PAX8 35524

Name: PAX8	Sequence: fasta or formatted (321aa)		NCBI GI: 7524365
Description: paired box 8 isoform PAX8D		Referenced in: Homeobox and Related Proteins
Other entries for this name: alt prot [450aa] paired box 8 isoform PAX8A alt prot [387aa] paired box 8 isoform PAX8B alt prot [398aa] paired box 8 isoform PAX8C alt prot [287aa] paired box 8 isoform PAX8E
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.2 20 2 C cysteine 2.5 8 1 D aspartate 5.3 17 2 E glutamate 4.0 13 1 F phenylalanine 1.6 5 1 G glycine 7.8 25 2 H histidine 3.4 11 2 I isoleucine 4.7 15 2 K lysine 3.7 12 1 L leucine 6.2 20 2 M methionine 2.2 7 1 N asparagine 2.8 9 1 P proline 11.8 38 2 Q glutamine 5.0 16 2 R arginine 7.2 23 1 S serine 10.9 35 4 T threonine 5.6 18 1 V valine 5.6 18 2 W tryptophan 1.6 5 2 Y tyrosine 1.9 6 2			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 paired box 8 isoform PAX8D PAX8 0.846 paired box 8 isoform PAX8E PAX8 0.815 paired box 8 isoform PAX8C PAX8 0.784 paired box 8 isoform PAX8B PAX8 0.784 paired box 8 isoform PAX8A PAX2 0.509 paired box protein 2 isoform d PAX2 0.509 paired box protein 2 isoform b PAX2 0.509 paired box protein 2 isoform c PAX2 0.494 paired box protein 2 isoform a PAX2 0.494 paired box protein 2 isoform e PAX5 0.461 paired box 5 PAX6 0.304 paired box gene 6 isoform a PAX6 0.304 paired box gene 6 isoform a PAX6 0.290 paired box gene 6 isoform b PAX3 0.289 paired box 3 isoform PAX3i PAX3 0.281 paired box 3 isoform PAX3g PAX3 0.281 paired box 3 isoform PAX3h PAX3 0.281 paired box 3 isoform PAX3e PAX3 0.281 paired box 3 isoform PAX3d PAX3 0.281 paired box 3 isoform PAX3 PAX7 0.278 paired box 7 isoform 2 PAX7 0.270 paired box 7 isoform 1 PAX7 0.270 paired box 7 isoform 3 PAX1 0.261 paired box 1 PAX9 0.261 paired box 9 PAX3 0.256 paired box 3 isoform PAX3b PAX3 0.256 paired box 3 isoform PAX3a PAX4 0.215 paired box 4 ALX4 0.025 aristaless-like homeobox 4 SRRM1 0.022 serine/arginine repetitive matrix 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.