Guide to the Human Genome
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Name: MYB Sequence: fasta or formatted (640aa) NCBI GI: 46361980
Description:

v-myb myeloblastosis viral oncogene homolog isoform 2

Referenced in:

Retroviral Oncogene Homologs
Hematopoiesis and Erythrocytes

Other entries for this name:
alt prot [637aa] v-myb myeloblastosis viral oncogene homolog isoform 3
alt prot [761aa] v-myb myeloblastosis viral oncogene homolog isoform 1
alt prot [758aa] v-myb myeloblastosis viral oncogene homolog isoform 4
alt prot [555aa] v-myb myeloblastosis viral oncogene homolog isoform 5
alt prot [745aa] v-myb myeloblastosis viral oncogene homolog isoform 6
alt prot [603aa] v-myb myeloblastosis viral oncogene homolog isoform 7
alt prot [605aa] v-myb myeloblastosis viral oncogene homolog isoform 8
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         41           4
 C cysteine            1.4          9           1
 D aspartate           5.0         32           2
 E glutamate           8.0         51           3
 F phenylalanine       2.3         15           2
 G glycine             4.1         26           1
 H histidine           4.4         28           2
 I isoleucine          4.1         26           2
 K lysine              6.9         44           2
 L leucine             8.1         52           3
 M methionine          1.9         12           1
 N asparagine          5.0         32           2
 P proline             7.3         47           2
 Q glutamine           5.6         36           2
 R arginine            4.7         30           2
 S serine              8.6         55           3
 T threonine           6.9         44           2
 V valine              5.3         34           1
 W tryptophan          1.9         12           1
 Y tyrosine            2.2         14           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   v-myb myeloblastosis viral oncogene homolog isoform ... 
MYB                   0.991   v-myb myeloblastosis viral oncogene homolog isoform...
MYB                   0.933   v-myb myeloblastosis viral oncogene homolog isoform...
MYB                   0.924   v-myb myeloblastosis viral oncogene homolog isoform...
MYB                   0.632   v-myb myeloblastosis viral oncogene homolog isoform...
MYB                   0.623   v-myb myeloblastosis viral oncogene homolog isoform...
MYB                   0.609   v-myb myeloblastosis viral oncogene homolog isoform...
MYB                   0.493   v-myb myeloblastosis viral oncogene homolog isoform...
MYBL1                 0.294   v-myb myeloblastosis viral oncogene homolog (avian)...
MYBL1                 0.294   v-myb myeloblastosis viral oncogene homolog (avian)...
MYBL2                 0.268   MYB-related protein B 
SNAPC4                0.058   small nuclear RNA activating complex, polypeptide 4,...
CDC5L                 0.037   CDC5-like 
DMTF1                 0.027   cyclin D binding myb-like transcription factor 1 is...
DMTF1                 0.027   cyclin D binding myb-like transcription factor 1 is...
DMTF1                 0.027   cyclin D binding myb-like transcription factor 1 is...
MYSM1                 0.012   Myb-like, SWIRM and MPN domains 1 
DNAJC2                0.012   DnaJ (Hsp40) homolog, subfamily C, member 2 isoform ...
DNAJC2                0.012   DnaJ (Hsp40) homolog, subfamily C, member 2 isoform...
LOC646359             0.009   PREDICTED: similar to telomeric repeat binding facto...
CCDC66                0.009   coiled-coil domain containing 66 isoform 1 
CCDC66                0.009   coiled-coil domain containing 66 isoform 2 
TERF1                 0.009   telomeric repeat binding factor 1 isoform 1 
TERF1                 0.009   telomeric repeat binding factor 1 isoform 2 
TERF2                 0.009   telomeric repeat binding factor 2 
LOC100134138          0.009   PREDICTED: similar to mucin, partial 
LOC646359             0.009   PREDICTED: similar to telomeric repeat binding fact...
TADA2L                0.008   transcriptional adaptor 2-like isoform a 
TADA2L                0.008   transcriptional adaptor 2-like isoform b 
KIAA1522              0.008   hypothetical protein LOC57648 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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