Guide to the Human Genome
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Name: DYNLT3 Sequence: fasta or formatted (116aa) NCBI GI: 5730087
Description:

dynein, light chain, Tctex-type 3

Referenced in:

Dynein and Dynactin

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8          9           1
 C cysteine            5.2          6           1
 D aspartate           4.3          5           1
 E glutamate           7.8          9           2
 F phenylalanine       3.4          4           1
 G glycine             6.0          7           2
 H histidine           5.2          6           1
 I isoleucine          6.0          7           1
 K lysine              4.3          5           1
 L leucine             4.3          5           1
 M methionine          1.7          2           1
 N asparagine          7.8          9           2
 P proline             0.0          0           0
 Q glutamine           2.6          3           1
 R arginine            2.6          3           1
 S serine              5.2          6           2
 T threonine           7.8          9           2
 V valine             11.2         13           2
 W tryptophan          2.6          3           1
 Y tyrosine            4.3          5           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   dynein, light chain, Tctex-type 3 
DYNLT1                0.545   dynein, light chain, Tctex-type 1 
LOC100292882          0.415   PREDICTED: similar to dynein, light chain, Tctex-ty...
LOC100290402          0.415   PREDICTED: hypothetical protein XP_002346645 
LOC100287951          0.415   PREDICTED: hypothetical protein XP_002342481 
TCTEX1D2              0.089   Tctex1 domain containing 2 
TCTEX1D1              0.062   Tctex1 domain containing 1 
TCTE3                 0.040   t-complex-associated-testis-expressed 3 
TCTEX1D4              0.040   Tctex1 domain containing 4 
LOC100134242          0.036   PREDICTED: similar to Tctex1 domain containing 4 [H...
LGR5                  0.018   leucine-rich repeat-containing G protein-coupled rece...
AASS                  0.009   aminoadipate-semialdehyde synthase 
SYNE2                 0.009   spectrin repeat containing, nuclear envelope 2 isof...
SYNE2                 0.009   spectrin repeat containing, nuclear envelope 2 isof...
FLT4                  0.004   fms-related tyrosine kinase 4 isoform 1 precursor [...
FLT4                  0.004   fms-related tyrosine kinase 4 isoform 2 precursor [...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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