Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: MTMR15 Sequence: fasta or formatted (1017aa) NCBI GI: 226246523
Description:

myotubularin related protein 15 isoform a

Not currently referenced in the text

Other entries for this name:
alt prot {533aa} myotubularin related protein 15 isoform b
alt prot {533aa} myotubularin related protein 15 isoform b
alt prot {533aa} myotubularin related protein 15 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         69           3
 C cysteine            3.1         32           1
 D aspartate           5.5         56           2
 E glutamate           7.5         76           2
 F phenylalanine       3.4         35           2
 G glycine             4.7         48           2
 H histidine           2.6         26           1
 I isoleucine          4.2         43           2
 K lysine              7.1         72           3
 L leucine            11.1        113           3
 M methionine          2.1         21           2
 N asparagine          3.6         37           2
 P proline             4.4         45           3
 Q glutamine           4.8         49           2
 R arginine            5.8         59           2
 S serine              9.4         96           2
 T threonine           4.2         43           2
 V valine              6.6         67           2
 W tryptophan          1.4         14           2
 Y tyrosine            1.6         16           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myotubularin related protein 15 isoform a 
MTMR15                0.504   myotubularin related protein 15 isoform b 
MTMR15                0.504   myotubularin related protein 15 isoform b 
MTMR15                0.504   myotubularin related protein 15 isoform b 
FAM133B               0.007   hypothetical protein LOC257415 isoform 2 
FAM133B               0.007   hypothetical protein LOC257415 isoform 1 
ARHGAP11A             0.006   Rho GTPase activating protein 11A isoform 1 
SART1                 0.005   squamous cell carcinoma antigen recognized by T cell...
CXorf21               0.005   hypothetical protein LOC80231 
EDN1                  0.005   endothelin 1 
ANKRD12               0.005   ankyrin repeat domain 12 isoform 2 
ANKRD12               0.005   ankyrin repeat domain 12 isoform 1 
FAM161A               0.005   hypothetical protein LOC84140 
EIF3G                 0.004   eukaryotic translation initiation factor 3, subunit ...
TOP2B                 0.004   DNA topoisomerase II, beta isozyme 
F11                   0.004   coagulation factor XI precursor 
MLLT3                 0.004   myeloid/lymphoid or mixed-lineage leukemia (trithor...
SETD1B                0.004   SET domain containing 1B 
PPIG                  0.004   peptidylprolyl isomerase G 
ODF2L                 0.004   outer dense fiber of sperm tails 2-like isoform b [H...
ODF2L                 0.004   outer dense fiber of sperm tails 2-like isoform a [H...
UTP18                 0.004   UTP18, small subunit processome component 
RAI14                 0.004   retinoic acid induced 14 isoform d 
RAI14                 0.004   retinoic acid induced 14 isoform c 
RAI14                 0.004   retinoic acid induced 14 isoform b 
RAI14                 0.004   retinoic acid induced 14 isoform a 
RAI14                 0.004   retinoic acid induced 14 isoform a 
RAI14                 0.004   retinoic acid induced 14 isoform a 
MYH13                 0.004   myosin, heavy polypeptide 13, skeletal muscle [Homo...
XAF1                  0.004   XIAP associated factor 1 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press