PAX8 35982

Name: PAX8	Sequence: fasta or formatted (287aa)		NCBI GI: 7669542
Description: paired box 8 isoform PAX8E		Referenced in: Homeobox and Related Proteins
Other entries for this name: alt prot [450aa] paired box 8 isoform PAX8A alt prot [387aa] paired box 8 isoform PAX8B alt prot [398aa] paired box 8 isoform PAX8C alt prot [321aa] paired box 8 isoform PAX8D
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.6 16 1 C cysteine 2.4 7 1 D aspartate 5.2 15 2 E glutamate 4.2 12 1 F phenylalanine 1.7 5 1 G glycine 8.0 23 2 H histidine 3.5 10 2 I isoleucine 5.2 15 2 K lysine 4.2 12 1 L leucine 6.6 19 2 M methionine 2.1 6 1 N asparagine 3.1 9 1 P proline 10.5 30 2 Q glutamine 4.9 14 2 R arginine 7.0 20 1 S serine 11.5 33 4 T threonine 5.6 16 1 V valine 6.3 18 2 W tryptophan 0.3 1 1 Y tyrosine 2.1 6 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 paired box 8 isoform PAX8E PAX8 0.970 paired box 8 isoform PAX8D PAX8 0.897 paired box 8 isoform PAX8C PAX8 0.897 paired box 8 isoform PAX8B PAX8 0.897 paired box 8 isoform PAX8A PAX2 0.581 paired box protein 2 isoform d PAX2 0.581 paired box protein 2 isoform b PAX2 0.581 paired box protein 2 isoform c PAX2 0.563 paired box protein 2 isoform a PAX2 0.563 paired box protein 2 isoform e PAX5 0.540 paired box 5 PAX6 0.349 paired box gene 6 isoform a PAX6 0.349 paired box gene 6 isoform a PAX6 0.333 paired box gene 6 isoform b PAX3 0.331 paired box 3 isoform PAX3i PAX3 0.322 paired box 3 isoform PAX3g PAX3 0.322 paired box 3 isoform PAX3h PAX3 0.322 paired box 3 isoform PAX3e PAX3 0.322 paired box 3 isoform PAX3d PAX3 0.322 paired box 3 isoform PAX3 PAX7 0.319 paired box 7 isoform 2 PAX7 0.310 paired box 7 isoform 1 PAX7 0.310 paired box 7 isoform 3 PAX1 0.299 paired box 1 PAX9 0.299 paired box 9 PAX3 0.294 paired box 3 isoform PAX3b PAX3 0.294 paired box 3 isoform PAX3a PAX4 0.246 paired box 4 ALX4 0.028 aristaless-like homeobox 4 SRRM1 0.025 serine/arginine repetitive matrix 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.