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Search of human proteins with 22749047
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|22749047 coiled-coil domain containing 24 [Homo sapiens]
(307 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|22749047 coiled-coil domain containing 24 [Homo sapiens] 621 e-178
gi|154354985 hook homolog 2 isoform 1 [Homo sapiens] 40 0.003
gi|57863314 vacuolar protein sorting 37C [Homo sapiens] 38 0.013
gi|217035133 hypothetical protein LOC55765 isoform 2 [Homo sapiens] 37 0.022
gi|217035131 hypothetical protein LOC55765 isoform 1 [Homo sapiens] 37 0.022
gi|154354987 hook homolog 2 isoform 2 [Homo sapiens] 37 0.022
gi|55749678 ninein-like [Homo sapiens] 36 0.037
gi|4885243 FOS-like antigen 1 [Homo sapiens] 35 0.064
gi|33383235 minichromosome maintenance complex component 10 isof... 35 0.064
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens] 35 0.064
gi|32698688 citron [Homo sapiens] 35 0.084
gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta ... 35 0.084
gi|170295804 estrogen receptor alpha isoform 4 [Homo sapiens] 35 0.11
gi|170295802 estrogen receptor alpha isoform 3 [Homo sapiens] 35 0.11
gi|170295800 estrogen receptor alpha isoform 2 [Homo sapiens] 35 0.11
gi|62821794 estrogen receptor alpha isoform 1 [Homo sapiens] 35 0.11
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 35 0.11
gi|169166225 PREDICTED: hypothetical protein [Homo sapiens] 35 0.11
gi|6912246 CD3E antigen, epsilon polypeptide associated protein ... 35 0.11
gi|19924099 synapsin I isoform Ia [Homo sapiens] 35 0.11
gi|19924097 synapsin I isoform Ib [Homo sapiens] 35 0.11
gi|145701012 EGL nine (C.elegans) homolog 2 [Homo sapiens] 34 0.14
gi|16604260 EGL nine (C.elegans) homolog 2 [Homo sapiens] 34 0.14
gi|124378039 SEC16 homolog A [Homo sapiens] 34 0.14
gi|33383237 minichromosome maintenance complex component 10 isof... 34 0.14
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 34 0.14
gi|169167099 PREDICTED: hypothetical protein [Homo sapiens] 34 0.19
gi|169166251 PREDICTED: hypothetical protein [Homo sapiens] 34 0.19
gi|169166247 PREDICTED: hypothetical protein [Homo sapiens] 34 0.19
gi|169166241 PREDICTED: hypothetical protein [Homo sapiens] 34 0.19
>gi|22749047 coiled-coil domain containing 24 [Homo sapiens]
Length = 307
Score = 621 bits (1601), Expect = e-178
Identities = 307/307 (100%), Positives = 307/307 (100%)
Query: 1 MLRHSPSLWELVEEHVPLRERREVKRILGEAAVDLSLELRAEVAMLRALLQEARSSQAPS 60
MLRHSPSLWELVEEHVPLRERREVKRILGEAAVDLSLELRAEVAMLRALLQEARSSQAPS
Sbjct: 1 MLRHSPSLWELVEEHVPLRERREVKRILGEAAVDLSLELRAEVAMLRALLQEARSSQAPS 60
Query: 61 SRPISDPSSLLAPPPLLKDLLRQELRQLLQGLRHKAICEGRDQAQAWVQYSPRVLHFALE 120
SRPISDPSSLLAPPPLLKDLLRQELRQLLQGLRHKAICEGRDQAQAWVQYSPRVLHFALE
Sbjct: 61 SRPISDPSSLLAPPPLLKDLLRQELRQLLQGLRHKAICEGRDQAQAWVQYSPRVLHFALE 120
Query: 121 EPRCDLPEQEIFQMRGGGPSSGHRDLSIIKDQLNVSNIDQVARHLRGLLEEECHTLEREI 180
EPRCDLPEQEIFQMRGGGPSSGHRDLSIIKDQLNVSNIDQVARHLRGLLEEECHTLEREI
Sbjct: 121 EPRCDLPEQEIFQMRGGGPSSGHRDLSIIKDQLNVSNIDQVARHLRGLLEEECHTLEREI 180
Query: 181 LILQRCLEEEYLRPCHPSEAALEPTLAELKEQKKAMEQELQASVGPSCVSPNHRQRPLGS 240
LILQRCLEEEYLRPCHPSEAALEPTLAELKEQKKAMEQELQASVGPSCVSPNHRQRPLGS
Sbjct: 181 LILQRCLEEEYLRPCHPSEAALEPTLAELKEQKKAMEQELQASVGPSCVSPNHRQRPLGS 240
Query: 241 STQGLRPPLPLCGVAPLQCCLPAPPLEPYLRPRGQSATHRWGRQLQCSPREGPASTPMSS 300
STQGLRPPLPLCGVAPLQCCLPAPPLEPYLRPRGQSATHRWGRQLQCSPREGPASTPMSS
Sbjct: 241 STQGLRPPLPLCGVAPLQCCLPAPPLEPYLRPRGQSATHRWGRQLQCSPREGPASTPMSS 300
Query: 301 AAPQAPA 307
AAPQAPA
Sbjct: 301 AAPQAPA 307
>gi|154354985 hook homolog 2 isoform 1 [Homo sapiens]
Length = 719
Score = 40.0 bits (92), Expect = 0.003
Identities = 49/204 (24%), Positives = 93/204 (45%), Gaps = 13/204 (6%)
Query: 22 REVKRILGE--AAVDLSLELRAEVAMLRALLQEARSSQAPSSRPISDPSSLLAPPPLLKD 79
+E +R+L E + + + ELR R L Q A S P+S P+ + ++ + P L +
Sbjct: 402 KEKERLLAERDSLREANEELRCAQLQPRGLTQ-ADPSLDPTSTPVDNLAAEILPAELRET 460
Query: 80 LLRQELRQLLQGLRHKAICEGRDQAQAWVQYSPRVLHFALEEPRCDLPEQEIFQMRGGGP 139
LLR +L + A E +++ Q ++ + R H + R L +Q++ ++R
Sbjct: 461 LLRLQLENKRLCRQEAADRERQEELQRHLEDANRARHGLETQHR--LNQQQLSELR---- 514
Query: 140 SSGHRDLSIIKDQLNVSNIDQVARHLRGLLEEECHTLEREILILQRCLEEEYLRPCH-PS 198
+ DL + D ++ L+ LEE L L LQR + EY+ P+
Sbjct: 515 -AQVEDLQKALQEQGGKTEDAISILLKRKLEEHLQKLHEADLELQR--KREYIEELEPPT 571
Query: 199 EAALEPTLAELKEQKKAMEQELQA 222
+++ + EL+ + + +L+A
Sbjct: 572 DSSTARRIEELQHNLQKKDADLRA 595
>gi|57863314 vacuolar protein sorting 37C [Homo sapiens]
Length = 355
Score = 37.7 bits (86), Expect = 0.013
Identities = 36/117 (30%), Positives = 45/117 (38%), Gaps = 13/117 (11%)
Query: 194 PCHPSEAALEPTLAELKEQKKAMEQ-ELQASVGPSCVSPNHRQRPLGSSTQGLRPPLPLC 252
P P P + E + AM L S PS P+G + G PP P
Sbjct: 178 PVRPVPQGTPPVVEEQPQPPLAMPPYPLPYSPSPSL--------PVGPTAHGALPPAPFP 229
Query: 253 GVA-PLQCCLPAPPLEP--YLRPRGQSATHRWGRQLQCSPREGPASTPMSSAAPQAP 306
V+ P P P P L PRG +A + W Q PR G TPM ++ P P
Sbjct: 230 VVSQPSFYSGPLGPTYPAAQLGPRG-AAGYSWSPQRSMPPRPGYPGTPMGASGPGYP 285
>gi|217035133 hypothetical protein LOC55765 isoform 2 [Homo sapiens]
Length = 578
Score = 37.0 bits (84), Expect = 0.022
Identities = 44/158 (27%), Positives = 68/158 (43%), Gaps = 23/158 (14%)
Query: 157 NIDQVARHLR--GLLEEECHTLEREILILQRCLEEEYLRPCHPSEAALEPTLAELKEQKK 214
N+ + AR R +L+EE +++ LQRCL E R P AA P EL
Sbjct: 127 NLSRQARRQRKHSMLQEE-----KKLQELQRCLVER-RRNSEPPPAAALPLGRELSASDD 180
Query: 215 A-------MEQELQASVGPSCVSPNHRQRPLGSST-QGLRPPLPLCGVAPLQCCLPAPPL 266
+ +E+E P SP RPL T +GL+P P G +P + + P
Sbjct: 181 SSLSDGLLLEEEESQVPKPPPESPAPPSRPLPPQTLEGLQPTGPEAG-SPERAPVQNSPW 239
Query: 267 E------PYLRPRGQSATHRWGRQLQCSPREGPASTPM 298
+ PY +PR S +P++GP+++ +
Sbjct: 240 KETSLDHPYEKPRKSSEPWSESSSPATTPQDGPSASSL 277
>gi|217035131 hypothetical protein LOC55765 isoform 1 [Homo sapiens]
Length = 663
Score = 37.0 bits (84), Expect = 0.022
Identities = 44/158 (27%), Positives = 68/158 (43%), Gaps = 23/158 (14%)
Query: 157 NIDQVARHLR--GLLEEECHTLEREILILQRCLEEEYLRPCHPSEAALEPTLAELKEQKK 214
N+ + AR R +L+EE +++ LQRCL E R P AA P EL
Sbjct: 212 NLSRQARRQRKHSMLQEE-----KKLQELQRCLVER-RRNSEPPPAAALPLGRELSASDD 265
Query: 215 A-------MEQELQASVGPSCVSPNHRQRPLGSST-QGLRPPLPLCGVAPLQCCLPAPPL 266
+ +E+E P SP RPL T +GL+P P G +P + + P
Sbjct: 266 SSLSDGLLLEEEESQVPKPPPESPAPPSRPLPPQTLEGLQPTGPEAG-SPERAPVQNSPW 324
Query: 267 E------PYLRPRGQSATHRWGRQLQCSPREGPASTPM 298
+ PY +PR S +P++GP+++ +
Sbjct: 325 KETSLDHPYEKPRKSSEPWSESSSPATTPQDGPSASSL 362
>gi|154354987 hook homolog 2 isoform 2 [Homo sapiens]
Length = 717
Score = 37.0 bits (84), Expect = 0.022
Identities = 49/204 (24%), Positives = 92/204 (45%), Gaps = 15/204 (7%)
Query: 22 REVKRILGE--AAVDLSLELRAEVAMLRALLQEARSSQAPSSRPISDPSSLLAPPPLLKD 79
+E +R+L E + + + ELR R L Q A S P+S P+ + ++ + P L +
Sbjct: 402 KEKERLLAERDSLREANEELRCAQLQPRGLTQ-ADPSLDPTSTPVDNLAAEILPAELRET 460
Query: 80 LLRQELRQLLQGLRHKAICEGRDQAQAWVQYSPRVLHFALEEPRCDLPEQEIFQMRGGGP 139
LLR +L + A E +++ Q ++ + R H + R L +Q++ ++R
Sbjct: 461 LLRLQLENKRLCRQEAADRERQEELQRHLEDANRARHGLETQHR--LNQQQLSELR---- 514
Query: 140 SSGHRDLSIIKDQLNVSNIDQVARHLRGLLEEECHTLEREILILQRCLEEEYLRPCH-PS 198
+ DL + D + L+ LEE L L LQR + EY+ P+
Sbjct: 515 -AQVEDLQKALQEQGGKTEDSIL--LKRKLEEHLQKLHEADLELQR--KREYIEELEPPT 569
Query: 199 EAALEPTLAELKEQKKAMEQELQA 222
+++ + EL+ + + +L+A
Sbjct: 570 DSSTARRIEELQHNLQKKDADLRA 593
>gi|55749678 ninein-like [Homo sapiens]
Length = 1382
Score = 36.2 bits (82), Expect = 0.037
Identities = 48/188 (25%), Positives = 73/188 (38%), Gaps = 19/188 (10%)
Query: 116 HFALEEPRCDLPEQEIFQMRGGGPSSGHRDLSIIKDQLNVSNIDQVARHLRGLLEEECHT 175
H L++ R + + ++ G G RDL++ ++ + RG E
Sbjct: 727 HSHLQQIRREAEAELSGELSGLGALPARRDLTLELEEPPQGPLP------RGSQRSEQLE 780
Query: 176 LEREILILQRCLEEEYLRPCHPSEAALEPTLAELKEQKK----AMEQELQASVGPSCVSP 231
LER L LQ C E+ + C ALE EL K+ ++E E+QA V+
Sbjct: 781 LERA-LKLQPCASEKRAQMC--VSLALEEEELELARGKRVDGPSLEAEMQALPKDGLVAG 837
Query: 232 NHRQRPLGSSTQGLRPPLPLCGVAPLQCCLPAPPLEPYLRPRGQSATHRWGRQLQCSPRE 291
+ ++ T+GL P P CG PL P E G R + + +
Sbjct: 838 SGQE-----GTRGLLPLRPGCGERPLAWLAPGDGRESE-EAAGAGPRRRQAQDTEATQSP 891
Query: 292 GPASTPMS 299
PA P S
Sbjct: 892 APAPAPAS 899
Score = 28.5 bits (62), Expect = 7.8
Identities = 36/141 (25%), Positives = 60/141 (42%), Gaps = 19/141 (13%)
Query: 127 PEQEIFQMRGGGPSS----GHRDLSIIKDQLNVSNIDQVARHLRGLLEEECHTLEREILI 182
P+ Q+ G GP+ G+ I+ +L + + + + LR LE + + EREI
Sbjct: 590 PDGRRRQLPGLGPAGISFLGNSAPVSIETELMMEQVKEHYQDLRTQLETKVNYYEREIAA 649
Query: 183 LQRCLEEEY--LRPCHPSEAAL----EPTLAELKEQKKAMEQELQASVGPSCVSPNHRQR 236
L+R E+E + E ++ + L EL E+ + + LQ + + P Q
Sbjct: 650 LKRNFEKERKDMEQARRREVSVLEGQKADLEELHEKSQEVIWGLQEQLQDTARGPEPEQ- 708
Query: 237 PLGSSTQGLRP--PLPLCGVA 255
GL P LCG+A
Sbjct: 709 ------MGLAPCCTQALCGLA 723
>gi|4885243 FOS-like antigen 1 [Homo sapiens]
Length = 271
Score = 35.4 bits (80), Expect = 0.064
Identities = 35/150 (23%), Positives = 56/150 (37%), Gaps = 5/150 (3%)
Query: 119 LEEPRCDLPEQEIFQMRGGGPSSGHRDLSIIKDQLNVSNIDQVARHLRGLLEEECHTLER 178
L P+ P+ +R GP G R + +V R L +C +
Sbjct: 68 LTYPQYSPPQPRPGVIRALGPPPGVRRRPCEQISPEEEERRRVRRERNKLAAAKCRNRRK 127
Query: 179 EILILQRCLEEEYLRPCHPSEAALEPTLAELKEQKKAMEQELQASVGPSCVSPNHRQRPL 238
E+ + ++ ++ L+ + EL++QK+ +E L+A P C P +
Sbjct: 128 ELTDFLQAETDKL----EDEKSGLQREIEELQKQKERLELVLEAH-RPICKIPEGAKEGD 182
Query: 239 GSSTQGLRPPLPLCGVAPLQCCLPAPPLEP 268
ST G P C P P P LEP
Sbjct: 183 TGSTSGTSSPPAPCRPVPCISLSPGPVLEP 212
>gi|33383235 minichromosome maintenance complex component 10 isoform
2 [Homo sapiens]
Length = 874
Score = 35.4 bits (80), Expect = 0.064
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 10/107 (9%)
Query: 202 LEPTLAELKEQKKAMEQELQASVGPSCVSPNHRQRPLGSSTQGLRPPLPLCGVAPLQ--C 259
L+ L L+EQ KA++++L+ + SP Q+ S + RPPL V +Q
Sbjct: 115 LQEELRNLQEQMKALQEQLKVTTIKQTASPARLQK---SPEKSPRPPLKERRVQRIQEST 171
Query: 260 CLPAPPLEPYLRPRGQSATHRWGRQLQCSPREGPASTPMSSAAPQAP 306
C A P L PR T R R + SP + +S+ ++AP P
Sbjct: 172 CFSAELDVPAL-PR----TKRVARTPKASPPDPKSSSSRMTSAPSQP 213
>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
Length = 1411
Score = 35.4 bits (80), Expect = 0.064
Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 6/79 (7%)
Query: 145 DLSIIKDQLNVSNIDQVARHLRGLLEEECHTLEREILILQRCLEEEYLRPCHPSEAALEP 204
+LS +KD+L S + ++ + E+E + IL L++ +E H + +E
Sbjct: 854 ELSTVKDKL--SKVSDSLKNSKSEFEKENQKGKAAILDLEKTCKELK----HQLQVQMEN 907
Query: 205 TLAELKEQKKAMEQELQAS 223
TL E KE KK++E+E +AS
Sbjct: 908 TLKEQKELKKSLEKEKEAS 926
>gi|32698688 citron [Homo sapiens]
Length = 2027
Score = 35.0 bits (79), Expect = 0.084
Identities = 33/126 (26%), Positives = 59/126 (46%), Gaps = 14/126 (11%)
Query: 121 EPRCDLPEQEIFQMRGGGPSSGHRDLSIIKDQLNVSNIDQVARHL-RGLLEEECHTLERE 179
+ +C EQE+ ++ HR +S ++ L+ ++ A R LLE++ T E
Sbjct: 462 QDKCHKMEQEMTRL--------HRRVSEVEAVLSQKEVELKASETQRSLLEQDLATYITE 513
Query: 180 ILILQRCLEEEYLRPCHPSEAALEPTLAELKEQKKAM----EQELQASVGPSCVSPNHRQ 235
L+R LE+ + + AL+ L +++EQ + + EQE QA V + N +
Sbjct: 514 CSSLKRSLEQARMEVSQEDDKALQ-LLHDIREQSRKLQEIKEQEYQAQVEEMRLMMNQLE 572
Query: 236 RPLGSS 241
L S+
Sbjct: 573 EDLVSA 578
>gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta [Homo
sapiens]
Length = 1983
Score = 35.0 bits (79), Expect = 0.084
Identities = 51/199 (25%), Positives = 85/199 (42%), Gaps = 41/199 (20%)
Query: 36 SLELRAEVAMLRALLQEARSSQAPSSRPISDPSSLLAPPPLLKDLLRQELRQLLQGLRHK 95
S + E+A LRA L+ R + A + + RQEL + H
Sbjct: 891 SAQAEEELAALRAELRGLRGALAAA------------------EAKRQELEET-----HV 927
Query: 96 AICEGRDQAQAWVQYSPRVLHFALEEPRCDLPEQEIFQMRGGGPSSGHRDLSIIKDQLNV 155
+I + ++ +Q L A E RC L + Q+ G R ++D+ V
Sbjct: 928 SITQEKNDLALQLQAEQDNLADA--EERCHLLIKSKVQLEGKVKELSER----LEDEEEV 981
Query: 156 SNIDQVARHLRGLLEEECHTLEREILILQRCLE---------EEYLRPCHPSEAALEPTL 206
N D AR R LE+EC L+++I L+ L E ++ AAL+ ++
Sbjct: 982 -NADLAAR--RRKLEDECTELKKDIDDLKLTLAKAEKEKQATENKVKNLTEEMAALDESV 1038
Query: 207 AELKEQKKAMEQELQASVG 225
A L ++KKA+++ Q ++G
Sbjct: 1039 ARLTKEKKALQEAHQQALG 1057
>gi|170295804 estrogen receptor alpha isoform 4 [Homo sapiens]
Length = 595
Score = 34.7 bits (78), Expect = 0.11
Identities = 27/97 (27%), Positives = 36/97 (37%), Gaps = 1/97 (1%)
Query: 183 LQRCLEEEYLRPCHPSEAALEPTLAELKEQKKAMEQELQASVGPSCVSPNHRQRPLGSST 242
L+R L E YL P+ A A ++ G P GS+
Sbjct: 35 LERPLGEVYLDSSKPAVYNYPEGAAYEFNAAAAANAQVYGQTGLP-YGPGSEAAAFGSNG 93
Query: 243 QGLRPPLPLCGVAPLQCCLPAPPLEPYLRPRGQSATH 279
G PPL +PL P P L P+L+P GQ +
Sbjct: 94 LGGFPPLNSVSPSPLMLLHPPPQLSPFLQPHGQQVPY 130
>gi|170295802 estrogen receptor alpha isoform 3 [Homo sapiens]
Length = 595
Score = 34.7 bits (78), Expect = 0.11
Identities = 27/97 (27%), Positives = 36/97 (37%), Gaps = 1/97 (1%)
Query: 183 LQRCLEEEYLRPCHPSEAALEPTLAELKEQKKAMEQELQASVGPSCVSPNHRQRPLGSST 242
L+R L E YL P+ A A ++ G P GS+
Sbjct: 35 LERPLGEVYLDSSKPAVYNYPEGAAYEFNAAAAANAQVYGQTGLP-YGPGSEAAAFGSNG 93
Query: 243 QGLRPPLPLCGVAPLQCCLPAPPLEPYLRPRGQSATH 279
G PPL +PL P P L P+L+P GQ +
Sbjct: 94 LGGFPPLNSVSPSPLMLLHPPPQLSPFLQPHGQQVPY 130
>gi|170295800 estrogen receptor alpha isoform 2 [Homo sapiens]
Length = 595
Score = 34.7 bits (78), Expect = 0.11
Identities = 27/97 (27%), Positives = 36/97 (37%), Gaps = 1/97 (1%)
Query: 183 LQRCLEEEYLRPCHPSEAALEPTLAELKEQKKAMEQELQASVGPSCVSPNHRQRPLGSST 242
L+R L E YL P+ A A ++ G P GS+
Sbjct: 35 LERPLGEVYLDSSKPAVYNYPEGAAYEFNAAAAANAQVYGQTGLP-YGPGSEAAAFGSNG 93
Query: 243 QGLRPPLPLCGVAPLQCCLPAPPLEPYLRPRGQSATH 279
G PPL +PL P P L P+L+P GQ +
Sbjct: 94 LGGFPPLNSVSPSPLMLLHPPPQLSPFLQPHGQQVPY 130
>gi|62821794 estrogen receptor alpha isoform 1 [Homo sapiens]
Length = 595
Score = 34.7 bits (78), Expect = 0.11
Identities = 27/97 (27%), Positives = 36/97 (37%), Gaps = 1/97 (1%)
Query: 183 LQRCLEEEYLRPCHPSEAALEPTLAELKEQKKAMEQELQASVGPSCVSPNHRQRPLGSST 242
L+R L E YL P+ A A ++ G P GS+
Sbjct: 35 LERPLGEVYLDSSKPAVYNYPEGAAYEFNAAAAANAQVYGQTGLP-YGPGSEAAAFGSNG 93
Query: 243 QGLRPPLPLCGVAPLQCCLPAPPLEPYLRPRGQSATH 279
G PPL +PL P P L P+L+P GQ +
Sbjct: 94 LGGFPPLNSVSPSPLMLLHPPPQLSPFLQPHGQQVPY 130
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 34.7 bits (78), Expect = 0.11
Identities = 30/89 (33%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Query: 220 LQASVGPSCVSPNHRQRPLGSSTQGLRPPLPLCGVAPLQCCLPAPPLEPYLRPRGQSATH 279
LQA P P + P +T + P P PLQ LP+PPL P P Q+
Sbjct: 569 LQAPPSPLTTPPP--ETPSSIATPPPQAP-PALASPPLQG-LPSPPLSPLATPPPQAPPX 624
Query: 280 RWGRQLQC--SPREGPASTPMSSAAPQAP 306
LQ SP P +P+++ +PQAP
Sbjct: 625 LALPPLQAPPSPPASPPLSPLATPSPQAP 653
Score = 31.6 bits (70), Expect = 0.92
Identities = 34/116 (29%), Positives = 45/116 (38%), Gaps = 17/116 (14%)
Query: 194 PCHPSEAALEPTLAELKEQKKAMEQELQASVGPSCVSPNHRQRPLGSSTQGLRPP----L 249
P HPS+ + A Q ++ ++GP SP P G+ + + PP
Sbjct: 266 PAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAAT 325
Query: 250 PLCGVAPLQCCLPAPPLEP--YLRPRGQSATHRWGRQLQCSPREGPASTPMSSAAP 303
PL P P+PPL L P SA LQ P P +TP S A P
Sbjct: 326 PLPATLP-----PSPPLATPLPLAPPSPSAP----PSLQTLP--SPPATPPSQAPP 370
Score = 28.5 bits (62), Expect = 7.8
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
Query: 263 APPLEPYLRPRGQSATHRWGRQLQCSPREGPASTPMSSAA---PQAP 306
+PP+ P P Q+ LQ P PAS PMS +A PQAP
Sbjct: 682 SPPVSPSATPPSQAPPSLAAPPLQVPPSP-PASPPMSPSATPPPQAP 727
>gi|169166225 PREDICTED: hypothetical protein [Homo sapiens]
Length = 131
Score = 34.7 bits (78), Expect = 0.11
Identities = 31/82 (37%), Positives = 36/82 (43%), Gaps = 10/82 (12%)
Query: 233 HRQRPLGSSTQGLRPPLPLCGVAPLQCCLPAPPLEPYLRPRGQSAT-----HRWGRQLQC 287
H RP GS RP P C V P P P RPR Q++T HR Q Q
Sbjct: 10 HALRPWGSFRAPARPFPPHCIVTPFPISGWEPSSNPKRRPRSQASTPKVLLHR--EQKQE 67
Query: 288 SPREGPAS-TPM--SSAAPQAP 306
+ + GP TPM + PQAP
Sbjct: 68 TDQGGPDDRTPMGPTLGLPQAP 89
>gi|6912246 CD3E antigen, epsilon polypeptide associated protein
[Homo sapiens]
Length = 510
Score = 34.7 bits (78), Expect = 0.11
Identities = 25/105 (23%), Positives = 41/105 (39%), Gaps = 9/105 (8%)
Query: 211 EQKKAMEQELQASVGPSCVSPNHRQRPLGSSTQGLRPP-------LPLCGVAPLQCCLPA 263
E K ++++ V ++R T+G+ P P V PL+ +P
Sbjct: 265 EDKTVKQEQINTEPLEDTVLSPTKKRKRQKGTEGMEPEEGVTVESQPQVKVEPLEEAIPL 324
Query: 264 PPLEPYLRPRGQSATHRWGRQLQ--CSPREGPASTPMSSAAPQAP 306
PP + + +GQ A G + P P +P + APQ P
Sbjct: 325 PPTKKRKKEKGQMAMMEPGTEAMEPVEPEMKPLESPGGTMAPQQP 369
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 34.7 bits (78), Expect = 0.11
Identities = 31/92 (33%), Positives = 40/92 (43%), Gaps = 7/92 (7%)
Query: 221 QASVGPSCVSPNHRQRPLGSSTQGLRPPLPLCGVAPLQCCLPAPPLEPYLRPRGQSATHR 280
Q GP P +QRP Q L P G +PL LP+P P +P Q+A
Sbjct: 469 QPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAG-SPLPQRLPSPTSAPQ-QPASQAAPPT 526
Query: 281 WGRQLQCSPREG-----PASTPMSSAAPQAPA 307
G+ Q P G PA+ P +S +PQ A
Sbjct: 527 QGQGRQSRPVAGGPGAPPAARPPASPSPQRQA 558
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 34.7 bits (78), Expect = 0.11
Identities = 31/92 (33%), Positives = 40/92 (43%), Gaps = 7/92 (7%)
Query: 221 QASVGPSCVSPNHRQRPLGSSTQGLRPPLPLCGVAPLQCCLPAPPLEPYLRPRGQSATHR 280
Q GP P +QRP Q L P G +PL LP+P P +P Q+A
Sbjct: 469 QPGPGPQRQGPPLQQRPPPQGQQHLSGLGPPAG-SPLPQRLPSPTSAPQ-QPASQAAPPT 526
Query: 281 WGRQLQCSPREG-----PASTPMSSAAPQAPA 307
G+ Q P G PA+ P +S +PQ A
Sbjct: 527 QGQGRQSRPVAGGPGAPPAARPPASPSPQRQA 558
>gi|145701012 EGL nine (C.elegans) homolog 2 [Homo sapiens]
Length = 407
Score = 34.3 bits (77), Expect = 0.14
Identities = 23/67 (34%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Query: 241 STQGLRPPLPLCGVAPLQCCLPAPPLEPYLRPRGQSATHRWGRQLQCSPREGPASTP-MS 299
+ QG RP P A P+P P+ R Q A G CS G AS M
Sbjct: 108 AAQGARPEAPKRKWAEDGGDAPSPSKRPWARQENQEAEREGGMSCSCSSGSGEASAGLME 167
Query: 300 SAAPQAP 306
A P AP
Sbjct: 168 EALPSAP 174
>gi|16604260 EGL nine (C.elegans) homolog 2 [Homo sapiens]
Length = 407
Score = 34.3 bits (77), Expect = 0.14
Identities = 23/67 (34%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Query: 241 STQGLRPPLPLCGVAPLQCCLPAPPLEPYLRPRGQSATHRWGRQLQCSPREGPASTP-MS 299
+ QG RP P A P+P P+ R Q A G CS G AS M
Sbjct: 108 AAQGARPEAPKRKWAEDGGDAPSPSKRPWARQENQEAEREGGMSCSCSSGSGEASAGLME 167
Query: 300 SAAPQAP 306
A P AP
Sbjct: 168 EALPSAP 174
>gi|124378039 SEC16 homolog A [Homo sapiens]
Length = 2357
Score = 34.3 bits (77), Expect = 0.14
Identities = 40/157 (25%), Positives = 58/157 (36%), Gaps = 24/157 (15%)
Query: 156 SNIDQVARHLRGLLEEECHTLEREILILQRCLEEEYLRPCHPSEAALEPTLAELKEQKKA 215
S+ + V HL G+ E + + C+ + + C P+ A + + L++
Sbjct: 609 SSFEPVKSHLVGVKPFEADRANVVGEVRETCVRQ---KQCRPAAALPDASPGNLEQPPDN 665
Query: 216 MEQELQASVGPSCVSPNHRQRPLGSSTQGLRPPLPLCGVAPLQCCLPAPPLEPYLRPRG- 274
ME V P PL S+T+ + LP G PL PAP P R +G
Sbjct: 666 METLCAPQVCPL---------PLNSTTEAVHM-LPHAGAPPLDTVYPAPEKRPSARTQGP 715
Query: 275 ----QSATHRWGRQLQCSPREGPASTPMSSAAPQAPA 307
AT W + E P AP APA
Sbjct: 716 VKCESPATTLWAQS------ELPDFGGNVLLAPAAPA 746
>gi|33383237 minichromosome maintenance complex component 10 isoform
1 [Homo sapiens]
Length = 875
Score = 34.3 bits (77), Expect = 0.14
Identities = 34/108 (31%), Positives = 51/108 (47%), Gaps = 11/108 (10%)
Query: 202 LEPTLAELKEQKKAMEQELQASVGPSCVSPNHRQR-PLGSSTQGLRPPLPLCGVAPLQ-- 258
L+ L L+EQ KA++++L+ + SP Q+ P+ S RPPL V +Q
Sbjct: 115 LQEELRNLQEQMKALQEQLKVTTIKQTASPARLQKSPVEKSP---RPPLKERRVQRIQES 171
Query: 259 CCLPAPPLEPYLRPRGQSATHRWGRQLQCSPREGPASTPMSSAAPQAP 306
C A P L PR T R R + SP + +S+ ++AP P
Sbjct: 172 TCFSAELDVPAL-PR----TKRVARTPKASPPDPKSSSSRMTSAPSQP 214
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 34.3 bits (77), Expect = 0.14
Identities = 35/124 (28%), Positives = 48/124 (38%), Gaps = 20/124 (16%)
Query: 198 SEAALEPTLAELKEQKKAMEQELQASVGPSCVSPNHRQRPLGSSTQGLRPPLPLCGVAPL 257
S A E +L + + + L AS S +SP + RP ST RP P P
Sbjct: 429 SALARERSLKKRQSLPASPRARLSASTA-SELSPKSKARPSSPSTSWHRPASPCPSPGPG 487
Query: 258 QCCLPAPPLEPYLRPRGQSATHRWGRQLQCSPREGP--------------ASTPMSSAAP 303
P PP PRG +A+ + + + +E P AS SAAP
Sbjct: 488 HTLPPKPP-----SPRGTTASPKGRVRRKEEAKESPSAAGPEDKSQSKRRASNEKESAAP 542
Query: 304 QAPA 307
+PA
Sbjct: 543 ASPA 546
>gi|169167099 PREDICTED: hypothetical protein [Homo sapiens]
Length = 131
Score = 33.9 bits (76), Expect = 0.19
Identities = 31/91 (34%), Positives = 38/91 (41%), Gaps = 10/91 (10%)
Query: 224 VGPSCVSPNHRQRPLGSSTQGLRPPLPLCGVAPLQCCLPAPPLEPYLRPRGQSAT----- 278
+GP H RP GS RP P C V P P +P PR ++T
Sbjct: 1 MGPCRCRRQHALRPWGSFRAPARPFPPHCIVTPFPISRWEPSSDPKRSPRSPASTPKVLL 60
Query: 279 HRWGRQLQCSPREGPAS-TPM--SSAAPQAP 306
HR Q Q + + GP TPM + PQAP
Sbjct: 61 HR--EQKQETDQGGPDDRTPMGPTLGLPQAP 89
>gi|169166251 PREDICTED: hypothetical protein [Homo sapiens]
Length = 131
Score = 33.9 bits (76), Expect = 0.19
Identities = 31/91 (34%), Positives = 38/91 (41%), Gaps = 10/91 (10%)
Query: 224 VGPSCVSPNHRQRPLGSSTQGLRPPLPLCGVAPLQCCLPAPPLEPYLRPRGQSAT----- 278
+GP H RP GS RP P C V P P +P PR ++T
Sbjct: 1 MGPCRCRRQHALRPWGSFLAPARPFPPHCIVTPFPISRWEPSSDPKRSPRSPASTPKVLL 60
Query: 279 HRWGRQLQCSPREGPAS-TPM--SSAAPQAP 306
HR Q Q + + GP TPM + PQAP
Sbjct: 61 HR--EQKQETDQGGPDDRTPMGPTLGLPQAP 89
>gi|169166247 PREDICTED: hypothetical protein [Homo sapiens]
Length = 131
Score = 33.9 bits (76), Expect = 0.19
Identities = 31/91 (34%), Positives = 38/91 (41%), Gaps = 10/91 (10%)
Query: 224 VGPSCVSPNHRQRPLGSSTQGLRPPLPLCGVAPLQCCLPAPPLEPYLRPRGQSAT----- 278
+GP H RP GS RP P C V P P +P PR ++T
Sbjct: 1 MGPCRCRRQHALRPWGSFLAPARPFPPHCIVTPFPISRWEPSSDPKRSPRSPASTPKVLL 60
Query: 279 HRWGRQLQCSPREGPAS-TPM--SSAAPQAP 306
HR Q Q + + GP TPM + PQAP
Sbjct: 61 HR--EQKQETDQGGPDDRTPMGPTLGLPQAP 89
>gi|169166241 PREDICTED: hypothetical protein [Homo sapiens]
Length = 131
Score = 33.9 bits (76), Expect = 0.19
Identities = 31/91 (34%), Positives = 38/91 (41%), Gaps = 10/91 (10%)
Query: 224 VGPSCVSPNHRQRPLGSSTQGLRPPLPLCGVAPLQCCLPAPPLEPYLRPRGQSAT----- 278
+GP H RP GS RP P C V P P +P PR ++T
Sbjct: 1 MGPCRCRRQHALRPWGSFLAPARPFPPHCIVTPFPISRWEPSSDPKRSPRSPASTPKVLL 60
Query: 279 HRWGRQLQCSPREGPAS-TPM--SSAAPQAP 306
HR Q Q + + GP TPM + PQAP
Sbjct: 61 HR--EQKQETDQGGPDDRTPMGPTLGLPQAP 89
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,290,474
Number of Sequences: 37866
Number of extensions: 749035
Number of successful extensions: 3919
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 129
Number of HSP's that attempted gapping in prelim test: 3790
Number of HSP's gapped (non-prelim): 251
length of query: 307
length of database: 18,247,518
effective HSP length: 102
effective length of query: 205
effective length of database: 14,385,186
effective search space: 2948963130
effective search space used: 2948963130
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.