Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: NALCN Sequence: fasta or formatted (1738aa) NCBI GI: 24119274
Description:

voltage gated channel like 1

Referenced in:

Calcium and TRP Cation Channels

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         90           2
 C cysteine            2.0         35           2
 D aspartate           4.6         80           2
 E glutamate           5.1         89           3
 F phenylalanine       6.9        120           2
 G glycine             4.6         80           2
 H histidine           2.1         36           2
 I isoleucine          6.7        116           2
 K lysine              5.1         89           2
 L leucine            11.0        192           4
 M methionine          3.7         65           2
 N asparagine          3.5         60           1
 P proline             3.9         68           2
 Q glutamine           4.3         75           3
 R arginine            6.2        108           2
 S serine              7.0        122           4
 T threonine           5.1         89           2
 V valine              8.2        143           3
 W tryptophan          1.8         31           2
 Y tyrosine            2.9         50           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   voltage gated channel like 1 
CACNA1D               0.061   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1D               0.059   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1D               0.059   calcium channel, voltage-dependent, L type, alpha 1D ...
CACNA1F               0.058   calcium channel, voltage-dependent, L type, alpha 1F...
CACNA1C               0.058   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1G               0.058   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.058   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.058   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1G               0.058   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1C               0.057   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1G               0.057   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1C               0.057   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.057   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1G               0.057   voltage-dependent calcium channel alpha 1G subunit i...
CACNA1C               0.056   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.056   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.056   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.056   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.056   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.056   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.056   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.055   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.055   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.055   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.055   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.054   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.054   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.054   calcium channel, voltage-dependent, L type, alpha 1...
CACNA1C               0.054   calcium channel, voltage-dependent, L type, alpha 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press