Guide to the Human Genome
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Name: RIOK2 Sequence: fasta or formatted (552aa) NCBI GI: 229331967
Description:

RIO kinase 2 isoform 1

Referenced in:

Additional Serine / Threonine Protein Kinases

Other entries for this name:
alt prot [474aa] RIO kinase 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         32           2
 C cysteine            1.4          8           1
 D aspartate           5.4         30           2
 E glutamate          10.7         59           2
 F phenylalanine       4.2         23           2
 G glycine             5.6         31           2
 H histidine           2.9         16           2
 I isoleucine          4.3         24           1
 K lysine              6.9         38           1
 L leucine             7.6         42           2
 M methionine          2.9         16           1
 N asparagine          5.4         30           2
 P proline             3.1         17           2
 Q glutamine           4.0         22           2
 R arginine            6.5         36           3
 S serine              8.5         47           2
 T threonine           3.8         21           1
 V valine              6.5         36           2
 W tryptophan          0.7          4           1
 Y tyrosine            3.6         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RIO kinase 2 isoform 1 
RIOK2                 0.848   RIO kinase 2 isoform 2 
RIOK1                 0.033   RIO kinase 1 isoform 1 
RIOK3                 0.023   sudD suppressor of bimD6 homolog 
RIOK1                 0.021   RIO kinase 1 isoform 2 
NRK                   0.015   Nik related kinase 
HTATSF1               0.014   HIV-1 Tat specific factor 1 
HTATSF1               0.014   HIV-1 Tat specific factor 1 
RPGR                  0.014   retinitis pigmentosa GTPase regulator isoform C [Hom...
NEK10                 0.013   NIMA-related kinase 10 isoform 3 
BMS1                  0.013   BMS1-like, ribosome assembly protein 
PRUNE2                0.010   prune homolog 2 
KIAA1529              0.010   hypothetical protein LOC57653 
MAP4K3                0.009   mitogen-activated protein kinase kinase kinase kinas...
CDC2L2                0.008   cell division cycle 2-like 2 isoform 4 
CDC2L2                0.008   cell division cycle 2-like 2 isoform 1 
CDC2L1                0.008   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.008   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.008   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.008   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.008   cell division cycle 2-like 1 (PITSLRE proteins) isof...
CDC2L1                0.008   cell division cycle 2-like 1 (PITSLRE proteins) isof...
EIF5B                 0.008   eukaryotic translation initiation factor 5B 
HRC                   0.008   histidine rich calcium binding protein precursor [Hom...
PRKCB                 0.007   protein kinase C, beta isoform 1 
PRKCB                 0.007   protein kinase C, beta isoform 2 
CHD2                  0.007   chromodomain helicase DNA binding protein 2 isoform...
CHD2                  0.007   chromodomain helicase DNA binding protein 2 isoform...
FBXW7                 0.007   F-box and WD repeat domain containing 7 isoform 1 [H...
PRKCA                 0.007   protein kinase C, alpha 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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