Search of human proteins with 22749177

Search of human proteins with 22749177

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|22749177 hypothetical protein LOC158055 [Homo sapiens]
         (203 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|22749177 hypothetical protein LOC158055 [Homo sapiens]             431   e-121
gi|169167066 PREDICTED: hypothetical protein [Homo sapiens]            31   0.63 
gi|113416187 PREDICTED: hypothetical protein [Homo sapiens]            31   0.63 
gi|113415691 PREDICTED: hypothetical protein [Homo sapiens]            31   0.63 
gi|169184025 PREDICTED: hypothetical protein [Homo sapiens]            30   1.4  
gi|169179740 PREDICTED: hypothetical protein [Homo sapiens]            30   1.4  
gi|169180137 PREDICTED: hypothetical protein [Homo sapiens]            30   1.4  
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]              30   1.4  
gi|21264602 laminin alpha 5 [Homo sapiens]                             30   1.8  
gi|58743323 XK, Kell blood group complex subunit-related family,...    29   3.1  
gi|203098098 shroom family member 3 protein [Homo sapiens]             28   4.1  
gi|124430752 kinesin family member 26B [Homo sapiens]                  28   5.3  
gi|5031703 Ras-GTPase-activating protein SH3-domain-binding prot...    28   5.3  
gi|38327552 Ras-GTPase-activating protein SH3-domain-binding pro...    28   5.3  
gi|4504053 guanine nucleotide-binding protein, beta-3 subunit [H...    28   7.0  
gi|160420317 filamin A, alpha isoform 2 [Homo sapiens]                 27   9.1  
gi|116063573 filamin A, alpha isoform 1 [Homo sapiens]                 27   9.1  
gi|239755867 PREDICTED: hypothetical protein [Homo sapiens]            27   9.1  
gi|239754489 PREDICTED: hypothetical protein [Homo sapiens]            27   9.1  
gi|239750351 PREDICTED: hypothetical protein XP_002347378 [Homo ...    27   9.1  
gi|239743069 PREDICTED: hypothetical protein XP_002342750 [Homo ...    27   9.1  
gi|239508715 PREDICTED: hypothetical protein [Homo sapiens]            27   9.1  
gi|4503179 oral-facial-digital syndrome 1 [Homo sapiens]               27   9.1  
gi|93141005 lunatic fringe isoform b [Homo sapiens]                    27   9.1  
gi|93140999 lunatic fringe isoform a [Homo sapiens]                    27   9.1  
gi|110431336 zinc finger and SCAN domain containing 1 [Homo sapi...    27   9.1  
gi|110347437 latent transforming growth factor beta binding prot...    27   9.1  
gi|110347412 latent transforming growth factor beta binding prot...    27   9.1  
gi|110347431 latent transforming growth factor beta binding prot...    27   9.1  

>gi|22749177 hypothetical protein LOC158055 [Homo sapiens]
          Length = 203

 Score =  431 bits (1109), Expect = e-121
 Identities = 203/203 (100%), Positives = 203/203 (100%)

Query: 1   MPGPLTCTPAWQGQGRAAAFLCCSFQRAGAVVGVPARWHRGRLSSQQRLRSSLGGSHPCP 60
           MPGPLTCTPAWQGQGRAAAFLCCSFQRAGAVVGVPARWHRGRLSSQQRLRSSLGGSHPCP
Sbjct: 1   MPGPLTCTPAWQGQGRAAAFLCCSFQRAGAVVGVPARWHRGRLSSQQRLRSSLGGSHPCP 60

Query: 61  QLGRRLVREGVISVPRQQGRRRCRESFSPADVAPGPICSANICLSGVRFLTCLNRVREHV 120
           QLGRRLVREGVISVPRQQGRRRCRESFSPADVAPGPICSANICLSGVRFLTCLNRVREHV
Sbjct: 61  QLGRRLVREGVISVPRQQGRRRCRESFSPADVAPGPICSANICLSGVRFLTCLNRVREHV 120

Query: 121 VGPSPSPAAPICFFPVVEALCTLRGRRCHCLPFPKRGMQRWMLPLRRGARLLPLASSKNP 180
           VGPSPSPAAPICFFPVVEALCTLRGRRCHCLPFPKRGMQRWMLPLRRGARLLPLASSKNP
Sbjct: 121 VGPSPSPAAPICFFPVVEALCTLRGRRCHCLPFPKRGMQRWMLPLRRGARLLPLASSKNP 180

Query: 181 RARSPGLDPLGSSETLWSHRGGH 203
           RARSPGLDPLGSSETLWSHRGGH
Sbjct: 181 RARSPGLDPLGSSETLWSHRGGH 203


>gi|169167066 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 262

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 38/139 (27%), Positives = 52/139 (37%), Gaps = 22/139 (15%)

Query: 58  PCPQLGRRLVREGVISVPRQQGRRRCRESFSPADVAPGPICSANICLSGVRFLTCLNRVR 117
           P P  G RL+R   + +P +           PA   P    S++  L+  R   C     
Sbjct: 49  PLPPPGPRLLRACSLLLPTE-----------PAPDLPPRRRSSSRSLARGRITQCQVAAS 97

Query: 118 EHVVGPSPS--PAAPICFFPVV--EALCTLRGRRCHCLPF---PKRGMQRWMLPLRRGAR 170
             V  P+P   P   +CF P      L  LR   C  + F   P+ G +       R  R
Sbjct: 98  PLVPPPAPPHCPRPLLCFLPAAGPAGLPPLRTSPCSGVTFAGRPRLGQESGQGVAARRRR 157

Query: 171 LLP----LASSKNPRARSP 185
            LP    LAS + PR  +P
Sbjct: 158 ALPRHPPLASERGPRTHTP 176


>gi|113416187 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 262

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 38/139 (27%), Positives = 52/139 (37%), Gaps = 22/139 (15%)

Query: 58  PCPQLGRRLVREGVISVPRQQGRRRCRESFSPADVAPGPICSANICLSGVRFLTCLNRVR 117
           P P  G RL+R   + +P +           PA   P    S++  L+  R   C     
Sbjct: 49  PLPPPGPRLLRACSLLLPTE-----------PAPDLPPRRRSSSRSLARGRITQCQVAAS 97

Query: 118 EHVVGPSPS--PAAPICFFPVV--EALCTLRGRRCHCLPF---PKRGMQRWMLPLRRGAR 170
             V  P+P   P   +CF P      L  LR   C  + F   P+ G +       R  R
Sbjct: 98  PLVPPPAPPHCPRPLLCFLPAAGPAGLPPLRTSPCSGVTFAGRPRLGQESGQGVAARRRR 157

Query: 171 LLP----LASSKNPRARSP 185
            LP    LAS + PR  +P
Sbjct: 158 ALPRHPPLASERGPRTHTP 176


>gi|113415691 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 262

 Score = 31.2 bits (69), Expect = 0.63
 Identities = 38/139 (27%), Positives = 52/139 (37%), Gaps = 22/139 (15%)

Query: 58  PCPQLGRRLVREGVISVPRQQGRRRCRESFSPADVAPGPICSANICLSGVRFLTCLNRVR 117
           P P  G RL+R   + +P +           PA   P    S++  L+  R   C     
Sbjct: 49  PLPPPGPRLLRACSLLLPTE-----------PAPDLPPRRRSSSRSLARGRITQCQVAAS 97

Query: 118 EHVVGPSPS--PAAPICFFPVV--EALCTLRGRRCHCLPF---PKRGMQRWMLPLRRGAR 170
             V  P+P   P   +CF P      L  LR   C  + F   P+ G +       R  R
Sbjct: 98  PLVPPPAPPHCPRPLLCFLPAAGPAGLPPLRTSPCSGVTFAGRPRLGQESGQGVAARRRR 157

Query: 171 LLP----LASSKNPRARSP 185
            LP    LAS + PR  +P
Sbjct: 158 ALPRHPPLASERGPRTHTP 176


>gi|169184025 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 230

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 6/78 (7%)

Query: 23  CSFQRAGAVVGVPARWHRGRLSSQQRLRSSLGGSHPCPQLGRRLVREGVISVPRQQGRRR 82
           C++       G+P RW +GRL S +++ +  GG H        +  +G      ++G  R
Sbjct: 84  CAWPACFGPSGLPQRWPKGRLPSAEQVTNHFGG-HGIDTAALEIRDKG-----PERGESR 137

Query: 83  CRESFSPADVAPGPICSA 100
            R      +  P P+ +A
Sbjct: 138 LRSESGSRENPPSPLPAA 155


>gi|169179740 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 230

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 6/78 (7%)

Query: 23  CSFQRAGAVVGVPARWHRGRLSSQQRLRSSLGGSHPCPQLGRRLVREGVISVPRQQGRRR 82
           C++       G+P RW +GRL S +++ +  GG H        +  +G      ++G  R
Sbjct: 84  CAWPACFGPSGLPQRWPKGRLPSAEQVTNHFGG-HGIDTAALEIRDKG-----PERGESR 137

Query: 83  CRESFSPADVAPGPICSA 100
            R      +  P P+ +A
Sbjct: 138 LRSESGSRENPPSPLPAA 155


>gi|169180137 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 230

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 6/78 (7%)

Query: 23  CSFQRAGAVVGVPARWHRGRLSSQQRLRSSLGGSHPCPQLGRRLVREGVISVPRQQGRRR 82
           C++       G+P RW +GRL S +++ +  GG H        +  +G      ++G  R
Sbjct: 84  CAWPACFGPSGLPQRWPKGRLPSAEQVTNHFGG-HGIDTAALEIRDKG-----PERGESR 137

Query: 83  CRESFSPADVAPGPICSA 100
            R      +  P P+ +A
Sbjct: 138 LRSESGSRENPPSPLPAA 155


>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
          Length = 2400

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 31/97 (31%), Positives = 41/97 (42%), Gaps = 9/97 (9%)

Query: 4   PLTCTPAWQGQ----GRAAAFLCCSFQRAGAVV--GVPARWHRGRLSSQQRLRSSLGGSH 57
           P TCT + QGQ     RA+A    S    G V   G P   H  R  +   L SS+    
Sbjct: 628 PSTCTSSQQGQRRHRSRASAMSSPSSPGLGRVAPRGHPRHSHY-RKDTHSPLDSSVTKQV 686

Query: 58  PCPQLGRRLVREGVISVPRQQGRRRCRESFSPADVAP 94
           P P   RR  ++G  SVPR  G      + +  ++ P
Sbjct: 687 PRPPERRRACQDG--SVPRYSGSSSSTRTQASGNLRP 721


>gi|21264602 laminin alpha 5 [Homo sapiens]
          Length = 3695

 Score = 29.6 bits (65), Expect = 1.8
 Identities = 32/108 (29%), Positives = 36/108 (33%), Gaps = 30/108 (27%)

Query: 85   ESFSPADVAPGPICSANICLSGVRFLTCLNRVREHVVGPS--PSPAAPICFFPVVEALCT 142
            E FSP  V P   C ++    G     CL         PS  P P  PI           
Sbjct: 1193 EEFSPEFVEPRVSCISSHGAFGPNSAACL---------PSRFPKPPQPIIL--------- 1234

Query: 143  LRGRRCHCLPFPKRGMQRWMLPLRRGARLLPLASSKNPRARSP-GLDP 189
               R C  +P P        LPL     L P  S   PR R P  +DP
Sbjct: 1235 ---RDCQVIPLPPG------LPLTHAQDLTPAMSPAGPRPRPPTAVDP 1273


>gi|58743323 XK, Kell blood group complex subunit-related family,
           member 7 [Homo sapiens]
          Length = 579

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 26/90 (28%), Positives = 31/90 (34%), Gaps = 5/90 (5%)

Query: 109 FLTCLNRVREHVVGPSPSPAAPICFFPVVEALCTLRGRRCHCLPFPKRGMQRWMLPLRRG 168
           F  C+     H  GP   P AP C F      C   G     +  P R + R     R G
Sbjct: 430 FFMCVYYCLLHPNGPMLGPQAPGCIFRKASEPC---GPPADAITSPPRSLPRTTGAERDG 486

Query: 169 ARLLPLASSKNPRARS--PGLDPLGSSETL 196
           A     A +  P      PGL P   + TL
Sbjct: 487 ASAGERAGTPTPPVFQVRPGLPPTPVARTL 516


>gi|203098098 shroom family member 3 protein [Homo sapiens]
          Length = 1996

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 2/54 (3%)

Query: 41  GRLSSQQRLRSSLGGSHPCPQLGRRLVREGVISVPRQQGRRRCRESFSPADVAP 94
           GR +     ++   G    P LG  L R+  +S PR +GR     SF+  D +P
Sbjct: 691 GRPTCAVNTKAEDPGRKAAPDLGSHLDRQ--VSYPRPEGRTGASASFNSTDPSP 742


>gi|124430752 kinesin family member 26B [Homo sapiens]
          Length = 2108

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/44 (31%), Positives = 23/44 (52%)

Query: 13   GQGRAAAFLCCSFQRAGAVVGVPARWHRGRLSSQQRLRSSLGGS 56
            G+   + + C S +RA ++  V +R H G+  +  R   SLG S
Sbjct: 1670 GRATVSHYECLSLERAESLSSVSSRLHAGKDGTMPRAGRSLGRS 1713


>gi|5031703 Ras-GTPase-activating protein SH3-domain-binding protein
           [Homo sapiens]
          Length = 466

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 4/66 (6%)

Query: 31  VVGVPARWHRGRLSSQQRLRSSLGGSHPCPQLGRR--LVREGVISVPRQQGRRRCRESFS 88
           V G+P   H  ++ + Q    S   S   PQ  +R   VRE  I++P Q+G R  RE+  
Sbjct: 267 VTGIPP--HVVKVPASQPRPESKPESQIPPQRPQRDQRVREQRINIPPQRGPRPIREAGE 324

Query: 89  PADVAP 94
             D+ P
Sbjct: 325 QGDIEP 330


>gi|38327552 Ras-GTPase-activating protein SH3-domain-binding
           protein [Homo sapiens]
          Length = 466

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 4/66 (6%)

Query: 31  VVGVPARWHRGRLSSQQRLRSSLGGSHPCPQLGRR--LVREGVISVPRQQGRRRCRESFS 88
           V G+P   H  ++ + Q    S   S   PQ  +R   VRE  I++P Q+G R  RE+  
Sbjct: 267 VTGIPP--HVVKVPASQPRPESKPESQIPPQRPQRDQRVREQRINIPPQRGPRPIREAGE 324

Query: 89  PADVAP 94
             D+ P
Sbjct: 325 QGDIEP 330


>gi|4504053 guanine nucleotide-binding protein, beta-3 subunit [Homo
           sapiens]
          Length = 340

 Score = 27.7 bits (60), Expect = 7.0
 Identities = 18/45 (40%), Positives = 20/45 (44%), Gaps = 5/45 (11%)

Query: 98  CSANICLSGVRFLTCLNRVREHVVGPSPSPAAPICFFPVVEALCT 142
           C A+  L  VR  TC      H      S    ICFFP  EA+CT
Sbjct: 204 CDASAKLWDVREGTCRQTFTGH-----ESDINAICFFPNGEAICT 243


>gi|160420317 filamin A, alpha isoform 2 [Homo sapiens]
          Length = 2647

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 165 LRRGARLLPLASSKNPRARSPGLDPLGS 192
           L+ GA L P  + K  RA  PG++P G+
Sbjct: 269 LKPGAPLRPKLNPKKARAYGPGIEPTGN 296


>gi|116063573 filamin A, alpha isoform 1 [Homo sapiens]
          Length = 2639

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 12/28 (42%), Positives = 17/28 (60%)

Query: 165 LRRGARLLPLASSKNPRARSPGLDPLGS 192
           L+ GA L P  + K  RA  PG++P G+
Sbjct: 269 LKPGAPLRPKLNPKKARAYGPGIEPTGN 296


>gi|239755867 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 93

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 12/70 (17%)

Query: 1  MPGPLTCTPAWQGQGRAAA----FLCCSFQRAGAVVGVPARWHRGRLSSQQRLRSSLGGS 56
          +P  L C P  +GQ  A +    F   +  R  AV GV        L    R  +S G  
Sbjct: 22 IPAALPCGPQTRGQAAAGSGARQFGPHAASRRAAVQGV--------LGGAPRFCASEGAG 73

Query: 57 HPCPQLGRRL 66
           P P+LGR L
Sbjct: 74 GPLPRLGRLL 83


>gi|239754489 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 228

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 4/44 (9%)

Query: 157 GMQRWMLPLRRGARLLPLASSKNPRARSPGLDPLGSSETLWSHR 200
           G++R  L  RRG R          RAR PG D  G+  +L +HR
Sbjct: 123 GLRRRRLQRRRGGR----GGRGAGRARKPGPDRAGAERSLPAHR 162


>gi|239750351 PREDICTED: hypothetical protein XP_002347378 [Homo
          sapiens]
          Length = 93

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 12/70 (17%)

Query: 1  MPGPLTCTPAWQGQGRAAA----FLCCSFQRAGAVVGVPARWHRGRLSSQQRLRSSLGGS 56
          +P  L C P  +GQ  A +    F   +  R  AV GV        L    R  +S G  
Sbjct: 22 IPAALPCGPQTRGQAAAGSGARQFGPHAASRRAAVQGV--------LGGAPRFCASEGAG 73

Query: 57 HPCPQLGRRL 66
           P P+LGR L
Sbjct: 74 GPLPRLGRLL 83


>gi|239743069 PREDICTED: hypothetical protein XP_002342750 [Homo
           sapiens]
          Length = 231

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 4/44 (9%)

Query: 157 GMQRWMLPLRRGARLLPLASSKNPRARSPGLDPLGSSETLWSHR 200
           G++R  L  RRG R          RAR PG D  G+  +L +HR
Sbjct: 126 GLRRRRLQRRRGGR----GGRGAGRARKPGPDRAGAERSLPAHR 165


>gi|239508715 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 231

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 4/44 (9%)

Query: 157 GMQRWMLPLRRGARLLPLASSKNPRARSPGLDPLGSSETLWSHR 200
           G++R  L  RRG R          RAR PG D  G+  +L +HR
Sbjct: 126 GLRRRRLQRRRGGR----GGRGAGRARKPGPDRAGAERSLPAHR 165


>gi|4503179 oral-facial-digital syndrome 1 [Homo sapiens]
          Length = 1012

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 2/68 (2%)

Query: 60  PQLGRRLVREGVISVPRQQGRRRCRESFSPADVAPGPICSANICLSGVRFLTCLNRVREH 119
           PQ+G    R  V+         R R   S   ++  P+  A   L    +L  L R   H
Sbjct: 702 PQVGTLEERNDVVEALTGSAASRLRGGTSSRRLSSTPLPKAKRSLESEMYLEGLGR--SH 759

Query: 120 VVGPSPSP 127
           +  PSP P
Sbjct: 760 IASPSPCP 767


>gi|93141005 lunatic fringe isoform b [Homo sapiens]
          Length = 361

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 19/64 (29%), Positives = 24/64 (37%), Gaps = 10/64 (15%)

Query: 74  VPRQQGRRRCRESFSPADVAPGPICSANICLSGV---------RFLTCLNRVREHVVGPS 124
           +P ++GRR  R    PA  AP P   A     G           + + L R R    GP 
Sbjct: 33  LPAERGRRALRSLAGPAGAAPAPGLGAAAAAPGALVRDVHSLSEYFSLLTRARRD-AGPP 91

Query: 125 PSPA 128
           P  A
Sbjct: 92  PGAA 95


>gi|93140999 lunatic fringe isoform a [Homo sapiens]
          Length = 379

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 19/64 (29%), Positives = 24/64 (37%), Gaps = 10/64 (15%)

Query: 74  VPRQQGRRRCRESFSPADVAPGPICSANICLSGV---------RFLTCLNRVREHVVGPS 124
           +P ++GRR  R    PA  AP P   A     G           + + L R R    GP 
Sbjct: 33  LPAERGRRALRSLAGPAGAAPAPGLGAAAAAPGALVRDVHSLSEYFSLLTRARRD-AGPP 91

Query: 125 PSPA 128
           P  A
Sbjct: 92  PGAA 95


>gi|110431336 zinc finger and SCAN domain containing 1 [Homo
           sapiens]
          Length = 408

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 11/54 (20%)

Query: 55  GSHPCPQLGRRLVREGVISV---------PRQQGRRRC--RESFSPADVAPGPI 97
           G  PCP+ G+  +   V++          PR++  R    RES  P D A GP+
Sbjct: 318 GPFPCPECGKVFLHNSVLTEHGKIHLLEPPRKKAPRSKGPRESVPPRDGAQGPV 371


>gi|110347437 latent transforming growth factor beta binding protein
           4 isoform c [Homo sapiens]
          Length = 1557

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 20/68 (29%), Positives = 23/68 (33%), Gaps = 10/68 (14%)

Query: 39  HRGRLSSQQRLRSSLGGSHPCPQLGRRLVREGVISVPRQQGRRRCRESFSPADVAPGPIC 98
           HRGR +      S   G+ PC   G     EG         R  C   +      PGP  
Sbjct: 761 HRGRCTDVDECSS---GAPPCGPHGHCTNTEGSF-------RCSCAPGYRAPSGRPGPCA 810

Query: 99  SANICLSG 106
             N CL G
Sbjct: 811 DVNECLEG 818


>gi|110347412 latent transforming growth factor beta binding protein
           4 isoform b [Homo sapiens]
          Length = 1587

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 20/68 (29%), Positives = 23/68 (33%), Gaps = 10/68 (14%)

Query: 39  HRGRLSSQQRLRSSLGGSHPCPQLGRRLVREGVISVPRQQGRRRCRESFSPADVAPGPIC 98
           HRGR +      S   G+ PC   G     EG         R  C   +      PGP  
Sbjct: 791 HRGRCTDVDECSS---GAPPCGPHGHCTNTEGSF-------RCSCAPGYRAPSGRPGPCA 840

Query: 99  SANICLSG 106
             N CL G
Sbjct: 841 DVNECLEG 848


>gi|110347431 latent transforming growth factor beta binding protein
           4 isoform a [Homo sapiens]
          Length = 1624

 Score = 27.3 bits (59), Expect = 9.1
 Identities = 20/68 (29%), Positives = 23/68 (33%), Gaps = 10/68 (14%)

Query: 39  HRGRLSSQQRLRSSLGGSHPCPQLGRRLVREGVISVPRQQGRRRCRESFSPADVAPGPIC 98
           HRGR +      S   G+ PC   G     EG         R  C   +      PGP  
Sbjct: 828 HRGRCTDVDECSS---GAPPCGPHGHCTNTEGSF-------RCSCAPGYRAPSGRPGPCA 877

Query: 99  SANICLSG 106
             N CL G
Sbjct: 878 DVNECLEG 885


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.140    0.476 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,073,992
Number of Sequences: 37866
Number of extensions: 549039
Number of successful extensions: 1739
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 1731
Number of HSP's gapped (non-prelim): 30
length of query: 203
length of database: 18,247,518
effective HSP length: 97
effective length of query: 106
effective length of database: 14,574,516
effective search space: 1544898696
effective search space used: 1544898696
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.