjct: 581 KELHENVLDKELEENDSENSEFEDDGS-EKVLDEEGSEREFDEDSDEKEEEEDTYEKVFD 639
Query: 406 QVVENNSVTEFSEEKNRTENYNRQDGQRVQGGVPAGSDEYEDE 448
+ E+++EK + + + SD+ EDE
Sbjct: 640 DESDEKEDEEYADEKGLEAADKKAEEGDADEKLFEESDDKEDE 682
Score = 32.7 bits (73), Expect = 0.89
Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 14/131 (10%)
Query: 322 DDKNIE-TKEGSEFSFSDGEVAEKAEVYGSENESERNC--LEESEGCYCRSSGDPEQIKE 378
D+K E T++G EF +G A+ E E+E C E EGC P++ E
Sbjct: 427 DEKKFEKTEDGGEFE--EGASENNAKESSPEKEAEEGCPEKESEEGC-------PKRGFE 477
Query: 379 DSLSE-ESADARSFEMTEFNQALEEIKGQVVENNSVTEFSEEKNRTENYNRQDGQRVQGG 437
S S+ ES + +E + +E K + ++N+ E K ++ N++ + V
Sbjct: 478 GSCSQKESEEGNPVRGSEEDSPKKESKKKTLKND-CEENGLAKESEDDLNKESEEEVGPT 536
Query: 438 VPAGSDEYEDE 448
+ D+ E E
Sbjct: 537 KESEEDDSEKE 547
>gi|21361437 HIV-1 Tat specific factor 1 [Homo sapiens]
Length = 755
Score = 40.0 bits (92), Expect = 0.006
Identities = 40/163 (24%), Positives = 66/163 (40%), Gaps = 9/163 (5%)
Query: 293 EDTLDVEVSAS-GYTKEMQADDELLHPLGPDDKNIETKEGSEFSFSDGEVAEKAEVYGSE 351
ED L+ E G TKE + DD D ++++GSE F + + + + GSE
Sbjct: 522 EDDLNKESEEEVGPTKESEEDDSEKES-DEDCSEKQSEDGSEREFEENGLEKDLDEEGSE 580
Query: 352 NESERNCLE------ESEGCYCRSSGDPEQIKEDSLSEESADARSFEMTEFNQALEEIKG 405
E N L+ +SE G E++ ++ SE D S E E E++
Sbjct: 581 KELHENVLDKELEENDSENSEFEDDGS-EKVLDEEGSEREFDEDSDEKEEEEDTYEKVFD 639
Query: 406 QVVENNSVTEFSEEKNRTENYNRQDGQRVQGGVPAGSDEYEDE 448
+ E+++EK + + + SD+ EDE
Sbjct: 640 DESDEKEDEEYADEKGLEAADKKAEEGDADEKLFEESDDKEDE 682
Score = 32.7 bits (73), Expect = 0.89
Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 14/131 (10%)
Query: 322 DDKNIE-TKEGSEFSFSDGEVAEKAEVYGSENESERNC--LEESEGCYCRSSGDPEQIKE 378
D+K E T++G EF +G A+ E E+E C E EGC P++ E
Sbjct: 427 DEKKFEKTEDGGEFE--EGASENNAKESSPEKEAEEGCPEKESEEGC-------PKRGFE 477
Query: 379 DSLSE-ESADARSFEMTEFNQALEEIKGQVVENNSVTEFSEEKNRTENYNRQDGQRVQGG 437
S S+ ES + +E + +E K + ++N+ E K ++ N++ + V
Sbjct: 478 GSCSQKESEEGNPVRGSEEDSPKKESKKKTLKND-CEENGLAKESEDDLNKESEEEVGPT 536
Query: 438 VPAGSDEYEDE 448
+ D+ E E
Sbjct: 537 KESEEDDSEKE 547
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 39.7 bits (91), Expect = 0.007
Identities = 36/127 (28%), Positives = 57/127 (44%), Gaps = 20/127 (15%)
Query: 323 DKNIETKEGSEFSFSDGEVAEKAEVYGSENESERNCLEESEGCYCRSSGDPEQIKEDSLS 382
++N E +EG E +GE E E +R EE EG + G+ E+++ +
Sbjct: 722 ERNQEMEEGGEEEHGEGE----------EEEGDREEEEEKEG-EGKEEGEGEEVEGEREK 770
Query: 383 EESADARSFEMTEFNQALEEIKGQVVENNSVTEFSEEKNRTENYNRQDGQRVQGG-VPAG 441
EE E + +A +E KG+ E E EE+ +++G V+GG V G
Sbjct: 771 EEG------ERKKEERAGKEEKGE--EEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEG 822
Query: 442 SDEYEDE 448
E E+E
Sbjct: 823 KGEREEE 829
Score = 32.0 bits (71), Expect = 1.5
Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 7/115 (6%)
Query: 327 ETKEGSEFSFSDGEVAEKAEVYGSENESERNCLEESEGCYCRSSGDPEQIKEDSLSEESA 386
E +EG E +GE E+ E G E E E E EG G+ E+ +E+ E
Sbjct: 991 EEEEGEEEGEEEGEGEEEGEGEG-EEEEEGEVEGEVEGEEGEGEGEEEEGEEEG-EEREK 1048
Query: 387 DARSFEMTEFNQALEEIKGQVVENNSVTEFSEEKNRTENYNRQDGQRVQGGVPAG 441
+ E + EE +G+ E EE R + + +++G V G
Sbjct: 1049 EGEGEENRRNREEEEEEEGKYQETG-----EEENERQDGEEYKKVSKIKGSVKYG 1098
Score = 30.8 bits (68), Expect = 3.4
Identities = 35/156 (22%), Positives = 60/156 (38%), Gaps = 22/156 (14%)
Query: 322 DDKNIETKEGSEFSFSDGEVAEKAEV-----------YGSENESERNCLE---ESEGCYC 367
+++ E EG E +GE E+ EV G E E E E E EG
Sbjct: 996 EEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEEN 1055
Query: 368 RSSGDPEQIKEDSLSEESADARSFEMTEFNQALEEIKGQVVENNSVTEFSEEKNRTENYN 427
R + + E+ +E E + + E + + +IKG V T + T+
Sbjct: 1056 RRNREEEEEEEGKYQETGEEENERQDGEEYKKVSKIKGSVKYGKHKTYQKKSVTNTQGNG 1115
Query: 428 RQ-------DGQRVQGGVPAGSDEY-EDECPHLIAL 455
++ +R+ P+GS ++ + PH + L
Sbjct: 1116 KEQRSKMPVQSKRLLKNGPSGSKKFWNNVLPHYLEL 1151
Score = 30.4 bits (67), Expect = 4.4
Identities = 37/158 (23%), Positives = 58/158 (36%), Gaps = 7/158 (4%)
Query: 291 RREDTLDVEVSASGYTKEMQADDELLHPLGPDDKNIETKEGSEFSFSDGEVAEKAEVYGS 350
++E+ E + + ++E G + + EG E GE E+ E
Sbjct: 776 KKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEG 835
Query: 351 ENESERNCLEESEGCYCRSSGDPEQIKEDSLSEESADARSFEMTEFNQALEEIKGQVVEN 410
E E EE EG G E+ E+ EE + E E EE +G+ E
Sbjct: 836 EEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEE-----EEGEGE-GEE 889
Query: 411 NSVTEFSEEKNRTENYNRQDGQ-RVQGGVPAGSDEYED 447
E EE+ E +G+ + G G +E E+
Sbjct: 890 EGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEE 927
>gi|207029299 NIMA-related kinase 10 isoform 3 [Homo sapiens]
Length = 712
Score = 38.9 bits (89), Expect = 0.012
Identities = 42/163 (25%), Positives = 72/163 (44%), Gaps = 25/163 (15%)
Query: 99 NQMGVGKESDIYIVANEEGQQF-ALKLHRLGRTSFRNLKNKRDYHKHRHNVSWLYLSRLS 157
+ +G G +Y V GQ A+K L +F K+K+D N+ +S L+
Sbjct: 523 DHLGSGAFGCVYKVRKHSGQNLLAMKEVNLHNPAFG--KDKKDRDSSVRNI----VSELT 576
Query: 158 AMKEFAYMKAL--YERKFPVPKPIDYNRHAVVMELINGYPLCQI-------HHVEDPASV 208
+KE Y + Y + F ++ +R +VMELI G PL + HH +
Sbjct: 577 IIKEQLYHPNIVRYYKTF-----LENDRLYIVMELIEGAPLGEHFSSLKEKHHHFTEERL 631
Query: 209 YDEAMELIVKLA----NHGLIHGDFNEFNLILDESDHITMIDF 247
+ ++L + L ++H D N++L + D +T+ DF
Sbjct: 632 WKIFIQLCLALRYLHKEKRIVHRDLTPNNIMLGDKDKVTVTDF 674
>gi|224589071 BMS1-like, ribosome assembly protein [Homo sapiens]
Length = 1282
Score = 38.5 bits (88), Expect = 0.016
Identities = 40/184 (21%), Positives = 88/184 (47%), Gaps = 28/184 (15%)
Query: 279 YESELFPTFKDIRR----EDTLDVEVSASGYTKEMQADDELLHPLGPDDKNIE----TKE 330
++ E+ PT + ++ T+D ++++S T + +D + PLG +D + + KE
Sbjct: 362 FQDEVGPTHELVQSLISTHSTIDAKMASSRVT--LFSDSK---PLGSEDIDNQGLMMPKE 416
Query: 331 GSEFSFSDGEVAEKAEVYGSENESERNCLEESEGCYCRSSGDPEQIKEDSLSEESADARS 390
+ + G + KA ++G E+ES + EE + + + ++ S EE+ + +
Sbjct: 417 EKQMDLNTGRMRRKA-IFGDEDESGDSDDEEDD-----EMSEDDGLENGSSDEEAEEEEN 470
Query: 391 FEMTEFNQALEEIKGQVVENNSVTE-----FSEEKNRTENYNRQDGQRVQGGVPAGSDEY 445
EMT+ A++ IK + +E +E F++ + E + ++G+ + A
Sbjct: 471 AEMTDQYMAVKGIKRRKLELEEDSEMDLPAFADSDDDLERSSAEEGEAEE----ADESSE 526
Query: 446 EDEC 449
E++C
Sbjct: 527 EEDC 530
>gi|162287219 prune homolog 2 [Homo sapiens]
Length = 3088
Score = 35.8 bits (81), Expect = 0.10
Identities = 30/140 (21%), Positives = 55/140 (39%), Gaps = 9/140 (6%)
Query: 301 SASGYTKEMQADDELLHPLGPDDKNIETKEGSEFSFSDGEVAEKAEVYGSENESERNCLE 360
+ASG +++ Q+D EL ++ E E G+++ A + + E LE
Sbjct: 1351 NASGISEKGQSDQEL--------SSLVASEHQEICIKSGKISSLAVTFSPQTEEPEEVLE 1402
Query: 361 ESEGCYCRSSGDPEQ-IKEDSLSEESADARSFEMTEFNQALEEIKGQVVENNSVTEFSEE 419
EG Y S D + + D+L + + + E + V+ ++
Sbjct: 1403 YEEGSYNLDSRDVQTGMSADNLQPKDTHEKHLMSQRNSGETTETSDGMNFTKYVSVPEKD 1462
Query: 420 KNRTENYNRQDGQRVQGGVP 439
+TE N + + V GG P
Sbjct: 1463 LEKTEECNFLEPENVGGGPP 1482
>gi|55741661 hypothetical protein LOC57653 [Homo sapiens]
Length = 1646
Score = 35.8 bits (81), Expect = 0.10
Identities = 56/242 (23%), Positives = 88/242 (36%), Gaps = 39/242 (16%)
Query: 324 KNIETKEGS-------EFSFSDG-EVAEKAEVYGSENESERNCLEESEGCYCRSSGDPEQ 375
K + K+GS E S S G A E EN+ E E + P
Sbjct: 804 KKLRKKQGSKEDMTRSEESISSGTSTARSVEEVEEENDQEMESFITEE-VLGQQKKSPLH 862
Query: 376 IKEDSLSEESADARSFEMTEFNQAL------EEIKGQ------VVENNSVTEFSEEKNRT 423
K D E S E +L E +KGQ E + E EE+
Sbjct: 863 AKMDESKEGSIQGLEEMQVEREGSLNPSLNEENVKGQGEKKEESEEEDEKEEEEEEEKLE 922
Query: 424 ENYNRQDGQRVQGGVPAGSDE----------YEDECPHLIALSSLNREFRPFRDEENVGA 473
E ++ Q Q + G +E YED I+ + F P +E +
Sbjct: 923 EEKEEKEAQEEQESLSVGEEEDKEEGLEEIYYEDMESFTISSGNTYFVFVPLEEEHCRKS 982
Query: 474 MNQYRTRTLSITSSGSAVSCSTIPPELVKQKVKRQL-------TKQQKSAVRRRLQKGEA 526
+ + ++ TSS + TIP L+ + +K+QL + ++ +++ RL+K A
Sbjct: 983 HSTFSAMFINDTSSAKFIEQVTIPSRLILE-IKKQLFSEGGNFSPKEINSLCSRLEKEAA 1041
Query: 527 NI 528
I
Sbjct: 1042 RI 1043
>gi|15451902 mitogen-activated protein kinase kinase kinase kinase 3
[Homo sapiens]
Length = 894
Score = 35.4 bits (80), Expect = 0.14
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Query: 186 VVMELINGYPLCQIHHVEDPAS------VYDEAMELIVKLANHGLIHGDFNEFNLILDES 239
+ ME G L I+HV P S V E ++ + L + G +H D N++L ++
Sbjct: 88 ICMEFCGGGSLQDIYHVTGPLSELQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDN 147
Query: 240 DHITMIDF 247
H+ + DF
Sbjct: 148 GHVKLADF 155
>gi|148763345 cell division cycle 2-like 2 isoform 4 [Homo sapiens]
Length = 770
Score = 34.3 bits (77), Expect = 0.31
Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 12/134 (8%)
Query: 332 SEFSFSDGEVAEKAEVYGSENESERNCLEESEGCYCRSSGDPEQIKED------SLSEES 385
SE S E + GSE E E EE EG S + E+ +E+ S SEE+
Sbjct: 260 SERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEA 319
Query: 386 ADARSFEMTEFNQALEEIKGQVVENNSVTEFSEEKNRTENYNRQDGQRVQGGVPAGS--- 442
++ + E++E + + E + + EN+ + +R + + + V G P S
Sbjct: 320 SEQSAEEVSE--EEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSALT 377
Query: 443 -DEYEDECPHLIAL 455
+Y + P L+ +
Sbjct: 378 EGDYVPDSPALLPI 391
>gi|148763347 cell division cycle 2-like 2 isoform 1 [Homo sapiens]
Length = 780
Score = 34.3 bits (77), Expect = 0.31
Identities = 33/134 (24%), Positives = 58/134 (43%), Gaps = 12/134 (8%)
Query: 332 SEFSFSDGEVAEKAEVYGSENESERNCLEESEGCYCRSSGDPEQIKED------SLSEES 385
SE S E + GSE E E EE EG S + E+ +E+ S SEE+
Sbjct: 270 SERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEA 329
Query: 386 ADARSFEMTEFNQALEEIKGQVVENNSVTEFSEEKNRTENYNRQDGQRVQGGVPAGS--- 442
++ + E++E + + E + + EN+ + +R + + + V G P S
Sbjct: 330 SEQSAEEVSE--EEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSALT 387
Query: 443 -DEYEDECPHLIAL 455
+Y + P L+ +
Sbjct: 388 EGDYVPDSPALLPI 401
>gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform
9 [Homo sapiens]
Length = 771
Score = 34.3 bits (77), Expect = 0.31
Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 9/134 (6%)
Query: 332 SEFSFSDGEVAEKAEVYGSENESERNCLEESEGCYCRSSGDPEQIKED------SLSEES 385
SE S E + GSE E E EE EG S + E+ +E+ S SEE+
Sbjct: 261 SERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEA 320
Query: 386 ADARSFEMTEFNQALEEIKGQVVENNSVTEFSEEKNRTENYNRQDGQRVQGGVPAGSDEY 445
++ + E++E + + E + + EN+ + +R + + + V G P S
Sbjct: 321 SEQSAEEVSE--EEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSALT 378
Query: 446 E-DECPHLIALSSL 458
E D P ALS +
Sbjct: 379 EGDYVPDSPALSPI 392
>gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isoform
8 [Homo sapiens]
Length = 780
Score = 34.3 bits (77), Expect = 0.31
Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 9/134 (6%)
Query: 332 SEFSFSDGEVAEKAEVYGSENESERNCLEESEGCYCRSSGDPEQIKED------SLSEES 385
SE S E + GSE E E EE EG S + E+ +E+ S SEE+
Sbjct: 270 SERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEA 329
Query: 386 ADARSFEMTEFNQALEEIKGQVVENNSVTEFSEEKNRTENYNRQDGQRVQGGVPAGSDEY 445
++ + E++E + + E + + EN+ + +R + + + V G P S
Sbjct: 330 SEQSAEEVSE--EEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSALT 387
Query: 446 E-DECPHLIALSSL 458
E D P ALS +
Sbjct: 388 EGDYVPDSPALSPI 401
>gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isoform
5 [Homo sapiens]
Length = 748
Score = 34.3 bits (77), Expect = 0.31
Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 9/134 (6%)
Query: 332 SEFSFSDGEVAEKAEVYGSENESERNCLEESEGCYCRSSGDPEQIKED------SLSEES 385
SE S E + GSE E E EE EG S + E+ +E+ S SEE+
Sbjct: 238 SERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEA 297
Query: 386 ADARSFEMTEFNQALEEIKGQVVENNSVTEFSEEKNRTENYNRQDGQRVQGGVPAGSDEY 445
++ + E++E + + E + + EN+ + +R + + + V G P S
Sbjct: 298 SEQSAEEVSE--EEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSALT 355
Query: 446 E-DECPHLIALSSL 458
E D P ALS +
Sbjct: 356 EGDYVPDSPALSPI 369
>gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isoform
4 [Homo sapiens]
Length = 737
Score = 34.3 bits (77), Expect = 0.31
Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 9/134 (6%)
Query: 332 SEFSFSDGEVAEKAEVYGSENESERNCLEESEGCYCRSSGDPEQIKED------SLSEES 385
SE S E + GSE E E EE EG S + E+ +E+ S SEE+
Sbjct: 227 SERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEA 286
Query: 386 ADARSFEMTEFNQALEEIKGQVVENNSVTEFSEEKNRTENYNRQDGQRVQGGVPAGSDEY 445
++ + E++E + + E + + EN+ + +R + + + V G P S
Sbjct: 287 SEQSAEEVSE--EEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSALT 344
Query: 446 E-DECPHLIALSSL 458
E D P ALS +
Sbjct: 345 EGDYVPDSPALSPI 358
>gi|16332360 cell division cycle 2-like 1 (PITSLRE proteins) isoform
3 [Homo sapiens]
Length = 526
Score = 34.3 bits (77), Expect = 0.31
Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 9/134 (6%)
Query: 332 SEFSFSDGEVAEKAEVYGSENESERNCLEESEGCYCRSSGDPEQIKED------SLSEES 385
SE S E + GSE E E EE EG S + E+ +E+ S SEE+
Sbjct: 16 SERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEA 75
Query: 386 ADARSFEMTEFNQALEEIKGQVVENNSVTEFSEEKNRTENYNRQDGQRVQGGVPAGSDEY 445
++ + E++E + + E + + EN+ + +R + + + V G P S
Sbjct: 76 SEQSAEEVSE--EEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSALT 133
Query: 446 E-DECPHLIALSSL 458
E D P ALS +
Sbjct: 134 EGDYVPDSPALSPI 147
>gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isoform
2 [Homo sapiens]
Length = 782
Score = 34.3 bits (77), Expect = 0.31
Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 9/134 (6%)
Query: 332 SEFSFSDGEVAEKAEVYGSENESERNCLEESEGCYCRSSGDPEQIKED------SLSEES 385
SE S E + GSE E E EE EG S + E+ +E+ S SEE+
Sbjct: 272 SERKTSSAESSSAESGSGSEEEEEEEEEEEEEGSTSEESEEEEEEEEEEEEETGSNSEEA 331
Query: 386 ADARSFEMTEFNQALEEIKGQVVENNSVTEFSEEKNRTENYNRQDGQRVQGGVPAGSDEY 445
++ + E++E + + E + + EN+ + +R + + + V G P S
Sbjct: 332 SEQSAEEVSE--EEMSEDEERENENHLLVVPESRFDRDSGESEEAEEEVGEGTPQSSALT 389
Query: 446 E-DECPHLIALSSL 458
E D P ALS +
Sbjct: 390 EGDYVPDSPALSPI 403
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 34.3 bits (77), Expect = 0.31
Identities = 50/230 (21%), Positives = 93/230 (40%), Gaps = 25/230 (10%)
Query: 325 NIET-KEGSEFSFSDGEVAEKAEVYGSENESERNCLEESEGCYCRSSGDPEQIKEDSLSE 383
NIE+ E + SF VA+K + E E ++ E+++ + + E K+D S+
Sbjct: 211 NIESGNEDDDASFKIKTVAQK-KAEKKERERKKRDEEKAKLRKLKEKEELETGKKDQ-SK 268
Query: 384 ESADARSFEMTEFNQALEEIKGQVVENNSVTEFSEEKNRT--------ENYNRQDGQRVQ 435
+ R FE E +K +V + V SEEK T E ++ ++ +
Sbjct: 269 QKESQRKFEE-------ETVKSKVTVDTGVIPASEEKAETPTAAEDDNEGDKKKKDKKKK 321
Query: 436 GGVPAGSDEYEDECPHLIALSSLNREFRPFRDEENVGAMNQYRTRTLSITSSGSAVSCST 495
G ++ + + P + ++ ++EE Q R I +
Sbjct: 322 KGEKEEKEKEKKKGPSKATVKAMQEALAKLKEEEE----RQKREEEERIKRLEELEAKRK 377
Query: 496 IPPELVKQKVKRQLTKQQKSAVRRRLQKGEANIFTKQRRENMQNIKSSLE 545
L ++K +R K+QK R+ K E + TK +RE +++L+
Sbjct: 378 EEERLEQEKRER---KKQKEKERKERLKKEGKLLTKSQREARARAEATLK 424
Score = 29.3 bits (64), Expect = 9.8
Identities = 20/91 (21%), Positives = 41/91 (45%)
Query: 321 PDDKNIETKEGSEFSFSDGEVAEKAEVYGSENESERNCLEESEGCYCRSSGDPEQIKEDS 380
P+++ E +E E S+ E E+ E GSE + E + + + P +
Sbjct: 531 PEEEEEEEEEEEEDEESEEEEEEEGESEGSEGDEEDEKVSDEKDSGKTLDKKPSKEMSSD 590
Query: 381 LSEESADARSFEMTEFNQALEEIKGQVVENN 411
+S D R+ E +++A I+ + +E++
Sbjct: 591 SEYDSDDDRTKEERAYDKAKRRIEKRRLEHS 621
>gi|4504487 histidine rich calcium binding protein precursor [Homo
sapiens]
Length = 699
Score = 33.9 bits (76), Expect = 0.40
Identities = 32/130 (24%), Positives = 47/130 (36%), Gaps = 2/130 (1%)
Query: 322 DDKNIETKEGS-EFSFSDGEVAEKAEVYGSENESERNCLEESEGCYCRSSGDPEQIKEDS 380
++K E GS E E EK +GS ++ + EE G + E+ KE+
Sbjct: 484 EEKEKEEDPGSHEEDDESSEQGEKGTHHGSRDQEDEEDEEEGHGLSLNQEEEEEEDKEEE 543
Query: 381 LSEESADARSFEMTEFNQALEEIKGQVVENNSVTEFSEEKNRTENYNRQDGQRVQGGVPA 440
EE + R E E L + E +E T N D + GG +
Sbjct: 544 EEEEDEERRE-ERAEVGAPLSPDHSEEEEEEEEGLEEDEPRFTIIPNPLDRREEAGGASS 602
Query: 441 GSDEYEDECP 450
+ ED P
Sbjct: 603 EEESGEDTGP 612
>gi|47157322 protein kinase C, beta isoform 1 [Homo sapiens]
Length = 671
Score = 33.5 bits (75), Expect = 0.52
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 187 VMELING----YPLCQIHHVEDPASVYDEAMELIVKL---ANHGLIHGDFNEFNLILDES 239
VME +NG Y + Q+ ++P +V+ A E+ + L + G+I+ D N++LD
Sbjct: 419 VMEYVNGGDLMYHIQQVGRFKEPHAVF-YAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSE 477
Query: 240 DHITMIDF 247
HI + DF
Sbjct: 478 GHIKIADF 485
>gi|20127450 protein kinase C, beta isoform 2 [Homo sapiens]
Length = 673
Score = 33.5 bits (75), Expect = 0.52
Identities = 22/68 (32%), Positives = 37/68 (54%), Gaps = 8/68 (11%)
Query: 187 VMELING----YPLCQIHHVEDPASVYDEAMELIVKL---ANHGLIHGDFNEFNLILDES 239
VME +NG Y + Q+ ++P +V+ A E+ + L + G+I+ D N++LD
Sbjct: 419 VMEYVNGGDLMYHIQQVGRFKEPHAVF-YAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSE 477
Query: 240 DHITMIDF 247
HI + DF
Sbjct: 478 GHIKIADF 485
>gi|118421089 chromodomain helicase DNA binding protein 2 isoform 1
[Homo sapiens]
Length = 1828
Score = 33.5 bits (75), Expect = 0.52
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 11/137 (8%)
Query: 380 SLSEESADARSFEMTEFNQALEEIKGQVVENNSVTEFSEEKNRTENYNRQDGQRVQGGVP 439
S SEE++ + S +E Q + G E+NS +E SE ++ +E + G + Q +P
Sbjct: 23 SASEEASGSDSGSQSESEQGSDPGSGHGSESNSSSESSESQSESE--SESAGSKSQPVLP 80
Query: 440 AGSDEYEDECPHLIALSSLNREFRPFRDEENVGAMNQYRTR--TLSITSSGSAVSCSTIP 497
++ + ++ + + + + D V N+ R +I S+ S S P
Sbjct: 81 EAKEKPASKKER---IADVKKMWEEYPDVYGVRRSNRSRQEPSRFNIKEEASSGSESGSP 137
Query: 498 PELVKQKVKRQLTKQQK 514
K++ +RQL KQ+K
Sbjct: 138 ----KRRGQRQLKKQEK 150
>gi|110611184 chromodomain helicase DNA binding protein 2 isoform 2
[Homo sapiens]
Length = 501
Score = 33.5 bits (75), Expect = 0.52
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 11/137 (8%)
Query: 380 SLSEESADARSFEMTEFNQALEEIKGQVVENNSVTEFSEEKNRTENYNRQDGQRVQGGVP 439
S SEE++ + S +E Q + G E+NS +E SE ++ +E + G + Q +P
Sbjct: 23 SASEEASGSDSGSQSESEQGSDPGSGHGSESNSSSESSESQSESE--SESAGSKSQPVLP 80
Query: 440 AGSDEYEDECPHLIALSSLNREFRPFRDEENVGAMNQYRTR--TLSITSSGSAVSCSTIP 497
++ + ++ + + + + D V N+ R +I S+ S S P
Sbjct: 81 EAKEKPASKKER---IADVKKMWEEYPDVYGVRRSNRSRQEPSRFNIKEEASSGSESGSP 137
Query: 498 PELVKQKVKRQLTKQQK 514
K++ +RQL KQ+K
Sbjct: 138 ----KRRGQRQLKKQEK 150
>gi|16117781 F-box and WD repeat domain containing 7 isoform 1 [Homo
sapiens]
Length = 707
Score = 33.1 bits (74), Expect = 0.68
Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 13/130 (10%)
Query: 301 SASGYTKEMQADDELLHPLGPDDKNIETKEGSE-FSFSDGEVAEKAEVYGSENESERNCL 359
S G Q D+E ++ + +++ + ++ E + +GEV G +N+S++ L
Sbjct: 18 SLRGNPSSSQVDEEQMNRVVEEEQQQQLRQQEEEHTARNGEVVGVEPRPGGQNDSQQGQL 77
Query: 360 EESEGCYCR----SSGDPEQIKEDSLSEESADARSFEMTEFNQALEEI--------KGQV 407
EE+ + SSG+ E+ +ED D E E +Q ++ + +
Sbjct: 78 EENNNRFISVDEDSSGNQEEQEEDEEHAGEQDEEDEEEEEMDQESDDFDQSDDSSREDEH 137
Query: 408 VENNSVTEFS 417
NSVT S
Sbjct: 138 THTNSVTNSS 147
>gi|4506067 protein kinase C, alpha [Homo sapiens]
Length = 672
Score = 32.7 bits (73), Expect = 0.89
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 8/68 (11%)
Query: 187 VMELING----YPLCQIHHVEDPASVYDEAMELIVKLA---NHGLIHGDFNEFNLILDES 239
VME +NG Y + Q+ ++P +V+ A E+ + L G+I+ D N++LD
Sbjct: 416 VMEYVNGGDLMYHIQQVGKFKEPQAVF-YAAEISIGLFFLHKRGIIYRDLKLDNVMLDSE 474
Query: 240 DHITMIDF 247
HI + DF
Sbjct: 475 GHIKIADF 482
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.131 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,762,888
Number of Sequences: 37866
Number of extensions: 860175
Number of successful extensions: 3380
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 117
Number of HSP's that attempted gapping in prelim test: 3197
Number of HSP's gapped (non-prelim): 253
length of query: 552
length of database: 18,247,518
effective HSP length: 107
effective length of query: 445
effective length of database: 14,195,856
effective search space: 6317155920
effective search space used: 6317155920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.