CLRN3 15498

Name: CLRN3	Sequence: fasta or formatted (226aa)		NCBI GI: 22748685
Description: clarin 3		Referenced in: Auditory and Vestibular Functions
Composition: Amino acid Percentage Count Longest homopolymer A alanine 4.4 10 1 C cysteine 0.4 1 1 D aspartate 0.9 2 1 E glutamate 4.0 9 2 F phenylalanine 8.0 18 2 G glycine 6.2 14 1 H histidine 1.3 3 1 I isoleucine 8.4 19 3 K lysine 4.4 10 3 L leucine 12.4 28 2 M methionine 2.2 5 1 N asparagine 4.0 9 2 P proline 3.1 7 1 Q glutamine 4.4 10 1 R arginine 2.7 6 1 S serine 11.9 27 2 T threonine 10.2 23 2 V valine 5.3 12 1 W tryptophan 1.3 3 1 Y tyrosine 4.4 10 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 clarin 3 CLRN1 0.131 clarin 1 isoform a CLRN2 0.105 clarin 2 CLRN1 0.074 clarin 1 isoform c PI4KA 0.010 phosphatidylinositol 4-kinase type 3 alpha isoform 1 ... PI4KA 0.010 phosphatidylinositol 4-kinase type 3 alpha isoform ... GP5 0.010 glycoprotein V (platelet) LOC100133567 0.010 PREDICTED: similar to Rap guanine nucleotide exchan... RAPGEF2 0.010 Rap guanine nucleotide exchange factor 2 MS4A3 0.010 membrane-spanning 4-domains, subfamily A, member 3 i... NALCN 0.007 voltage gated channel like 1 ITGA5 0.007 integrin alpha 5 precursor GRIN2D 0.007 N-methyl-D-aspartate receptor subunit 2D precursor ... WDR33 0.007 WD repeat domain 33 isoform 2 TLR2 0.007 toll-like receptor 2 LOC100294335 0.007 PREDICTED: similar to c114 SLIT-like testicular pro... LOC100294335 0.007 PREDICTED: similar to c114 SLIT-like testicular pro... LRRC37A2 0.007 c114 SLIT-like testicular protein LRRC37A 0.007 leucine rich repeat containing 37A Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.