Guide to the Human Genome
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Name: MTMR15 Sequence: fasta or formatted (533aa) NCBI GI: 226246525
Description:

myotubularin related protein 15 isoform b

Not currently referenced in the text

Other entries for this name:
alt prot {1017aa} myotubularin related protein 15 isoform a
alt mRNA {533aa} myotubularin related protein 15 isoform b
alt mRNA {533aa} myotubularin related protein 15 isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         29           1
 C cysteine            3.0         16           1
 D aspartate           5.6         30           2
 E glutamate           8.4         45           2
 F phenylalanine       3.0         16           1
 G glycine             3.6         19           1
 H histidine           1.3          7           1
 I isoleucine          4.5         24           2
 K lysine             10.1         54           3
 L leucine            10.1         54           3
 M methionine          2.1         11           2
 N asparagine          5.1         27           2
 P proline             5.1         27           3
 Q glutamine           4.9         26           2
 R arginine            3.4         18           2
 S serine             11.3         60           2
 T threonine           4.3         23           2
 V valine              6.6         35           2
 W tryptophan          0.8          4           1
 Y tyrosine            1.5          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myotubularin related protein 15 isoform b 
MTMR15                1.000   myotubularin related protein 15 isoform b 
MTMR15                1.000   myotubularin related protein 15 isoform b 
MTMR15                0.984   myotubularin related protein 15 isoform a 
FAM133B               0.014   hypothetical protein LOC257415 isoform 2 
FAM133B               0.014   hypothetical protein LOC257415 isoform 1 
ARHGAP11A             0.012   Rho GTPase activating protein 11A isoform 1 
SART1                 0.011   squamous cell carcinoma antigen recognized by T cell...
EDN1                  0.010   endothelin 1 
ANKRD12               0.010   ankyrin repeat domain 12 isoform 2 
ANKRD12               0.010   ankyrin repeat domain 12 isoform 1 
EIF3G                 0.009   eukaryotic translation initiation factor 3, subunit ...
MLLT3                 0.009   myeloid/lymphoid or mixed-lineage leukemia (trithor...
SETD1B                0.009   SET domain containing 1B 
PPIG                  0.008   peptidylprolyl isomerase G 
ODF2L                 0.008   outer dense fiber of sperm tails 2-like isoform b [H...
ODF2L                 0.008   outer dense fiber of sperm tails 2-like isoform a [H...
UTP18                 0.008   UTP18, small subunit processome component 
RAI14                 0.008   retinoic acid induced 14 isoform d 
RAI14                 0.008   retinoic acid induced 14 isoform c 
RAI14                 0.008   retinoic acid induced 14 isoform b 
RAI14                 0.008   retinoic acid induced 14 isoform a 
RAI14                 0.008   retinoic acid induced 14 isoform a 
RAI14                 0.008   retinoic acid induced 14 isoform a 
MYH13                 0.008   myosin, heavy polypeptide 13, skeletal muscle [Homo...
XAF1                  0.008   XIAP associated factor 1 isoform 2 
XAF1                  0.008   XIAP associated factor 1 isoform 1 
SDCCAG1               0.008   serologically defined colon cancer antigen 1 
FAM21B                0.008   hypothetical protein LOC55747 
ANKRD30B              0.007   ankyrin repeat domain 30B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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