Search of human proteins with 22907034

Search of human proteins with 22907034

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|22907034 folliculin isoform 1 [Homo sapiens]
         (579 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|22907034 folliculin isoform 1 [Homo sapiens]                      1180   0.0  
gi|21389403 folliculin isoform 2 [Homo sapiens]                       604   e-173
gi|156139147 leucine rich repeat transmembrane neuronal 4 isofor...    37   0.038
gi|197927168 leucine rich repeat transmembrane neuronal 4 isofor...    37   0.038
gi|194578888 calmegin [Homo sapiens]                                   35   0.25 
gi|4758004 calmegin [Homo sapiens]                                     35   0.25 
gi|8923582 zinc finger protein 446 [Homo sapiens]                      34   0.32 
gi|21361639 DIPB protein [Homo sapiens]                                33   0.72 
gi|155029552 hypothetical protein LOC388115 [Homo sapiens]             33   0.72 
gi|239741309 PREDICTED: hypothetical protein XP_002344485 [Homo ...    33   0.94 
gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens]       32   1.2  
gi|169213924 PREDICTED: leucine rich repeat containing 68 [Homo ...    32   2.1  
gi|169214345 PREDICTED: leucine rich repeat containing 68 [Homo ...    32   2.1  
gi|169213302 PREDICTED: leucine rich repeat containing 68 [Homo ...    32   2.1  
gi|145699105 connexin40.1 [Homo sapiens]                               32   2.1  
gi|61743930 zinc finger and BTB domain containing 41 [Homo sapiens]    32   2.1  
gi|4502131 amyloid beta A4 precursor protein-binding, family B, ...    31   2.7  
gi|22035554 amyloid beta A4 precursor protein-binding, family B,...    31   2.7  
gi|218505694 potassium channel tetramerisation domain containing...    31   2.7  
gi|83415174 hypothetical protein LOC400818 [Homo sapiens]              31   2.7  
gi|224589132 hypothetical protein LOC100132406 [Homo sapiens]          31   3.6  
gi|239753701 PREDICTED: hypothetical protein [Homo sapiens]            31   3.6  
gi|239748275 PREDICTED: hypothetical protein XP_002346602 [Homo ...    31   3.6  
gi|239742176 PREDICTED: hypothetical protein XP_002342444 [Homo ...    31   3.6  
gi|31543392 peroxisome proliferator-activated receptor gamma, co...    31   3.6  
gi|105990539 neurofilament, light polypeptide 68kDa [Homo sapiens]     31   3.6  
gi|20143482 melanoma antigen family E, 1 [Homo sapiens]                31   3.6  
gi|111548650 family with sequence similarity 170, member A [Homo...    31   3.6  
gi|13994253 Golgi reassembly stacking protein 1 [Homo sapiens]         31   3.6  
gi|92110019 hypothetical protein LOC55672 [Homo sapiens]               31   3.6  

>gi|22907034 folliculin isoform 1 [Homo sapiens]
          Length = 579

 Score = 1180 bits (3052), Expect = 0.0
 Identities = 579/579 (100%), Positives = 579/579 (100%)

Query: 1   MNAIVALCHFCELHGPRTLFCTEVLHAPLPQGDGNEDSPGQGEQAEEEEGGIQMNSRMRA 60
           MNAIVALCHFCELHGPRTLFCTEVLHAPLPQGDGNEDSPGQGEQAEEEEGGIQMNSRMRA
Sbjct: 1   MNAIVALCHFCELHGPRTLFCTEVLHAPLPQGDGNEDSPGQGEQAEEEEGGIQMNSRMRA 60

Query: 61  HSPAEGASVESSSPGPKKSDMCEGCRSLAAGHPGYISHDKETSIKYVSHQHPSHPQLFSI 120
           HSPAEGASVESSSPGPKKSDMCEGCRSLAAGHPGYISHDKETSIKYVSHQHPSHPQLFSI
Sbjct: 61  HSPAEGASVESSSPGPKKSDMCEGCRSLAAGHPGYISHDKETSIKYVSHQHPSHPQLFSI 120

Query: 121 VRQACVRSLSCEVCPGREGPIFFGDEQHGFVFSHTFFIKDSLARGFQRWYSIITIMMDRI 180
           VRQACVRSLSCEVCPGREGPIFFGDEQHGFVFSHTFFIKDSLARGFQRWYSIITIMMDRI
Sbjct: 121 VRQACVRSLSCEVCPGREGPIFFGDEQHGFVFSHTFFIKDSLARGFQRWYSIITIMMDRI 180

Query: 181 YLINSWPFLLGKVRGIIDELQGKALKVFEAEQFGCPQRAQRMNTAFTPFLHQRNGNAARS 240
           YLINSWPFLLGKVRGIIDELQGKALKVFEAEQFGCPQRAQRMNTAFTPFLHQRNGNAARS
Sbjct: 181 YLINSWPFLLGKVRGIIDELQGKALKVFEAEQFGCPQRAQRMNTAFTPFLHQRNGNAARS 240

Query: 241 LTSLTSDDNLWACLHTSFAWLLKACGSRLTEKLLEGAPTEDTLVQMEKLADLEEESESWD 300
           LTSLTSDDNLWACLHTSFAWLLKACGSRLTEKLLEGAPTEDTLVQMEKLADLEEESESWD
Sbjct: 241 LTSLTSDDNLWACLHTSFAWLLKACGSRLTEKLLEGAPTEDTLVQMEKLADLEEESESWD 300

Query: 301 NSEAEEEEKAPVLPESTEGRELTQGPAESSSLSGCGSWQPRKLPVFKSLRHMRQVLGAPS 360
           NSEAEEEEKAPVLPESTEGRELTQGPAESSSLSGCGSWQPRKLPVFKSLRHMRQVLGAPS
Sbjct: 301 NSEAEEEEKAPVLPESTEGRELTQGPAESSSLSGCGSWQPRKLPVFKSLRHMRQVLGAPS 360

Query: 361 FRMLAWHVLMGNQVIWKSRDVDLVQSAFEVLRTMLPVGCVRIIPYSSQYEEAYRCNFLGL 420
           FRMLAWHVLMGNQVIWKSRDVDLVQSAFEVLRTMLPVGCVRIIPYSSQYEEAYRCNFLGL
Sbjct: 361 FRMLAWHVLMGNQVIWKSRDVDLVQSAFEVLRTMLPVGCVRIIPYSSQYEEAYRCNFLGL 420

Query: 421 SPHVQIPPHVLSSEFAVIVEVHAAARSTLHPVGCEDDQSLSKYEFVVTSGSPVAADRVGP 480
           SPHVQIPPHVLSSEFAVIVEVHAAARSTLHPVGCEDDQSLSKYEFVVTSGSPVAADRVGP
Sbjct: 421 SPHVQIPPHVLSSEFAVIVEVHAAARSTLHPVGCEDDQSLSKYEFVVTSGSPVAADRVGP 480

Query: 481 TILNKIEAALTNQNLSVDVVDQCLVCLKEEWMNKVKVLFKFTKVDSRPKEDTQKLLSILG 540
           TILNKIEAALTNQNLSVDVVDQCLVCLKEEWMNKVKVLFKFTKVDSRPKEDTQKLLSILG
Sbjct: 481 TILNKIEAALTNQNLSVDVVDQCLVCLKEEWMNKVKVLFKFTKVDSRPKEDTQKLLSILG 540

Query: 541 ASEEDNVKLLKFWMTGLSKTYKSHLMSTVRSPTASESRN 579
           ASEEDNVKLLKFWMTGLSKTYKSHLMSTVRSPTASESRN
Sbjct: 541 ASEEDNVKLLKFWMTGLSKTYKSHLMSTVRSPTASESRN 579


>gi|21389403 folliculin isoform 2 [Homo sapiens]
          Length = 342

 Score =  604 bits (1558), Expect = e-173
 Identities = 290/290 (100%), Positives = 290/290 (100%)

Query: 1   MNAIVALCHFCELHGPRTLFCTEVLHAPLPQGDGNEDSPGQGEQAEEEEGGIQMNSRMRA 60
           MNAIVALCHFCELHGPRTLFCTEVLHAPLPQGDGNEDSPGQGEQAEEEEGGIQMNSRMRA
Sbjct: 1   MNAIVALCHFCELHGPRTLFCTEVLHAPLPQGDGNEDSPGQGEQAEEEEGGIQMNSRMRA 60

Query: 61  HSPAEGASVESSSPGPKKSDMCEGCRSLAAGHPGYISHDKETSIKYVSHQHPSHPQLFSI 120
           HSPAEGASVESSSPGPKKSDMCEGCRSLAAGHPGYISHDKETSIKYVSHQHPSHPQLFSI
Sbjct: 61  HSPAEGASVESSSPGPKKSDMCEGCRSLAAGHPGYISHDKETSIKYVSHQHPSHPQLFSI 120

Query: 121 VRQACVRSLSCEVCPGREGPIFFGDEQHGFVFSHTFFIKDSLARGFQRWYSIITIMMDRI 180
           VRQACVRSLSCEVCPGREGPIFFGDEQHGFVFSHTFFIKDSLARGFQRWYSIITIMMDRI
Sbjct: 121 VRQACVRSLSCEVCPGREGPIFFGDEQHGFVFSHTFFIKDSLARGFQRWYSIITIMMDRI 180

Query: 181 YLINSWPFLLGKVRGIIDELQGKALKVFEAEQFGCPQRAQRMNTAFTPFLHQRNGNAARS 240
           YLINSWPFLLGKVRGIIDELQGKALKVFEAEQFGCPQRAQRMNTAFTPFLHQRNGNAARS
Sbjct: 181 YLINSWPFLLGKVRGIIDELQGKALKVFEAEQFGCPQRAQRMNTAFTPFLHQRNGNAARS 240

Query: 241 LTSLTSDDNLWACLHTSFAWLLKACGSRLTEKLLEGAPTEDTLVQMEKLA 290
           LTSLTSDDNLWACLHTSFAWLLKACGSRLTEKLLEGAPTEDTLVQMEKLA
Sbjct: 241 LTSLTSDDNLWACLHTSFAWLLKACGSRLTEKLLEGAPTEDTLVQMEKLA 290


>gi|156139147 leucine rich repeat transmembrane neuronal 4 isoform b
           [Homo sapiens]
          Length = 518

 Score = 37.4 bits (85), Expect = 0.038
 Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 9/125 (7%)

Query: 199 ELQGKALKVFEAEQFGCPQRAQRMNTAFTPF--LHQRNGNAARSLTSLTSDDNLWACLHT 256
           +L G  ++  E   F C    Q++N        + Q   NA  SL S+T   N+W C  +
Sbjct: 259 DLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETVNAWISLISITLSGNMWECSRS 318

Query: 257 ---SFAWLLKACGSRLTEKLLEGAPTEDTLVQMEKLADLEEESESWDNSEAEEEEKAPVL 313
               F WL    G++ +  +  G       +Q EK++D  E        +    E++ ++
Sbjct: 319 ICPLFYWLKNFKGNKESTMICAGPKH----IQGEKVSDAVETYNICSEVQVVNTERSHLV 374

Query: 314 PESTE 318
           P++ +
Sbjct: 375 PQTPQ 379


>gi|197927168 leucine rich repeat transmembrane neuronal 4 isoform a
           [Homo sapiens]
          Length = 590

 Score = 37.4 bits (85), Expect = 0.038
 Identities = 29/125 (23%), Positives = 53/125 (42%), Gaps = 9/125 (7%)

Query: 199 ELQGKALKVFEAEQFGCPQRAQRMNTAFTPF--LHQRNGNAARSLTSLTSDDNLWACLHT 256
           +L G  ++  E   F C    Q++N        + Q   NA  SL S+T   N+W C  +
Sbjct: 259 DLSGNDIQGIEPGTFKCLPNLQKLNLDSNKLTNISQETVNAWISLISITLSGNMWECSRS 318

Query: 257 ---SFAWLLKACGSRLTEKLLEGAPTEDTLVQMEKLADLEEESESWDNSEAEEEEKAPVL 313
               F WL    G++ +  +  G       +Q EK++D  E        +    E++ ++
Sbjct: 319 ICPLFYWLKNFKGNKESTMICAGPKH----IQGEKVSDAVETYNICSEVQVVNTERSHLV 374

Query: 314 PESTE 318
           P++ +
Sbjct: 375 PQTPQ 379


>gi|194578888 calmegin [Homo sapiens]
          Length = 610

 Score = 34.7 bits (78), Expect = 0.25
 Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%)

Query: 270 TEKLLEGAPTEDTLVQMEKLADLEEESESWDNSEAEEEEKAPVLPESTEGRELTQGPAES 329
           T+ +LE    E+    +EK  DLEEE +  D    E+EE++    +S E  E+ +G  ES
Sbjct: 515 TKGVLEQEEKEEKAA-LEKPMDLEEEKKQNDGEMLEKEEESEPEEKSEEEIEIIEGQEES 573

Query: 330 SSLSGCGS 337
           +  +  GS
Sbjct: 574 NQSNKSGS 581


>gi|4758004 calmegin [Homo sapiens]
          Length = 610

 Score = 34.7 bits (78), Expect = 0.25
 Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 1/68 (1%)

Query: 270 TEKLLEGAPTEDTLVQMEKLADLEEESESWDNSEAEEEEKAPVLPESTEGRELTQGPAES 329
           T+ +LE    E+    +EK  DLEEE +  D    E+EE++    +S E  E+ +G  ES
Sbjct: 515 TKGVLEQEEKEEKAA-LEKPMDLEEEKKQNDGEMLEKEEESEPEEKSEEEIEIIEGQEES 573

Query: 330 SSLSGCGS 337
           +  +  GS
Sbjct: 574 NQSNKSGS 581


>gi|8923582 zinc finger protein 446 [Homo sapiens]
          Length = 450

 Score = 34.3 bits (77), Expect = 0.32
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 30  PQGDGNEDSPGQGEQAEEEEGGIQMNSRMRAHSPAEGASVESSSP 74
           P   G  +SPG+G Q    EG +Q++  ++     +G  V  SSP
Sbjct: 138 PHPSGTVESPGEGPQDTRIEGSVQLSCSVKEEPNVDGQEVAPSSP 182


>gi|21361639 DIPB protein [Homo sapiens]
          Length = 344

 Score = 33.1 bits (74), Expect = 0.72
 Identities = 26/79 (32%), Positives = 37/79 (46%), Gaps = 12/79 (15%)

Query: 254 LHTSFAWLLKACGSRLTEKLLEGAPTEDTLVQMEKLADLE----EESESWDNSEAEEEEK 309
           +H S AW   A G        EGA  E+  V++E+  ++E    EESES + SE+EEE +
Sbjct: 61  VHGSQAWTPPADG--------EGAGKEEAEVKVEQEREIESEAGEESESEEESESEEESE 112

Query: 310 APVLPESTEGRELTQGPAE 328
                E     E  +   E
Sbjct: 113 TEEESEDESDEESEEDSEE 131


>gi|155029552 hypothetical protein LOC388115 [Homo sapiens]
          Length = 534

 Score = 33.1 bits (74), Expect = 0.72
 Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 10/96 (10%)

Query: 260 WLLKACGSRLTEKLLEGAPTED-----TLVQMEKLADLEEESESWDNSEAEEEEKAPVLP 314
           W    CG R+T ++LE    ED      L ++ +LA   E         +E+  +A    
Sbjct: 130 WARGTCGPRVTNEMLEDEDAEDHGGTFCLGELVELAVTMENKAEGKRIVSEKPTRARNQG 189

Query: 315 -ESTEGRELTQGP----AESSSLSGCGSWQPRKLPV 345
            E + G  +T+ P    A SS  +  GSW+P   PV
Sbjct: 190 IEGSPGGRVTRSPPTQVAISSDSARKGSWEPWSRPV 225


>gi|239741309 PREDICTED: hypothetical protein XP_002344485 [Homo
           sapiens]
          Length = 4621

 Score = 32.7 bits (73), Expect = 0.94
 Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 8/88 (9%)

Query: 263 KACGSRLTEKLLEGAPTEDTLVQMEKLADLEEESESWDNSEAEEEEK--APVLPESTEGR 320
           K+ G  L E+L EG      LVQ     + E+E E     EAE+ +K  AP   + TE  
Sbjct: 138 KSQGQDLQEQLAEGCRLAQHLVQKLSPENDEDEDEDVQVEEAEKVQKSSAPREVQKTEES 197

Query: 321 ELTQGPAE------SSSLSGCGSWQPRK 342
           ++ +   E      S+S   C S QP K
Sbjct: 198 KVPEDSLEECAITCSNSHGPCDSNQPHK 225


>gi|209977046 fibrous sheath CABYR binding protein [Homo sapiens]
          Length = 825

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 32/127 (25%), Positives = 52/127 (40%), Gaps = 13/127 (10%)

Query: 227 TPFLHQRNGNAARSLTSLTSD--DNLWACLHTSFAWLLKACGSRLTEKLLEGAPTEDTLV 284
           +P    R GN + S  S ++   +++         W  +  G  +T K L+     DT+V
Sbjct: 24  SPKATHRIGNTSGSKGSYSAKAYESIRVSSELQQTWTKRKHGQEMTSKSLQ----TDTIV 79

Query: 285 QMEKLADLEEESESWDNSEAEEEEKAPVLPESTEGRELTQG-PA------ESSSLSGCGS 337
           + +K   L EE+   +   A+  E A  LPES +  E+    P+       S   S  G 
Sbjct: 80  EEKKEVKLVEETVVPEEKSADVREAAIELPESVQDVEIPPNIPSVQLKMDRSQQTSRTGY 139

Query: 338 WQPRKLP 344
           W    +P
Sbjct: 140 WTMMNIP 146


>gi|169213924 PREDICTED: leucine rich repeat containing 68 [Homo
           sapiens]
          Length = 625

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 17/53 (32%), Positives = 23/53 (43%)

Query: 27  APLPQGDGNEDSPGQGEQAEEEEGGIQMNSRMRAHSPAEGASVESSSPGPKKS 79
           +P P  D + DS   GE+ EEEEG           +   G+S     P P +S
Sbjct: 511 SPAPSPDSDSDSDSDGEEEEEEEGERDETPSGAIDTRDTGSSEPQPPPEPPRS 563


>gi|169214345 PREDICTED: leucine rich repeat containing 68 [Homo
           sapiens]
          Length = 625

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 17/53 (32%), Positives = 23/53 (43%)

Query: 27  APLPQGDGNEDSPGQGEQAEEEEGGIQMNSRMRAHSPAEGASVESSSPGPKKS 79
           +P P  D + DS   GE+ EEEEG           +   G+S     P P +S
Sbjct: 511 SPAPSPDSDSDSDSDGEEEEEEEGERDETPSGAIDTRDTGSSEPQPPPEPPRS 563


>gi|169213302 PREDICTED: leucine rich repeat containing 68 [Homo
           sapiens]
          Length = 625

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 17/53 (32%), Positives = 23/53 (43%)

Query: 27  APLPQGDGNEDSPGQGEQAEEEEGGIQMNSRMRAHSPAEGASVESSSPGPKKS 79
           +P P  D + DS   GE+ EEEEG           +   G+S     P P +S
Sbjct: 511 SPAPSPDSDSDSDSDGEEEEEEEGERDETPSGAIDTRDTGSSEPQPPPEPPRS 563


>gi|145699105 connexin40.1 [Homo sapiens]
          Length = 370

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 26/87 (29%), Positives = 34/87 (39%), Gaps = 3/87 (3%)

Query: 250 LWACLHTSFAWLLK--ACGSRLTEKLLEGAPTEDTLVQMEKLADLEEESESWDNSEAEEE 307
           LWA    SF   L    C  R   +   G PT  + ++ +  A    E    D     EE
Sbjct: 201 LWAVSALSFLLGLADLVCSLRRRMRRRPGPPTSPS-IRKQSGASGHAEGRRTDEEGGREE 259

Query: 308 EKAPVLPESTEGRELTQGPAESSSLSG 334
           E AP  P +  G E    P  +S +SG
Sbjct: 260 EGAPAPPGARAGGEGAGSPRRTSRVSG 286


>gi|61743930 zinc finger and BTB domain containing 41 [Homo sapiens]
          Length = 909

 Score = 31.6 bits (70), Expect = 2.1
 Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 8/58 (13%)

Query: 77  KKSDMCEGCRSLAAGHPGYISHDKETSIKYVSHQHPSHPQLFSIVRQACVRSLSCEVC 134
           KK   C  C  L A         K+T  K+V   HP + Q F  +++    S  C++C
Sbjct: 419 KKEHKCPYCNKLHAS--------KKTLAKHVKRFHPENAQEFISIKKTKSESWKCDIC 468


>gi|4502131 amyloid beta A4 precursor protein-binding, family B,
           member 1 isoform E9 [Homo sapiens]
          Length = 710

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 23/53 (43%), Positives = 26/53 (49%), Gaps = 9/53 (16%)

Query: 287 EKLADLEEESESWDNSEAEEEEKA--PVLPESTEGRE-------LTQGPAESS 330
           EK A   EE E  D+ E EEE+ +  P LPE  E  E       LT GP E S
Sbjct: 151 EKAAGEAEEEEEDDDDEEEEEDLSSPPGLPEPLESVEAPPRPQALTDGPREHS 203


>gi|22035554 amyloid beta A4 precursor protein-binding, family B,
           member 1 isoform delta E9 [Homo sapiens]
          Length = 708

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 23/53 (43%), Positives = 26/53 (49%), Gaps = 9/53 (16%)

Query: 287 EKLADLEEESESWDNSEAEEEEKA--PVLPESTEGRE-------LTQGPAESS 330
           EK A   EE E  D+ E EEE+ +  P LPE  E  E       LT GP E S
Sbjct: 151 EKAAGEAEEEEEDDDDEEEEEDLSSPPGLPEPLESVEAPPRPQALTDGPREHS 203


>gi|218505694 potassium channel tetramerisation domain containing 1
           isoform b [Homo sapiens]
          Length = 865

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 10/75 (13%)

Query: 280 EDTLVQMEKLADLEEESESWDNSEAEEEEKA----------PVLPESTEGRELTQGPAES 329
           ED + +++   D EEE +     E +EEE+           P+ PE + G EL   P   
Sbjct: 63  EDEIQEVQITGDEEEEEDGGGGLEEDEEEEEEEEMGLDWDEPLEPEDSAGEELEPEPVHM 122

Query: 330 SSLSGCGSWQPRKLP 344
            ++    + +P   P
Sbjct: 123 INMDQSAALEPEAPP 137


>gi|83415174 hypothetical protein LOC400818 [Homo sapiens]
          Length = 942

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 3/73 (4%)

Query: 263 KACGSRLTEKLLEGAPTEDTLVQMEKLADLEEESESWDNSEAEEEEKAPVLPESTEGREL 322
           K+ G  L E+L EG      LVQ  KL+   +E E  ++ + EE+EK    P   E ++ 
Sbjct: 138 KSQGQDLQEQLAEGCRLAQHLVQ--KLSPENDEDED-EDVQVEEDEKVLESPAPREVQKA 194

Query: 323 TQGPAESSSLSGC 335
            +      SL  C
Sbjct: 195 EESKVTEDSLEEC 207


>gi|224589132 hypothetical protein LOC100132406 [Homo sapiens]
          Length = 3628

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 8/88 (9%)

Query: 263 KACGSRLTEKLLEGAPTEDTLVQMEKLADLEEESESWDNSEAEE--EEKAPVLPESTEGR 320
           K+ G  L E+L EG      LVQ     + E+E E     EAE+  E  AP   +  E  
Sbjct: 138 KSQGQDLQEQLAEGCRLAQHLVQKLSPENDEDEDEDVQVEEAEKVLESSAPREVQKAEES 197

Query: 321 ELTQGPAE------SSSLSGCGSWQPRK 342
           ++ +   E      S+S   C S QP K
Sbjct: 198 KVPEDSLEECAITCSNSHGPCDSNQPHK 225


>gi|239753701 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 176

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)

Query: 309 KAPVLPESTEGRELTQGPAESSSLSGCGSWQPRKLPVFKSLRHMRQVLGAP 359
           K  V P+S + ++L Q   E SS S    W P +LP+ +  R   QV  +P
Sbjct: 60  KGSVDPKSEQQQDLLQRVKEQSSHSV--EWDPSRLPLLRGARESEQVGASP 108


>gi|239748275 PREDICTED: hypothetical protein XP_002346602 [Homo
           sapiens]
          Length = 176

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)

Query: 309 KAPVLPESTEGRELTQGPAESSSLSGCGSWQPRKLPVFKSLRHMRQVLGAP 359
           K  V P+S + ++L Q   E SS S    W P +LP+ +  R   QV  +P
Sbjct: 60  KGSVDPKSEQQQDLLQRVKEQSSHSV--EWDPSRLPLLRGARESEQVGASP 108


>gi|239742176 PREDICTED: hypothetical protein XP_002342444 [Homo
           sapiens]
          Length = 176

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)

Query: 309 KAPVLPESTEGRELTQGPAESSSLSGCGSWQPRKLPVFKSLRHMRQVLGAP 359
           K  V P+S + ++L Q   E SS S    W P +LP+ +  R   QV  +P
Sbjct: 60  KGSVDPKSEQQQDLLQRVKEQSSHSV--EWDPSRLPLLRGARESEQVGASP 108


>gi|31543392 peroxisome proliferator-activated receptor gamma,
           coactivator 1 beta [Homo sapiens]
          Length = 1023

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 11/59 (18%)

Query: 293 EEESESWDNSEAEEEEKAPVLPESTE-----------GRELTQGPAESSSLSGCGSWQP 340
           EEE E  +  E +EEE + V P  ++            R+L      SS  S C SW P
Sbjct: 808 EEEEEGEEEEEDDEEEDSGVSPTCSDHCPYQSPPSKANRQLCSRSRSSSGSSPCHSWSP 866


>gi|105990539 neurofilament, light polypeptide 68kDa [Homo sapiens]
          Length = 543

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 3/56 (5%)

Query: 287 EKLADLEEESESWDNSEAEEEEKAPVLPESTEGRELTQGPAESSSLSGCGSWQPRK 342
           E+ A  EEE+   ++ EA+EEE+     E  EG E  +   E   + G G  Q  K
Sbjct: 488 EEEAAEEEEAAKEESEEAKEEEEGG---EGEEGEETKEAEEEEKKVEGAGEEQAAK 540


>gi|20143482 melanoma antigen family E, 1 [Homo sapiens]
          Length = 957

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 4/54 (7%)

Query: 288 KLADLEEESESWDNSEAEEEEKAPVLPESTEGRELTQGPAESSSLSG-CGSWQP 340
           ++A     + SW   +A     AP LP    G ++ QGP++S  L G C S  P
Sbjct: 14  RVAKATAHNSSWGEMQAPN---APGLPADVPGSDVPQGPSDSQILQGLCASEGP 64


>gi|111548650 family with sequence similarity 170, member A [Homo
           sapiens]
          Length = 329

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 19/71 (26%), Positives = 25/71 (35%)

Query: 15  GPRTLFCTEVLHAPLPQGDGNEDSPGQGEQAEEEEGGIQMNSRMRAHSPAEGASVESSSP 74
           G R  F   V H  + Q  GN +S    ++ EEE G  +           EG   E    
Sbjct: 250 GIREGFSCHVFHLTMAQLTGNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEEDLG 309

Query: 75  GPKKSDMCEGC 85
             +    C GC
Sbjct: 310 LRRSWSQCPGC 320


>gi|13994253 Golgi reassembly stacking protein 1 [Homo sapiens]
          Length = 440

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 25/77 (32%), Positives = 33/77 (42%), Gaps = 14/77 (18%)

Query: 29  LPQGDGNEDSPGQGEQAEEEEGGIQMNSRMRAHSPAEGASVESSSPGPKKSDMCEGCRSL 88
           LP G   EDSP         E G + +  M A   A G+S+E   PGP       G  S 
Sbjct: 232 LPPGPTPEDSPSL-------ETGSRQSDYMEALLQAPGSSMEDPLPGP-------GSPSH 277

Query: 89  AAGHPGYISHDKETSIK 105
           +A  P  + H  ET ++
Sbjct: 278 SAPDPDGLPHFMETPLQ 294


>gi|92110019 hypothetical protein LOC55672 [Homo sapiens]
          Length = 1214

 Score = 30.8 bits (68), Expect = 3.6
 Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 8/88 (9%)

Query: 263 KACGSRLTEKLLEGAPTEDTLVQMEKLADLEEESESWDNSEAEE--EEKAPVLPESTEGR 320
           K+ G  L E+L EG      LVQ     + E+E E     EAE+  E  AP   +  E  
Sbjct: 138 KSQGQDLQEQLAEGCRLAQHLVQKLSPENDEDEDEDVQVEEAEKVLESSAPREVQKAEES 197

Query: 321 ELTQGPAE------SSSLSGCGSWQPRK 342
           ++ +   E      S+S   C S QP K
Sbjct: 198 KVPEDSLEECAITCSNSHGPCDSNQPHK 225



 Score = 30.8 bits (68), Expect = 3.6
 Identities = 28/88 (31%), Positives = 38/88 (43%), Gaps = 8/88 (9%)

Query: 263 KACGSRLTEKLLEGAPTEDTLVQMEKLADLEEESESWDNSEAEE--EEKAPVLPESTEGR 320
           K+ G  L E+L EG      LVQ     + E+E E     EAE+  E  AP   +  E  
Sbjct: 409 KSQGQDLQEQLAEGCRLAQHLVQKLSPENDEDEDEDVQVEEAEKVLESSAPREVQKAEES 468

Query: 321 ELTQGPAE------SSSLSGCGSWQPRK 342
           ++ +   E      S+S   C S QP K
Sbjct: 469 KVPEDSLEECAITCSNSHGPCDSNQPHK 496


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.132    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,007,632
Number of Sequences: 37866
Number of extensions: 1146600
Number of successful extensions: 5587
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 5492
Number of HSP's gapped (non-prelim): 121
length of query: 579
length of database: 18,247,518
effective HSP length: 108
effective length of query: 471
effective length of database: 14,157,990
effective search space: 6668413290
effective search space used: 6668413290
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.