Guide to the Human Genome
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Name: RIOK3 Sequence: fasta or formatted (519aa) NCBI GI: 22325377
Description:

sudD suppressor of bimD6 homolog

Referenced in:

Additional Serine / Threonine Protein Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         38           3
 C cysteine            1.5          8           1
 D aspartate           6.9         36           2
 E glutamate           9.8         51           3
 F phenylalanine       4.2         22           2
 G glycine             5.2         27           2
 H histidine           3.3         17           1
 I isoleucine          4.0         21           2
 K lysine              8.7         45           2
 L leucine             7.9         41           2
 M methionine          3.7         19           1
 N asparagine          4.0         21           1
 P proline             4.8         25           2
 Q glutamine           3.3         17           1
 R arginine            4.6         24           2
 S serine              6.2         32           2
 T threonine           4.2         22           2
 V valine              6.4         33           2
 W tryptophan          1.2          6           1
 Y tyrosine            2.7         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   sudD suppressor of bimD6 homolog 
RIOK1                 0.241   RIO kinase 1 isoform 1 
RIOK1                 0.146   RIO kinase 1 isoform 2 
RIOK2                 0.024   RIO kinase 2 isoform 1 
RIOK2                 0.024   RIO kinase 2 isoform 2 
XPNPEP1               0.012   X-prolyl aminopeptidase (aminopeptidase P) 1, solubl...
KIAA0586              0.007   talpid3 protein 
L1TD1                 0.007   LINE-1 type transposase domain containing 1 
PYHIN1                0.006   pyrin and HIN domain family, member 1 beta 2 isoform...
PYHIN1                0.006   pyrin and HIN domain family, member 1 alpha 2 isofor...
SDCCAG10              0.006   serologically defined colon cancer antigen 10 
ZDBF2                 0.006   zinc finger, DBF-type containing 2 
ANKZF1                0.006   ankyrin repeat and zinc finger domain containing 1 ...
ANKZF1                0.006   ankyrin repeat and zinc finger domain containing 1 ...
FBXL5                 0.006   F-box and leucine-rich repeat protein 5 isoform 2 [H...
FBXL5                 0.006   F-box and leucine-rich repeat protein 5 isoform 1 [H...
DNAH9                 0.005   dynein, axonemal, heavy chain 9 isoform 2 
LOC100292358          0.005   PREDICTED: hypothetical protein 
LOC100290030          0.005   PREDICTED: hypothetical protein XP_002346594 
LOC100288429          0.005   PREDICTED: hypothetical protein XP_002342435 
NKAPL                 0.005   NFKB activating protein-like 
POLD3                 0.005   DNA-directed DNA polymerase delta 3 
BAHD1                 0.005   bromo adjacent homology domain containing 1 
LOC643677             0.004   hypothetical protein LOC643677 
LOC643677             0.004   PREDICTED: hypothetical protein LOC643677 
LOC643677             0.004   PREDICTED: hypothetical protein LOC643677 
LOC643677             0.004   PREDICTED: hypothetical protein LOC643677 
KIAA1217              0.004   sickle tail isoform 3 
KIAA1217              0.004   sickle tail isoform 2 
KIAA1217              0.004   sickle tail isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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