Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 227116303
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|227116303 ret finger protein-like 2 isoform 2 [Homo sapiens]
(378 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|227116303 ret finger protein-like 2 isoform 2 [Homo sapiens] 772 0.0
gi|148728184 ret finger protein-like 2 isoform 1 [Homo sapiens] 593 e-170
gi|227116308 ret finger protein-like 2 isoform 3 [Homo sapiens] 589 e-168
gi|227116306 ret finger protein-like 2 isoform 3 [Homo sapiens] 589 e-168
gi|149408135 ret finger protein-like 3 isoform 1 [Homo sapiens] 561 e-160
gi|5730013 ret finger protein-like 3 isoform 2 [Homo sapiens] 557 e-159
gi|149408130 ret finger protein-like 1 [Homo sapiens] 537 e-153
gi|222446629 ret finger protein-like 4A [Homo sapiens] 325 4e-89
gi|5730009 ret finger protein [Homo sapiens] 150 1e-36
gi|5901908 butyrophilin, subfamily 3, member A3 isoform a [Homo ... 149 3e-36
gi|37574628 butyrophilin, subfamily 3, member A3 isoform b [Homo... 149 3e-36
gi|153791360 ret finger protein-like 4B [Homo sapiens] 147 2e-35
gi|4557743 Mediterranean fever protein [Homo sapiens] 145 4e-35
gi|222418658 butyrophilin, subfamily 3, member A1 isoform c [Hom... 145 6e-35
gi|37595558 butyrophilin, subfamily 3, member A1 isoform a [Homo... 145 6e-35
gi|31542779 tripartite motif family-like 1 [Homo sapiens] 141 8e-34
gi|15208660 tripartite motif protein 21 [Homo sapiens] 140 1e-33
gi|166197658 butyrophilin, subfamily 1, member A1 [Homo sapiens] 134 1e-31
gi|31881693 butyrophilin, subfamily 2, member A2 isoform b [Homo... 134 1e-31
gi|6453813 butyrophilin, subfamily 2, member A2 isoform a [Homo ... 134 1e-31
gi|5921461 butyrophilin, subfamily 2, member A1 isoform 1 precur... 134 1e-31
gi|21630277 tripartite motif-containing 11 [Homo sapiens] 132 4e-31
gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens] 131 9e-31
gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens] 131 9e-31
gi|63054855 erythroblast membrane-associated protein precursor [... 126 3e-29
gi|19923536 erythroblast membrane-associated protein precursor [... 126 3e-29
gi|5454014 tripartite motif-containing 38 [Homo sapiens] 125 5e-29
gi|37595541 tripartite motif-containing 69 isoform b [Homo sapiens] 122 4e-28
gi|88999601 tripartite motif-containing 69 isoform a [Homo sapiens] 122 4e-28
gi|37622899 ring finger protein 137 [Homo sapiens] 119 6e-27
>gi|227116303 ret finger protein-like 2 isoform 2 [Homo sapiens]
Length = 378
Score = 772 bits (1993), Expect = 0.0
Identities = 378/378 (100%), Positives = 378/378 (100%)
Query: 1 MEVAELGFPETAVSQSRICLCAVLCGHWDFADMMVIRSLSLIRLEGVEGRDPVGGGNLTN 60
MEVAELGFPETAVSQSRICLCAVLCGHWDFADMMVIRSLSLIRLEGVEGRDPVGGGNLTN
Sbjct: 1 MEVAELGFPETAVSQSRICLCAVLCGHWDFADMMVIRSLSLIRLEGVEGRDPVGGGNLTN 60
Query: 61 KRPSCAPSPQDLSAQWKQLEDRGASSRRVDMAALFQEASSCPVCSDYLEKPMSLECGCAV 120
KRPSCAPSPQDLSAQWKQLEDRGASSRRVDMAALFQEASSCPVCSDYLEKPMSLECGCAV
Sbjct: 61 KRPSCAPSPQDLSAQWKQLEDRGASSRRVDMAALFQEASSCPVCSDYLEKPMSLECGCAV 120
Query: 121 CLKCINSLQKEPHGEDLLCCCSSMVSRKNKIRRNRQLERLASHIKELEPKLKKILQMNPR 180
CLKCINSLQKEPHGEDLLCCCSSMVSRKNKIRRNRQLERLASHIKELEPKLKKILQMNPR
Sbjct: 121 CLKCINSLQKEPHGEDLLCCCSSMVSRKNKIRRNRQLERLASHIKELEPKLKKILQMNPR 180
Query: 181 MRKFQVDMTLDANTANNFLLISDDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCGR 240
MRKFQVDMTLDANTANNFLLISDDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCGR
Sbjct: 181 MRKFQVDMTLDANTANNFLLISDDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCGR 240
Query: 241 HCWEVDVGTSTEWDLGVCRESVHRKGRIQLTTELGFWTVSLRDGGRLSATTVPLTFLFVD 300
HCWEVDVGTSTEWDLGVCRESVHRKGRIQLTTELGFWTVSLRDGGRLSATTVPLTFLFVD
Sbjct: 241 HCWEVDVGTSTEWDLGVCRESVHRKGRIQLTTELGFWTVSLRDGGRLSATTVPLTFLFVD 300
Query: 301 RKLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSVPPNGDQGVLSIC 360
RKLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSVPPNGDQGVLSIC
Sbjct: 301 RKLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSVPPNGDQGVLSIC 360
Query: 361 PLMNSGTTDAPVRPGEAK 378
PLMNSGTTDAPVRPGEAK
Sbjct: 361 PLMNSGTTDAPVRPGEAK 378
>gi|148728184 ret finger protein-like 2 isoform 1 [Homo sapiens]
Length = 317
Score = 593 bits (1529), Expect = e-170
Identities = 290/290 (100%), Positives = 290/290 (100%)
Query: 89 VDMAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRK 148
VDMAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRK
Sbjct: 28 VDMAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRK 87
Query: 149 NKIRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSV 208
NKIRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSV
Sbjct: 88 NKIRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSV 147
Query: 209 RSGRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRI 268
RSGRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRI
Sbjct: 148 RSGRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRI 207
Query: 269 QLTTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHV 328
QLTTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHV
Sbjct: 208 QLTTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHV 267
Query: 329 YTFRSVSAEEPLRPFLAPSVPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 378
YTFRSVSAEEPLRPFLAPSVPPNGDQGVLSICPLMNSGTTDAPVRPGEAK
Sbjct: 268 YTFRSVSAEEPLRPFLAPSVPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 317
>gi|227116308 ret finger protein-like 2 isoform 3 [Homo sapiens]
Length = 288
Score = 589 bits (1519), Expect = e-168
Identities = 288/288 (100%), Positives = 288/288 (100%)
Query: 91 MAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRKNK 150
MAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRKNK
Sbjct: 1 MAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRKNK 60
Query: 151 IRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSVRS 210
IRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSVRS
Sbjct: 61 IRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSVRS 120
Query: 211 GRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQL 270
GRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQL
Sbjct: 121 GRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQL 180
Query: 271 TTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT 330
TTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT
Sbjct: 181 TTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT 240
Query: 331 FRSVSAEEPLRPFLAPSVPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 378
FRSVSAEEPLRPFLAPSVPPNGDQGVLSICPLMNSGTTDAPVRPGEAK
Sbjct: 241 FRSVSAEEPLRPFLAPSVPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 288
>gi|227116306 ret finger protein-like 2 isoform 3 [Homo sapiens]
Length = 288
Score = 589 bits (1519), Expect = e-168
Identities = 288/288 (100%), Positives = 288/288 (100%)
Query: 91 MAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRKNK 150
MAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRKNK
Sbjct: 1 MAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRKNK 60
Query: 151 IRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSVRS 210
IRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSVRS
Sbjct: 61 IRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSVRS 120
Query: 211 GRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQL 270
GRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQL
Sbjct: 121 GRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQL 180
Query: 271 TTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT 330
TTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT
Sbjct: 181 TTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT 240
Query: 331 FRSVSAEEPLRPFLAPSVPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 378
FRSVSAEEPLRPFLAPSVPPNGDQGVLSICPLMNSGTTDAPVRPGEAK
Sbjct: 241 FRSVSAEEPLRPFLAPSVPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 288
>gi|149408135 ret finger protein-like 3 isoform 1 [Homo sapiens]
Length = 317
Score = 561 bits (1445), Expect = e-160
Identities = 274/290 (94%), Positives = 280/290 (96%)
Query: 89 VDMAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRK 148
VDMAALFQEASSCPVCSDYLEKPMSLECGC VCLKCINSLQKEPHGEDLLCCC SMVS++
Sbjct: 28 VDMAALFQEASSCPVCSDYLEKPMSLECGCTVCLKCINSLQKEPHGEDLLCCCCSMVSQR 87
Query: 149 NKIRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSV 208
NKIR NRQLERL SHIKELEPKLKKILQMNPRMRKFQVDMTLDA+TANNFLLISDDLRSV
Sbjct: 88 NKIRPNRQLERLVSHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSV 147
Query: 209 RSGRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRI 268
RSG I QNRQDLAERFDVSVCILGSPRFTCGRH WEVDVGTSTEWDLGVCRESVH KG+I
Sbjct: 148 RSGLITQNRQDLAERFDVSVCILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHCKGKI 207
Query: 269 QLTTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHV 328
QLTTELGFWTVSLRDG RLSA+TVPLTFL VDRKLQRVGIFLDMGMQNVSFFDAESGSHV
Sbjct: 208 QLTTELGFWTVSLRDGSRLSASTVPLTFLLVDRKLQRVGIFLDMGMQNVSFFDAESGSHV 267
Query: 329 YTFRSVSAEEPLRPFLAPSVPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 378
YTFRSVSAEEPLRPFLAPS+PPNGDQGVLSICPLMNSGTTDAPVRPGEAK
Sbjct: 268 YTFRSVSAEEPLRPFLAPSIPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 317
>gi|5730013 ret finger protein-like 3 isoform 2 [Homo sapiens]
Length = 288
Score = 557 bits (1435), Expect = e-159
Identities = 272/288 (94%), Positives = 278/288 (96%)
Query: 91 MAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRKNK 150
MAALFQEASSCPVCSDYLEKPMSLECGC VCLKCINSLQKEPHGEDLLCCC SMVS++NK
Sbjct: 1 MAALFQEASSCPVCSDYLEKPMSLECGCTVCLKCINSLQKEPHGEDLLCCCCSMVSQRNK 60
Query: 151 IRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSVRS 210
IR NRQLERL SHIKELEPKLKKILQMNPRMRKFQVDMTLDA+TANNFLLISDDLRSVRS
Sbjct: 61 IRPNRQLERLVSHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSVRS 120
Query: 211 GRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQL 270
G I QNRQDLAERFDVSVCILGSPRFTCGRH WEVDVGTSTEWDLGVCRESVH KG+IQL
Sbjct: 121 GLITQNRQDLAERFDVSVCILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHCKGKIQL 180
Query: 271 TTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT 330
TTELGFWTVSLRDG RLSA+TVPLTFL VDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT
Sbjct: 181 TTELGFWTVSLRDGSRLSASTVPLTFLLVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT 240
Query: 331 FRSVSAEEPLRPFLAPSVPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 378
FRSVSAEEPLRPFLAPS+PPNGDQGVLSICPLMNSGTTDAPVRPGEAK
Sbjct: 241 FRSVSAEEPLRPFLAPSIPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 288
>gi|149408130 ret finger protein-like 1 [Homo sapiens]
Length = 317
Score = 537 bits (1383), Expect = e-153
Identities = 263/290 (90%), Positives = 271/290 (93%)
Query: 89 VDMAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRK 148
VDMAALFQEASSCPVCSDYLEKPMSLECGCAVC KCINSLQKEPHGEDLLCCC SMVS+K
Sbjct: 28 VDMAALFQEASSCPVCSDYLEKPMSLECGCAVCFKCINSLQKEPHGEDLLCCCCSMVSQK 87
Query: 149 NKIRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSV 208
NKIR + QLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDA+TANNFLLISDDLRSV
Sbjct: 88 NKIRPSWQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDADTANNFLLISDDLRSV 147
Query: 209 RSGRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRI 268
RSG I QNRQDLAERFDVS+CILGSPRFTCGRH WEVDVGTSTEWDLGVCRESVHRKGRI
Sbjct: 148 RSGCITQNRQDLAERFDVSICILGSPRFTCGRHYWEVDVGTSTEWDLGVCRESVHRKGRI 207
Query: 269 QLTTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHV 328
LTTE GFWTVSLRDG RLSA+TVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAE GSHV
Sbjct: 208 HLTTERGFWTVSLRDGSRLSASTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAEGGSHV 267
Query: 329 YTFRSVSAEEPLRPFLAPSVPPNGDQGVLSICPLMNSGTTDAPVRPGEAK 378
YTFRSVSAEEPL F AP PPNGD+ VLSICP++N GTTDAPV PGEAK
Sbjct: 268 YTFRSVSAEEPLHLFFAPPSPPNGDKSVLSICPVINPGTTDAPVHPGEAK 317
>gi|222446629 ret finger protein-like 4A [Homo sapiens]
Length = 287
Score = 325 bits (833), Expect = 4e-89
Identities = 158/282 (56%), Positives = 207/282 (73%)
Query: 91 MAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRKNK 150
MA F++ CPVC LE+ + L+CG A CL+C+NSLQKEP GE LLC S+VS+K+
Sbjct: 1 MAEHFKQIIRCPVCLKDLEEAVQLKCGYACCLQCLNSLQKEPDGEGLLCRFCSVVSQKDD 60
Query: 151 IRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSVRS 210
I+ +L L S IKELEPKLK +L MNPRMRKFQVDMT D +TANN+L+IS+DLRS RS
Sbjct: 61 IKPKYKLRALVSIIKELEPKLKSVLTMNPRMRKFQVDMTFDVDTANNYLIISEDLRSFRS 120
Query: 211 GRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQL 270
G + QNR++ AERFD ++C+LG+PRFT GRH WEVDVGTS WD+GVC+ESV+R+G+I L
Sbjct: 121 GDLSQNRKEQAERFDTALCVLGTPRFTSGRHYWEVDVGTSQVWDVGVCKESVNRQGKIVL 180
Query: 271 TTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYT 330
++E GF TV R+G +A+TVP+T L+V +L RVGIFLD+GM++++F++ G H+YT
Sbjct: 181 SSEHGFLTVGCREGKVFAASTVPMTPLWVSPQLHRVGIFLDVGMRSIAFYNVSDGCHIYT 240
Query: 331 FRSVSAEEPLRPFLAPSVPPNGDQGVLSICPLMNSGTTDAPV 372
F + EP RPF A DQ +LSIC ++N APV
Sbjct: 241 FIEIPVCEPWRPFFAHKRGSQDDQSILSICSVINPSAASAPV 282
>gi|5730009 ret finger protein [Homo sapiens]
Length = 513
Score = 150 bits (380), Expect = 1e-36
Identities = 81/205 (39%), Positives = 118/205 (57%), Gaps = 1/205 (0%)
Query: 158 ERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSVRSGRIRQNR 217
E L ++++ ++KI ++ + + VD+TLD +TA L++SD+LR VR ++Q+
Sbjct: 289 ESLKQFTEKMQSDMEKIQELR-EAQLYSVDVTLDPDTAYPSLILSDNLRQVRYSYLQQDL 347
Query: 218 QDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQLTTELGFW 277
D ERF++ C+LGSP F GRH WEV+VG +W +GVC +SV RKG + + GFW
Sbjct: 348 PDNPERFNLFPCVLGSPCFIAGRHYWEVEVGDKAKWTIGVCEDSVCRKGGVTSAPQNGFW 407
Query: 278 TVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAE 337
VSL G A T P+T L + LQRVGIFLD VSF++ H +TF +
Sbjct: 408 AVSLWYGKEYWALTSPMTALPLRTPLQRVGIFLDYDAGEVSFYNVTERCHTFTFSHATFC 467
Query: 338 EPLRPFLAPSVPPNGDQGVLSICPL 362
P+RP+ + S L ICP+
Sbjct: 468 GPVRPYFSLSYSGGKSAAPLIICPM 492
Score = 41.6 bits (96), Expect = 0.001
Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 91 MAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRKNK 150
+A Q+ ++CPVC Y +PM L+CG +C C+ C +++
Sbjct: 6 VAECLQQETTCPVCLQYFAEPMMLDCGHNICCACLARCWGTAETNVSCPQCRETFPQRH- 64
Query: 151 IRRNRQLERLASHIKEL 167
+R NR L + +K+L
Sbjct: 65 MRPNRHLANVTQLVKQL 81
>gi|5901908 butyrophilin, subfamily 3, member A3 isoform a [Homo
sapiens]
Length = 584
Score = 149 bits (377), Expect = 3e-36
Identities = 88/241 (36%), Positives = 128/241 (53%), Gaps = 27/241 (11%)
Query: 145 VSRKNKIRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQ------------------- 185
++ + R R+++ + E E L++ LQ + RK Q
Sbjct: 278 IALSRETEREREMKEMGYAATEQEISLREKLQEELKWRKIQYMARGEKSLAYHEWKMALF 337
Query: 186 --VDMTLDANTANNFLLISDDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCGRHCW 243
D+ LD +TAN LL+S+D RSV+ ++ D ERF+ C+LG FT GRH W
Sbjct: 338 KPADVILDPDTANAILLVSEDQRSVQRAEEPRDLPDNPERFEWRYCVLGCENFTSGRHYW 397
Query: 244 EVDVGTSTEWDLGVCRESVHR-KGRIQLTTELGFWTVSLRDGGRLSATTVPLTFLFVDRK 302
EV+VG EW +GVC ++V R KG +++T E G+WT+ L DG + A T P T L +
Sbjct: 398 EVEVGDRKEWHIGVCSKNVERKKGWVKMTPENGYWTMGLTDGNKYRALTEPRTNLKLPEP 457
Query: 303 LQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRP-FLAPSVPPNGDQGVLSICP 361
++VGIFLD +SF++A GSH+YTF S EPL P F ++ P L+ICP
Sbjct: 458 PRKVGIFLDYETGEISFYNATDGSHIYTFPHASFSEPLYPVFRILTLEPT----ALTICP 513
Query: 362 L 362
+
Sbjct: 514 I 514
>gi|37574628 butyrophilin, subfamily 3, member A3 isoform b [Homo
sapiens]
Length = 542
Score = 149 bits (377), Expect = 3e-36
Identities = 88/241 (36%), Positives = 128/241 (53%), Gaps = 27/241 (11%)
Query: 145 VSRKNKIRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQ------------------- 185
++ + R R+++ + E E L++ LQ + RK Q
Sbjct: 236 IALSRETEREREMKEMGYAATEQEISLREKLQEELKWRKIQYMARGEKSLAYHEWKMALF 295
Query: 186 --VDMTLDANTANNFLLISDDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCGRHCW 243
D+ LD +TAN LL+S+D RSV+ ++ D ERF+ C+LG FT GRH W
Sbjct: 296 KPADVILDPDTANAILLVSEDQRSVQRAEEPRDLPDNPERFEWRYCVLGCENFTSGRHYW 355
Query: 244 EVDVGTSTEWDLGVCRESVHR-KGRIQLTTELGFWTVSLRDGGRLSATTVPLTFLFVDRK 302
EV+VG EW +GVC ++V R KG +++T E G+WT+ L DG + A T P T L +
Sbjct: 356 EVEVGDRKEWHIGVCSKNVERKKGWVKMTPENGYWTMGLTDGNKYRALTEPRTNLKLPEP 415
Query: 303 LQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRP-FLAPSVPPNGDQGVLSICP 361
++VGIFLD +SF++A GSH+YTF S EPL P F ++ P L+ICP
Sbjct: 416 PRKVGIFLDYETGEISFYNATDGSHIYTFPHASFSEPLYPVFRILTLEPT----ALTICP 471
Query: 362 L 362
+
Sbjct: 472 I 472
>gi|153791360 ret finger protein-like 4B [Homo sapiens]
Length = 263
Score = 147 bits (370), Expect = 2e-35
Identities = 98/273 (35%), Positives = 143/273 (52%), Gaps = 12/273 (4%)
Query: 91 MAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLC-CCSSMVSRKN 149
MA Q SCPVC D+ +SL C C CI E H +C C +V K
Sbjct: 1 MAKRLQAELSCPVCLDFFSCSISLSCTHVFCFDCIQRYILENHDFRAMCPLCRDVV--KV 58
Query: 150 KIRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSVR 209
Q+ L K+ +L++ L + +R F+ D+TLDA TA++ L+ S+DLRS +
Sbjct: 59 PALEEWQVSVLTLMTKQHNSRLEQSLHVREELRHFREDVTLDAATASSLLVFSNDLRSAQ 118
Query: 210 SGRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQ 269
+I DL + ++ C+LG+P F+ G+H WEV+VG W LGVC+E RK
Sbjct: 119 CKKIHH---DLTKDPRLA-CVLGTPCFSSGQHYWEVEVGEVKSWSLGVCKEPADRKSN-D 173
Query: 270 LTTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVY 329
L E GFW +S++ G + A T L + +L+RVGIFLD ++ + FFD ++ +Y
Sbjct: 174 LFPEHGFW-ISMK-AGAIHANT-HLERIPASPRLRRVGIFLDADLEEIQFFDVDNNVLIY 230
Query: 330 TFRSVSAEEPLRPFLAPSVPPNGDQG-VLSICP 361
T + E L PF + G+ G VL+ICP
Sbjct: 231 THDGFFSLELLCPFFCLELLGEGESGNVLTICP 263
>gi|4557743 Mediterranean fever protein [Homo sapiens]
Length = 781
Score = 145 bits (367), Expect = 4e-35
Identities = 75/182 (41%), Positives = 107/182 (58%), Gaps = 1/182 (0%)
Query: 186 VDMTLDANTANNFLLISDDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEV 245
V++ LDA TA L+ SDDL+SVR G + D +RFD + +LGSP F GR WEV
Sbjct: 598 VNVILDAETAYPNLIFSDDLKSVRLGNKWERLPDGPQRFDSCIIVLGSPSFLSGRRYWEV 657
Query: 246 DVGTSTEWDLGVCRESVHRKGRIQLTTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQR 305
+VG T W LG C+ S+ RKG + L+ E G+W V + A++VP T L + +R
Sbjct: 658 EVGDKTAWILGACKTSISRKGNMTLSPENGYWVVIMMKENEYQASSVPPTRLLIKEPPKR 717
Query: 306 VGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSVPPNG-DQGVLSICPLMN 364
VGIF+D + ++SF++ + SH+YTF S S PL+P +P G + L+ICP+
Sbjct: 718 VGIFVDYRVGSISFYNVTARSHIYTFASCSFSGPLQPIFSPGTRDGGKNTAPLTICPVGG 777
Query: 365 SG 366
G
Sbjct: 778 QG 779
>gi|222418658 butyrophilin, subfamily 3, member A1 isoform c [Homo
sapiens]
Length = 461
Score = 145 bits (366), Expect = 6e-35
Identities = 76/176 (43%), Positives = 107/176 (60%), Gaps = 5/176 (2%)
Query: 187 DMTLDANTANNFLLISDDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVD 246
D+ LD TAN LL+S+D RSV+ + Q+ D ERF+ C+LG F GRH WEV+
Sbjct: 289 DVILDPKTANPILLVSEDQRSVQRAKEPQDLPDNPERFNWHYCVLGCESFISGRHYWEVE 348
Query: 247 VGTSTEWDLGVCRESVHRKGRIQLTTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRV 306
VG EW +GVC ++V RKG +++T E GFWT+ L DG + T P T L + + ++V
Sbjct: 349 VGDRKEWHIGVCSKNVQRKGWVKMTPENGFWTMGLTDGNKYRTLTEPRTNLKLPKPPKKV 408
Query: 307 GIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRP-FLAPSVPPNGDQGVLSICP 361
G+FLD ++SF++A GSH++TF VS E L P F ++ P L+ICP
Sbjct: 409 GVFLDYETGDISFYNAVDGSHIHTFLDVSFSEALYPVFRILTLEPT----ALTICP 460
>gi|37595558 butyrophilin, subfamily 3, member A1 isoform a [Homo
sapiens]
Length = 513
Score = 145 bits (366), Expect = 6e-35
Identities = 76/176 (43%), Positives = 107/176 (60%), Gaps = 5/176 (2%)
Query: 187 DMTLDANTANNFLLISDDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVD 246
D+ LD TAN LL+S+D RSV+ + Q+ D ERF+ C+LG F GRH WEV+
Sbjct: 341 DVILDPKTANPILLVSEDQRSVQRAKEPQDLPDNPERFNWHYCVLGCESFISGRHYWEVE 400
Query: 247 VGTSTEWDLGVCRESVHRKGRIQLTTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRV 306
VG EW +GVC ++V RKG +++T E GFWT+ L DG + T P T L + + ++V
Sbjct: 401 VGDRKEWHIGVCSKNVQRKGWVKMTPENGFWTMGLTDGNKYRTLTEPRTNLKLPKPPKKV 460
Query: 307 GIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRP-FLAPSVPPNGDQGVLSICP 361
G+FLD ++SF++A GSH++TF VS E L P F ++ P L+ICP
Sbjct: 461 GVFLDYETGDISFYNAVDGSHIHTFLDVSFSEALYPVFRILTLEPT----ALTICP 512
>gi|31542779 tripartite motif family-like 1 [Homo sapiens]
Length = 468
Score = 141 bits (356), Expect = 8e-34
Identities = 81/222 (36%), Positives = 122/222 (54%), Gaps = 2/222 (0%)
Query: 143 SMVSRKNKIRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLIS 202
S+ + + R+ L E L +I M +RKF ++TLD TAN +L++S
Sbjct: 243 SLEEVRGALERSEPLLLQCPEATTTELSLCRITGMKEMLRKFSTEITLDPATANAYLVLS 302
Query: 203 DDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESV 262
+DL+SV+ G RQ D ERFD S +LG+ FT GRH WEV+VG TEW++G+C++SV
Sbjct: 303 EDLKSVKYGGSRQQLPDNPERFDQSATVLGTQIFTSGRHYWEVEVGNKTEWEVGICKDSV 362
Query: 263 HRKGRIQLTTELGFWTVSLRDGGRLSA-TTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFD 321
RKG + F + L+ G S + PL V + +VG+FLD +++F++
Sbjct: 363 SRKGNLPKPPGDLFSLIGLKIGDDYSLWVSSPLKGQHVREPVCKVGVFLDYESGHIAFYN 422
Query: 322 AESGSHVYTFRSVSAEEPLRPFLAPSVPPNG-DQGVLSICPL 362
S +Y+F S +E LRP +P +P G + L+IC L
Sbjct: 423 GTDESLIYSFPQASFQEALRPIFSPCLPNEGTNTDPLTICSL 464
Score = 42.0 bits (97), Expect = 0.001
Identities = 24/82 (29%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
Query: 90 DMAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRKN 149
D+ +E +C +C DY P++ ECG + CL C+ +E H L C
Sbjct: 5 DLMENLREELTCFICLDYFSSPVTTECGHSFCLVCLLRSWEE-HNTPLSCPECWRTLEGP 63
Query: 150 KIRRNRQLERLASHIKELEPKL 171
+ N +L RLAS ++L ++
Sbjct: 64 HFQSNERLGRLASIARQLRSQV 85
>gi|15208660 tripartite motif protein 21 [Homo sapiens]
Length = 475
Score = 140 bits (354), Expect = 1e-33
Identities = 88/224 (39%), Positives = 129/224 (57%), Gaps = 11/224 (4%)
Query: 157 LERLAS-HIKELE---PKLKKILQ---MNPRMRKFQVDMTLDANTANNFLLISDDLRSVR 209
LER S ++K+L+ P+L+ + + +R V +TLD +TAN +L++S+D R VR
Sbjct: 251 LERSESWNLKDLDITSPELRSVCHVPGLKKMLRTCAVHITLDPDTANPWLILSEDRRQVR 310
Query: 210 SGRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQ 269
G +Q+ ERFD +LG+ F G+H WEVDV WDLGVCR+SV RKG
Sbjct: 311 LGDTQQSIPGNEERFDSYPMVLGAQHFHSGKHYWEVDVTGKEAWDLGVCRDSVRRKGHFL 370
Query: 270 LTTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFD-AESGSHV 328
L+++ GFWT+ L + + A T P T L + +VGIFLD VSF++ + GS +
Sbjct: 371 LSSKSGFWTIWLWNKQKYEAGTYPQTPLHLQVPPCQVGIFLDYEAGMVSFYNITDHGSLI 430
Query: 329 YTFRSVSAEEPLRPFLAPSVPPNG-DQGVLSICPLM--NSGTTD 369
Y+F + PLRPF +P G + L++CPL + G+TD
Sbjct: 431 YSFSECAFTGPLRPFFSPGFNDGGKNTAPLTLCPLNIGSQGSTD 474
Score = 50.8 bits (120), Expect = 2e-06
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 84 ASSRRVDMAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSS 143
AS+ R+ M E +CP+C D +P+S+ECG + C +CI+ + K G + C
Sbjct: 2 ASAARLTM---MWEEVTCPICLDPFVEPVSIECGHSFCQECISQVGK--GGGSVCPVCRQ 56
Query: 144 MVSRKNKIRRNRQLERLASHIKELEPKLKK 173
KN +R NRQL + +++KE+ + ++
Sbjct: 57 RFLLKN-LRPNRQLANMVNNLKEISQEARE 85
>gi|166197658 butyrophilin, subfamily 1, member A1 [Homo sapiens]
Length = 526
Score = 134 bits (338), Expect = 1e-31
Identities = 76/177 (42%), Positives = 105/177 (59%), Gaps = 4/177 (2%)
Query: 186 VDMTLDANTANNFLLISDDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEV 245
VD+TLD +TA+ L + +D +SVR RQ + ERFD C+LG FT GRH WEV
Sbjct: 303 VDVTLDPDTAHPHLFLYEDSKSVRLEDSRQKLPEKTERFDSWPCVLGRETFTSGRHYWEV 362
Query: 246 DVGTSTEWDLGVCRESVHRKGRIQLTTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQR 305
+VG T+W +GVCRE+V +KG +T E GFW V L G + T + T L + +R
Sbjct: 363 EVGDRTDWAIGVCRENVMKKGFDPMTPENGFWAVELYGNGYWALTPL-RTPLPLAGPPRR 421
Query: 306 VGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSVPPNGDQGVLSICPL 362
VGIFLD ++SF++ GS +YTF +V+ PLRPF + + L+ICP+
Sbjct: 422 VGIFLDYESGDISFYNMNDGSDIYTFSNVTFSGPLRPFFCLW---SSGKKPLTICPI 475
>gi|31881693 butyrophilin, subfamily 2, member A2 isoform b [Homo
sapiens]
Length = 407
Score = 134 bits (338), Expect = 1e-31
Identities = 81/228 (35%), Positives = 117/228 (51%), Gaps = 8/228 (3%)
Query: 140 CCSSMVSRKNKIRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFL 199
CC + R+ KI + ++ KE+ +L++ L+ R D+ LD +TA+ L
Sbjct: 168 CCIKKLQREKKILSGEK--KVEQEEKEIAQQLQEELRWR-RTFLHAADVVLDPDTAHPEL 224
Query: 200 LISDDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCR 259
+S+D RSVR G RQ D ERFD C+LG F G+H WEV+V W +GVCR
Sbjct: 225 FLSEDRRSVRRGPYRQRVPDNPERFDSQPCVLGWESFASGKHYWEVEVENVMVWTVGVCR 284
Query: 260 ESVHRKGRIQLTTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSF 319
SV RKG + L + GFWT+ + G + A + P L + L RVG+FLD +VSF
Sbjct: 285 HSVERKGEVLLIPQNGFWTLEM-FGNQYRALSSPERILPLKESLCRVGVFLDYEAGDVSF 343
Query: 320 FDAESGSHVYTFRSVSAEEPLRPFLAPSVPPNGDQGVLSICPLMNSGT 367
++ SH+YT + P+RPF D + ICP + +
Sbjct: 344 YNMRDRSHIYTCPRSAFTVPVRPFFR----LGSDDSPIFICPALTGAS 387
>gi|6453813 butyrophilin, subfamily 2, member A2 isoform a [Homo
sapiens]
Length = 523
Score = 134 bits (338), Expect = 1e-31
Identities = 81/228 (35%), Positives = 117/228 (51%), Gaps = 8/228 (3%)
Query: 140 CCSSMVSRKNKIRRNRQLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFL 199
CC + R+ KI + ++ KE+ +L++ L+ R D+ LD +TA+ L
Sbjct: 284 CCIKKLQREKKILSGEK--KVEQEEKEIAQQLQEELRWR-RTFLHAADVVLDPDTAHPEL 340
Query: 200 LISDDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCR 259
+S+D RSVR G RQ D ERFD C+LG F G+H WEV+V W +GVCR
Sbjct: 341 FLSEDRRSVRRGPYRQRVPDNPERFDSQPCVLGWESFASGKHYWEVEVENVMVWTVGVCR 400
Query: 260 ESVHRKGRIQLTTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSF 319
SV RKG + L + GFWT+ + G + A + P L + L RVG+FLD +VSF
Sbjct: 401 HSVERKGEVLLIPQNGFWTLEM-FGNQYRALSSPERILPLKESLCRVGVFLDYEAGDVSF 459
Query: 320 FDAESGSHVYTFRSVSAEEPLRPFLAPSVPPNGDQGVLSICPLMNSGT 367
++ SH+YT + P+RPF D + ICP + +
Sbjct: 460 YNMRDRSHIYTCPRSAFTVPVRPFFR----LGSDDSPIFICPALTGAS 503
>gi|5921461 butyrophilin, subfamily 2, member A1 isoform 1 precursor
[Homo sapiens]
Length = 527
Score = 134 bits (337), Expect = 1e-31
Identities = 90/251 (35%), Positives = 130/251 (51%), Gaps = 16/251 (6%)
Query: 119 AVCLKCINSLQKEPHGEDLLCCCSSMVSRKNKIRRNRQLERLASHIKELEPKLKKILQMN 178
AVC+ IN LQKE + R+ + ++LE+ KE E ++K+ LQ
Sbjct: 263 AVCIYWINKLQKEKK----ILSGEKEFERETREIALKELEKERVQ-KEEELQVKEKLQEE 317
Query: 179 PRMRK---FQVDMTLDANTANNFLLISDDLRSVRSGRIR---QNRQDLAERFDVSVCILG 232
R R+ VD+ LD +TA+ L +S+D RSVR R ++ D ERFD C+LG
Sbjct: 318 LRWRRTFLHAVDVVLDPDTAHPDLFLSEDRRSVRRCPFRHLGESVPDNPERFDSQPCVLG 377
Query: 233 SPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQLTTELGFWTVSLRDGGRLSATTV 292
F G+H WEV+V EW +GVCR+SV RKG + L + GFWT+ + G+ A +
Sbjct: 378 RESFASGKHYWEVEVENVIEWTVGVCRDSVERKGEVLLIPQNGFWTLEMHK-GQYRAVSS 436
Query: 293 PLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSVPPNG 352
P L + L RVG+FLD +VSF++ SH+YT + P+RPF
Sbjct: 437 PDRILPLKESLCRVGVFLDYEAGDVSFYNMRDRSHIYTCPRSAFSVPVRPFFRLGC---- 492
Query: 353 DQGVLSICPLM 363
+ + ICP +
Sbjct: 493 EDSPIFICPAL 503
>gi|21630277 tripartite motif-containing 11 [Homo sapiens]
Length = 468
Score = 132 bits (333), Expect = 4e-31
Identities = 80/192 (41%), Positives = 112/192 (58%), Gaps = 7/192 (3%)
Query: 181 MRKFQVDMTLDANTANNFLLISDDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCGR 240
+R+F+ D+TLD +TAN L++S+D RSV+ G +RQ D ERFD C+LG RFT GR
Sbjct: 282 LRRFRGDVTLDPDTANPELILSEDRRSVQRGDLRQALPDSPERFDPGPCVLGQERFTSGR 341
Query: 241 HCWEVDVGTSTEWDLGVCRESVHRKGRIQLTTELGFWTVSLRDGGRLSATTVPLTFLFVD 300
H WEV+VG T W LGVCRE+V+RK + +L+ GFW + G +++ L L
Sbjct: 342 HYWEVEVGDRTSWALGVCRENVNRKEKGELSAGNGFWILVFL-GSYYNSSERALAPL--R 398
Query: 301 RKLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSVPPNGDQGVLSIC 360
+RVGIFLD ++SF+ A GS ++ F + LRP +P + ++IC
Sbjct: 399 DPPRRVGIFLDYEAGHLSFYSATDGSLLFIFPEIPFSGTLRPLFSPL---SSSPTPMTIC 455
Query: 361 -PLMNSGTTDAP 371
P SG T AP
Sbjct: 456 RPKGGSGDTLAP 467
Score = 50.8 bits (120), Expect = 2e-06
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 1/80 (1%)
Query: 90 DMAALFQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRKN 149
D++ QE ++C +C DY P+ +CG C +CI +P G C + ++N
Sbjct: 5 DLSTNLQEEATCAICLDYFTDPVMTDCGHNFCRECIRRCWGQPEGPYACPECRELSPQRN 64
Query: 150 KIRRNRQLERLASHIKELEP 169
+R NR L ++A + L P
Sbjct: 65 -LRPNRPLAKMAEMARRLHP 83
>gi|25777698 tripartite motif-containing 39 isoform 2 [Homo sapiens]
Length = 488
Score = 131 bits (330), Expect = 9e-31
Identities = 76/194 (39%), Positives = 109/194 (56%), Gaps = 8/194 (4%)
Query: 156 QLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSVRSGRIR- 214
+LE+ S+ L+KIL ++ D+TLD TA+ L++S+D +SV+ R
Sbjct: 283 ELEKNFSNFPRQYFALRKIL------KQLIADVTLDPETAHPNLVLSEDRKSVKFVETRL 336
Query: 215 QNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQLTTEL 274
++ D RF C+L + FT GRH WEV+VG T W +GVCR+SV RKG + E
Sbjct: 337 RDLPDTPRRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVCRDSVSRKGELTPLPET 396
Query: 275 GFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSV 334
G+W V L +G + +ATT P T L + K +RVGIFLD +SF++ SH+YTF
Sbjct: 397 GYWRVRLWNGDKYAATTTPFTPLHIKVKPKRVGIFLDYEAGTLSFYNVTDRSHIYTFTDT 456
Query: 335 SAEEPLRPFLAPSV 348
E+ L P P +
Sbjct: 457 FTEK-LWPLFYPGI 469
Score = 49.7 bits (117), Expect = 4e-06
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 79 LEDRGASSRRVDMAAL--FQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGED 136
L + GAS+ AAL Q +SC VC +YL++P+ +ECG C CI ++ D
Sbjct: 6 LLEAGASAAST-AAALENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLE-RD 63
Query: 137 LLCCCSSMVSRKNKIRRNRQLERLASHIKELEPKLKKI 174
C SR +R NRQL + K+L+ +KI
Sbjct: 64 FPCPVCRKTSRYRSLRPNRQLGSMVEIAKQLQAVKRKI 101
>gi|25777696 tripartite motif-containing 39 isoform 1 [Homo sapiens]
Length = 518
Score = 131 bits (330), Expect = 9e-31
Identities = 76/194 (39%), Positives = 109/194 (56%), Gaps = 8/194 (4%)
Query: 156 QLERLASHIKELEPKLKKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSVRSGRIR- 214
+LE+ S+ L+KIL ++ D+TLD TA+ L++S+D +SV+ R
Sbjct: 313 ELEKNFSNFPRQYFALRKIL------KQLIADVTLDPETAHPNLVLSEDRKSVKFVETRL 366
Query: 215 QNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQLTTEL 274
++ D RF C+L + FT GRH WEV+VG T W +GVCR+SV RKG + E
Sbjct: 367 RDLPDTPRRFTFYPCVLATEGFTSGRHYWEVEVGDKTHWAVGVCRDSVSRKGELTPLPET 426
Query: 275 GFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSV 334
G+W V L +G + +ATT P T L + K +RVGIFLD +SF++ SH+YTF
Sbjct: 427 GYWRVRLWNGDKYAATTTPFTPLHIKVKPKRVGIFLDYEAGTLSFYNVTDRSHIYTFTDT 486
Query: 335 SAEEPLRPFLAPSV 348
E+ L P P +
Sbjct: 487 FTEK-LWPLFYPGI 499
Score = 49.7 bits (117), Expect = 4e-06
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 79 LEDRGASSRRVDMAAL--FQEASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGED 136
L + GAS+ AAL Q +SC VC +YL++P+ +ECG C CI ++ D
Sbjct: 6 LLEAGASAAST-AAALENLQVEASCSVCLEYLKEPVIIECGHNFCKACITRWWEDLE-RD 63
Query: 137 LLCCCSSMVSRKNKIRRNRQLERLASHIKELEPKLKKI 174
C SR +R NRQL + K+L+ +KI
Sbjct: 64 FPCPVCRKTSRYRSLRPNRQLGSMVEIAKQLQAVKRKI 101
>gi|63054855 erythroblast membrane-associated protein precursor
[Homo sapiens]
Length = 475
Score = 126 bits (317), Expect = 3e-29
Identities = 84/221 (38%), Positives = 116/221 (52%), Gaps = 6/221 (2%)
Query: 159 RLASHIKELEPKLK-KILQMNPRMRKFQ---VDMTLDANTANNFLLISDDLRSVRSGRIR 214
+L +K+L +LK K N R+ + V +TLD +TA+ L++S+D R VR G R
Sbjct: 207 KLHKAVKKLRSELKLKRAAANSGWRRARLHFVAVTLDPDTAHPKLILSEDQRCVRLGDRR 266
Query: 215 QNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQLTTEL 274
Q D +RFD V ILGS FT G H WEV VG T+W LGVC ESV RKG++ +
Sbjct: 267 QPVPDNPQRFDFVVSILGSEYFTTGCHYWEVYVGDKTKWILGVCSESVSRKGKVTASPAN 326
Query: 275 GFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSV 334
G W + G A T P T + + VGIFLD +SF++ + SH++TF +
Sbjct: 327 GHWLLRQSRGNEYEALTSPQTSFRLKEPPRCVGIFLDYEAGVISFYNVTNKSHIFTF-TH 385
Query: 335 SAEEPLRPFLAPSVPPNG-DQGVLSICPLMNSGTTDAPVRP 374
+ PLRPF P + G + L IC ++ RP
Sbjct: 386 NFSGPLRPFFEPCLHDGGKNTAPLVICSELHKSEESIVPRP 426
>gi|19923536 erythroblast membrane-associated protein precursor
[Homo sapiens]
Length = 475
Score = 126 bits (317), Expect = 3e-29
Identities = 84/221 (38%), Positives = 116/221 (52%), Gaps = 6/221 (2%)
Query: 159 RLASHIKELEPKLK-KILQMNPRMRKFQ---VDMTLDANTANNFLLISDDLRSVRSGRIR 214
+L +K+L +LK K N R+ + V +TLD +TA+ L++S+D R VR G R
Sbjct: 207 KLHKAVKKLRSELKLKRAAANSGWRRARLHFVAVTLDPDTAHPKLILSEDQRCVRLGDRR 266
Query: 215 QNRQDLAERFDVSVCILGSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQLTTEL 274
Q D +RFD V ILGS FT G H WEV VG T+W LGVC ESV RKG++ +
Sbjct: 267 QPVPDNPQRFDFVVSILGSEYFTTGCHYWEVYVGDKTKWILGVCSESVSRKGKVTASPAN 326
Query: 275 GFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSV 334
G W + G A T P T + + VGIFLD +SF++ + SH++TF +
Sbjct: 327 GHWLLRQSRGNEYEALTSPQTSFRLKEPPRCVGIFLDYEAGVISFYNVTNKSHIFTF-TH 385
Query: 335 SAEEPLRPFLAPSVPPNG-DQGVLSICPLMNSGTTDAPVRP 374
+ PLRPF P + G + L IC ++ RP
Sbjct: 386 NFSGPLRPFFEPCLHDGGKNTAPLVICSELHKSEESIVPRP 426
>gi|5454014 tripartite motif-containing 38 [Homo sapiens]
Length = 465
Score = 125 bits (315), Expect = 5e-29
Identities = 71/188 (37%), Positives = 101/188 (53%), Gaps = 6/188 (3%)
Query: 172 KKILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSVRSGRIRQNRQDLAERFDVSVCIL 231
K + +R QV +TLD +TA++ L++S+D R V G ++N+ + RF C+L
Sbjct: 278 KLYFDVKKMLRSHQVSVTLDPDTAHHELILSEDRRQVTRGYTQENQDTSSRRFTAFPCVL 337
Query: 232 GSPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQLTTELGFWTVSLRDGGRLSATT 291
G FT GR +EVDVG T WDLGVC E+V R ++ + GFWT+ L A T
Sbjct: 338 GCEGFTSGRRYFEVDVGEGTGWDLGVCMENVQRGTGMKQEPQSGFWTLRLCKKKGYVALT 397
Query: 292 VPLTFLFVDRKLQRVGIFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAP----- 346
P T L + + VGIFLD VSF++ +G H++TF S + LRP+
Sbjct: 398 SPPTSLHLHEQPLLVGIFLDYEAGVVSFYNGNTGCHIFTFPKASFSDTLRPYFQVYQYSP 457
Query: 347 -SVPPNGD 353
+PP GD
Sbjct: 458 LFLPPPGD 465
Score = 42.4 bits (98), Expect = 7e-04
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 97 EASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDL----LCCCSSMVS-RKNKI 151
E ++C +C + P+S+ CG + C CI K P + L CC + +
Sbjct: 12 EEATCSICLSLMTNPVSINCGHSYCHLCITDFFKNPSQKQLRQETFCCPQCRAPFHMDSL 71
Query: 152 RRNRQLERLASHIKELEPKL 171
R N+QL L +KE + ++
Sbjct: 72 RPNKQLGSLIEALKETDQEM 91
>gi|37595541 tripartite motif-containing 69 isoform b [Homo sapiens]
Length = 341
Score = 122 bits (307), Expect = 4e-28
Identities = 68/166 (40%), Positives = 98/166 (59%), Gaps = 1/166 (0%)
Query: 188 MTLDANTANNFLLISDDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDV 247
+TLD TA+ L++S SV G I++ D ERFD SV +LGS FT G+ WEV+V
Sbjct: 166 LTLDPKTAHPNLVLSKSQTSVWHGDIKKIMPDDPERFDSSVAVLGSRGFTSGKWYWEVEV 225
Query: 248 GTSTEWDLGVCRESVHRKGRIQLTTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVG 307
T+W +GV RES+ RKG LT E GFW + LR+ L A +P L + L +VG
Sbjct: 226 AKKTKWTVGVVRESIIRKGSCPLTPEQGFWLLRLRNQTDLKALDLPSFSLTLTNNLDKVG 285
Query: 308 IFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSVPPNGD 353
I+LD +SF++A++ +H+YTF + E+ L P+ P + G+
Sbjct: 286 IYLDYEGGQLSFYNAKTMTHIYTFSNTFMEK-LYPYFCPCLNDGGE 330
>gi|88999601 tripartite motif-containing 69 isoform a [Homo sapiens]
Length = 500
Score = 122 bits (307), Expect = 4e-28
Identities = 68/166 (40%), Positives = 98/166 (59%), Gaps = 1/166 (0%)
Query: 188 MTLDANTANNFLLISDDLRSVRSGRIRQNRQDLAERFDVSVCILGSPRFTCGRHCWEVDV 247
+TLD TA+ L++S SV G I++ D ERFD SV +LGS FT G+ WEV+V
Sbjct: 325 LTLDPKTAHPNLVLSKSQTSVWHGDIKKIMPDDPERFDSSVAVLGSRGFTSGKWYWEVEV 384
Query: 248 GTSTEWDLGVCRESVHRKGRIQLTTELGFWTVSLRDGGRLSATTVPLTFLFVDRKLQRVG 307
T+W +GV RES+ RKG LT E GFW + LR+ L A +P L + L +VG
Sbjct: 385 AKKTKWTVGVVRESIIRKGSCPLTPEQGFWLLRLRNQTDLKALDLPSFSLTLTNNLDKVG 444
Query: 308 IFLDMGMQNVSFFDAESGSHVYTFRSVSAEEPLRPFLAPSVPPNGD 353
I+LD +SF++A++ +H+YTF + E+ L P+ P + G+
Sbjct: 445 IYLDYEGGQLSFYNAKTMTHIYTFSNTFMEK-LYPYFCPCLNDGGE 489
Score = 42.0 bits (97), Expect = 0.001
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 14/116 (12%)
Query: 101 CPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGEDLLCCCSSMVSRKNKIRRNRQLERL 160
CP+C+D+ P+ L CG C CI + ++ C M+ + N N L++L
Sbjct: 41 CPLCNDWFRDPLMLSCGHNFCEACIQDFWR-LQAKETFCPECKMLCQYNNCTFNPVLDKL 99
Query: 161 ASHIKELE------------PKLKKILQMNPRMRKFQV-DMTLDANTANNFLLISD 203
IK+L LK + + ++ FQ D L + FL ISD
Sbjct: 100 VEKIKKLPLLKGHPQCPEHGENLKLFSKPDGKLICFQCKDARLSVGQSKEFLQISD 155
>gi|37622899 ring finger protein 137 [Homo sapiens]
Length = 485
Score = 119 bits (297), Expect = 6e-27
Identities = 68/193 (35%), Positives = 106/193 (54%), Gaps = 4/193 (2%)
Query: 173 KILQMNPRMRKFQVDMTLDANTANNFLLISDDLRSVRSGRIRQNRQDLAERFDVSVCILG 232
++L + ++ + D+ LD +TA + L++S+D + V G Q D ERF +LG
Sbjct: 290 RVLGLREILKTYAADVRLDPDTAYSRLIVSEDRKRVHYGDTNQKLPDNPERFYRYNIVLG 349
Query: 233 SPRFTCGRHCWEVDVGTSTEWDLGVCRESVHRKGRIQLTTELGFWTVSLRDGGRLSATTV 292
S + GRH WEV+VG +EW LGVC+++V RK + L+ GFW + LR G A T
Sbjct: 350 SQCISSGRHYWEVEVGDRSEWGLGVCKQNVDRKEVVYLSPHYGFWVIRLRKGNEYRAGTD 409
Query: 293 PLTFLFVDRKLQRVGIFLDMGMQNVSFFD-AESGSHVYTFRSVSAEEPLRPFLAP--SVP 349
L + +RVGIF+D ++SF++ + GSH++TF L P+ +P S+
Sbjct: 410 EYPILSLPVPPRRVGIFVDYEAHDISFYNVTDCGSHIFTFPRYPFPGRLLPYFSPCYSIG 469
Query: 350 PNGDQGVLSICPL 362
N + L+IC L
Sbjct: 470 TN-NTAPLAICSL 481
Score = 42.7 bits (99), Expect = 5e-04
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 97 EASSCPVCSDYLEKPMSLECGCAVCLKCINSLQKEPHGED----LLC-CCSSMVSRKNKI 151
E +CP+C +L +PMS++CG + C C++ L + P GE C C + V +N +
Sbjct: 12 EEVACPICMTFLREPMSIDCGHSFCHSCLSGLWEIP-GESQNWGYTCPLCRAPVQPRN-L 69
Query: 152 RRNRQLERLASHIKEL 167
R N QL + ++ L
Sbjct: 70 RPNWQLANVVEKVRLL 85
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.136 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,686,342
Number of Sequences: 37866
Number of extensions: 653707
Number of successful extensions: 2287
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 170
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 1878
Number of HSP's gapped (non-prelim): 285
length of query: 378
length of database: 18,247,518
effective HSP length: 104
effective length of query: 274
effective length of database: 14,309,454
effective search space: 3920790396
effective search space used: 3920790396
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.