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Search of human proteins with 229090471
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|229090471 Tctex1 domain containing 2 [Homo sapiens]
(142 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|229090471 Tctex1 domain containing 2 [Homo sapiens] 295 1e-80
gi|239735600 Tctex1 domain containing 1 [Homo sapiens] 75 1e-14
gi|61966721 Tctex1 domain containing 4 [Homo sapiens] 72 2e-13
gi|169160677 PREDICTED: similar to Tctex1 domain containing 4 [H... 61 3e-10
gi|28372535 t-complex-associated-testis-expressed 3 [Homo sapiens] 60 8e-10
gi|5730085 dynein, light chain, Tctex-type 1 [Homo sapiens] 56 9e-09
gi|239753813 PREDICTED: similar to dynein, light chain, Tctex-ty... 54 6e-08
gi|239748376 PREDICTED: hypothetical protein XP_002346645 [Homo ... 54 6e-08
gi|239742301 PREDICTED: hypothetical protein XP_002342481 [Homo ... 54 6e-08
gi|5730087 dynein, light chain, Tctex-type 3 [Homo sapiens] 45 2e-05
gi|19923142 karyopherin beta 1 [Homo sapiens] 33 0.079
gi|23308715 SRY (sex determining region Y)-box 5 isoform b [Homo... 31 0.39
gi|23308713 SRY (sex determining region Y)-box 5 isoform a [Homo... 31 0.39
gi|31377634 guanylate binding protein 4 [Homo sapiens] 30 0.52
gi|21536468 AXL receptor tyrosine kinase isoform 2 [Homo sapiens] 30 0.88
gi|21536466 AXL receptor tyrosine kinase isoform 1 [Homo sapiens] 30 0.88
gi|170763479 MMS19 nucleotide excision repair homolog [Homo sapi... 29 1.1
gi|154350244 hypothetical protein LOC79632 isoform 2 [Homo sapiens] 29 1.5
gi|154350226 hypothetical protein LOC79632 isoform 1 [Homo sapiens] 29 1.5
gi|33188445 microfilament and actin filament cross-linker protei... 27 4.4
gi|6005902 thrombospondin 3 precursor [Homo sapiens] 27 4.4
gi|239735496 v-myb myeloblastosis viral oncogene homolog isoform... 27 7.4
gi|239735494 v-myb myeloblastosis viral oncogene homolog isoform... 27 7.4
gi|239735492 v-myb myeloblastosis viral oncogene homolog isoform... 27 7.4
gi|239735490 v-myb myeloblastosis viral oncogene homolog isoform... 27 7.4
gi|239735488 v-myb myeloblastosis viral oncogene homolog isoform... 27 7.4
gi|46361980 v-myb myeloblastosis viral oncogene homolog isoform ... 27 7.4
gi|194328729 v-myb myeloblastosis viral oncogene homolog isoform... 27 7.4
gi|194328727 v-myb myeloblastosis viral oncogene homolog isoform... 27 7.4
gi|9966851 cysteinyl leukotriene receptor 2 [Homo sapiens] 27 7.4
>gi|229090471 Tctex1 domain containing 2 [Homo sapiens]
Length = 142
Score = 295 bits (754), Expect = 1e-80
Identities = 142/142 (100%), Positives = 142/142 (100%)
Query: 1 MATSIGVSFSVGDGVPEAEKNAGEPENTYILRPVFQQRFRPSVVKDCIHAVLKEELANAE 60
MATSIGVSFSVGDGVPEAEKNAGEPENTYILRPVFQQRFRPSVVKDCIHAVLKEELANAE
Sbjct: 1 MATSIGVSFSVGDGVPEAEKNAGEPENTYILRPVFQQRFRPSVVKDCIHAVLKEELANAE 60
Query: 61 YSPEEMPQLTKHLSENIKDKLKEMGFDRYKMVVQVVIGEQRGEGVFMASRCFWDADTDNY 120
YSPEEMPQLTKHLSENIKDKLKEMGFDRYKMVVQVVIGEQRGEGVFMASRCFWDADTDNY
Sbjct: 61 YSPEEMPQLTKHLSENIKDKLKEMGFDRYKMVVQVVIGEQRGEGVFMASRCFWDADTDNY 120
Query: 121 THDVFMNDSLFCVVAAFGCFYY 142
THDVFMNDSLFCVVAAFGCFYY
Sbjct: 121 THDVFMNDSLFCVVAAFGCFYY 142
>gi|239735600 Tctex1 domain containing 1 [Homo sapiens]
Length = 179
Score = 75.5 bits (184), Expect = 1e-14
Identities = 41/115 (35%), Positives = 62/115 (53%), Gaps = 2/115 (1%)
Query: 26 ENTYILRPVFQQRFRPSVVKDCIHAVLKEELANAEYSPEEMPQLTKHLSENIKDKLKEMG 85
ENTY L P + F V + V+ L EY PE Q+TK +SE IK ++K++
Sbjct: 65 ENTYQLGP--PKHFPVVTVNHILKDVVTSYLQVEEYEPELCRQMTKTISEVIKAQVKDLM 122
Query: 86 FDRYKMVVQVVIGEQRGEGVFMASRCFWDADTDNYTHDVFMNDSLFCVVAAFGCF 140
RYK++V V IG+ + + + SRC WD +D ++ VF N SLF + + +
Sbjct: 123 IPRYKLIVIVHIGQLNRQSILIGSRCLWDPKSDTFSSYVFRNSSLFALANVYAVY 177
>gi|61966721 Tctex1 domain containing 4 [Homo sapiens]
Length = 221
Score = 71.6 bits (174), Expect = 2e-13
Identities = 45/134 (33%), Positives = 67/134 (50%), Gaps = 5/134 (3%)
Query: 7 VSFSVGDGVPEAEKNAGEPENTYILRPVFQQRFRPSVVKDCIHAVLKEELANAEYSPEEM 66
VSFS G+P A P +Y PV +R+ + + + A L L +A YS +E
Sbjct: 91 VSFS---GLPLAPARWVAP--SYRTEPVPGERWEAARAQRALEAALAAGLHDACYSSDEA 145
Query: 67 PQLTKHLSENIKDKLKEMGFDRYKMVVQVVIGEQRGEGVFMASRCFWDADTDNYTHDVFM 126
+L + L E + +L+E+ RYK+V VV+G + G+GV + SR WD D +
Sbjct: 146 ARLVRELCEQVHVRLRELSPPRYKLVCSVVLGPRAGQGVHVVSRALWDVARDGLASVSYT 205
Query: 127 NDSLFCVVAAFGCF 140
N SLF V G +
Sbjct: 206 NTSLFAVATVHGLY 219
>gi|169160677 PREDICTED: similar to Tctex1 domain containing 4 [Homo
sapiens]
Length = 127
Score = 61.2 bits (147), Expect = 3e-10
Identities = 29/80 (36%), Positives = 43/80 (53%)
Query: 61 YSPEEMPQLTKHLSENIKDKLKEMGFDRYKMVVQVVIGEQRGEGVFMASRCFWDADTDNY 120
YS +E +L + L E + +L+E+ RYK+V VV+G + G+GV + SR WD D
Sbjct: 46 YSSDEPARLVRELCEQVHVRLRELSPPRYKLVCSVVLGPRAGQGVHVVSRALWDVARDGL 105
Query: 121 THDVFMNDSLFCVVAAFGCF 140
+ N SLF V G +
Sbjct: 106 ASVSYTNTSLFAVATVHGLY 125
>gi|28372535 t-complex-associated-testis-expressed 3 [Homo sapiens]
Length = 198
Score = 59.7 bits (143), Expect = 8e-10
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Query: 27 NTYILRPVFQQRFRPSVVKDCIHAVLKEELANAEYSPEEMPQLTKHLSENIKDKLKEMGF 86
N+Y + P+ ++F+ V+ + +L E L + +Y + L+ L++ I +KE G+
Sbjct: 85 NSYRMEPL--KKFQAHSVETKVQQILTESLKDVKYDDKVFSHLSLELADRILLAVKEFGY 142
Query: 87 DRYKMVVQVVIGEQRGEGVFMASRCFWDADTDNYTHDVFMNDSLFCVVAAFGCFY 141
RYK +++V+ ++ G+ + +ASR WD D++ +S +V F +Y
Sbjct: 143 HRYKFIIKVLFIQKTGQAINIASRWIWDIAWDSWVAAKHEAESYVALVLVFALYY 197
>gi|5730085 dynein, light chain, Tctex-type 1 [Homo sapiens]
Length = 113
Score = 56.2 bits (134), Expect = 9e-09
Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 5/108 (4%)
Query: 35 FQQRFRPSVVKDCIHAVLKEELANA----EYSPEEMPQLTKHLSENIKDKLKEMGFDRYK 90
+Q + V D + ++KE + +A Y ++ Q T ++ E +L ++G +K
Sbjct: 4 YQAAEETAFVVDEVSNIVKEAIESAIGGNAYQHSKVNQWTTNVVEQTLSQLTKLG-KPFK 62
Query: 91 MVVQVVIGEQRGEGVFMASRCFWDADTDNYTHDVFMNDSLFCVVAAFG 138
+V VI ++ G G+ AS CFWD+ TD + N +++C+V+AFG
Sbjct: 63 YIVTCVIMQKNGAGLHTASSCFWDSSTDGSCTVRWENKTMYCIVSAFG 110
>gi|239753813 PREDICTED: similar to dynein, light chain, Tctex-type
1 [Homo sapiens]
Length = 116
Score = 53.5 bits (127), Expect = 6e-08
Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 42 SVVKDCIHAVLKE-ELANAEYSPEEMPQLTKHLSENIKDKLKEMGFDRYKMVVQVVIGEQ 100
+ VK+ I +V+ + Y ++ Q T ++ + + +L ++G +K +V VI ++
Sbjct: 18 NTVKEAIESVIGAGRVGGNAYQHSKVNQWTTNVEQTLS-QLPKLG-KPFKYIVTCVIIQK 75
Query: 101 RGEGVFMASRCFWDADTDNYTHDVFMNDSLFCVVAAFG 138
G G +MAS CFWD+ TD + N +++C+V AFG
Sbjct: 76 NGAGSYMASSCFWDSSTDGSYTVRWENKTMYCIVGAFG 113
>gi|239748376 PREDICTED: hypothetical protein XP_002346645 [Homo
sapiens]
Length = 116
Score = 53.5 bits (127), Expect = 6e-08
Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 42 SVVKDCIHAVLKE-ELANAEYSPEEMPQLTKHLSENIKDKLKEMGFDRYKMVVQVVIGEQ 100
+ VK+ I +V+ + Y ++ Q T ++ + + +L ++G +K +V VI ++
Sbjct: 18 NTVKEAIESVIGAGRVGGNAYQHSKVNQWTTNVEQTLS-QLPKLG-KPFKYIVTCVIIQK 75
Query: 101 RGEGVFMASRCFWDADTDNYTHDVFMNDSLFCVVAAFG 138
G G +MAS CFWD+ TD + N +++C+V AFG
Sbjct: 76 NGAGSYMASSCFWDSSTDGSYTVRWENKTMYCIVGAFG 113
>gi|239742301 PREDICTED: hypothetical protein XP_002342481 [Homo
sapiens]
Length = 116
Score = 53.5 bits (127), Expect = 6e-08
Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Query: 42 SVVKDCIHAVLKE-ELANAEYSPEEMPQLTKHLSENIKDKLKEMGFDRYKMVVQVVIGEQ 100
+ VK+ I +V+ + Y ++ Q T ++ + + +L ++G +K +V VI ++
Sbjct: 18 NTVKEAIESVIGAGRVGGNAYQHSKVNQWTTNVEQTLS-QLPKLG-KPFKYIVTCVIIQK 75
Query: 101 RGEGVFMASRCFWDADTDNYTHDVFMNDSLFCVVAAFG 138
G G +MAS CFWD+ TD + N +++C+V AFG
Sbjct: 76 NGAGSYMASSCFWDSSTDGSYTVRWENKTMYCIVGAFG 113
>gi|5730087 dynein, light chain, Tctex-type 3 [Homo sapiens]
Length = 116
Score = 45.1 bits (105), Expect = 2e-05
Identities = 27/96 (28%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 42 SVVKDCIHAVLKEELANAEYSPEEMPQLTKHLSENIKDKLKEMGFDRYKMVVQVVIGEQR 101
++VK+C+ VL E +Y+ + Q T + E L ++G YK +V + ++
Sbjct: 20 NIVKECVDGVLGGE----DYNHNNINQWTASIVEQSLTHLVKLG-KAYKYIVTCAVVQKS 74
Query: 102 GEGVFMASRCFWDADTDNYTHDVFMNDSLFCVVAAF 137
G AS CFWD +D + N ++ C+V F
Sbjct: 75 AYGFHTASSCFWDTTSDGTCTVRWENRTMNCIVNVF 110
>gi|19923142 karyopherin beta 1 [Homo sapiens]
Length = 876
Score = 33.1 bits (74), Expect = 0.079
Identities = 20/83 (24%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 19 EKNAGEPENTYILRPVFQQRFRPSVVKDCIHAVLKEELANAEYSPEEMPQLTKHLSE-NI 77
+ NA Y+L+ + + +RPS C+ + E+ ++ PE +PQL +++ N
Sbjct: 84 DANARREVKNYVLQTLGTETYRPSSASQCVAGIACAEIPVNQW-PELIPQLVANVTNPNS 142
Query: 78 KDKLKEMGFDRYKMVVQVVIGEQ 100
+ +KE + + Q + EQ
Sbjct: 143 TEHMKESTLEAIGYICQDIDPEQ 165
>gi|23308715 SRY (sex determining region Y)-box 5 isoform b [Homo
sapiens]
Length = 750
Score = 30.8 bits (68), Expect = 0.39
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 17 EAEKNAGEPENTYILRPVFQQRFRPSVVKDCIHAVLKEELANAEYSPEEMPQLTKHLSEN 76
E + +GE ++ L +++ + V D + EEL E PEE P + K LS++
Sbjct: 102 EGGRQSGESLSSTALGTPERRKGSLADVVDTLKQRKMEELIKNE--PEETPSIEKLLSKD 159
Query: 77 IKDKLKEMG 85
KDKL MG
Sbjct: 160 WKDKLLAMG 168
>gi|23308713 SRY (sex determining region Y)-box 5 isoform a [Homo
sapiens]
Length = 763
Score = 30.8 bits (68), Expect = 0.39
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 2/69 (2%)
Query: 17 EAEKNAGEPENTYILRPVFQQRFRPSVVKDCIHAVLKEELANAEYSPEEMPQLTKHLSEN 76
E + +GE ++ L +++ + V D + EEL E PEE P + K LS++
Sbjct: 115 EGGRQSGESLSSTALGTPERRKGSLADVVDTLKQRKMEELIKNE--PEETPSIEKLLSKD 172
Query: 77 IKDKLKEMG 85
KDKL MG
Sbjct: 173 WKDKLLAMG 181
>gi|31377634 guanylate binding protein 4 [Homo sapiens]
Length = 640
Score = 30.4 bits (67), Expect = 0.52
Identities = 15/43 (34%), Positives = 28/43 (65%)
Query: 35 FQQRFRPSVVKDCIHAVLKEELANAEYSPEEMPQLTKHLSENI 77
FQ++ ++ K VL+ E A+A+Y E+ +L++HL+E+I
Sbjct: 394 FQKKLVDTIEKKKGDFVLQNEEASAKYCQAELKRLSEHLTESI 436
>gi|21536468 AXL receptor tyrosine kinase isoform 2 [Homo sapiens]
Length = 885
Score = 29.6 bits (65), Expect = 0.88
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 4/36 (11%)
Query: 73 LSENIKDKLKEMGFDRYKMVVQVVIGEQRGEGVFMA 108
+SE +K+KL+++ DR+K V +G+ GEG F A
Sbjct: 509 ISEELKEKLRDVMVDRHK----VALGKTLGEGEFGA 540
>gi|21536466 AXL receptor tyrosine kinase isoform 1 [Homo sapiens]
Length = 894
Score = 29.6 bits (65), Expect = 0.88
Identities = 15/36 (41%), Positives = 24/36 (66%), Gaps = 4/36 (11%)
Query: 73 LSENIKDKLKEMGFDRYKMVVQVVIGEQRGEGVFMA 108
+SE +K+KL+++ DR+K V +G+ GEG F A
Sbjct: 518 ISEELKEKLRDVMVDRHK----VALGKTLGEGEFGA 549
>gi|170763479 MMS19 nucleotide excision repair homolog [Homo
sapiens]
Length = 1030
Score = 29.3 bits (64), Expect = 1.1
Identities = 22/86 (25%), Positives = 42/86 (48%), Gaps = 9/86 (10%)
Query: 60 EYSPEEMPQLTKHLSENI--------KDKLKEMGFDRYKMVVQVVIGEQRGEGVFMASRC 111
E + +PQ+ +H NI +++LK +G D +QV+ GE+ + +A R
Sbjct: 137 EVHVQSLPQVDRHTVYNIITNFMRTREEELKSLGADFTFGFIQVMDGEKDPRNLLVAFRI 196
Query: 112 FWDADTDNYTHDVFMNDSLFCVVAAF 137
D + +Y+ F+ + LF V + +
Sbjct: 197 VHDLISRDYSLGPFV-EELFEVTSCY 221
>gi|154350244 hypothetical protein LOC79632 isoform 2 [Homo sapiens]
Length = 971
Score = 28.9 bits (63), Expect = 1.5
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 52 LKEELANAEYSPEEMPQLTKHLSENIKDKLKEMGF 86
L+EEL + E+ E+ + +HL ENI KE+ F
Sbjct: 752 LQEELRHREHHISELDKEVQHLHENISALTKELEF 786
>gi|154350226 hypothetical protein LOC79632 isoform 1 [Homo sapiens]
Length = 1140
Score = 28.9 bits (63), Expect = 1.5
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 52 LKEELANAEYSPEEMPQLTKHLSENIKDKLKEMGF 86
L+EEL + E+ E+ + +HL ENI KE+ F
Sbjct: 872 LQEELRHREHHISELDKEVQHLHENISALTKELEF 906
>gi|33188445 microfilament and actin filament cross-linker protein
isoform a [Homo sapiens]
Length = 5430
Score = 27.3 bits (59), Expect = 4.4
Identities = 16/64 (25%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 45 KDCIHAVLKEELANAEYSPEEMPQLTKHLS---ENIKDKLKEMGFDRYKMVVQVVIGEQR 101
K+ + +VL EE+A A+ E+M +LT + E ++K ++ ++++ Q+ I +
Sbjct: 1210 KNSVFSVLDEEIAKAKVVAEQMSRLTPERNLDLERYQEKGSQLQERWHRVIAQLEIRQSE 1269
Query: 102 GEGV 105
E +
Sbjct: 1270 LESI 1273
>gi|6005902 thrombospondin 3 precursor [Homo sapiens]
Length = 956
Score = 27.3 bits (59), Expect = 4.4
Identities = 18/75 (24%), Positives = 32/75 (42%)
Query: 42 SVVKDCIHAVLKEELANAEYSPEEMPQLTKHLSENIKDKLKEMGFDRYKMVVQVVIGEQR 101
S V + +H++L E+ Q+ L ++I+D++KEM R ++ V G
Sbjct: 214 SAVTNALHSILGEQTKALVTQLTLFNQILVELRDDIRDQVKEMSLIRNTIMECQVCGFHE 273
Query: 102 GEGVFMASRCFWDAD 116
+ CF D
Sbjct: 274 QRSHCSPNPCFRGVD 288
>gi|239735496 v-myb myeloblastosis viral oncogene homolog isoform 8
[Homo sapiens]
Length = 605
Score = 26.6 bits (57), Expect = 7.4
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 24 EPENTYILRPVFQQRF---RPSVVKDCIHAVLKEELANAEYSPEEM-PQLTKHLSENIKD 79
+ ENT P ++ P HA+ +E+ +Y P +M PQ HL E+++D
Sbjct: 409 QKENTVFRTPAIKRSILESSPRTPTPFKHALAAQEI---KYGPLKMLPQTPSHLVEDLQD 465
Query: 80 KLKE 83
+K+
Sbjct: 466 VIKQ 469
>gi|239735494 v-myb myeloblastosis viral oncogene homolog isoform 7
[Homo sapiens]
Length = 603
Score = 26.6 bits (57), Expect = 7.4
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 24 EPENTYILRPVFQQRF---RPSVVKDCIHAVLKEELANAEYSPEEM-PQLTKHLSENIKD 79
+ ENT P ++ P HA+ +E+ +Y P +M PQ HL E+++D
Sbjct: 444 QKENTVFRTPAIKRSILESSPRTPTPFKHALAAQEI---KYGPLKMLPQTPSHLVEDLQD 500
Query: 80 KLKE 83
+K+
Sbjct: 501 VIKQ 504
>gi|239735492 v-myb myeloblastosis viral oncogene homolog isoform 6
[Homo sapiens]
Length = 745
Score = 26.6 bits (57), Expect = 7.4
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 24 EPENTYILRPVFQQRF---RPSVVKDCIHAVLKEELANAEYSPEEM-PQLTKHLSENIKD 79
+ ENT P ++ P HA+ +E+ +Y P +M PQ HL E+++D
Sbjct: 549 QKENTVFRTPAIKRSILESSPRTPTPFKHALAAQEI---KYGPLKMLPQTPSHLVEDLQD 605
Query: 80 KLKE 83
+K+
Sbjct: 606 VIKQ 609
>gi|239735490 v-myb myeloblastosis viral oncogene homolog isoform 5
[Homo sapiens]
Length = 555
Score = 26.6 bits (57), Expect = 7.4
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 24 EPENTYILRPVFQQRF---RPSVVKDCIHAVLKEELANAEYSPEEM-PQLTKHLSENIKD 79
+ ENT P ++ P HA+ +E+ +Y P +M PQ HL E+++D
Sbjct: 359 QKENTVFRTPAIKRSILESSPRTPTPFKHALAAQEI---KYGPLKMLPQTPSHLVEDLQD 415
Query: 80 KLKE 83
+K+
Sbjct: 416 VIKQ 419
>gi|239735488 v-myb myeloblastosis viral oncogene homolog isoform 4
[Homo sapiens]
Length = 758
Score = 26.6 bits (57), Expect = 7.4
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 24 EPENTYILRPVFQQRF---RPSVVKDCIHAVLKEELANAEYSPEEM-PQLTKHLSENIKD 79
+ ENT P ++ P HA+ +E+ +Y P +M PQ HL E+++D
Sbjct: 562 QKENTVFRTPAIKRSILESSPRTPTPFKHALAAQEI---KYGPLKMLPQTPSHLVEDLQD 618
Query: 80 KLKE 83
+K+
Sbjct: 619 VIKQ 622
>gi|46361980 v-myb myeloblastosis viral oncogene homolog isoform 2
[Homo sapiens]
Length = 640
Score = 26.6 bits (57), Expect = 7.4
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 24 EPENTYILRPVFQQRF---RPSVVKDCIHAVLKEELANAEYSPEEM-PQLTKHLSENIKD 79
+ ENT P ++ P HA+ +E+ +Y P +M PQ HL E+++D
Sbjct: 444 QKENTVFRTPAIKRSILESSPRTPTPFKHALAAQEI---KYGPLKMLPQTPSHLVEDLQD 500
Query: 80 KLKE 83
+K+
Sbjct: 501 VIKQ 504
>gi|194328729 v-myb myeloblastosis viral oncogene homolog isoform 1
[Homo sapiens]
Length = 761
Score = 26.6 bits (57), Expect = 7.4
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 24 EPENTYILRPVFQQRF---RPSVVKDCIHAVLKEELANAEYSPEEM-PQLTKHLSENIKD 79
+ ENT P ++ P HA+ +E+ +Y P +M PQ HL E+++D
Sbjct: 565 QKENTVFRTPAIKRSILESSPRTPTPFKHALAAQEI---KYGPLKMLPQTPSHLVEDLQD 621
Query: 80 KLKE 83
+K+
Sbjct: 622 VIKQ 625
>gi|194328727 v-myb myeloblastosis viral oncogene homolog isoform 3
[Homo sapiens]
Length = 637
Score = 26.6 bits (57), Expect = 7.4
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 7/64 (10%)
Query: 24 EPENTYILRPVFQQRF---RPSVVKDCIHAVLKEELANAEYSPEEM-PQLTKHLSENIKD 79
+ ENT P ++ P HA+ +E+ +Y P +M PQ HL E+++D
Sbjct: 441 QKENTVFRTPAIKRSILESSPRTPTPFKHALAAQEI---KYGPLKMLPQTPSHLVEDLQD 497
Query: 80 KLKE 83
+K+
Sbjct: 498 VIKQ 501
>gi|9966851 cysteinyl leukotriene receptor 2 [Homo sapiens]
Length = 346
Score = 26.6 bits (57), Expect = 7.4
Identities = 18/54 (33%), Positives = 25/54 (46%)
Query: 29 YILRPVFQQRFRPSVVKDCIHAVLKEELANAEYSPEEMPQLTKHLSENIKDKLK 82
+ LR V ++ + KD +H L LA A + P L EN KD+LK
Sbjct: 264 HTLRTVHLTTWKVGLCKDRLHKALVITLALAAANACFNPLLYYFAGENFKDRLK 317
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.136 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,381,923
Number of Sequences: 37866
Number of extensions: 230413
Number of successful extensions: 615
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 594
Number of HSP's gapped (non-prelim): 37
length of query: 142
length of database: 18,247,518
effective HSP length: 92
effective length of query: 50
effective length of database: 14,763,846
effective search space: 738192300
effective search space used: 738192300
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.