CLRN1 24630

Name: CLRN1	Sequence: fasta or formatted (232aa)		NCBI GI: 28144908
Description: clarin 1 isoform a		Referenced in: Auditory and Vestibular Functions
Other entries for this name: alt prot [120aa] clarin 1 isoform c
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.2 19 2 C cysteine 3.0 7 1 D aspartate 1.7 4 1 E glutamate 3.9 9 1 F phenylalanine 10.8 25 2 G glycine 8.6 20 1 H histidine 2.6 6 2 I isoleucine 6.0 14 2 K lysine 6.0 14 2 L leucine 11.6 27 2 M methionine 3.4 8 1 N asparagine 2.6 6 1 P proline 3.4 8 1 Q glutamine 3.0 7 2 R arginine 1.7 4 1 S serine 6.0 14 1 T threonine 5.6 13 2 V valine 7.3 17 2 W tryptophan 0.9 2 1 Y tyrosine 3.4 8 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 clarin 1 isoform a CLRN1 0.425 clarin 1 isoform c CLRN2 0.306 clarin 2 CLRN3 0.123 clarin 3 LOC100294023 0.011 PREDICTED: hypothetical protein LOC100290508 0.011 PREDICTED: hypothetical protein XP_002346946 LOC100289187 0.011 PREDICTED: hypothetical protein XP_002342783 LOC100289187 0.011 PREDICTED: hypothetical protein SLC4A8 0.007 solute carrier family 4, sodium bicarbonate cotransp... SLC4A8 0.007 solute carrier family 4, sodium bicarbonate cotransp... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.