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Search of human proteins with 115430223
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|115430223 galectin 3 [Homo sapiens]
(250 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|115430223 galectin 3 [Homo sapiens] 534 e-152
gi|6806890 galectin-9 isoform long [Homo sapiens] 118 4e-27
gi|102469694 galectin-9 isoform short [Homo sapiens] 116 2e-26
gi|111494237 galectin-9 like [Homo sapiens] 115 3e-26
gi|111494239 galectin 9 like [Homo sapiens] 113 2e-25
gi|42544193 galectin-8 isoform a [Homo sapiens] 98 8e-21
gi|42544191 galectin-8 isoform b [Homo sapiens] 98 8e-21
gi|42544187 galectin-8 isoform b [Homo sapiens] 98 8e-21
gi|42544185 galectin-8 isoform a [Homo sapiens] 98 8e-21
gi|4504985 galectin-7 [Homo sapiens] 92 3e-19
gi|109948279 galectin-7B [Homo sapiens] 92 3e-19
gi|5453712 galectin-4 [Homo sapiens] 91 9e-19
gi|216547811 lectin, galactoside-binding, soluble, 12 isoform 3 ... 80 2e-15
gi|20127659 lectin, galactoside-binding, soluble, 12 isoform 2 [... 80 2e-15
gi|216547809 lectin, galactoside-binding, soluble, 12 isoform 1 ... 75 4e-14
gi|216547832 lectin, galactoside-binding, soluble, 12 isoform 5 ... 72 3e-13
gi|216547818 lectin, galactoside-binding, soluble, 12 isoform 4 ... 72 3e-13
gi|5729903 lectin, galactoside-binding, soluble, 2 [Homo sapiens] 68 9e-12
gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens] 68 9e-12
gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens] 68 9e-12
gi|21389357 MAPK-interacting and spindle-stabilizing protein [Ho... 68 9e-12
gi|4504981 galectin-1 [Homo sapiens] 67 1e-11
gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo s... 67 2e-11
gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo sa... 67 2e-11
gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo s... 67 2e-11
gi|126352446 elastin isoform d precursor [Homo sapiens] 66 2e-11
gi|126352322 elastin isoform c precursor [Homo sapiens] 66 2e-11
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 66 2e-11
gi|126352608 elastin isoform e precursor [Homo sapiens] 64 1e-10
gi|126352700 elastin isoform b precursor [Homo sapiens] 64 1e-10
>gi|115430223 galectin 3 [Homo sapiens]
Length = 250
Score = 534 bits (1375), Expect = e-152
Identities = 250/250 (100%), Positives = 250/250 (100%)
Query: 1 MADNFSLHDALSGSGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPP 60
MADNFSLHDALSGSGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPP
Sbjct: 1 MADNFSLHDALSGSGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPP 60
Query: 61 GAYPGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNL 120
GAYPGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNL
Sbjct: 61 GAYPGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNL 120
Query: 121 PLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENNRRVIVCNTKLDNN 180
PLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENNRRVIVCNTKLDNN
Sbjct: 121 PLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENNRRVIVCNTKLDNN 180
Query: 181 WGREERQSVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDI 240
WGREERQSVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDI
Sbjct: 181 WGREERQSVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDI 240
Query: 241 DLTSASYTMI 250
DLTSASYTMI
Sbjct: 241 DLTSASYTMI 250
>gi|6806890 galectin-9 isoform long [Homo sapiens]
Length = 355
Score = 118 bits (296), Expect = 4e-27
Identities = 77/198 (38%), Positives = 105/198 (53%), Gaps = 18/198 (9%)
Query: 51 PGAYPGQAPPGAYPGAPGAYPGAPAP---GVYPGPPSGPGAYPSSGQPSATGAYPATGPY 107
P +P + P G PG +P PAP V S PG Q +T A P Y
Sbjct: 167 PVCFPPR-PRGRRQKPPGVWPANPAPITQTVIHTVQSAPG------QMFSTPAIPPM-MY 218
Query: 108 GAPAGPLIVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENN 167
PA P+ P+ + GG+ P I + GTV P+A R ++ GN +AFH NPRF+EN
Sbjct: 219 PHPAYPM--PFITTILGGLYPSKSILLSGTVLPSAQRFHINLCSGNHIAFHLNPRFDEN- 275
Query: 168 RRVIVCNTKLDNNWGREERQ--SVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRV 225
+V NT++DN+WG EER PF G+ F + +L E KVAV+ HL +Y HR+
Sbjct: 276 --AVVRNTQIDNSWGSEERSLPRKMPFVRGQSFSVWILCEAHCLKVAVDGQHLFEYYHRL 333
Query: 226 KKLNEISKLGISGDIDLT 243
+ L I++L + GDI LT
Sbjct: 334 RNLPTINRLEVGGDIQLT 351
Score = 103 bits (258), Expect = 1e-22
Identities = 57/146 (39%), Positives = 87/146 (59%), Gaps = 11/146 (7%)
Query: 106 PYGAPAGPLIVPYNLPLPGGVVPRMLITILGTV-KPNANRIALDFQRG---NDVAFHFNP 161
PY +PA VP++ + GG+ + IT+ GTV + R A++FQ G ND+AFHFNP
Sbjct: 9 PYLSPA----VPFSGTIQGGLQDGLQITVNGTVLSSSGTRFAVNFQTGFSGNDIAFHFNP 64
Query: 162 RFNENNRRVIVCNTKLDNNWGREERQSVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQY 221
RF + +VCNT+ + +WG EER++ PF+ G PF + LV+ FKV VN +QY
Sbjct: 65 RFEDGG--YVVCNTRQNGSWGPEERKTHMPFQKGMPFDLCFLVQSSDFKVMVNGILFVQY 122
Query: 222 NHRVKKLNEISKLGISGDIDLTSASY 247
HRV + + + ++G + L+ S+
Sbjct: 123 FHRV-PFHRVDTISVNGSVQLSYISF 147
>gi|102469694 galectin-9 isoform short [Homo sapiens]
Length = 323
Score = 116 bits (291), Expect = 2e-26
Identities = 73/182 (40%), Positives = 99/182 (54%), Gaps = 17/182 (9%)
Query: 67 PGAYPGAPAP---GVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLP 123
PG +P PAP V S PG Q +T A P Y PA P+ P+ +
Sbjct: 150 PGVWPANPAPITQTVIHTVQSAPG------QMFSTPAIPPM-MYPHPAYPM--PFITTIL 200
Query: 124 GGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENNRRVIVCNTKLDNNWGR 183
GG+ P I + GTV P+A R ++ GN +AFH NPRF+EN +V NT++DN+WG
Sbjct: 201 GGLYPSKSILLSGTVLPSAQRFHINLCSGNHIAFHLNPRFDEN---AVVRNTQIDNSWGS 257
Query: 184 EERQ--SVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDID 241
EER PF G+ F + +L E KVAV+ HL +Y HR++ L I++L + GDI
Sbjct: 258 EERSLPRKMPFVRGQSFSVWILCEAHCLKVAVDGQHLFEYYHRLRNLPTINRLEVGGDIQ 317
Query: 242 LT 243
LT
Sbjct: 318 LT 319
Score = 103 bits (258), Expect = 1e-22
Identities = 57/146 (39%), Positives = 87/146 (59%), Gaps = 11/146 (7%)
Query: 106 PYGAPAGPLIVPYNLPLPGGVVPRMLITILGTV-KPNANRIALDFQRG---NDVAFHFNP 161
PY +PA VP++ + GG+ + IT+ GTV + R A++FQ G ND+AFHFNP
Sbjct: 9 PYLSPA----VPFSGTIQGGLQDGLQITVNGTVLSSSGTRFAVNFQTGFSGNDIAFHFNP 64
Query: 162 RFNENNRRVIVCNTKLDNNWGREERQSVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQY 221
RF + +VCNT+ + +WG EER++ PF+ G PF + LV+ FKV VN +QY
Sbjct: 65 RFEDGG--YVVCNTRQNGSWGPEERKTHMPFQKGMPFDLCFLVQSSDFKVMVNGILFVQY 122
Query: 222 NHRVKKLNEISKLGISGDIDLTSASY 247
HRV + + + ++G + L+ S+
Sbjct: 123 FHRV-PFHRVDTISVNGSVQLSYISF 147
>gi|111494237 galectin-9 like [Homo sapiens]
Length = 355
Score = 115 bits (289), Expect = 3e-26
Identities = 74/195 (37%), Positives = 104/195 (53%), Gaps = 12/195 (6%)
Query: 51 PGAYPGQAPPGAYPGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAP 110
P +P + P G P P PAP + A SGQ +T A P Y P
Sbjct: 167 PVCFPPR-PRGRRQKPPSVRPANPAPITQTVIHTVQSA---SGQMFSTPAIPPM-MYPHP 221
Query: 111 AGPLIVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFHFNPRFNENNRRV 170
A P+ P+ +PGG+ P I + GTV P+A R ++ G+ +AFH NPRF+EN
Sbjct: 222 AYPM--PFITTIPGGLYPSKSIILSGTVLPSAQRFHINLCSGSHIAFHMNPRFDEN---A 276
Query: 171 IVCNTKLDNNWGREERQ--SVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKL 228
+V NT+++N+WG EER PF G+ F + +L E KVAV+ H+ +Y HR++ L
Sbjct: 277 VVRNTQINNSWGSEERSLPRKMPFVRGQSFSVWILCEAHCLKVAVDGQHVFEYYHRLRNL 336
Query: 229 NEISKLGISGDIDLT 243
I+KL + GDI LT
Sbjct: 337 PTINKLEVGGDIQLT 351
Score = 102 bits (253), Expect = 4e-22
Identities = 57/146 (39%), Positives = 83/146 (56%), Gaps = 11/146 (7%)
Query: 106 PYGAPAGPLIVPYNLPLPGGVVPRMLITILGTV-KPNANRIALDFQRG---NDVAFHFNP 161
PY +PA VP++ + GG+ IT+ G V + R A+DFQ G ND+AFHFNP
Sbjct: 9 PYLSPA----VPFSGTIQGGLQDGFQITVNGAVLSSSGTRFAVDFQTGFSGNDIAFHFNP 64
Query: 162 RFNENNRRVIVCNTKLDNNWGREERQSVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQY 221
RF + +VCNT+ WG EER+ PF+ G PF + LV+ FKV VN + +QY
Sbjct: 65 RFEDGG--YVVCNTRQKGRWGPEERKMHMPFQKGMPFDLCFLVQSSDFKVMVNGSLFVQY 122
Query: 222 NHRVKKLNEISKLGISGDIDLTSASY 247
HRV + + + ++G + L+ S+
Sbjct: 123 FHRV-PFHRVDTISVNGSVQLSYISF 147
>gi|111494239 galectin 9 like [Homo sapiens]
Length = 356
Score = 113 bits (282), Expect = 2e-25
Identities = 77/210 (36%), Positives = 106/210 (50%), Gaps = 15/210 (7%)
Query: 42 PGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAY 101
P A P Q P P +P P P P V P P+ SA+G
Sbjct: 150 PRAVPVQPAFSTVPFSQPV-CFPPRPRGRRQKP-PSVRPANPAPITQTVIHTVQSASGQM 207
Query: 102 ----PATGP--YGAPAGPLIVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDV 155
PA P Y PA P+ P+ +PGG+ P I + GTV P+A R ++ G+ +
Sbjct: 208 FSQTPAIPPMMYPHPAYPM--PFITTIPGGLYPSKSIILSGTVLPSAQRFHINLCSGSHI 265
Query: 156 AFHFNPRFNENNRRVIVCNTKLDNNWGREERQ--SVFPFESGKPFKIQVLVEPDHFKVAV 213
AFH NPRF+EN +V NT+++N+WG EER PF G+ F + +L E KVAV
Sbjct: 266 AFHMNPRFDEN---AVVRNTQINNSWGSEERSLPRKMPFVRGQSFSVWILCEAHCLKVAV 322
Query: 214 NDAHLLQYNHRVKKLNEISKLGISGDIDLT 243
+ H+ +Y HR++ L I+KL + GDI LT
Sbjct: 323 DGQHVFEYYHRLRNLPTINKLEVGGDIQLT 352
Score = 101 bits (251), Expect = 7e-22
Identities = 57/146 (39%), Positives = 83/146 (56%), Gaps = 11/146 (7%)
Query: 106 PYGAPAGPLIVPYNLPLPGGVVPRMLITILGTVKP-NANRIALDFQRG---NDVAFHFNP 161
PY +PA VP++ + GG+ IT+ G V + R A+DFQ G ND+AFHFNP
Sbjct: 9 PYLSPA----VPFSGTIQGGLQDGFQITVNGAVLSCSGTRFAVDFQTGFSGNDIAFHFNP 64
Query: 162 RFNENNRRVIVCNTKLDNNWGREERQSVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQY 221
RF + +VCNT+ WG EER+ PF+ G PF + LV+ FKV VN + +QY
Sbjct: 65 RFEDGG--YVVCNTRQKGTWGPEERKMHMPFQKGMPFDLCFLVQSSDFKVMVNGSLFVQY 122
Query: 222 NHRVKKLNEISKLGISGDIDLTSASY 247
HRV + + + ++G + L+ S+
Sbjct: 123 FHRV-PFHRVDTISVNGSVQLSYISF 147
>gi|42544193 galectin-8 isoform a [Homo sapiens]
Length = 359
Score = 97.8 bits (242), Expect = 8e-21
Identities = 56/140 (40%), Positives = 79/140 (56%), Gaps = 9/140 (6%)
Query: 115 IVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGN------DVAFHFNPRFNENNR 168
++P+ +P + P LI I G V +A+R +D Q G+ DVAFHFNPRF
Sbjct: 16 VIPFVGTIPDQLDPGTLIVIRGHVPSDADRFQVDLQNGSSMKPRADVAFHFNPRFKRAG- 74
Query: 169 RVIVCNTKLDNNWGREERQSVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKL 228
IVCNT ++ WGREE PF+ K F+I ++V D F+VAVN H L Y HR+
Sbjct: 75 -CIVCNTLINEKWGREEITYDTPFKREKSFEIVIMVLKDKFQVAVNGKHTLLYGHRIGP- 132
Query: 229 NEISKLGISGDIDLTSASYT 248
+I LGI G +++ S ++
Sbjct: 133 EKIDTLGIYGKVNIHSIGFS 152
Score = 82.8 bits (203), Expect = 3e-16
Identities = 49/130 (37%), Positives = 68/130 (52%), Gaps = 6/130 (4%)
Query: 116 VPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGN--DVAFHFNPRFNENNRRVIVC 173
+P+ L + P + + G V NA +D G D+A H NPR N + V
Sbjct: 227 LPFAARLNTPMGPGRTVVVKGEVNANAKSFNVDLLAGKSKDIALHLNPRLNI---KAFVR 283
Query: 174 NTKLDNNWGREERQ-SVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEIS 232
N+ L +WG EER + FPF G F++ + + FKVAVN H L+Y HR K+L+ I
Sbjct: 284 NSFLQESWGEEERNITSFPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFKELSSID 343
Query: 233 KLGISGDIDL 242
L I+GDI L
Sbjct: 344 TLEINGDIHL 353
>gi|42544191 galectin-8 isoform b [Homo sapiens]
Length = 317
Score = 97.8 bits (242), Expect = 8e-21
Identities = 56/140 (40%), Positives = 79/140 (56%), Gaps = 9/140 (6%)
Query: 115 IVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGN------DVAFHFNPRFNENNR 168
++P+ +P + P LI I G V +A+R +D Q G+ DVAFHFNPRF
Sbjct: 16 VIPFVGTIPDQLDPGTLIVIRGHVPSDADRFQVDLQNGSSMKPRADVAFHFNPRFKRAG- 74
Query: 169 RVIVCNTKLDNNWGREERQSVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKL 228
IVCNT ++ WGREE PF+ K F+I ++V D F+VAVN H L Y HR+
Sbjct: 75 -CIVCNTLINEKWGREEITYDTPFKREKSFEIVIMVLKDKFQVAVNGKHTLLYGHRIGP- 132
Query: 229 NEISKLGISGDIDLTSASYT 248
+I LGI G +++ S ++
Sbjct: 133 EKIDTLGIYGKVNIHSIGFS 152
Score = 83.2 bits (204), Expect = 2e-16
Identities = 50/132 (37%), Positives = 69/132 (52%), Gaps = 6/132 (4%)
Query: 114 LIVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGN--DVAFHFNPRFNENNRRVI 171
L +P+ L + P + + G V NA +D G D+A H NPR N +
Sbjct: 183 LRLPFAARLNTPMGPGRTVVVKGEVNANAKSFNVDLLAGKSKDIALHLNPRLNI---KAF 239
Query: 172 VCNTKLDNNWGREERQ-SVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNE 230
V N+ L +WG EER + FPF G F++ + + FKVAVN H L+Y HR K+L+
Sbjct: 240 VRNSFLQESWGEEERNITSFPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFKELSS 299
Query: 231 ISKLGISGDIDL 242
I L I+GDI L
Sbjct: 300 IDTLEINGDIHL 311
>gi|42544187 galectin-8 isoform b [Homo sapiens]
Length = 317
Score = 97.8 bits (242), Expect = 8e-21
Identities = 56/140 (40%), Positives = 79/140 (56%), Gaps = 9/140 (6%)
Query: 115 IVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGN------DVAFHFNPRFNENNR 168
++P+ +P + P LI I G V +A+R +D Q G+ DVAFHFNPRF
Sbjct: 16 VIPFVGTIPDQLDPGTLIVIRGHVPSDADRFQVDLQNGSSMKPRADVAFHFNPRFKRAG- 74
Query: 169 RVIVCNTKLDNNWGREERQSVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKL 228
IVCNT ++ WGREE PF+ K F+I ++V D F+VAVN H L Y HR+
Sbjct: 75 -CIVCNTLINEKWGREEITYDTPFKREKSFEIVIMVLKDKFQVAVNGKHTLLYGHRIGP- 132
Query: 229 NEISKLGISGDIDLTSASYT 248
+I LGI G +++ S ++
Sbjct: 133 EKIDTLGIYGKVNIHSIGFS 152
Score = 83.2 bits (204), Expect = 2e-16
Identities = 50/132 (37%), Positives = 69/132 (52%), Gaps = 6/132 (4%)
Query: 114 LIVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGN--DVAFHFNPRFNENNRRVI 171
L +P+ L + P + + G V NA +D G D+A H NPR N +
Sbjct: 183 LRLPFAARLNTPMGPGRTVVVKGEVNANAKSFNVDLLAGKSKDIALHLNPRLNI---KAF 239
Query: 172 VCNTKLDNNWGREERQ-SVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNE 230
V N+ L +WG EER + FPF G F++ + + FKVAVN H L+Y HR K+L+
Sbjct: 240 VRNSFLQESWGEEERNITSFPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFKELSS 299
Query: 231 ISKLGISGDIDL 242
I L I+GDI L
Sbjct: 300 IDTLEINGDIHL 311
>gi|42544185 galectin-8 isoform a [Homo sapiens]
Length = 359
Score = 97.8 bits (242), Expect = 8e-21
Identities = 56/140 (40%), Positives = 79/140 (56%), Gaps = 9/140 (6%)
Query: 115 IVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGN------DVAFHFNPRFNENNR 168
++P+ +P + P LI I G V +A+R +D Q G+ DVAFHFNPRF
Sbjct: 16 VIPFVGTIPDQLDPGTLIVIRGHVPSDADRFQVDLQNGSSMKPRADVAFHFNPRFKRAG- 74
Query: 169 RVIVCNTKLDNNWGREERQSVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKL 228
IVCNT ++ WGREE PF+ K F+I ++V D F+VAVN H L Y HR+
Sbjct: 75 -CIVCNTLINEKWGREEITYDTPFKREKSFEIVIMVLKDKFQVAVNGKHTLLYGHRIGP- 132
Query: 229 NEISKLGISGDIDLTSASYT 248
+I LGI G +++ S ++
Sbjct: 133 EKIDTLGIYGKVNIHSIGFS 152
Score = 82.8 bits (203), Expect = 3e-16
Identities = 49/130 (37%), Positives = 68/130 (52%), Gaps = 6/130 (4%)
Query: 116 VPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGN--DVAFHFNPRFNENNRRVIVC 173
+P+ L + P + + G V NA +D G D+A H NPR N + V
Sbjct: 227 LPFAARLNTPMGPGRTVVVKGEVNANAKSFNVDLLAGKSKDIALHLNPRLNI---KAFVR 283
Query: 174 NTKLDNNWGREERQ-SVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEIS 232
N+ L +WG EER + FPF G F++ + + FKVAVN H L+Y HR K+L+ I
Sbjct: 284 NSFLQESWGEEERNITSFPFSPGMYFEMIIYCDVREFKVAVNGVHSLEYKHRFKELSSID 343
Query: 233 KLGISGDIDL 242
L I+GDI L
Sbjct: 344 TLEINGDIHL 353
>gi|4504985 galectin-7 [Homo sapiens]
Length = 136
Score = 92.4 bits (228), Expect = 3e-19
Identities = 48/133 (36%), Positives = 75/133 (56%), Gaps = 8/133 (6%)
Query: 116 VPYNLPLPGGVVPRMLITILGTVKPNANRIALDF----QRGNDVAFHFNPRFNENNRRVI 171
VP+ LP G+ P ++ I G V PNA+R ++ ++G+D A HFNPR + + +
Sbjct: 4 VPHKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDTSE---V 60
Query: 172 VCNTKLDNNWGREERQSVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEI 231
V N+K +WGREER PF+ G+PF++ ++ D FK V DA + HR+ L +
Sbjct: 61 VFNSKEQGSWGREERGPGVPFQRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRL-PLARV 119
Query: 232 SKLGISGDIDLTS 244
+ + GD+ L S
Sbjct: 120 RLVEVGGDVQLDS 132
>gi|109948279 galectin-7B [Homo sapiens]
Length = 136
Score = 92.4 bits (228), Expect = 3e-19
Identities = 48/133 (36%), Positives = 75/133 (56%), Gaps = 8/133 (6%)
Query: 116 VPYNLPLPGGVVPRMLITILGTVKPNANRIALDF----QRGNDVAFHFNPRFNENNRRVI 171
VP+ LP G+ P ++ I G V PNA+R ++ ++G+D A HFNPR + + +
Sbjct: 4 VPHKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDTSE---V 60
Query: 172 VCNTKLDNNWGREERQSVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEI 231
V N+K +WGREER PF+ G+PF++ ++ D FK V DA + HR+ L +
Sbjct: 61 VFNSKEQGSWGREERGPGVPFQRGQPFEVLIIASDDGFKAVVGDAQYHHFRHRL-PLARV 119
Query: 232 SKLGISGDIDLTS 244
+ + GD+ L S
Sbjct: 120 RLVEVGGDVQLDS 132
>gi|5453712 galectin-4 [Homo sapiens]
Length = 323
Score = 90.9 bits (224), Expect = 9e-19
Identities = 49/136 (36%), Positives = 76/136 (55%), Gaps = 7/136 (5%)
Query: 116 VPYNLPLPGGVVPRMLITILGTVKPNANRIALDF----QRGNDVAFHFNPRFNENNRRVI 171
+PY P+PGG+ M + I G + R ++F G+DVAFHFNPRF+ ++ +
Sbjct: 17 LPYYQPIPGGLNVGMSVYIQGVASEHMKRFFVNFVVGQDPGSDVAFHFNPRFDGWDK--V 74
Query: 172 VCNTKLDNNWGREERQSVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEI 231
V NT WG EER+ PF+ G F++ +V +H+KV VN +Y HR+ L +
Sbjct: 75 VFNTLQGGKWGSEERKRSMPFKKGAAFELVFIVLAEHYKVVVNGNPFYEYGHRL-PLQMV 133
Query: 232 SKLGISGDIDLTSASY 247
+ L + GD+ L S ++
Sbjct: 134 THLQVDGDLQLQSINF 149
Score = 82.0 bits (201), Expect = 4e-16
Identities = 58/182 (31%), Positives = 80/182 (43%), Gaps = 17/182 (9%)
Query: 65 GAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPG 124
G P G P YPGP G + P+ G P VPY L G
Sbjct: 152 GQPLRPQGPPMMPPYPGP--GHCHQQLNSLPTMEGPPTFNPP---------VPYFGRLQG 200
Query: 125 GVVPRMLITILGTVKPNANRIALDFQRGN--DVAFHFNPRFNENNRRVIVCNTKLDNNWG 182
G+ R I I G V P A++F+ G+ D+A H NPR +V N+ L+ +WG
Sbjct: 201 GLTARRTIIIKGYVPPTGKSFAINFKVGSSGDIALHINPRMGNGT---VVRNSLLNGSWG 257
Query: 183 REERQSVF-PFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDID 241
EE++ PF G+ F + + D FKV N HL + HR+ + L I GD+
Sbjct: 258 SEEKKITHNPFGPGQFFDLSIRCGLDRFKVYANGQHLFDFAHRLSAFQRVDTLEIQGDVT 317
Query: 242 LT 243
L+
Sbjct: 318 LS 319
>gi|216547811 lectin, galactoside-binding, soluble, 12 isoform 3
[Homo sapiens]
Length = 327
Score = 80.1 bits (196), Expect = 2e-15
Identities = 50/142 (35%), Positives = 71/142 (50%), Gaps = 8/142 (5%)
Query: 115 IVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRG------NDVAFHFNPRFNENNR 168
+VPY + GG+ ++ + G V +A+R +DFQ G D+AFHFNPRF+
Sbjct: 46 VVPYVTTIFGGLHAGKMVMLQGVVPLDAHRFQVDFQCGCSLCPRPDIAFHFNPRFHTTKP 105
Query: 169 RVIVCNTKLDNNWGREERQSVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKL 228
VI CNT W RE R G F I L + KV+VN H L + +R+ L
Sbjct: 106 HVI-CNTLHGGRWQREARWPHLALRRGSSFLILFLFGNEEVKVSVNGQHFLHFRYRL-PL 163
Query: 229 NEISKLGISGDIDLTSASYTMI 250
+ + LGI GDI + + + I
Sbjct: 164 SHVDTLGIFGDILVEAVGFLNI 185
Score = 29.3 bits (64), Expect = 3.4
Identities = 31/132 (23%), Positives = 55/132 (41%), Gaps = 15/132 (11%)
Query: 116 VPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFH----FNPRFNENNRRVI 171
VP + LP G+ P +I + G V + + D A H F + I
Sbjct: 201 VPCSHALPQGLSPGQVIIVRGLVLQEPKHFTVSLR---DQAAHAPVTLRASFADRTLAWI 257
Query: 172 VCNTKLDNNWGREERQSV-FPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNE 230
+ WG+++ S F F + F++ +L + K+A+N L + + L +
Sbjct: 258 -------SRWGQKKLISAPFLFYPQRFFEVLLLFQEGGLKLALNGQGLGATSMNQQALEQ 310
Query: 231 ISKLGISGDIDL 242
+ +L ISG + L
Sbjct: 311 LRELRISGSVQL 322
>gi|20127659 lectin, galactoside-binding, soluble, 12 isoform 2
[Homo sapiens]
Length = 336
Score = 80.1 bits (196), Expect = 2e-15
Identities = 50/142 (35%), Positives = 71/142 (50%), Gaps = 8/142 (5%)
Query: 115 IVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRG------NDVAFHFNPRFNENNR 168
+VPY + GG+ ++ + G V +A+R +DFQ G D+AFHFNPRF+
Sbjct: 46 VVPYVTTIFGGLHAGKMVMLQGVVPLDAHRFQVDFQCGCSLCPRPDIAFHFNPRFHTTKP 105
Query: 169 RVIVCNTKLDNNWGREERQSVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKL 228
VI CNT W RE R G F I L + KV+VN H L + +R+ L
Sbjct: 106 HVI-CNTLHGGRWQREARWPHLALRRGSSFLILFLFGNEEVKVSVNGQHFLHFRYRL-PL 163
Query: 229 NEISKLGISGDIDLTSASYTMI 250
+ + LGI GDI + + + I
Sbjct: 164 SHVDTLGIFGDILVEAVGFLNI 185
Score = 35.0 bits (79), Expect = 0.061
Identities = 36/147 (24%), Positives = 62/147 (42%), Gaps = 15/147 (10%)
Query: 101 YPATGPYGAPAGPLIVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFH-- 158
YPA P+ + L VP + LP G+ P +I + G V + + D A H
Sbjct: 195 YPAGHPFLLMSPRLEVPCSHALPQGLSPGQVIIVRGLVLQEPKHFTVSLR---DQAAHAP 251
Query: 159 --FNPRFNENNRRVIVCNTKLDNNWGREERQSV-FPFESGKPFKIQVLVEPDHFKVAVND 215
F + I + WG+++ S F F + F++ +L + K+A+N
Sbjct: 252 VTLRASFADRTLAWI-------SRWGQKKLISAPFLFYPQRFFEVLLLFQEGGLKLALNG 304
Query: 216 AHLLQYNHRVKKLNEISKLGISGDIDL 242
L + + L ++ +L ISG + L
Sbjct: 305 QGLGATSMNQQALEQLRELRISGSVQL 331
>gi|216547809 lectin, galactoside-binding, soluble, 12 isoform 1
[Homo sapiens]
Length = 337
Score = 75.5 bits (184), Expect = 4e-14
Identities = 50/143 (34%), Positives = 71/143 (49%), Gaps = 9/143 (6%)
Query: 115 IVPYNLPLPGGVVPRMLITILGTVKPNAN-RIALDFQRG------NDVAFHFNPRFNENN 167
+VPY + GG+ ++ + G V +A+ R +DFQ G D+AFHFNPRF+
Sbjct: 46 VVPYVTTIFGGLHAGKMVMLQGVVPLDAHSRFQVDFQCGCSLCPRPDIAFHFNPRFHTTK 105
Query: 168 RRVIVCNTKLDNNWGREERQSVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKK 227
VI CNT W RE R G F I L + KV+VN H L + +R+
Sbjct: 106 PHVI-CNTLHGGRWQREARWPHLALRRGSSFLILFLFGNEEVKVSVNGQHFLHFRYRL-P 163
Query: 228 LNEISKLGISGDIDLTSASYTMI 250
L+ + LGI GDI + + + I
Sbjct: 164 LSHVDTLGIFGDILVEAVGFLNI 186
Score = 35.0 bits (79), Expect = 0.061
Identities = 36/147 (24%), Positives = 62/147 (42%), Gaps = 15/147 (10%)
Query: 101 YPATGPYGAPAGPLIVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFH-- 158
YPA P+ + L VP + LP G+ P +I + G V + + D A H
Sbjct: 196 YPAGHPFLLMSPRLEVPCSHALPQGLSPGQVIIVRGLVLQEPKHFTVSLR---DQAAHAP 252
Query: 159 --FNPRFNENNRRVIVCNTKLDNNWGREERQSV-FPFESGKPFKIQVLVEPDHFKVAVND 215
F + I + WG+++ S F F + F++ +L + K+A+N
Sbjct: 253 VTLRASFADRTLAWI-------SRWGQKKLISAPFLFYPQRFFEVLLLFQEGGLKLALNG 305
Query: 216 AHLLQYNHRVKKLNEISKLGISGDIDL 242
L + + L ++ +L ISG + L
Sbjct: 306 QGLGATSMNQQALEQLRELRISGSVQL 332
>gi|216547832 lectin, galactoside-binding, soluble, 12 isoform 5
[Homo sapiens]
Length = 266
Score = 72.4 bits (176), Expect = 3e-13
Identities = 45/126 (35%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
Query: 131 LITILGTVKPNANRIALDFQRG------NDVAFHFNPRFNENNRRVIVCNTKLDNNWGRE 184
++ + G V +A+R +DFQ G D+AFHFNPRF+ VI CNT W RE
Sbjct: 1 MVMLQGVVPLDAHRFQVDFQCGCSLCPRPDIAFHFNPRFHTTKPHVI-CNTLHGGRWQRE 59
Query: 185 ERQSVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTS 244
R G F I L + KV+VN H L + +R+ L+ + LGI GDI + +
Sbjct: 60 ARWPHLALRRGSSFLILFLFGNEEVKVSVNGQHFLHFRYRL-PLSHVDTLGIFGDILVEA 118
Query: 245 ASYTMI 250
+ I
Sbjct: 119 VGFLNI 124
Score = 29.3 bits (64), Expect = 3.4
Identities = 31/132 (23%), Positives = 55/132 (41%), Gaps = 15/132 (11%)
Query: 116 VPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFH----FNPRFNENNRRVI 171
VP + LP G+ P +I + G V + + D A H F + I
Sbjct: 140 VPCSHALPQGLSPGQVIIVRGLVLQEPKHFTVSLR---DQAAHAPVTLRASFADRTLAWI 196
Query: 172 VCNTKLDNNWGREERQSV-FPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNE 230
+ WG+++ S F F + F++ +L + K+A+N L + + L +
Sbjct: 197 -------SRWGQKKLISAPFLFYPQRFFEVLLLFQEGGLKLALNGQGLGATSMNQQALEQ 249
Query: 231 ISKLGISGDIDL 242
+ +L ISG + L
Sbjct: 250 LRELRISGSVQL 261
>gi|216547818 lectin, galactoside-binding, soluble, 12 isoform 4
[Homo sapiens]
Length = 275
Score = 72.4 bits (176), Expect = 3e-13
Identities = 45/126 (35%), Positives = 63/126 (50%), Gaps = 8/126 (6%)
Query: 131 LITILGTVKPNANRIALDFQRG------NDVAFHFNPRFNENNRRVIVCNTKLDNNWGRE 184
++ + G V +A+R +DFQ G D+AFHFNPRF+ VI CNT W RE
Sbjct: 1 MVMLQGVVPLDAHRFQVDFQCGCSLCPRPDIAFHFNPRFHTTKPHVI-CNTLHGGRWQRE 59
Query: 185 ERQSVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTS 244
R G F I L + KV+VN H L + +R+ L+ + LGI GDI + +
Sbjct: 60 ARWPHLALRRGSSFLILFLFGNEEVKVSVNGQHFLHFRYRL-PLSHVDTLGIFGDILVEA 118
Query: 245 ASYTMI 250
+ I
Sbjct: 119 VGFLNI 124
Score = 35.0 bits (79), Expect = 0.061
Identities = 36/147 (24%), Positives = 62/147 (42%), Gaps = 15/147 (10%)
Query: 101 YPATGPYGAPAGPLIVPYNLPLPGGVVPRMLITILGTVKPNANRIALDFQRGNDVAFH-- 158
YPA P+ + L VP + LP G+ P +I + G V + + D A H
Sbjct: 134 YPAGHPFLLMSPRLEVPCSHALPQGLSPGQVIIVRGLVLQEPKHFTVSLR---DQAAHAP 190
Query: 159 --FNPRFNENNRRVIVCNTKLDNNWGREERQSV-FPFESGKPFKIQVLVEPDHFKVAVND 215
F + I + WG+++ S F F + F++ +L + K+A+N
Sbjct: 191 VTLRASFADRTLAWI-------SRWGQKKLISAPFLFYPQRFFEVLLLFQEGGLKLALNG 243
Query: 216 AHLLQYNHRVKKLNEISKLGISGDIDL 242
L + + L ++ +L ISG + L
Sbjct: 244 QGLGATSMNQQALEQLRELRISGSVQL 270
>gi|5729903 lectin, galactoside-binding, soluble, 2 [Homo sapiens]
Length = 132
Score = 67.8 bits (164), Expect = 9e-12
Identities = 38/118 (32%), Positives = 63/118 (53%), Gaps = 5/118 (4%)
Query: 128 PRMLITILGTVKPNANRIALDFQRGND-VAFHFNPRFNENNRRVIVCNTKLDNNWGREER 186
P + I G++ + ++ +G D + HFNPRF+E+ IVCN+ +NWG+E+R
Sbjct: 14 PGSTLKITGSIADGTDGFVINLGQGTDKLNLHFNPRFSEST---IVCNSLDGSNWGQEQR 70
Query: 187 QSVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTS 244
+ F G K V E D FKV + D H L + +R+ + +S L + G +++S
Sbjct: 71 EDHLCFSPGSEVKFTVTFESDKFKVKLPDGHELTFPNRLGH-SHLSYLSVRGGFNMSS 127
>gi|32895368 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 67.8 bits (164), Expect = 9e-12
Identities = 48/126 (38%), Positives = 56/126 (44%), Gaps = 8/126 (6%)
Query: 19 PQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGAPAPGV 78
P+G PG G+Q G G PG G G P PG PG PG +PG PGV
Sbjct: 481 PKGEPGIPGDQ--GLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPG-FPGIGKPGV 537
Query: 79 --YPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPGGVVPRMLITILG 136
GPP PGA GQP G GP G P P ++P P G +P M + I G
Sbjct: 538 AGLHGPPGKPGALGPQGQPGLPG---PPGPPGPPGPPAVMPPTPPPQGEYLPDMGLGIDG 594
Query: 137 TVKPNA 142
P+A
Sbjct: 595 VKPPHA 600
Score = 56.2 bits (134), Expect = 3e-08
Identities = 44/127 (34%), Positives = 48/127 (37%), Gaps = 11/127 (8%)
Query: 6 SLHDALSGSGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPG--AYPGQAPPGAY 63
SL G P P+G PG G G G G P YPG PG PG+
Sbjct: 115 SLRGEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGM 174
Query: 64 PGAPG--AYPGAPAPGVYPGP--PSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYN 119
PGA G G P PGP P GP P G+P G GP G P
Sbjct: 175 PGAKGEIGQKGEIGPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRG-----PKG 229
Query: 120 LPLPGGV 126
LP P G+
Sbjct: 230 LPGPQGL 236
Score = 53.1 bits (126), Expect = 2e-07
Identities = 43/129 (33%), Positives = 50/129 (38%), Gaps = 14/129 (10%)
Query: 11 LSGSGNPNPQGWPGAWGNQ----PAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAY-PG 65
L G G P G PG G + P G G G P G PGA + PPG + P
Sbjct: 204 LPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFGMPGAPGVKGPPGMHGPP 263
Query: 66 APGAYPGAPAPGV--YPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLI-------V 116
P PG PGV +PGP G + G+P G G G P P I +
Sbjct: 264 GPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPGIGKPGQDGI 323
Query: 117 PYNLPLPGG 125
P PGG
Sbjct: 324 PGQPGFPGG 332
Score = 52.8 bits (125), Expect = 3e-07
Identities = 48/134 (35%), Positives = 54/134 (40%), Gaps = 27/134 (20%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPG-QAPPG--------AYPGQ-------A 58
G P G PG G P GA G+PG G G Q PPG +PG+
Sbjct: 390 GEPGLPGIPGPMG--PPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGFLGEVG 447
Query: 59 PPG--AYPGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGP-----YGAPA 111
PPG PG G A GV PG P PG G+P G GP G P+
Sbjct: 448 PPGMRGLPGPIGPKGEAGQKGV-PGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPS 506
Query: 112 GPLIVPYNLPLPGG 125
GP I P +P P G
Sbjct: 507 GP-IGPPGIPGPKG 519
Score = 50.1 bits (118), Expect = 2e-06
Identities = 47/150 (31%), Positives = 55/150 (36%), Gaps = 21/150 (14%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPG--AYPGAPG--AY 70
G P PQG G G++ G G PG P G P PG PG +PG G
Sbjct: 229 GLPGPQGLRGPKGDKGFGMPGAPGVKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGK 288
Query: 71 PGAP----------APGVYPGPPSGPGAYPSS-----GQPSATGAYPATGPYGAPAGPLI 115
PGAP PGV GPP PG GQP G G G P P +
Sbjct: 289 PGAPGEPGPQGPIGVPGV-QGPPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGL 347
Query: 116 VPYNLP-LPGGVVPRMLITILGTVKPNANR 144
P PG R + + G + P +
Sbjct: 348 PGIGKPGFPGPKGDRGMGGVPGALGPRGEK 377
Score = 49.3 bits (116), Expect = 3e-06
Identities = 55/162 (33%), Positives = 62/162 (38%), Gaps = 41/162 (25%)
Query: 5 FSLHDALSGSGNPNPQGWPGAWG----NQPA--------------GAGGYPGASYPGAYP 46
F + A G P G PG G +P GA G PG P P
Sbjct: 245 FGMPGAPGVKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVP 304
Query: 47 G-QAPPGAYPGQAPPG--AYPGAPGAYPGAPA----PGVYPGPPSGPG----AYPS---- 91
G Q PPG PG PG PG PG +PG PG+ PGPP PG +P
Sbjct: 305 GVQGPPG-IPGIGKPGQDGIPGQPG-FPGGKGEQGLPGL-PGPPGLPGIGKPGFPGPKGD 361
Query: 92 ---SGQPSATGAYPATGPYGAP--AGPLIVPYNLPLPGGVVP 128
G P A G GP GAP GP P +PG + P
Sbjct: 362 RGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGP 403
Score = 49.3 bits (116), Expect = 3e-06
Identities = 43/129 (33%), Positives = 48/129 (37%), Gaps = 19/129 (14%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGA-SYPGA-----YPGQAPPGAYPGQAPPGAYPGAPG 68
G P QG PG G G G PG +PG PG P PG PG +PG G
Sbjct: 302 GVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPG-FPGPKG 360
Query: 69 -----AYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGA-------PAGPLIV 116
PGA P GP PG G+P G GP GA G ++
Sbjct: 361 DRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVG 420
Query: 117 PYNLPLPGG 125
P P P G
Sbjct: 421 PQGPPGPKG 429
Score = 49.3 bits (116), Expect = 3e-06
Identities = 33/81 (40%), Positives = 37/81 (45%), Gaps = 11/81 (13%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGAP 74
G P P+G PG G G+PG PG PPG PG P PG PG PG P
Sbjct: 513 GIPGPKGEPGL-----PGPPGFPGIGKPGVAGLHGPPGK-PGALGPQGQPGLPGP-PGPP 565
Query: 75 APGVYPGPPS-GPGAYPSSGQ 94
P PGPP+ P P G+
Sbjct: 566 GP---PGPPAVMPPTPPPQGE 583
Score = 48.5 bits (114), Expect = 5e-06
Identities = 47/134 (35%), Positives = 50/134 (37%), Gaps = 27/134 (20%)
Query: 11 LSGSGNPNPQGWPGAWGNQPAGAG--GYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPG 68
+ G G P G PG G P G G G PG P PG PG +PG G PG
Sbjct: 312 IPGIGKPGQDGIPGQPGF-PGGKGEQGLPGLPGPPGLPGIGKPG-FPGPKGDRGMGGVPG 369
Query: 69 AY-----------------PGAPA-PGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAP 110
A PG P PG+ PGP PGA G P G GP G P
Sbjct: 370 ALGPRGEKGPIGAPGIGGPPGEPGLPGI-PGPMGPPGAI---GFPGPKGEGGIVGPQG-P 424
Query: 111 AGPLIVPYNLPLPG 124
GP P PG
Sbjct: 425 PGPKGEPGLQGFPG 438
Score = 44.3 bits (103), Expect = 1e-04
Identities = 39/114 (34%), Positives = 42/114 (36%), Gaps = 21/114 (18%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGAP 74
G P P G+PG AG G PG PGA Q PG PPG PG P P P
Sbjct: 522 GLPGPPGFPGIGKPGVAGLHGPPGK--PGALGPQGQPGLPGPPGPPGP-PGPPAVMPPTP 578
Query: 75 AP-------------GVYP----GPPSGPGAYPSSGQPSATGAYPAT-GPYGAP 110
P GV P G G P+ P+ T A P GAP
Sbjct: 579 PPQGEYLPDMGLGIDGVKPPHAYGAKKGKNGGPAYEMPAFTAELTAPFPPVGAP 632
>gi|17738302 alpha 1 type VIII collagen precursor [Homo sapiens]
Length = 744
Score = 67.8 bits (164), Expect = 9e-12
Identities = 48/126 (38%), Positives = 56/126 (44%), Gaps = 8/126 (6%)
Query: 19 PQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGAPAPGV 78
P+G PG G+Q G G PG G G P PG PG PG +PG PGV
Sbjct: 481 PKGEPGIPGDQ--GLQGPPGIPGIGGPSGPIGPPGIPGPKGEPGLPGPPG-FPGIGKPGV 537
Query: 79 --YPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPGGVVPRMLITILG 136
GPP PGA GQP G GP G P P ++P P G +P M + I G
Sbjct: 538 AGLHGPPGKPGALGPQGQPGLPG---PPGPPGPPGPPAVMPPTPPPQGEYLPDMGLGIDG 594
Query: 137 TVKPNA 142
P+A
Sbjct: 595 VKPPHA 600
Score = 56.2 bits (134), Expect = 3e-08
Identities = 44/127 (34%), Positives = 48/127 (37%), Gaps = 11/127 (8%)
Query: 6 SLHDALSGSGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPG--AYPGQAPPGAY 63
SL G P P+G PG G G G G P YPG PG PG+
Sbjct: 115 SLRGEQGPRGEPGPRGPPGPPGLPGHGIPGIKGKPGPQGYPGVGKPGMPGMPGKPGAMGM 174
Query: 64 PGAPG--AYPGAPAPGVYPGP--PSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYN 119
PGA G G P PGP P GP P G+P G GP G P
Sbjct: 175 PGAKGEIGQKGEIGPMGIPGPQGPPGPHGLPGIGKPGGPGLPGQPGPKGDRG-----PKG 229
Query: 120 LPLPGGV 126
LP P G+
Sbjct: 230 LPGPQGL 236
Score = 53.1 bits (126), Expect = 2e-07
Identities = 43/129 (33%), Positives = 50/129 (38%), Gaps = 14/129 (10%)
Query: 11 LSGSGNPNPQGWPGAWGNQ----PAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAY-PG 65
L G G P G PG G + P G G G P G PGA + PPG + P
Sbjct: 204 LPGIGKPGGPGLPGQPGPKGDRGPKGLPGPQGLRGPKGDKGFGMPGAPGVKGPPGMHGPP 263
Query: 66 APGAYPGAPAPGV--YPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLI-------V 116
P PG PGV +PGP G + G+P G G G P P I +
Sbjct: 264 GPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVPGVQGPPGIPGIGKPGQDGI 323
Query: 117 PYNLPLPGG 125
P PGG
Sbjct: 324 PGQPGFPGG 332
Score = 52.8 bits (125), Expect = 3e-07
Identities = 48/134 (35%), Positives = 54/134 (40%), Gaps = 27/134 (20%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPG-QAPPG--------AYPGQ-------A 58
G P G PG G P GA G+PG G G Q PPG +PG+
Sbjct: 390 GEPGLPGIPGPMG--PPGAIGFPGPKGEGGIVGPQGPPGPKGEPGLQGFPGKPGFLGEVG 447
Query: 59 PPG--AYPGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGP-----YGAPA 111
PPG PG G A GV PG P PG G+P G GP G P+
Sbjct: 448 PPGMRGLPGPIGPKGEAGQKGV-PGLPGVPGLLGPKGEPGIPGDQGLQGPPGIPGIGGPS 506
Query: 112 GPLIVPYNLPLPGG 125
GP I P +P P G
Sbjct: 507 GP-IGPPGIPGPKG 519
Score = 50.1 bits (118), Expect = 2e-06
Identities = 47/150 (31%), Positives = 55/150 (36%), Gaps = 21/150 (14%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPG--AYPGAPG--AY 70
G P PQG G G++ G G PG P G P PG PG +PG G
Sbjct: 229 GLPGPQGLRGPKGDKGFGMPGAPGVKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGK 288
Query: 71 PGAP----------APGVYPGPPSGPGAYPSS-----GQPSATGAYPATGPYGAPAGPLI 115
PGAP PGV GPP PG GQP G G G P P +
Sbjct: 289 PGAPGEPGPQGPIGVPGV-QGPPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGL 347
Query: 116 VPYNLP-LPGGVVPRMLITILGTVKPNANR 144
P PG R + + G + P +
Sbjct: 348 PGIGKPGFPGPKGDRGMGGVPGALGPRGEK 377
Score = 49.3 bits (116), Expect = 3e-06
Identities = 55/162 (33%), Positives = 62/162 (38%), Gaps = 41/162 (25%)
Query: 5 FSLHDALSGSGNPNPQGWPGAWG----NQPA--------------GAGGYPGASYPGAYP 46
F + A G P G PG G +P GA G PG P P
Sbjct: 245 FGMPGAPGVKGPPGMHGPPGPVGLPGVGKPGVTGFPGPQGPLGKPGAPGEPGPQGPIGVP 304
Query: 47 G-QAPPGAYPGQAPPG--AYPGAPGAYPGAPA----PGVYPGPPSGPG----AYPS---- 91
G Q PPG PG PG PG PG +PG PG+ PGPP PG +P
Sbjct: 305 GVQGPPG-IPGIGKPGQDGIPGQPG-FPGGKGEQGLPGL-PGPPGLPGIGKPGFPGPKGD 361
Query: 92 ---SGQPSATGAYPATGPYGAP--AGPLIVPYNLPLPGGVVP 128
G P A G GP GAP GP P +PG + P
Sbjct: 362 RGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGP 403
Score = 49.3 bits (116), Expect = 3e-06
Identities = 43/129 (33%), Positives = 48/129 (37%), Gaps = 19/129 (14%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGA-SYPGA-----YPGQAPPGAYPGQAPPGAYPGAPG 68
G P QG PG G G G PG +PG PG P PG PG +PG G
Sbjct: 302 GVPGVQGPPGIPGIGKPGQDGIPGQPGFPGGKGEQGLPGLPGPPGLPGIGKPG-FPGPKG 360
Query: 69 -----AYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGA-------PAGPLIV 116
PGA P GP PG G+P G GP GA G ++
Sbjct: 361 DRGMGGVPGALGPRGEKGPIGAPGIGGPPGEPGLPGIPGPMGPPGAIGFPGPKGEGGIVG 420
Query: 117 PYNLPLPGG 125
P P P G
Sbjct: 421 PQGPPGPKG 429
Score = 49.3 bits (116), Expect = 3e-06
Identities = 33/81 (40%), Positives = 37/81 (45%), Gaps = 11/81 (13%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGAP 74
G P P+G PG G G+PG PG PPG PG P PG PG PG P
Sbjct: 513 GIPGPKGEPGL-----PGPPGFPGIGKPGVAGLHGPPGK-PGALGPQGQPGLPGP-PGPP 565
Query: 75 APGVYPGPPS-GPGAYPSSGQ 94
P PGPP+ P P G+
Sbjct: 566 GP---PGPPAVMPPTPPPQGE 583
Score = 48.5 bits (114), Expect = 5e-06
Identities = 47/134 (35%), Positives = 50/134 (37%), Gaps = 27/134 (20%)
Query: 11 LSGSGNPNPQGWPGAWGNQPAGAG--GYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPG 68
+ G G P G PG G P G G G PG P PG PG +PG G PG
Sbjct: 312 IPGIGKPGQDGIPGQPGF-PGGKGEQGLPGLPGPPGLPGIGKPG-FPGPKGDRGMGGVPG 369
Query: 69 AY-----------------PGAPA-PGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAP 110
A PG P PG+ PGP PGA G P G GP G P
Sbjct: 370 ALGPRGEKGPIGAPGIGGPPGEPGLPGI-PGPMGPPGAI---GFPGPKGEGGIVGPQG-P 424
Query: 111 AGPLIVPYNLPLPG 124
GP P PG
Sbjct: 425 PGPKGEPGLQGFPG 438
Score = 44.3 bits (103), Expect = 1e-04
Identities = 39/114 (34%), Positives = 42/114 (36%), Gaps = 21/114 (18%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGAP 74
G P P G+PG AG G PG PGA Q PG PPG PG P P P
Sbjct: 522 GLPGPPGFPGIGKPGVAGLHGPPGK--PGALGPQGQPGLPGPPGPPGP-PGPPAVMPPTP 578
Query: 75 AP-------------GVYP----GPPSGPGAYPSSGQPSATGAYPAT-GPYGAP 110
P GV P G G P+ P+ T A P GAP
Sbjct: 579 PPQGEYLPDMGLGIDGVKPPHAYGAKKGKNGGPAYEMPAFTAELTAPFPPVGAP 632
>gi|21389357 MAPK-interacting and spindle-stabilizing protein [Homo
sapiens]
Length = 245
Score = 67.8 bits (164), Expect = 9e-12
Identities = 53/142 (37%), Positives = 60/142 (42%), Gaps = 35/142 (24%)
Query: 1 MADNFSLHDAL-------------SGSGNPNPQGWPGA--WGNQPAGAG---GYPGASYP 42
M+D FSL DAL + G P PQGWPG+ W N A + G P ++ P
Sbjct: 1 MSDEFSLADALPEHSPAKTSAVSNTKPGQP-PQGWPGSNPWNNPSAPSSVPSGLPPSATP 59
Query: 43 GAYP-GQAPPGAYPGQAPPGAYPGAPGAYPGAPAPGVYPGPPSGPGAYPSS--GQPSATG 99
P G AP G YP P G PG P AP P P P G YP+ P TG
Sbjct: 60 STVPFGPAPTGMYPSVPPTGPPPGPP-----APFPPSGPSCPPPGGPYPAPTVPGPGPTG 114
Query: 100 AYPATG--------PYGAPAGP 113
YP PYGAP P
Sbjct: 115 PYPTPNMPFPELPRPYGAPTDP 136
Score = 60.1 bits (144), Expect = 2e-09
Identities = 46/128 (35%), Positives = 53/128 (41%), Gaps = 33/128 (25%)
Query: 17 PNPQGWP---------GAWGNQPAG------AGGYPGASYPGAYPGQAPPGAYPGQAPPG 61
P P G P G WG+ +G G YP + P YP PG YP PP
Sbjct: 127 PRPYGAPTDPAAAGPLGPWGSMSSGPWAPGMGGQYPTPNMP--YPS---PGPYPAPPPPQ 181
Query: 62 AYPGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYN-- 119
A PGA P P V PG P Y P+ TG+YP G Y P+ P VP
Sbjct: 182 A----PGAAPPVPWGTVPPGAWGPPAPY-----PAPTGSYPTPGLYPTPSNPFQVPSGPS 232
Query: 120 --LPLPGG 125
P+PGG
Sbjct: 233 GAPPMPGG 240
>gi|4504981 galectin-1 [Homo sapiens]
Length = 135
Score = 67.0 bits (162), Expect = 1e-11
Identities = 35/122 (28%), Positives = 65/122 (53%), Gaps = 3/122 (2%)
Query: 128 PRMLITILGTVKPNANRIALDFQR-GNDVAFHFNPRFNEN-NRRVIVCNTKLDNNWGREE 185
P + + G V P+A L+ + N++ HFNPRFN + + IVCN+K WG E+
Sbjct: 14 PGECLRVRGEVAPDAKSFVLNLGKDSNNLCLHFNPRFNAHGDANTIVCNSKDGGAWGTEQ 73
Query: 186 RQSVFPFESGKPFKIQVLVEPDHFKVAVNDAHLLQYNHRVKKLNEISKLGISGDIDLTSA 245
R++VFPF+ G ++ + + + V + D + ++ +R+ L I+ + GD +
Sbjct: 74 REAVFPFQPGSVAEVCITFDQANLTVKLPDGYEFKFPNRL-NLEAINYMAADGDFKIKCV 132
Query: 246 SY 247
++
Sbjct: 133 AF 134
>gi|15890086 type IV collagen alpha 5 isoform 2 precursor [Homo
sapiens]
Length = 1691
Score = 66.6 bits (161), Expect = 2e-11
Identities = 47/118 (39%), Positives = 51/118 (43%), Gaps = 8/118 (6%)
Query: 14 SGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPG-QAPPGAYPGQAPPGA-YPGAPG--- 68
+G P P G PG G G G PG P PG PG PPG PG PG
Sbjct: 804 NGQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPPGERG 863
Query: 69 --AYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPG 124
PGAP P PG P PG +SG P G GP G P GPL +P +PG
Sbjct: 864 SPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPG-PPGPLGIPGRSGVPG 920
Score = 57.4 bits (137), Expect = 1e-08
Identities = 40/110 (36%), Positives = 44/110 (40%), Gaps = 12/110 (10%)
Query: 14 SGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPG-AYPG 72
SG P G PG G P G GG+PG P G+ PG A PG PG PG
Sbjct: 1136 SGPPGNPGLPGEPG--PVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPG 1193
Query: 73 APA-PGV--------YPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGP 113
P PG+ PG P PG G+P G GP G P P
Sbjct: 1194 PPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSP 1243
Score = 57.0 bits (136), Expect = 2e-08
Identities = 47/123 (38%), Positives = 52/123 (42%), Gaps = 14/123 (11%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGA---SYPGAYPGQAPPGAYPGQAPPGAYPGAPG--A 69
G P P+G+PG G P GA G PG P PG P PG A PG PG PG
Sbjct: 710 GPPGPKGFPGIPG--PPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFALPGP-PGPPGLPG 766
Query: 70 YPGAPAPGV---YPGPPSGPGAYPSSGQPSATGAYPATG---PYGAPAGPLIVPYNLPLP 123
+ GA P +PGPP PG G P G G P G P P I P P
Sbjct: 767 FKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPGP 826
Query: 124 GGV 126
G+
Sbjct: 827 PGI 829
Score = 56.6 bits (135), Expect = 2e-08
Identities = 49/130 (37%), Positives = 55/130 (42%), Gaps = 20/130 (15%)
Query: 7 LHDALSGSGNPNPQGWPGAWGNQPAGAGGYPGA-SYPGAYPGQAPPG----AYPGQAPPG 61
L + G P PQG G G P+G G PG+ PG + PG PG P
Sbjct: 1025 LKGTIGDMGFPGPQGVEGPPG--PSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPK 1082
Query: 62 AYPGAPGAYPGAPA-------PGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPL 114
PG PG YPG P PG+ PG P PGA G P G GP G +GP
Sbjct: 1083 GEPGLPG-YPGNPGIKGSVGDPGL-PGLPGTPGAKGQPGLPGFPGTPGPPGPKGI-SGP- 1138
Query: 115 IVPYNLPLPG 124
P N LPG
Sbjct: 1139 --PGNPGLPG 1146
Score = 54.3 bits (129), Expect = 1e-07
Identities = 35/100 (35%), Positives = 38/100 (38%), Gaps = 1/100 (1%)
Query: 15 GNPNPQGWPGAWGNQPA-GAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGA 73
GNP G G G+ G G+PG P PG A P PG P PG PG +
Sbjct: 1315 GNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPPGPPGLPGPSGQS 1374
Query: 74 PAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGP 113
GPP PG G P G GP G P P
Sbjct: 1375 IIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDP 1414
Score = 53.1 bits (126), Expect = 2e-07
Identities = 39/111 (35%), Positives = 44/111 (39%), Gaps = 7/111 (6%)
Query: 15 GNPNPQGWPGAWGNQ-PAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGA 73
G P G+PG G P G G PG PG G +PGQ P G PG G
Sbjct: 1116 GQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPG-QDGI 1174
Query: 74 PAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPG 124
P P G P PG + + G P G G G P +P N LPG
Sbjct: 1175 PGPAGQKGEPGQPG-FGNPGPPGLPGLSGQKGDGGLPG----IPGNPGLPG 1220
Score = 51.6 bits (122), Expect = 6e-07
Identities = 45/119 (37%), Positives = 52/119 (43%), Gaps = 24/119 (20%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPG-QAPPGAYPGQAPPG--AYPGAPGAYP 71
G P PQG PG G + G G+PG+ PG +PG Q PPG PPG G PG+
Sbjct: 114 GAPGPQGIPGCNGTK--GERGFPGS--PG-FPGLQGPPG------PPGIPGMKGEPGSII 162
Query: 72 GAPAPGV-----YPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPGG 125
+ PG YPGPP G +G P G G G P P LP P G
Sbjct: 163 MSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPIGPPGPPGLMGPPGPP-----GLPGPKG 216
Score = 50.8 bits (120), Expect = 1e-06
Identities = 35/111 (31%), Positives = 41/111 (36%), Gaps = 7/111 (6%)
Query: 9 DALSG-SGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAP 67
D + G +G G PG P G G G G PG PG + G P
Sbjct: 1172 DGIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFP 1231
Query: 68 GAY-----PGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGP 113
G PG+P P + GP PG G+P TG GP G P P
Sbjct: 1232 GVQGPPGPPGSPGPAL-EGPKGNPGPQGPPGRPGPTGFQGLPGPEGPPGLP 1281
Score = 50.4 bits (119), Expect = 1e-06
Identities = 46/122 (37%), Positives = 48/122 (39%), Gaps = 21/122 (17%)
Query: 15 GNPNPQGWPGAWG-NQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGA 73
G P QG PG G N G G PG PG +PG P PG A P PG G
Sbjct: 1309 GPPGLQGNPGRPGLNGMKGDPGLPGV--PG-FPGMKGPSGVPGSAGPEGEPGLIGP---- 1361
Query: 74 PAPGVYPGP---------PSGPGAYPSSGQPSATGAYPATGPYG--APAGPLIVPYNLPL 122
P P PGP +GP P GQP G GP G P GP P L
Sbjct: 1362 PGPPGLPGPSGQSIIIKGDAGPPGIP--GQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGL 1419
Query: 123 PG 124
PG
Sbjct: 1420 PG 1421
Score = 49.3 bits (116), Expect = 3e-06
Identities = 35/103 (33%), Positives = 37/103 (35%), Gaps = 4/103 (3%)
Query: 13 GSGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPG--AY 70
G +PN G G G G G PG S P Y G PG + PG PG
Sbjct: 953 GPMDPNLLGSKGEKGEP--GLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGN 1010
Query: 71 PGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGP 113
PG P GPP G G P G GP G P P
Sbjct: 1011 PGLPGQPGLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQP 1053
Score = 48.1 bits (113), Expect = 7e-06
Identities = 41/112 (36%), Positives = 46/112 (41%), Gaps = 19/112 (16%)
Query: 14 SGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGA 73
SG P G PG G P G+ G+PG G P PG PGA PGAPG +PG+
Sbjct: 490 SGPPGQPGLPGLPG--PPGSLGFPGQKGEKGQAGATGPKGLPGI--PGA-PGAPG-FPGS 543
Query: 74 PA-PG---VYPG---------PPSGPGAYPSSGQPSATGAYPATGPYGAPAG 112
PG +PG P PG G P G GP G P G
Sbjct: 544 KGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGG 595
Score = 48.1 bits (113), Expect = 7e-06
Identities = 41/114 (35%), Positives = 46/114 (40%), Gaps = 15/114 (13%)
Query: 4 NFSLHDALSGSGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPG-- 61
N + ++ G P G PGA G QP G G+PG PG PPG PPG
Sbjct: 1093 NPGIKGSVGDPGLPGLPGTPGAKG-QP-GLPGFPGT------PG--PPGPKGISGPPGNP 1142
Query: 62 AYPGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATG--AYPATGPYGAPAGP 113
PG PG G PG PGPP G G P G P +G P P
Sbjct: 1143 GLPGEPGPVGGGGHPG-QPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPP 1195
Score = 47.8 bits (112), Expect = 9e-06
Identities = 36/115 (31%), Positives = 44/115 (38%), Gaps = 17/115 (14%)
Query: 15 GNPNPQGWPGAWGNQ----------PAGAGGYPGA-SYPGAYPGQAPPGAYPGQAPPGAY 63
G P P+G PG G + P G G PG +PG PG + G P
Sbjct: 63 GFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGT-PGLPGMPGHDGAPGPQGI 121
Query: 64 PGAPGA-----YPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGP 113
PG G +PG+P GPP PG G+P + GP G P P
Sbjct: 122 PGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYP 176
Score = 47.8 bits (112), Expect = 9e-06
Identities = 42/140 (30%), Positives = 46/140 (32%), Gaps = 42/140 (30%)
Query: 15 GNPNPQGWPGAWGNQ------------PAGAGGYPGASYPGAYPGQAPPGAYPGQ----- 57
G P P G+PG G + P G G PGA PG A P P
Sbjct: 394 GPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEP 453
Query: 58 APPGAYPGAPG------------------------AYPGAPAPGVYPGPPSGPGAYPSSG 93
PPG PG+PG G P PG P PG+ G
Sbjct: 454 GPPGP-PGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLGFPG 512
Query: 94 QPSATGAYPATGPYGAPAGP 113
Q G ATGP G P P
Sbjct: 513 QKGEKGQAGATGPKGLPGIP 532
Score = 47.0 bits (110), Expect = 2e-05
Identities = 41/120 (34%), Positives = 47/120 (39%), Gaps = 18/120 (15%)
Query: 7 LHDALSGSGNPNPQGW--PGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYP 64
LH G+P P G PG G + G+ G PGA P PG PG PG+A +P
Sbjct: 838 LHGIPGEKGDPGPPGLDVPGPPGER--GSPGIPGAPGPIGPPGS--PGL-PGKAGASGFP 892
Query: 65 GAPGAY-----PGAPAPGVYPGPPSGPGAYPSSGQ------PSATGAYPATGPYGAPAGP 113
G G PG P P PG PG G P TG + G G P P
Sbjct: 893 GTKGEMGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPP 952
Score = 46.6 bits (109), Expect = 2e-05
Identities = 40/120 (33%), Positives = 45/120 (37%), Gaps = 23/120 (19%)
Query: 14 SGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPG----QAPPG--AYPGAP 67
SG P G PG GN G G PG P G +PG + PPG PG P
Sbjct: 996 SGQPGLPGPPGPKGNP--GLPGQPGLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQP 1053
Query: 68 GAYPGAPA-------PGV-------YPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGP 113
G+ PG P PG+ PGP PG G P G+ G G P P
Sbjct: 1054 GS-PGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTP 1112
Score = 46.6 bits (109), Expect = 2e-05
Identities = 34/101 (33%), Positives = 35/101 (34%), Gaps = 7/101 (6%)
Query: 15 GNPNPQGWPGAWGNQ-----PAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPG- 68
G P P G PG G AG G PG PG P PG P PG G
Sbjct: 1360 GPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGL 1419
Query: 69 -AYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYG 108
+ GA PG P PG G P G GP G
Sbjct: 1420 PGFDGAGGRKGDPGLPGQPGTRGLDGPPGPDGLQGPPGPPG 1460
Score = 46.2 bits (108), Expect = 3e-05
Identities = 36/103 (34%), Positives = 41/103 (39%), Gaps = 6/103 (5%)
Query: 15 GNPNPQGWPGAWG-NQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGA 73
G+ QG PG G G+ G PG P PG P + G PG PG PG
Sbjct: 923 GDDGLQGQPGLPGPTGEKGSKGEPGLPGP---PGPMDPNLLGSKGEKGE-PGLPGI-PGV 977
Query: 74 PAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIV 116
P Y G P PG SGQP G G G P P ++
Sbjct: 978 SGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLI 1020
Score = 45.1 bits (105), Expect = 6e-05
Identities = 41/125 (32%), Positives = 47/125 (37%), Gaps = 26/125 (20%)
Query: 15 GNPNPQGWPGAWGNQ-------PAGAGGYPGASYPGAYPG-QAPPG---AYPGQ------ 57
G P G+PG G + P G G PGA +PG + PG +PG
Sbjct: 503 GPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGEPGDILTFPGMKGDKGE 562
Query: 58 -APPGA-----YPGAPG--AYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGA 109
PGA PG PG PG P P PG + G G P G GP G
Sbjct: 563 LGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGITFKGERGPPGNPGLPGLPGNIGPMGP 622
Query: 110 PA-GP 113
P GP
Sbjct: 623 PGFGP 627
Score = 45.1 bits (105), Expect = 6e-05
Identities = 39/113 (34%), Positives = 43/113 (38%), Gaps = 7/113 (6%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPG--AYPGAPGAYPG 72
G P P+G PG G G G PG PG P PG PPG G G
Sbjct: 585 GLPGPKGEPG--GITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGN 642
Query: 73 APAPGVYPGPPSGPG-AYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPG 124
PG+ PGP PG G+P G G G P P + P LPG
Sbjct: 643 PGQPGI-PGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGL-PGQPGLPG 693
Score = 44.3 bits (103), Expect = 1e-04
Identities = 48/141 (34%), Positives = 55/141 (39%), Gaps = 36/141 (25%)
Query: 15 GNPNPQGWPGAWGNQ---PAGAGGYPGASYPGAYPGQAPPG-AYPGQAPPG--AYPGAPG 68
G P G PG G P G G+PG G + PPG + PG PPG PGAPG
Sbjct: 377 GIQGPPGLPGPPGAAVMGPPGPPGFPGER--GQKGDEGPPGISIPG--PPGLDGQPGAPG 432
Query: 69 AYPGAPAP-GVY------------PGPPSGPGAYPSSGQPSATGAYPAT----------G 105
PG P P G + PGPP PG G+ G T G
Sbjct: 433 -LPGPPGPAGPHIPPSDEICEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISG 491
Query: 106 PYGAPAGPLI--VPYNLPLPG 124
P G P P + P +L PG
Sbjct: 492 PPGQPGLPGLPGPPGSLGFPG 512
Score = 44.3 bits (103), Expect = 1e-04
Identities = 56/177 (31%), Positives = 60/177 (33%), Gaps = 52/177 (29%)
Query: 15 GNPNPQGWPGAWGNQ-PAGAG-----------------GYPGASYPGAYPGQ--APPG-- 52
GNP G PG G P G G G PG P PGQ PG
Sbjct: 606 GNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKP 665
Query: 53 ------------------AYPGQ----APPGA--YPGAPG-AYPGAPAPGVYPGPPSGPG 87
PGQ PG+ PG PG PG P P +PG P PG
Sbjct: 666 GLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGIPGPPG 725
Query: 88 AYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPGGVVPRMLITILGTVKPNANR 144
A G P G GP G P GP P LPG P L G + P +R
Sbjct: 726 A---PGTPGRIGLEGPPGPPGFP-GPKGEP-GFALPGPPGPPGLPGFKGALGPKGDR 777
Score = 43.9 bits (102), Expect = 1e-04
Identities = 33/111 (29%), Positives = 37/111 (33%), Gaps = 2/111 (1%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGAP 74
G P +G PG G G G PG YPG+ GQ PG PG P
Sbjct: 292 GEPGKRGKPGKDGEN--GQPGIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRP 349
Query: 75 APGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPGG 125
G+ G G G+ G GP G P P P P G
Sbjct: 350 GTGITIGEKGNIGLPGLPGEKGERGFPGIQGPPGLPGPPGAAVMGPPGPPG 400
Score = 43.1 bits (100), Expect = 2e-04
Identities = 44/127 (34%), Positives = 46/127 (36%), Gaps = 11/127 (8%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGASYPGAY-PGQAPPGAYPGQAPPGAYPG--APGAYP 71
G+ P+G PG G P G G PG S G A P PGQ PG P P
Sbjct: 1348 GSAGPEGEPGLIG--PPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLP 1405
Query: 72 GAPAPGVYPGP---PSGPGAYPSSGQPSATGAYPATGPYGAPAGP--LIVPYNLPLPGGV 126
G P PG P GA G P G P T P GP L P P V
Sbjct: 1406 GPTGPPGDPGRNGLPGFDGAGGRKGDPGLPG-QPGTRGLDGPPGPDGLQGPPGPPGTSSV 1464
Query: 127 VPRMLIT 133
LIT
Sbjct: 1465 AHGFLIT 1471
Score = 42.7 bits (99), Expect = 3e-04
Identities = 44/150 (29%), Positives = 47/150 (31%), Gaps = 45/150 (30%)
Query: 15 GNPNPQGWPGAWGNQ---------------------PAGAGGYPGASYPGAYPGQAP--- 50
G P QG PG G+ P G G PG P PG
Sbjct: 1229 GFPGVQGPPGPPGSPGPALEGPKGNPGPQGPPGRPGPTGFQGLPGPEGPPGLPGNGGIKG 1288
Query: 51 -------------PGAYPGQAPPG--AYPGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQP 95
PG Q PPG PG PG PG+ PG P PG SG P
Sbjct: 1289 EKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGL-PGVPGFPGMKGPSGVP 1347
Query: 96 SATGAYPATGPYGAPAGPLIVPYNLPLPGG 125
+ G G G P P LP P G
Sbjct: 1348 GSAGPEGEPGLIGPPGPP-----GLPGPSG 1372
Score = 42.4 bits (98), Expect = 4e-04
Identities = 29/79 (36%), Positives = 31/79 (39%), Gaps = 4/79 (5%)
Query: 32 GAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGAPAPGVYPGPPSGPGAYPS 91
G G+PG PG P PG P G G PG P P GPP PG +
Sbjct: 48 GERGFPGLEGHPGLPGFPGPEGPPG---PRGQKGDDGI-PGPPGPKGIRGPPGLPGFPGT 103
Query: 92 SGQPSATGAYPATGPYGAP 110
G P G A GP G P
Sbjct: 104 PGLPGMPGHDGAPGPQGIP 122
Score = 42.4 bits (98), Expect = 4e-04
Identities = 43/146 (29%), Positives = 46/146 (31%), Gaps = 45/146 (30%)
Query: 15 GNPNPQGWPGAWGNQ------PAGAGGYPGASYPGAYPGQAP-----------------P 51
G P P G PG GN P G G G P PGQ P
Sbjct: 204 GPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEFQKGDQGLP 263
Query: 52 GAYPGQAPPGAY--PGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATG-----AYPA- 103
G PPG PG PG G PG PG +GQP G YP
Sbjct: 264 GDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLPGDPGYPGE 323
Query: 104 ------------TGPYGAPAGPLIVP 117
TGP G P L++P
Sbjct: 324 PGRDGEKGQKGDTGPPGPPG--LVIP 347
Score = 42.0 bits (97), Expect = 5e-04
Identities = 36/106 (33%), Positives = 36/106 (33%), Gaps = 18/106 (16%)
Query: 15 GNPNPQGWPGAWGNQ----------PAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYP 64
G P P G PG G P G GYPG P G P PG P P
Sbjct: 144 GPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPG---PPGIQGLPGPTGIPGPIGP---P 197
Query: 65 GAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAP 110
G PG G P P PGP G G G GP G P
Sbjct: 198 GPPGLM-GPPGPPGLPGPKGNMG-LNFQGPKGEKGEQGLQGPPGPP 241
Score = 41.2 bits (95), Expect = 9e-04
Identities = 40/115 (34%), Positives = 46/115 (40%), Gaps = 20/115 (17%)
Query: 15 GNPNPQGWPGAWG--NQPA--GAGGYPGA-SYPGAYPGQAPPG--AYPGQ-APPG--AYP 64
G P P+G PG G P G+ G PG PG + PG +PG PPG
Sbjct: 1077 GLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGIS 1136
Query: 65 GAPGAYPGAPAP------GVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGP 113
G PG PG P G +PG P PG G+P G G G P P
Sbjct: 1137 GPPGN-PGLPGEPGPVGGGGHPGQPGPPG---EKGKPGQDGIPGPAGQKGEPGQP 1187
Score = 38.1 bits (87), Expect = 0.007
Identities = 43/140 (30%), Positives = 48/140 (34%), Gaps = 43/140 (30%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPG----------------AYPGQA 58
G P G+PG G G G G + P PG P PG+
Sbjct: 313 GLPGDPGYPGEPGRD--GEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGEK 370
Query: 59 PPGAYPG--APGAYPGAPAPGVY--PGPPSGPG-------------AYPS----SGQPSA 97
+PG P PG P V PGPP PG + P GQP A
Sbjct: 371 GERGFPGIQGPPGLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGA 430
Query: 98 TGAYPATGPYGAPAGPLIVP 117
G GP G PAGP I P
Sbjct: 431 PG---LPGPPG-PAGPHIPP 446
Score = 35.0 bits (79), Expect = 0.061
Identities = 29/88 (32%), Positives = 34/88 (38%), Gaps = 6/88 (6%)
Query: 26 WGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGAPAPGVYPGPPSG 85
WG QPA A G S PG+ + G+ +PG G +PG P GPP
Sbjct: 20 WG-QPAEAAACYGCS-PGS---KCDCSGIKGEKGERGFPGLEG-HPGLPGFPGPEGPPGP 73
Query: 86 PGAYPSSGQPSATGAYPATGPYGAPAGP 113
G G P G GP G P P
Sbjct: 74 RGQKGDDGIPGPPGPKGIRGPPGLPGFP 101
>gi|4502955 type IV collagen alpha 5 isoform 1 precursor [Homo
sapiens]
Length = 1685
Score = 66.6 bits (161), Expect = 2e-11
Identities = 47/118 (39%), Positives = 51/118 (43%), Gaps = 8/118 (6%)
Query: 14 SGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPG-QAPPGAYPGQAPPGA-YPGAPG--- 68
+G P P G PG G G G PG P PG PG PPG PG PG
Sbjct: 804 NGQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPPGERG 863
Query: 69 --AYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPG 124
PGAP P PG P PG +SG P G GP G P GPL +P +PG
Sbjct: 864 SPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPG-PPGPLGIPGRSGVPG 920
Score = 57.4 bits (137), Expect = 1e-08
Identities = 40/110 (36%), Positives = 44/110 (40%), Gaps = 12/110 (10%)
Query: 14 SGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPG-AYPG 72
SG P G PG G P G GG+PG P G+ PG A PG PG PG
Sbjct: 1136 SGPPGNPGLPGEPG--PVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPG 1193
Query: 73 APA-PGV--------YPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGP 113
P PG+ PG P PG G+P G GP G P P
Sbjct: 1194 PPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSP 1243
Score = 57.0 bits (136), Expect = 2e-08
Identities = 47/123 (38%), Positives = 52/123 (42%), Gaps = 14/123 (11%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGA---SYPGAYPGQAPPGAYPGQAPPGAYPGAPG--A 69
G P P+G+PG G P GA G PG P PG P PG A PG PG PG
Sbjct: 710 GPPGPKGFPGIPG--PPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFALPGP-PGPPGLPG 766
Query: 70 YPGAPAPGV---YPGPPSGPGAYPSSGQPSATGAYPATG---PYGAPAGPLIVPYNLPLP 123
+ GA P +PGPP PG G P G G P G P P I P P
Sbjct: 767 FKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPGP 826
Query: 124 GGV 126
G+
Sbjct: 827 PGI 829
Score = 56.6 bits (135), Expect = 2e-08
Identities = 49/130 (37%), Positives = 55/130 (42%), Gaps = 20/130 (15%)
Query: 7 LHDALSGSGNPNPQGWPGAWGNQPAGAGGYPGA-SYPGAYPGQAPPG----AYPGQAPPG 61
L + G P PQG G G P+G G PG+ PG + PG PG P
Sbjct: 1025 LKGTIGDMGFPGPQGVEGPPG--PSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPK 1082
Query: 62 AYPGAPGAYPGAPA-------PGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPL 114
PG PG YPG P PG+ PG P PGA G P G GP G +GP
Sbjct: 1083 GEPGLPG-YPGNPGIKGSVGDPGL-PGLPGTPGAKGQPGLPGFPGTPGPPGPKGI-SGP- 1138
Query: 115 IVPYNLPLPG 124
P N LPG
Sbjct: 1139 --PGNPGLPG 1146
Score = 54.3 bits (129), Expect = 1e-07
Identities = 35/100 (35%), Positives = 38/100 (38%), Gaps = 1/100 (1%)
Query: 15 GNPNPQGWPGAWGNQPA-GAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGA 73
GNP G G G+ G G+PG P PG A P PG P PG PG +
Sbjct: 1309 GNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPPGPPGLPGPSGQS 1368
Query: 74 PAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGP 113
GPP PG G P G GP G P P
Sbjct: 1369 IIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDP 1408
Score = 53.1 bits (126), Expect = 2e-07
Identities = 39/111 (35%), Positives = 44/111 (39%), Gaps = 7/111 (6%)
Query: 15 GNPNPQGWPGAWGNQ-PAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGA 73
G P G+PG G P G G PG PG G +PGQ P G PG G
Sbjct: 1116 GQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPG-QDGI 1174
Query: 74 PAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPG 124
P P G P PG + + G P G G G P +P N LPG
Sbjct: 1175 PGPAGQKGEPGQPG-FGNPGPPGLPGLSGQKGDGGLPG----IPGNPGLPG 1220
Score = 51.6 bits (122), Expect = 6e-07
Identities = 45/119 (37%), Positives = 52/119 (43%), Gaps = 24/119 (20%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPG-QAPPGAYPGQAPPG--AYPGAPGAYP 71
G P PQG PG G + G G+PG+ PG +PG Q PPG PPG G PG+
Sbjct: 114 GAPGPQGIPGCNGTK--GERGFPGS--PG-FPGLQGPPG------PPGIPGMKGEPGSII 162
Query: 72 GAPAPGV-----YPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPGG 125
+ PG YPGPP G +G P G G G P P LP P G
Sbjct: 163 MSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPIGPPGPPGLMGPPGPP-----GLPGPKG 216
Score = 50.4 bits (119), Expect = 1e-06
Identities = 46/122 (37%), Positives = 48/122 (39%), Gaps = 21/122 (17%)
Query: 15 GNPNPQGWPGAWG-NQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGA 73
G P QG PG G N G G PG PG +PG P PG A P PG G
Sbjct: 1303 GPPGLQGNPGRPGLNGMKGDPGLPGV--PG-FPGMKGPSGVPGSAGPEGEPGLIGP---- 1355
Query: 74 PAPGVYPGP---------PSGPGAYPSSGQPSATGAYPATGPYG--APAGPLIVPYNLPL 122
P P PGP +GP P GQP G GP G P GP P L
Sbjct: 1356 PGPPGLPGPSGQSIIIKGDAGPPGIP--GQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGL 1413
Query: 123 PG 124
PG
Sbjct: 1414 PG 1415
Score = 49.3 bits (116), Expect = 3e-06
Identities = 35/103 (33%), Positives = 37/103 (35%), Gaps = 4/103 (3%)
Query: 13 GSGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPG--AY 70
G +PN G G G G G PG S P Y G PG + PG PG
Sbjct: 953 GPMDPNLLGSKGEKGEP--GLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGN 1010
Query: 71 PGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGP 113
PG P GPP G G P G GP G P P
Sbjct: 1011 PGLPGQPGLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQP 1053
Score = 48.1 bits (113), Expect = 7e-06
Identities = 41/112 (36%), Positives = 46/112 (41%), Gaps = 19/112 (16%)
Query: 14 SGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGA 73
SG P G PG G P G+ G+PG G P PG PGA PGAPG +PG+
Sbjct: 490 SGPPGQPGLPGLPG--PPGSLGFPGQKGEKGQAGATGPKGLPGI--PGA-PGAPG-FPGS 543
Query: 74 PA-PG---VYPG---------PPSGPGAYPSSGQPSATGAYPATGPYGAPAG 112
PG +PG P PG G P G GP G P G
Sbjct: 544 KGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGG 595
Score = 48.1 bits (113), Expect = 7e-06
Identities = 41/114 (35%), Positives = 46/114 (40%), Gaps = 15/114 (13%)
Query: 4 NFSLHDALSGSGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPG-- 61
N + ++ G P G PGA G QP G G+PG PG PPG PPG
Sbjct: 1093 NPGIKGSVGDPGLPGLPGTPGAKG-QP-GLPGFPGT------PG--PPGPKGISGPPGNP 1142
Query: 62 AYPGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATG--AYPATGPYGAPAGP 113
PG PG G PG PGPP G G P G P +G P P
Sbjct: 1143 GLPGEPGPVGGGGHPG-QPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPP 1195
Score = 47.8 bits (112), Expect = 9e-06
Identities = 36/115 (31%), Positives = 44/115 (38%), Gaps = 17/115 (14%)
Query: 15 GNPNPQGWPGAWGNQ----------PAGAGGYPGA-SYPGAYPGQAPPGAYPGQAPPGAY 63
G P P+G PG G + P G G PG +PG PG + G P
Sbjct: 63 GFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGT-PGLPGMPGHDGAPGPQGI 121
Query: 64 PGAPGA-----YPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGP 113
PG G +PG+P GPP PG G+P + GP G P P
Sbjct: 122 PGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYP 176
Score = 47.8 bits (112), Expect = 9e-06
Identities = 42/140 (30%), Positives = 46/140 (32%), Gaps = 42/140 (30%)
Query: 15 GNPNPQGWPGAWGNQ------------PAGAGGYPGASYPGAYPGQAPPGAYPGQ----- 57
G P P G+PG G + P G G PGA PG A P P
Sbjct: 394 GPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEP 453
Query: 58 APPGAYPGAPG------------------------AYPGAPAPGVYPGPPSGPGAYPSSG 93
PPG PG+PG G P PG P PG+ G
Sbjct: 454 GPPGP-PGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLGFPG 512
Query: 94 QPSATGAYPATGPYGAPAGP 113
Q G ATGP G P P
Sbjct: 513 QKGEKGQAGATGPKGLPGIP 532
Score = 47.4 bits (111), Expect = 1e-05
Identities = 42/123 (34%), Positives = 48/123 (39%), Gaps = 19/123 (15%)
Query: 9 DALSG-SGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAP 67
D + G +G G PG P G G G G PG PG PG P PG
Sbjct: 1172 DGIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQKGDGGLPG--IPG-NPGLPGPKGEPGFH 1228
Query: 68 GAYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIV----PYNLPLP 123
G +PG P PGPP PG P+ G GP G P P + P LP
Sbjct: 1229 G-FPGVQGP---PGPPGSPG-------PALEGPKGNPGPQGPPGRPGLPGPEGPPGLPGN 1277
Query: 124 GGV 126
GG+
Sbjct: 1278 GGI 1280
Score = 47.0 bits (110), Expect = 2e-05
Identities = 41/120 (34%), Positives = 47/120 (39%), Gaps = 18/120 (15%)
Query: 7 LHDALSGSGNPNPQGW--PGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYP 64
LH G+P P G PG G + G+ G PGA P PG PG PG+A +P
Sbjct: 838 LHGIPGEKGDPGPPGLDVPGPPGER--GSPGIPGAPGPIGPPGS--PGL-PGKAGASGFP 892
Query: 65 GAPGAY-----PGAPAPGVYPGPPSGPGAYPSSGQ------PSATGAYPATGPYGAPAGP 113
G G PG P P PG PG G P TG + G G P P
Sbjct: 893 GTKGEMGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPP 952
Score = 46.6 bits (109), Expect = 2e-05
Identities = 40/120 (33%), Positives = 45/120 (37%), Gaps = 23/120 (19%)
Query: 14 SGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPG----QAPPG--AYPGAP 67
SG P G PG GN G G PG P G +PG + PPG PG P
Sbjct: 996 SGQPGLPGPPGPKGNP--GLPGQPGLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQP 1053
Query: 68 GAYPGAPA-------PGV-------YPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGP 113
G+ PG P PG+ PGP PG G P G+ G G P P
Sbjct: 1054 GS-PGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTP 1112
Score = 46.6 bits (109), Expect = 2e-05
Identities = 36/101 (35%), Positives = 38/101 (37%), Gaps = 11/101 (10%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPG--AYPG 72
G P G+PG G P G G PG + G P G Q PPG PG PG PG
Sbjct: 1223 GEPGFHGFPGVQG--PPGPPGSPGPALEG------PKGNPGPQGPPGR-PGLPGPEGPPG 1273
Query: 73 APAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGP 113
P G G PG G P G G G P P
Sbjct: 1274 LPGNGGIKGEKGNPGQPGLPGLPGLKGDQGPPGLQGNPGRP 1314
Score = 46.6 bits (109), Expect = 2e-05
Identities = 34/101 (33%), Positives = 35/101 (34%), Gaps = 7/101 (6%)
Query: 15 GNPNPQGWPGAWGNQ-----PAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPG- 68
G P P G PG G AG G PG PG P PG P PG G
Sbjct: 1354 GPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGL 1413
Query: 69 -AYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYG 108
+ GA PG P PG G P G GP G
Sbjct: 1414 PGFDGAGGRKGDPGLPGQPGTRGLDGPPGPDGLQGPPGPPG 1454
Score = 46.2 bits (108), Expect = 3e-05
Identities = 36/103 (34%), Positives = 41/103 (39%), Gaps = 6/103 (5%)
Query: 15 GNPNPQGWPGAWG-NQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGA 73
G+ QG PG G G+ G PG P PG P + G PG PG PG
Sbjct: 923 GDDGLQGQPGLPGPTGEKGSKGEPGLPGP---PGPMDPNLLGSKGEKGE-PGLPGI-PGV 977
Query: 74 PAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIV 116
P Y G P PG SGQP G G G P P ++
Sbjct: 978 SGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLI 1020
Score = 45.1 bits (105), Expect = 6e-05
Identities = 41/125 (32%), Positives = 47/125 (37%), Gaps = 26/125 (20%)
Query: 15 GNPNPQGWPGAWGNQ-------PAGAGGYPGASYPGAYPG-QAPPG---AYPGQ------ 57
G P G+PG G + P G G PGA +PG + PG +PG
Sbjct: 503 GPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGEPGDILTFPGMKGDKGE 562
Query: 58 -APPGA-----YPGAPG--AYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGA 109
PGA PG PG PG P P PG + G G P G GP G
Sbjct: 563 LGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGITFKGERGPPGNPGLPGLPGNIGPMGP 622
Query: 110 PA-GP 113
P GP
Sbjct: 623 PGFGP 627
Score = 45.1 bits (105), Expect = 6e-05
Identities = 39/113 (34%), Positives = 43/113 (38%), Gaps = 7/113 (6%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPG--AYPGAPGAYPG 72
G P P+G PG G G G PG PG P PG PPG G G
Sbjct: 585 GLPGPKGEPG--GITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGN 642
Query: 73 APAPGVYPGPPSGPG-AYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPG 124
PG+ PGP PG G+P G G G P P + P LPG
Sbjct: 643 PGQPGI-PGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGL-PGQPGLPG 693
Score = 44.3 bits (103), Expect = 1e-04
Identities = 48/141 (34%), Positives = 55/141 (39%), Gaps = 36/141 (25%)
Query: 15 GNPNPQGWPGAWGNQ---PAGAGGYPGASYPGAYPGQAPPG-AYPGQAPPG--AYPGAPG 68
G P G PG G P G G+PG G + PPG + PG PPG PGAPG
Sbjct: 377 GIQGPPGLPGPPGAAVMGPPGPPGFPGER--GQKGDEGPPGISIPG--PPGLDGQPGAPG 432
Query: 69 AYPGAPAP-GVY------------PGPPSGPGAYPSSGQPSATGAYPAT----------G 105
PG P P G + PGPP PG G+ G T G
Sbjct: 433 -LPGPPGPAGPHIPPSDEICEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISG 491
Query: 106 PYGAPAGPLI--VPYNLPLPG 124
P G P P + P +L PG
Sbjct: 492 PPGQPGLPGLPGPPGSLGFPG 512
Score = 44.3 bits (103), Expect = 1e-04
Identities = 56/177 (31%), Positives = 60/177 (33%), Gaps = 52/177 (29%)
Query: 15 GNPNPQGWPGAWGNQ-PAGAG-----------------GYPGASYPGAYPGQ--APPG-- 52
GNP G PG G P G G G PG P PGQ PG
Sbjct: 606 GNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKP 665
Query: 53 ------------------AYPGQ----APPGA--YPGAPG-AYPGAPAPGVYPGPPSGPG 87
PGQ PG+ PG PG PG P P +PG P PG
Sbjct: 666 GLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGIPGPPG 725
Query: 88 AYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPGGVVPRMLITILGTVKPNANR 144
A G P G GP G P GP P LPG P L G + P +R
Sbjct: 726 A---PGTPGRIGLEGPPGPPGFP-GPKGEP-GFALPGPPGPPGLPGFKGALGPKGDR 777
Score = 43.9 bits (102), Expect = 1e-04
Identities = 33/111 (29%), Positives = 37/111 (33%), Gaps = 2/111 (1%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGAP 74
G P +G PG G G G PG YPG+ GQ PG PG P
Sbjct: 292 GEPGKRGKPGKDGEN--GQPGIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRP 349
Query: 75 APGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPGG 125
G+ G G G+ G GP G P P P P G
Sbjct: 350 GTGITIGEKGNIGLPGLPGEKGERGFPGIQGPPGLPGPPGAAVMGPPGPPG 400
Score = 43.1 bits (100), Expect = 2e-04
Identities = 44/127 (34%), Positives = 46/127 (36%), Gaps = 11/127 (8%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGASYPGAY-PGQAPPGAYPGQAPPGAYPG--APGAYP 71
G+ P+G PG G P G G PG S G A P PGQ PG P P
Sbjct: 1342 GSAGPEGEPGLIG--PPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLP 1399
Query: 72 GAPAPGVYPGP---PSGPGAYPSSGQPSATGAYPATGPYGAPAGP--LIVPYNLPLPGGV 126
G P PG P GA G P G P T P GP L P P V
Sbjct: 1400 GPTGPPGDPGRNGLPGFDGAGGRKGDPGLPG-QPGTRGLDGPPGPDGLQGPPGPPGTSSV 1458
Query: 127 VPRMLIT 133
LIT
Sbjct: 1459 AHGFLIT 1465
Score = 42.4 bits (98), Expect = 4e-04
Identities = 29/79 (36%), Positives = 31/79 (39%), Gaps = 4/79 (5%)
Query: 32 GAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGAPAPGVYPGPPSGPGAYPS 91
G G+PG PG P PG P G G PG P P GPP PG +
Sbjct: 48 GERGFPGLEGHPGLPGFPGPEGPPG---PRGQKGDDGI-PGPPGPKGIRGPPGLPGFPGT 103
Query: 92 SGQPSATGAYPATGPYGAP 110
G P G A GP G P
Sbjct: 104 PGLPGMPGHDGAPGPQGIP 122
Score = 42.4 bits (98), Expect = 4e-04
Identities = 43/146 (29%), Positives = 46/146 (31%), Gaps = 45/146 (30%)
Query: 15 GNPNPQGWPGAWGNQ------PAGAGGYPGASYPGAYPGQAP-----------------P 51
G P P G PG GN P G G G P PGQ P
Sbjct: 204 GPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEFQKGDQGLP 263
Query: 52 GAYPGQAPPGAY--PGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATG-----AYPA- 103
G PPG PG PG G PG PG +GQP G YP
Sbjct: 264 GDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLPGDPGYPGE 323
Query: 104 ------------TGPYGAPAGPLIVP 117
TGP G P L++P
Sbjct: 324 PGRDGEKGQKGDTGPPGPPG--LVIP 347
Score = 42.0 bits (97), Expect = 5e-04
Identities = 36/106 (33%), Positives = 36/106 (33%), Gaps = 18/106 (16%)
Query: 15 GNPNPQGWPGAWGNQ----------PAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYP 64
G P P G PG G P G GYPG P G P PG P P
Sbjct: 144 GPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPG---PPGIQGLPGPTGIPGPIGP---P 197
Query: 65 GAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAP 110
G PG G P P PGP G G G GP G P
Sbjct: 198 GPPGLM-GPPGPPGLPGPKGNMG-LNFQGPKGEKGEQGLQGPPGPP 241
Score = 41.2 bits (95), Expect = 9e-04
Identities = 40/115 (34%), Positives = 46/115 (40%), Gaps = 20/115 (17%)
Query: 15 GNPNPQGWPGAWG--NQPA--GAGGYPGA-SYPGAYPGQAPPG--AYPGQ-APPG--AYP 64
G P P+G PG G P G+ G PG PG + PG +PG PPG
Sbjct: 1077 GLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGIS 1136
Query: 65 GAPGAYPGAPAP------GVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGP 113
G PG PG P G +PG P PG G+P G G G P P
Sbjct: 1137 GPPGN-PGLPGEPGPVGGGGHPGQPGPPG---EKGKPGQDGIPGPAGQKGEPGQP 1187
Score = 38.1 bits (87), Expect = 0.007
Identities = 43/140 (30%), Positives = 48/140 (34%), Gaps = 43/140 (30%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPG----------------AYPGQA 58
G P G+PG G G G G + P PG P PG+
Sbjct: 313 GLPGDPGYPGEPGRD--GEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGEK 370
Query: 59 PPGAYPG--APGAYPGAPAPGVY--PGPPSGPG-------------AYPS----SGQPSA 97
+PG P PG P V PGPP PG + P GQP A
Sbjct: 371 GERGFPGIQGPPGLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGA 430
Query: 98 TGAYPATGPYGAPAGPLIVP 117
G GP G PAGP I P
Sbjct: 431 PG---LPGPPG-PAGPHIPP 446
Score = 35.0 bits (79), Expect = 0.061
Identities = 29/88 (32%), Positives = 34/88 (38%), Gaps = 6/88 (6%)
Query: 26 WGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGAPAPGVYPGPPSG 85
WG QPA A G S PG+ + G+ +PG G +PG P GPP
Sbjct: 20 WG-QPAEAAACYGCS-PGS---KCDCSGIKGEKGERGFPGLEG-HPGLPGFPGPEGPPGP 73
Query: 86 PGAYPSSGQPSATGAYPATGPYGAPAGP 113
G G P G GP G P P
Sbjct: 74 RGQKGDDGIPGPPGPKGIRGPPGLPGFP 101
>gi|15890088 type IV collagen alpha 5 isoform 3 precursor [Homo
sapiens]
Length = 1688
Score = 66.6 bits (161), Expect = 2e-11
Identities = 47/118 (39%), Positives = 51/118 (43%), Gaps = 8/118 (6%)
Query: 14 SGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPG-QAPPGAYPGQAPPGA-YPGAPG--- 68
+G P P G PG G G G PG P PG PG PPG PG PG
Sbjct: 804 NGQPGPMGPPGLPGIGVQGPPGPPGIPGPIGQPGLHGIPGEKGDPGPPGLDVPGPPGERG 863
Query: 69 --AYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPG 124
PGAP P PG P PG +SG P G GP G P GPL +P +PG
Sbjct: 864 SPGIPGAPGPIGPPGSPGLPGKAGASGFPGTKGEMGMMGPPG-PPGPLGIPGRSGVPG 920
Score = 57.4 bits (137), Expect = 1e-08
Identities = 40/110 (36%), Positives = 44/110 (40%), Gaps = 12/110 (10%)
Query: 14 SGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPG-AYPG 72
SG P G PG G P G GG+PG P G+ PG A PG PG PG
Sbjct: 1136 SGPPGNPGLPGEPG--PVGGGGHPGQPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPG 1193
Query: 73 APA-PGV--------YPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGP 113
P PG+ PG P PG G+P G GP G P P
Sbjct: 1194 PPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSP 1243
Score = 57.0 bits (136), Expect = 2e-08
Identities = 47/123 (38%), Positives = 52/123 (42%), Gaps = 14/123 (11%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGA---SYPGAYPGQAPPGAYPGQAPPGAYPGAPG--A 69
G P P+G+PG G P GA G PG P PG P PG A PG PG PG
Sbjct: 710 GPPGPKGFPGIPG--PPGAPGTPGRIGLEGPPGPPGFPGPKGEPGFALPGP-PGPPGLPG 766
Query: 70 YPGAPAPGV---YPGPPSGPGAYPSSGQPSATGAYPATG---PYGAPAGPLIVPYNLPLP 123
+ GA P +PGPP PG G P G G P G P P I P P
Sbjct: 767 FKGALGPKGDRGFPGPPGPPGRTGLDGLPGPKGDVGPNGQPGPMGPPGLPGIGVQGPPGP 826
Query: 124 GGV 126
G+
Sbjct: 827 PGI 829
Score = 56.6 bits (135), Expect = 2e-08
Identities = 49/130 (37%), Positives = 55/130 (42%), Gaps = 20/130 (15%)
Query: 7 LHDALSGSGNPNPQGWPGAWGNQPAGAGGYPGA-SYPGAYPGQAPPG----AYPGQAPPG 61
L + G P PQG G G P+G G PG+ PG + PG PG P
Sbjct: 1025 LKGTIGDMGFPGPQGVEGPPG--PSGVPGQPGSPGLPGQKGDKGDPGISSIGLPGLPGPK 1082
Query: 62 AYPGAPGAYPGAPA-------PGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPL 114
PG PG YPG P PG+ PG P PGA G P G GP G +GP
Sbjct: 1083 GEPGLPG-YPGNPGIKGSVGDPGL-PGLPGTPGAKGQPGLPGFPGTPGPPGPKGI-SGP- 1138
Query: 115 IVPYNLPLPG 124
P N LPG
Sbjct: 1139 --PGNPGLPG 1146
Score = 54.3 bits (129), Expect = 1e-07
Identities = 35/100 (35%), Positives = 38/100 (38%), Gaps = 1/100 (1%)
Query: 15 GNPNPQGWPGAWGNQPA-GAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGA 73
GNP G G G+ G G+PG P PG A P PG P PG PG +
Sbjct: 1312 GNPGRPGLNGMKGDPGLPGVPGFPGMKGPSGVPGSAGPEGEPGLIGPPGPPGLPGPSGQS 1371
Query: 74 PAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGP 113
GPP PG G P G GP G P P
Sbjct: 1372 IIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDP 1411
Score = 53.1 bits (126), Expect = 2e-07
Identities = 39/111 (35%), Positives = 44/111 (39%), Gaps = 7/111 (6%)
Query: 15 GNPNPQGWPGAWGNQ-PAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGA 73
G P G+PG G P G G PG PG G +PGQ P G PG G
Sbjct: 1116 GQPGLPGFPGTPGPPGPKGISGPPGNPGLPGEPGPVGGGGHPGQPGPPGEKGKPG-QDGI 1174
Query: 74 PAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPG 124
P P G P PG + + G P G G G P +P N LPG
Sbjct: 1175 PGPAGQKGEPGQPG-FGNPGPPGLPGLSGQKGDGGLPG----IPGNPGLPG 1220
Score = 51.6 bits (122), Expect = 6e-07
Identities = 45/119 (37%), Positives = 52/119 (43%), Gaps = 24/119 (20%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPG-QAPPGAYPGQAPPG--AYPGAPGAYP 71
G P PQG PG G + G G+PG+ PG +PG Q PPG PPG G PG+
Sbjct: 114 GAPGPQGIPGCNGTK--GERGFPGS--PG-FPGLQGPPG------PPGIPGMKGEPGSII 162
Query: 72 GAPAPGV-----YPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPGG 125
+ PG YPGPP G +G P G G G P P LP P G
Sbjct: 163 MSSLPGPKGNPGYPGPPGIQGLPGPTGIPGPIGPPGPPGLMGPPGPP-----GLPGPKG 216
Score = 50.4 bits (119), Expect = 1e-06
Identities = 46/122 (37%), Positives = 48/122 (39%), Gaps = 21/122 (17%)
Query: 15 GNPNPQGWPGAWG-NQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGA 73
G P QG PG G N G G PG PG +PG P PG A P PG G
Sbjct: 1306 GPPGLQGNPGRPGLNGMKGDPGLPGV--PG-FPGMKGPSGVPGSAGPEGEPGLIGP---- 1358
Query: 74 PAPGVYPGP---------PSGPGAYPSSGQPSATGAYPATGPYG--APAGPLIVPYNLPL 122
P P PGP +GP P GQP G GP G P GP P L
Sbjct: 1359 PGPPGLPGPSGQSIIIKGDAGPPGIP--GQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGL 1416
Query: 123 PG 124
PG
Sbjct: 1417 PG 1418
Score = 49.3 bits (116), Expect = 3e-06
Identities = 35/103 (33%), Positives = 37/103 (35%), Gaps = 4/103 (3%)
Query: 13 GSGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPG--AY 70
G +PN G G G G G PG S P Y G PG + PG PG
Sbjct: 953 GPMDPNLLGSKGEKGEP--GLPGIPGVSGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGN 1010
Query: 71 PGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGP 113
PG P GPP G G P G GP G P P
Sbjct: 1011 PGLPGQPGLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQP 1053
Score = 48.1 bits (113), Expect = 7e-06
Identities = 41/112 (36%), Positives = 46/112 (41%), Gaps = 19/112 (16%)
Query: 14 SGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGA 73
SG P G PG G P G+ G+PG G P PG PGA PGAPG +PG+
Sbjct: 490 SGPPGQPGLPGLPG--PPGSLGFPGQKGEKGQAGATGPKGLPGI--PGA-PGAPG-FPGS 543
Query: 74 PA-PG---VYPG---------PPSGPGAYPSSGQPSATGAYPATGPYGAPAG 112
PG +PG P PG G P G GP G P G
Sbjct: 544 KGEPGDILTFPGMKGDKGELGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGG 595
Score = 48.1 bits (113), Expect = 7e-06
Identities = 41/114 (35%), Positives = 46/114 (40%), Gaps = 15/114 (13%)
Query: 4 NFSLHDALSGSGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPG-- 61
N + ++ G P G PGA G QP G G+PG PG PPG PPG
Sbjct: 1093 NPGIKGSVGDPGLPGLPGTPGAKG-QP-GLPGFPGT------PG--PPGPKGISGPPGNP 1142
Query: 62 AYPGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATG--AYPATGPYGAPAGP 113
PG PG G PG PGPP G G P G P +G P P
Sbjct: 1143 GLPGEPGPVGGGGHPG-QPGPPGEKGKPGQDGIPGPAGQKGEPGQPGFGNPGPP 1195
Score = 48.1 bits (113), Expect = 7e-06
Identities = 38/108 (35%), Positives = 42/108 (38%), Gaps = 9/108 (8%)
Query: 13 GSGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPG-QAPPG--AYPG----QAPPGAYPG 65
G GNP P G PG G + G GG PG PG + PG +PG PPG+
Sbjct: 1188 GFGNPGPPGLPGLSGQK--GDGGLPGIPGNPGLPGPKGEPGFHGFPGVQGPPGPPGSPGP 1245
Query: 66 APGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGP 113
A G P P PG P G G P G G G P P
Sbjct: 1246 ALEGPKGNPGPQGPPGRPGFQGLPGPEGPPGLPGNGGIKGEKGNPGQP 1293
Score = 47.8 bits (112), Expect = 9e-06
Identities = 36/115 (31%), Positives = 44/115 (38%), Gaps = 17/115 (14%)
Query: 15 GNPNPQGWPGAWGNQ----------PAGAGGYPGA-SYPGAYPGQAPPGAYPGQAPPGAY 63
G P P+G PG G + P G G PG +PG PG + G P
Sbjct: 63 GFPGPEGPPGPRGQKGDDGIPGPPGPKGIRGPPGLPGFPGT-PGLPGMPGHDGAPGPQGI 121
Query: 64 PGAPGA-----YPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGP 113
PG G +PG+P GPP PG G+P + GP G P P
Sbjct: 122 PGCNGTKGERGFPGSPGFPGLQGPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYP 176
Score = 47.8 bits (112), Expect = 9e-06
Identities = 42/140 (30%), Positives = 46/140 (32%), Gaps = 42/140 (30%)
Query: 15 GNPNPQGWPGAWGNQ------------PAGAGGYPGASYPGAYPGQAPPGAYPGQ----- 57
G P P G+PG G + P G G PGA PG A P P
Sbjct: 394 GPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGAPGLPGPPGPAGPHIPPSDEICEP 453
Query: 58 APPGAYPGAPG------------------------AYPGAPAPGVYPGPPSGPGAYPSSG 93
PPG PG+PG G P PG P PG+ G
Sbjct: 454 GPPGP-PGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISGPPGQPGLPGLPGPPGSLGFPG 512
Query: 94 QPSATGAYPATGPYGAPAGP 113
Q G ATGP G P P
Sbjct: 513 QKGEKGQAGATGPKGLPGIP 532
Score = 47.0 bits (110), Expect = 2e-05
Identities = 41/120 (34%), Positives = 47/120 (39%), Gaps = 18/120 (15%)
Query: 7 LHDALSGSGNPNPQGW--PGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYP 64
LH G+P P G PG G + G+ G PGA P PG PG PG+A +P
Sbjct: 838 LHGIPGEKGDPGPPGLDVPGPPGER--GSPGIPGAPGPIGPPGS--PGL-PGKAGASGFP 892
Query: 65 GAPGAY-----PGAPAPGVYPGPPSGPGAYPSSGQ------PSATGAYPATGPYGAPAGP 113
G G PG P P PG PG G P TG + G G P P
Sbjct: 893 GTKGEMGMMGPPGPPGPLGIPGRSGVPGLKGDDGLQGQPGLPGPTGEKGSKGEPGLPGPP 952
Score = 46.6 bits (109), Expect = 2e-05
Identities = 40/120 (33%), Positives = 45/120 (37%), Gaps = 23/120 (19%)
Query: 14 SGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPG----QAPPG--AYPGAP 67
SG P G PG GN G G PG P G +PG + PPG PG P
Sbjct: 996 SGQPGLPGPPGPKGNP--GLPGQPGLIGPPGLKGTIGDMGFPGPQGVEGPPGPSGVPGQP 1053
Query: 68 GAYPGAPA-------PGV-------YPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGP 113
G+ PG P PG+ PGP PG G P G+ G G P P
Sbjct: 1054 GS-PGLPGQKGDKGDPGISSIGLPGLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTP 1112
Score = 46.6 bits (109), Expect = 2e-05
Identities = 34/101 (33%), Positives = 35/101 (34%), Gaps = 7/101 (6%)
Query: 15 GNPNPQGWPGAWGNQ-----PAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPG- 68
G P P G PG G AG G PG PG P PG P PG G
Sbjct: 1357 GPPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLPGPTGPPGDPGRNGL 1416
Query: 69 -AYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYG 108
+ GA PG P PG G P G GP G
Sbjct: 1417 PGFDGAGGRKGDPGLPGQPGTRGLDGPPGPDGLQGPPGPPG 1457
Score = 46.2 bits (108), Expect = 3e-05
Identities = 36/103 (34%), Positives = 41/103 (39%), Gaps = 6/103 (5%)
Query: 15 GNPNPQGWPGAWG-NQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGA 73
G+ QG PG G G+ G PG P PG P + G PG PG PG
Sbjct: 923 GDDGLQGQPGLPGPTGEKGSKGEPGLPGP---PGPMDPNLLGSKGEKGE-PGLPGI-PGV 977
Query: 74 PAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIV 116
P Y G P PG SGQP G G G P P ++
Sbjct: 978 SGPKGYQGLPGDPGQPGLSGQPGLPGPPGPKGNPGLPGQPGLI 1020
Score = 46.2 bits (108), Expect = 3e-05
Identities = 33/108 (30%), Positives = 39/108 (36%), Gaps = 7/108 (6%)
Query: 9 DALSG-SGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAP 67
D + G +G G PG P G G G G PG PG + G P
Sbjct: 1172 DGIPGPAGQKGEPGQPGFGNPGPPGLPGLSGQKGDGGLPGIPGNPGLPGPKGEPGFHGFP 1231
Query: 68 GAY-----PGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAP 110
G PG+P P + GP PG G+P G GP G P
Sbjct: 1232 GVQGPPGPPGSPGPAL-EGPKGNPGPQGPPGRPGFQGLPGPEGPPGLP 1278
Score = 45.1 bits (105), Expect = 6e-05
Identities = 41/125 (32%), Positives = 47/125 (37%), Gaps = 26/125 (20%)
Query: 15 GNPNPQGWPGAWGNQ-------PAGAGGYPGASYPGAYPG-QAPPG---AYPGQ------ 57
G P G+PG G + P G G PGA +PG + PG +PG
Sbjct: 503 GPPGSLGFPGQKGEKGQAGATGPKGLPGIPGAPGAPGFPGSKGEPGDILTFPGMKGDKGE 562
Query: 58 -APPGA-----YPGAPG--AYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGA 109
PGA PG PG PG P P PG + G G P G GP G
Sbjct: 563 LGSPGAPGLPGLPGTPGQDGLPGLPGPKGEPGGITFKGERGPPGNPGLPGLPGNIGPMGP 622
Query: 110 PA-GP 113
P GP
Sbjct: 623 PGFGP 627
Score = 45.1 bits (105), Expect = 6e-05
Identities = 39/113 (34%), Positives = 43/113 (38%), Gaps = 7/113 (6%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPG--AYPGAPGAYPG 72
G P P+G PG G G G PG PG P PG PPG G G
Sbjct: 585 GLPGPKGEPG--GITFKGERGPPGNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGN 642
Query: 73 APAPGVYPGPPSGPG-AYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPG 124
PG+ PGP PG G+P G G G P P + P LPG
Sbjct: 643 PGQPGI-PGPKGDPGQTITQPGKPGLPGNPGRDGDVGLPGDPGL-PGQPGLPG 693
Score = 44.3 bits (103), Expect = 1e-04
Identities = 48/141 (34%), Positives = 55/141 (39%), Gaps = 36/141 (25%)
Query: 15 GNPNPQGWPGAWGNQ---PAGAGGYPGASYPGAYPGQAPPG-AYPGQAPPG--AYPGAPG 68
G P G PG G P G G+PG G + PPG + PG PPG PGAPG
Sbjct: 377 GIQGPPGLPGPPGAAVMGPPGPPGFPGER--GQKGDEGPPGISIPG--PPGLDGQPGAPG 432
Query: 69 AYPGAPAP-GVY------------PGPPSGPGAYPSSGQPSATGAYPAT----------G 105
PG P P G + PGPP PG G+ G T G
Sbjct: 433 -LPGPPGPAGPHIPPSDEICEPGPPGPPGSPGDKGLQGEQGVKGDKGDTCFNCIGTGISG 491
Query: 106 PYGAPAGPLI--VPYNLPLPG 124
P G P P + P +L PG
Sbjct: 492 PPGQPGLPGLPGPPGSLGFPG 512
Score = 44.3 bits (103), Expect = 1e-04
Identities = 56/177 (31%), Positives = 60/177 (33%), Gaps = 52/177 (29%)
Query: 15 GNPNPQGWPGAWGNQ-PAGAG-----------------GYPGASYPGAYPGQ--APPG-- 52
GNP G PG G P G G G PG P PGQ PG
Sbjct: 606 GNPGLPGLPGNIGPMGPPGFGPPGPVGEKGIQGVAGNPGQPGIPGPKGDPGQTITQPGKP 665
Query: 53 ------------------AYPGQ----APPGA--YPGAPG-AYPGAPAPGVYPGPPSGPG 87
PGQ PG+ PG PG PG P P +PG P PG
Sbjct: 666 GLPGNPGRDGDVGLPGDPGLPGQPGLPGIPGSKGEPGIPGIGLPGPPGPKGFPGIPGPPG 725
Query: 88 AYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPGGVVPRMLITILGTVKPNANR 144
A G P G GP G P GP P LPG P L G + P +R
Sbjct: 726 A---PGTPGRIGLEGPPGPPGFP-GPKGEP-GFALPGPPGPPGLPGFKGALGPKGDR 777
Score = 43.9 bits (102), Expect = 1e-04
Identities = 33/111 (29%), Positives = 37/111 (33%), Gaps = 2/111 (1%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGAP 74
G P +G PG G G G PG YPG+ GQ PG PG P
Sbjct: 292 GEPGKRGKPGKDGEN--GQPGIPGLPGDPGYPGEPGRDGEKGQKGDTGPPGPPGLVIPRP 349
Query: 75 APGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPGG 125
G+ G G G+ G GP G P P P P G
Sbjct: 350 GTGITIGEKGNIGLPGLPGEKGERGFPGIQGPPGLPGPPGAAVMGPPGPPG 400
Score = 43.5 bits (101), Expect = 2e-04
Identities = 43/141 (30%), Positives = 45/141 (31%), Gaps = 36/141 (25%)
Query: 15 GNPNPQGWPGAWGNQP------------AGAGGYPGASYPGAYPGQAP------------ 50
G P P G PG P G G PG P PG
Sbjct: 1235 GPPGPPGSPGPALEGPKGNPGPQGPPGRPGFQGLPGPEGPPGLPGNGGIKGEKGNPGQPG 1294
Query: 51 ----PGAYPGQAPPG--AYPGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPAT 104
PG Q PPG PG PG PG+ PG P PG SG P + G
Sbjct: 1295 LPGLPGLKGDQGPPGLQGNPGRPGLNGMKGDPGL-PGVPGFPGMKGPSGVPGSAGPEGEP 1353
Query: 105 GPYGAPAGPLIVPYNLPLPGG 125
G G P P LP P G
Sbjct: 1354 GLIGPPGPP-----GLPGPSG 1369
Score = 43.1 bits (100), Expect = 2e-04
Identities = 44/127 (34%), Positives = 46/127 (36%), Gaps = 11/127 (8%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGASYPGAY-PGQAPPGAYPGQAPPGAYPG--APGAYP 71
G+ P+G PG G P G G PG S G A P PGQ PG P P
Sbjct: 1345 GSAGPEGEPGLIG--PPGPPGLPGPSGQSIIIKGDAGPPGIPGQPGLKGLPGPQGPQGLP 1402
Query: 72 GAPAPGVYPGP---PSGPGAYPSSGQPSATGAYPATGPYGAPAGP--LIVPYNLPLPGGV 126
G P PG P GA G P G P T P GP L P P V
Sbjct: 1403 GPTGPPGDPGRNGLPGFDGAGGRKGDPGLPG-QPGTRGLDGPPGPDGLQGPPGPPGTSSV 1461
Query: 127 VPRMLIT 133
LIT
Sbjct: 1462 AHGFLIT 1468
Score = 42.4 bits (98), Expect = 4e-04
Identities = 29/79 (36%), Positives = 31/79 (39%), Gaps = 4/79 (5%)
Query: 32 GAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGAPAPGVYPGPPSGPGAYPS 91
G G+PG PG P PG P G G PG P P GPP PG +
Sbjct: 48 GERGFPGLEGHPGLPGFPGPEGPPG---PRGQKGDDGI-PGPPGPKGIRGPPGLPGFPGT 103
Query: 92 SGQPSATGAYPATGPYGAP 110
G P G A GP G P
Sbjct: 104 PGLPGMPGHDGAPGPQGIP 122
Score = 42.4 bits (98), Expect = 4e-04
Identities = 43/146 (29%), Positives = 46/146 (31%), Gaps = 45/146 (30%)
Query: 15 GNPNPQGWPGAWGNQ------PAGAGGYPGASYPGAYPGQAP-----------------P 51
G P P G PG GN P G G G P PGQ P
Sbjct: 204 GPPGPPGLPGPKGNMGLNFQGPKGEKGEQGLQGPPGPPGQISEQKRPIDVEFQKGDQGLP 263
Query: 52 GAYPGQAPPGAY--PGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATG-----AYPA- 103
G PPG PG PG G PG PG +GQP G YP
Sbjct: 264 GDRGPPGPPGIRGPPGPPGGEKGEKGEQGEPGKRGKPGKDGENGQPGIPGLPGDPGYPGE 323
Query: 104 ------------TGPYGAPAGPLIVP 117
TGP G P L++P
Sbjct: 324 PGRDGEKGQKGDTGPPGPPG--LVIP 347
Score = 42.0 bits (97), Expect = 5e-04
Identities = 36/106 (33%), Positives = 36/106 (33%), Gaps = 18/106 (16%)
Query: 15 GNPNPQGWPGAWGNQ----------PAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYP 64
G P P G PG G P G GYPG P G P PG P P
Sbjct: 144 GPPGPPGIPGMKGEPGSIIMSSLPGPKGNPGYPG---PPGIQGLPGPTGIPGPIGP---P 197
Query: 65 GAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAP 110
G PG G P P PGP G G G GP G P
Sbjct: 198 GPPGLM-GPPGPPGLPGPKGNMG-LNFQGPKGEKGEQGLQGPPGPP 241
Score = 41.2 bits (95), Expect = 9e-04
Identities = 40/115 (34%), Positives = 46/115 (40%), Gaps = 20/115 (17%)
Query: 15 GNPNPQGWPGAWG--NQPA--GAGGYPGA-SYPGAYPGQAPPG--AYPGQ-APPG--AYP 64
G P P+G PG G P G+ G PG PG + PG +PG PPG
Sbjct: 1077 GLPGPKGEPGLPGYPGNPGIKGSVGDPGLPGLPGTPGAKGQPGLPGFPGTPGPPGPKGIS 1136
Query: 65 GAPGAYPGAPAP------GVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGP 113
G PG PG P G +PG P PG G+P G G G P P
Sbjct: 1137 GPPGN-PGLPGEPGPVGGGGHPGQPGPPG---EKGKPGQDGIPGPAGQKGEPGQP 1187
Score = 38.1 bits (87), Expect = 0.007
Identities = 43/140 (30%), Positives = 48/140 (34%), Gaps = 43/140 (30%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPG----------------AYPGQA 58
G P G+PG G G G G + P PG P PG+
Sbjct: 313 GLPGDPGYPGEPGRD--GEKGQKGDTGPPGPPGLVIPRPGTGITIGEKGNIGLPGLPGEK 370
Query: 59 PPGAYPG--APGAYPGAPAPGVY--PGPPSGPG-------------AYPS----SGQPSA 97
+PG P PG P V PGPP PG + P GQP A
Sbjct: 371 GERGFPGIQGPPGLPGPPGAAVMGPPGPPGFPGERGQKGDEGPPGISIPGPPGLDGQPGA 430
Query: 98 TGAYPATGPYGAPAGPLIVP 117
G GP G PAGP I P
Sbjct: 431 PG---LPGPPG-PAGPHIPP 446
Score = 35.0 bits (79), Expect = 0.061
Identities = 30/90 (33%), Positives = 34/90 (37%), Gaps = 10/90 (11%)
Query: 26 WGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPG--AYPGAPAPGVYPGPP 83
WG QPA A G S PG+ + G+ +PG G PG P P GPP
Sbjct: 20 WG-QPAEAAACYGCS-PGS---KCDCSGIKGEKGERGFPGLEGHPGLPGFPGP---EGPP 71
Query: 84 SGPGAYPSSGQPSATGAYPATGPYGAPAGP 113
G G P G GP G P P
Sbjct: 72 GPRGQKGDDGIPGPPGPKGIRGPPGLPGFP 101
>gi|126352446 elastin isoform d precursor [Homo sapiens]
Length = 711
Score = 66.2 bits (160), Expect = 2e-11
Identities = 47/111 (42%), Positives = 51/111 (45%), Gaps = 9/111 (8%)
Query: 21 GWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGA--PAPGV 78
G PG G + A PGA P G PG PG PG YPG G PGA P GV
Sbjct: 114 GVPGVGGLGVSAAPSVPGAVVPQPGAG-VKPGKVPGVGLPGVYPG--GVLPGARFPGVGV 170
Query: 79 YPGPPSGPGAYPSS-GQPSATGAYPATGPYGA--PAGPLIVPYNLP-LPGG 125
PG P+G G P + G A P GP+G P PL P P LPGG
Sbjct: 171 LPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGG 221
Score = 49.7 bits (117), Expect = 2e-06
Identities = 39/118 (33%), Positives = 46/118 (38%), Gaps = 8/118 (6%)
Query: 19 PQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAP-----GAYPGA 73
P G PGA G YPGA G PG P + PG GA GA+P
Sbjct: 26 PGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAFPAV 85
Query: 74 PAPG--VYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPG-GVVP 128
PG V G AY ++ + G P G G A P + +P PG GV P
Sbjct: 86 TFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQPGAGVKP 143
Score = 41.2 bits (95), Expect = 9e-04
Identities = 40/113 (35%), Positives = 42/113 (37%), Gaps = 23/113 (20%)
Query: 40 SYPGAYPGQAPPGAYPGQAPPGAYPGA-------PGAYPGAPAPGVYPGPPSG------- 85
S PG PG P G G PGA GA PG P P PG G G
Sbjct: 24 SRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAFP 83
Query: 86 ----PGAYPSSGQPSATGAYPA----TGPYGAP-AGPLIVPYNLPLPGGVVPR 129
PGA G A AY A G G P G L V +PG VVP+
Sbjct: 84 AVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQ 136
Score = 40.4 bits (93), Expect = 0.001
Identities = 47/146 (32%), Positives = 51/146 (34%), Gaps = 44/146 (30%)
Query: 27 GNQPAGAGGYP--GASYPGAY-----PGQAP----PGAYPGQAPPGAYPGAPGAYP---- 71
G QP GYP PG Y G+ P PG G A YP G P
Sbjct: 202 GPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAA 261
Query: 72 ----------GAPAPGVYP-----GPPSGPGAYP------SSGQPSATGAYPA---TGPY 107
GA A GV P G P PGA P G P+A A A Y
Sbjct: 262 AAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKY 321
Query: 108 GA-----PAGPLIVPYNLPLPGGVVP 128
GA P GP P + +PG VP
Sbjct: 322 GAAAGLVPGGPGFGPGVVGVPGAGVP 347
Score = 37.0 bits (84), Expect = 0.016
Identities = 33/108 (30%), Positives = 38/108 (35%), Gaps = 9/108 (8%)
Query: 23 PGAWGNQPAGAG----GYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGAPAPGV 78
PG G P G G PG PGA P PG A PG A A A
Sbjct: 329 PGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKY 388
Query: 79 YPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPGGV 126
P G G P+ G G +P +G G + +P GGV
Sbjct: 389 GARPGVGVGGIPTYG--VGAGGFPG---FGVGVGGIPGVAGVPGVGGV 431
Score = 35.8 bits (81), Expect = 0.036
Identities = 37/116 (31%), Positives = 37/116 (31%), Gaps = 21/116 (18%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGASY-PGAYPGQAPPGAYPGQAPPGAYPGAP------ 67
G P G PG G G GG PG P A A A G P A
Sbjct: 418 GIPGVAGVPGVGG--VPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPAAAAAKAAAKAAQ 475
Query: 68 -GAYPG---APAPGVYPGPPSGP--------GAYPSSGQPSATGAYPATGPYGAPA 111
G PG AP GV PG P G P G G P GP G A
Sbjct: 476 FGLVPGVGVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAA 531
Score = 35.0 bits (79), Expect = 0.061
Identities = 29/86 (33%), Positives = 30/86 (34%), Gaps = 3/86 (3%)
Query: 38 GASYPGAYPGQAPPGAYPGQAPPG--AYPGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQP 95
G PG G PG G PG A PGA A A PG G GA G P
Sbjct: 561 GVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIP 620
Query: 96 -SATGAYPATGPYGAPAGPLIVPYNL 120
GA PA A A + L
Sbjct: 621 GGVVGAGPAAAAAAAKAAAKAAQFGL 646
Score = 32.7 bits (73), Expect = 0.30
Identities = 25/76 (32%), Positives = 27/76 (35%), Gaps = 6/76 (7%)
Query: 38 GASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGAPAPGVYPGP-PSGPGAYPSSGQPS 96
GA PG G PG G PG GA G P G PG + A + P
Sbjct: 552 GAGIPGLGVGVGVPGLGVGAGVPGLGVGA-----GVPGFGAVPGALAAAKAAKYGAAVPG 606
Query: 97 ATGAYPATGPYGAPAG 112
G A G G P G
Sbjct: 607 VLGGLGALGGVGIPGG 622
Score = 31.2 bits (69), Expect = 0.89
Identities = 31/86 (36%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Query: 38 GASYPG--AYPGQ--APPGAYPGQAPPGAYPGAPGAYPGAPAPG--VYPGPPSGPGAYPS 91
GA PG A PG A A G A PG G GA G PG V GP + A +
Sbjct: 579 GAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGL-GALGGVGIPGGVVGAGPAAAAAAAKA 637
Query: 92 SGQPSATGAYPATGPYGAPAGPLIVP 117
+ + + G A G G G L VP
Sbjct: 638 AAKAAQFGLVGAAGLGGLGVGGLGVP 663
Score = 30.0 bits (66), Expect = 2.0
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 15/64 (23%)
Query: 63 YPGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPL 122
+P PG PGA PG G YP +G + G A GP G P P+
Sbjct: 22 HPSRPGGVPGA-----IPGGVPGGVFYPGAGLGALGGG--ALGPGGKPL--------KPV 66
Query: 123 PGGV 126
PGG+
Sbjct: 67 PGGL 70
Score = 30.0 bits (66), Expect = 2.0
Identities = 32/105 (30%), Positives = 36/105 (34%), Gaps = 8/105 (7%)
Query: 13 GSGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPG---APGA 69
G+G P PG + A A Y GA PG G G +PG G
Sbjct: 361 GAGIPGA-AVPGVVSPEAAAKAAAKAAKY-GARPGVGVGGIPTYGVGAGGFPGFGVGVGG 418
Query: 70 YP---GAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPA 111
P G P G PG PG S +A A A G PA
Sbjct: 419 IPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGVGTPA 463
>gi|126352322 elastin isoform c precursor [Homo sapiens]
Length = 692
Score = 66.2 bits (160), Expect = 2e-11
Identities = 47/111 (42%), Positives = 51/111 (45%), Gaps = 9/111 (8%)
Query: 21 GWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGA--PAPGV 78
G PG G + A PGA P G PG PG PG YPG G PGA P GV
Sbjct: 114 GVPGVGGLGVSAAPSVPGAVVPQPGAG-VKPGKVPGVGLPGVYPG--GVLPGARFPGVGV 170
Query: 79 YPGPPSGPGAYPSS-GQPSATGAYPATGPYGA--PAGPLIVPYNLP-LPGG 125
PG P+G G P + G A P GP+G P PL P P LPGG
Sbjct: 171 LPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGG 221
Score = 49.7 bits (117), Expect = 2e-06
Identities = 39/118 (33%), Positives = 46/118 (38%), Gaps = 8/118 (6%)
Query: 19 PQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAP-----GAYPGA 73
P G PGA G YPGA G PG P + PG GA GA+P
Sbjct: 26 PGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAFPAV 85
Query: 74 PAPG--VYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPG-GVVP 128
PG V G AY ++ + G P G G A P + +P PG GV P
Sbjct: 86 TFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQPGAGVKP 143
Score = 41.2 bits (95), Expect = 9e-04
Identities = 40/113 (35%), Positives = 42/113 (37%), Gaps = 23/113 (20%)
Query: 40 SYPGAYPGQAPPGAYPGQAPPGAYPGA-------PGAYPGAPAPGVYPGPPSG------- 85
S PG PG P G G PGA GA PG P P PG G G
Sbjct: 24 SRPGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAFP 83
Query: 86 ----PGAYPSSGQPSATGAYPA----TGPYGAP-AGPLIVPYNLPLPGGVVPR 129
PGA G A AY A G G P G L V +PG VVP+
Sbjct: 84 AVTFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAAPSVPGAVVPQ 136
Score = 40.4 bits (93), Expect = 0.001
Identities = 47/146 (32%), Positives = 51/146 (34%), Gaps = 44/146 (30%)
Query: 27 GNQPAGAGGYP--GASYPGAY-----PGQAP----PGAYPGQAPPGAYPGAPGAYP---- 71
G QP GYP PG Y G+ P PG G A YP G P
Sbjct: 202 GPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAA 261
Query: 72 ----------GAPAPGVYP-----GPPSGPGAYP------SSGQPSATGAYPA---TGPY 107
GA A GV P G P PGA P G P+A A A Y
Sbjct: 262 AAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKY 321
Query: 108 GA-----PAGPLIVPYNLPLPGGVVP 128
GA P GP P + +PG VP
Sbjct: 322 GAAAGLVPGGPGFGPGVVGVPGAGVP 347
Score = 37.0 bits (84), Expect = 0.016
Identities = 33/108 (30%), Positives = 38/108 (35%), Gaps = 9/108 (8%)
Query: 23 PGAWGNQPAGAG----GYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGAPAPGV 78
PG G P G G PG PGA P PG A PG A A A
Sbjct: 329 PGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKY 388
Query: 79 YPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPGGV 126
P G G P+ G G +P +G G + +P GGV
Sbjct: 389 GARPGVGVGGIPTYG--VGAGGFPG---FGVGVGGIPGVAGVPGVGGV 431
Score = 35.4 bits (80), Expect = 0.047
Identities = 34/109 (31%), Positives = 36/109 (33%), Gaps = 22/109 (20%)
Query: 21 GWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPG-------QAPPGAYPGAPGAYPG- 72
G+PG G GG PG + G G PG QA A G PG
Sbjct: 408 GFPGFG----VGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGV 463
Query: 73 --APAPGVYPGPPSGP--------GAYPSSGQPSATGAYPATGPYGAPA 111
AP GV PG P G P G G P GP G A
Sbjct: 464 GVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAA 512
Score = 35.0 bits (79), Expect = 0.061
Identities = 29/86 (33%), Positives = 30/86 (34%), Gaps = 3/86 (3%)
Query: 38 GASYPGAYPGQAPPGAYPGQAPPG--AYPGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQP 95
G PG G PG G PG A PGA A A PG G GA G P
Sbjct: 542 GVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIP 601
Query: 96 -SATGAYPATGPYGAPAGPLIVPYNL 120
GA PA A A + L
Sbjct: 602 GGVVGAGPAAAAAAAKAAAKAAQFGL 627
Score = 32.7 bits (73), Expect = 0.30
Identities = 38/109 (34%), Positives = 42/109 (38%), Gaps = 22/109 (20%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGASY-PGAYPGQAPPGAYPGQAPP-------GAYPG- 65
G P G PG G G GG PG P A A A G P G PG
Sbjct: 418 GIPGVAGVPGVGG--VPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGV 475
Query: 66 --APGA--YPG---APAPGVYPG----PPSGPGAYPSSGQPSATGAYPA 103
APG PG AP GV PG P GPG ++ + +A A A
Sbjct: 476 GVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKA 524
Score = 32.7 bits (73), Expect = 0.30
Identities = 25/76 (32%), Positives = 27/76 (35%), Gaps = 6/76 (7%)
Query: 38 GASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGAPAPGVYPGP-PSGPGAYPSSGQPS 96
GA PG G PG G PG GA G P G PG + A + P
Sbjct: 533 GAGIPGLGVGVGVPGLGVGAGVPGLGVGA-----GVPGFGAVPGALAAAKAAKYGAAVPG 587
Query: 97 ATGAYPATGPYGAPAG 112
G A G G P G
Sbjct: 588 VLGGLGALGGVGIPGG 603
Score = 31.6 bits (70), Expect = 0.68
Identities = 41/123 (33%), Positives = 45/123 (36%), Gaps = 11/123 (8%)
Query: 13 GSGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPG---APGA 69
G+G P PG + A A Y GA PG G G +PG G
Sbjct: 361 GAGIPGA-AVPGVVSPEAAAKAAAKAAKY-GARPGVGVGGIPTYGVGAGGFPGFGVGVGG 418
Query: 70 YPG-APAPGVYPGPPSGPGAYPSSG-QPSATGAYPA-TGPYGAPAGPLIVPYNLPLPG-G 125
PG A PGV G G G P G P A A A YG G + P PG G
Sbjct: 419 IPGVAGVPGV--GGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVG 476
Query: 126 VVP 128
V P
Sbjct: 477 VAP 479
Score = 31.2 bits (69), Expect = 0.89
Identities = 31/86 (36%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Query: 38 GASYPG--AYPGQ--APPGAYPGQAPPGAYPGAPGAYPGAPAPG--VYPGPPSGPGAYPS 91
GA PG A PG A A G A PG G GA G PG V GP + A +
Sbjct: 560 GAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGL-GALGGVGIPGGVVGAGPAAAAAAAKA 618
Query: 92 SGQPSATGAYPATGPYGAPAGPLIVP 117
+ + + G A G G G L VP
Sbjct: 619 AAKAAQFGLVGAAGLGGLGVGGLGVP 644
Score = 30.0 bits (66), Expect = 2.0
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 15/64 (23%)
Query: 63 YPGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPL 122
+P PG PGA PG G YP +G + G A GP G P P+
Sbjct: 22 HPSRPGGVPGA-----IPGGVPGGVFYPGAGLGALGGG--ALGPGGKPL--------KPV 66
Query: 123 PGGV 126
PGG+
Sbjct: 67 PGGL 70
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 66.2 bits (160), Expect = 2e-11
Identities = 46/122 (37%), Positives = 54/122 (44%), Gaps = 9/122 (7%)
Query: 9 DALSGS-GNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAY---PGQAPPGAYP 64
D GS G P G PGA G + GA G+ G + P PG+ P PG A P
Sbjct: 464 DGKDGSPGEPGANGLPGAAGER--GAPGFRGPAGPNGIPGEKGPAGERGAPGPAGPRGAA 521
Query: 65 GAPG--AYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPL 122
G PG PG P PG P GPG+ G P + G GP G P+GP P +
Sbjct: 522 GEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPGPPG-PSGPRGQPGVMGF 580
Query: 123 PG 124
PG
Sbjct: 581 PG 582
Score = 60.1 bits (144), Expect = 2e-09
Identities = 43/104 (41%), Positives = 50/104 (48%), Gaps = 10/104 (9%)
Query: 14 SGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGA 73
+G P PQG G G+ P G G A +PGA PPG+ PPG G+PG G
Sbjct: 851 AGPPGPQGVKGERGS-PGGPGA---AGFPGARGLPGPPGSNGNPGPPGP-SGSPGK-DGP 904
Query: 74 PAPGVYPGPPSGPGA---YPSSGQPSATGAYPATGPYGAPAGPL 114
P P G P PG +GQP G+ A GP GAP GPL
Sbjct: 905 PGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGAP-GPL 947
Score = 58.2 bits (139), Expect = 7e-09
Identities = 41/100 (41%), Positives = 45/100 (45%), Gaps = 9/100 (9%)
Query: 14 SGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGA 73
+G P P G PG G P G G+PG+ PG+ Q PPG PGQA P PG PGA G
Sbjct: 170 AGYPGPAGPPGPPG--PPGTSGHPGS--PGSPGYQGPPGE-PGQAGPSGPPGPPGAI-GP 223
Query: 74 PAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGP 113
P G PG G P G GP G P P
Sbjct: 224 SGPAGKDGESGRPGRPGERGLPGPPGI---KGPAGIPGFP 260
Score = 57.8 bits (138), Expect = 9e-09
Identities = 44/119 (36%), Positives = 48/119 (40%), Gaps = 20/119 (16%)
Query: 14 SGNPNPQGWPGAWGNQ-PAGAGGYPG-------ASYPGAYPGQAPPGAYPGQAPPGAYPG 65
+G P PQG G G P G G PG A PGA G+ GA PG+ P G
Sbjct: 632 TGPPGPQGLQGLPGTGGPPGENGKPGEPGPKGDAGAPGAPGGKGDAGA-PGERGPPGLAG 690
Query: 66 APGAYPGAPAPGVY--------PGPPSGPGAYPSSGQPSATGAYPATGPYG---APAGP 113
APG GA PG PGPP G G P G + GP G P GP
Sbjct: 691 APGLRGGAGPPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGSPGPKGDKGEPGGP 749
Score = 57.4 bits (137), Expect = 1e-08
Identities = 38/99 (38%), Positives = 43/99 (43%), Gaps = 5/99 (5%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGY-PGASYPGAYPGQAPPG--AYPGQAPPGAYPGAPGA-- 69
G+P G PG + P G Y P G A G YPG A P PG PG
Sbjct: 130 GSPGSPGPPGICESCPTGPQNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPGPPGPPGTSG 189
Query: 70 YPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYG 108
+PG+P Y GPP PG SG P GA +GP G
Sbjct: 190 HPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAG 228
Score = 55.5 bits (132), Expect = 4e-08
Identities = 45/121 (37%), Positives = 47/121 (38%), Gaps = 25/121 (20%)
Query: 13 GSGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQA-PPG-----AYPGQA-PPG---- 61
G G P PQG PG N G G PG + PG G PPG PG PPG
Sbjct: 598 GPGGPGPQGPPGK--NGETGPQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGK 655
Query: 62 ----------AYPGAPGAYPGAPAPGVY--PGPPSGPGAYPSSGQPSATGAYPATGPYGA 109
PGAPG A APG PG PG +G P G A GP G
Sbjct: 656 PGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGLAGAPGLRGGAGPPGPEGGKGAAGPPGP 715
Query: 110 P 110
P
Sbjct: 716 P 716
Score = 54.3 bits (129), Expect = 1e-07
Identities = 44/112 (39%), Positives = 46/112 (41%), Gaps = 18/112 (16%)
Query: 14 SGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPG-QAPPGAYPGAPGAY-- 70
SG+P G PG GN GA G PG S P GQ PG Q PPGA PG G
Sbjct: 896 SGSPGKDGPPGPAGN--TGAPGSPGVSGPKGDAGQPGEKGSPGAQGPPGA-PGPLGIAGI 952
Query: 71 ---------PGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGP 113
PG P P PGP G SG+P A G GP G P
Sbjct: 953 TGARGLAGPPGMPGPRGSPGP---QGVKGESGKPGANGLSGERGPPGPQGLP 1001
Score = 52.4 bits (124), Expect = 4e-07
Identities = 44/129 (34%), Positives = 50/129 (38%), Gaps = 17/129 (13%)
Query: 13 GSGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQ-APPG--AYPGQAPPGAYPGAPGA 69
G G+P P+G G G GA G PG P G PPG PG G PG PG
Sbjct: 733 GLGSPGPKGDKGEPGGP--GADGVPGKDGPRGPTGPIGPPGPAGQPGDKGEGGAPGLPGI 790
Query: 70 YPGAPAPGVY-----PGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIV-------P 117
+PG PGP PGA +G+P G A G G P + P
Sbjct: 791 AGPRGSPGERGETGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGVAGPPGGSGP 850
Query: 118 YNLPLPGGV 126
P P GV
Sbjct: 851 AGPPGPQGV 859
Score = 52.0 bits (123), Expect = 5e-07
Identities = 41/112 (36%), Positives = 45/112 (40%), Gaps = 12/112 (10%)
Query: 13 GSGNPNPQGWPGAWGNQ-------PAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPG 65
G G P G PGA G PAGA G PG PG+ PG G
Sbjct: 394 GKGEMGPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRGERGEAG 453
Query: 66 APGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVP 117
PG PGA G P PGA +G P A G A G + PAGP +P
Sbjct: 454 IPGV-PGAKGEDGKDGSPGEPGA---NGLPGAAGERGAPG-FRGPAGPNGIP 500
Score = 51.6 bits (122), Expect = 6e-07
Identities = 40/111 (36%), Positives = 46/111 (41%), Gaps = 11/111 (9%)
Query: 12 SGSGNPNPQ--GWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGA 69
+G N +PQ + G G GYPG + P PG +PG Y G PG
Sbjct: 146 TGPQNYSPQYDSYDVKSGVAVGGLAGYPGPAGPPGPPGPPGTSGHPGSPGSPGYQGPPGE 205
Query: 70 YPGAPAPGVYPGP-----PSGP-GAYPSSGQPSATGAYPATGPYG--APAG 112
PG P PGP PSGP G SG+P G GP G PAG
Sbjct: 206 -PGQAGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPGPPGIKGPAG 255
Score = 49.7 bits (117), Expect = 2e-06
Identities = 36/103 (34%), Positives = 43/103 (41%), Gaps = 6/103 (5%)
Query: 14 SGNPNPQGWPGAWGNQPA-GAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGA--Y 70
+G P G PG G + A G G PG PGA + GA PG PG PG +
Sbjct: 287 NGLPGENGAPGPMGPRGAPGERGRPGL--PGAAGARGNDGARGSDGQPGP-PGPPGTAGF 343
Query: 71 PGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGP 113
PG+P GP PG+ + GQ G G G P P
Sbjct: 344 PGSPGAKGEVGPAGSPGSNGAPGQRGEPGPQGHAGAQGPPGPP 386
Score = 49.7 bits (117), Expect = 2e-06
Identities = 35/96 (36%), Positives = 41/96 (42%), Gaps = 5/96 (5%)
Query: 14 SGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPG-QAPPGAYPGQAPPGAYPGAPGAYPG 72
+G+P G PG G G G+ GA P PG PG G+ P PGAPG G
Sbjct: 356 AGSPGSNGAPGQRGEP--GPQGHAGAQGPPGPPGINGSPGG-KGEMGPAGIPGAPGLM-G 411
Query: 73 APAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYG 108
A P G PG +G+P GA GP G
Sbjct: 412 ARGPPGPAGANGAPGLRGGAGEPGKNGAKGEPGPRG 447
Score = 48.9 bits (115), Expect = 4e-06
Identities = 33/100 (33%), Positives = 36/100 (36%), Gaps = 5/100 (5%)
Query: 15 GNPNPQGWPGAWGNQ-PAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGA 73
G P+G PG G P G G+PGA PG PG+ G PG G
Sbjct: 789 GIAGPRGSPGERGETGPPGPAGFPGAPGQNGEPGGKGERGAPGEKGEGGPPGV----AGP 844
Query: 74 PAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGP 113
P GPP G G P GA G G P P
Sbjct: 845 PGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPP 884
Score = 48.1 bits (113), Expect = 7e-06
Identities = 39/118 (33%), Positives = 45/118 (38%), Gaps = 19/118 (16%)
Query: 15 GNPNPQGWPGAWGNQPA-GAGGYPGASYPGAYPGQAPPGAY------------PGQAPPG 61
G+P P G PG G+ G G PG+ P P G G A G
Sbjct: 109 GDPGPPGIPGRNGDPGIPGQPGSPGSPGPPGICESCPTGPQNYSPQYDSYDVKSGVAVGG 168
Query: 62 --AYPG--APGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGA--PAGP 113
YPG P PG P +PG P PG G+P G GP GA P+GP
Sbjct: 169 LAGYPGPAGPPGPPGPPGTSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGP 226
Score = 48.1 bits (113), Expect = 7e-06
Identities = 37/112 (33%), Positives = 43/112 (38%), Gaps = 17/112 (15%)
Query: 15 GNPNPQGWPGAWGNQ-PAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGA 73
G+P QG PG G P+G G PGA P G+ PG+ PG PG A
Sbjct: 195 GSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPGRPGERGLPGPPGIKGPA 254
Query: 74 PAPGVYP---------------GPPSGPGAYPSSGQPSATGAYPATGPYGAP 110
PG +P G PG +G P GA GP GAP
Sbjct: 255 GIPG-FPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAPGPMGPRGAP 305
Score = 47.8 bits (112), Expect = 9e-06
Identities = 36/103 (34%), Positives = 40/103 (38%), Gaps = 7/103 (6%)
Query: 15 GNPNPQGWPGAWGNQPA----GAGGYPGASYPGAYPGQAPPGAYPGQAPPGAY-PGAPGA 69
G P G+PG GN A G G PG P PG+ G Q PPG PG
Sbjct: 573 GQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGPPGKN--GETGPQGPPGPTGPGGDKG 630
Query: 70 YPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAG 112
G P P G P G +G+P G G GAP G
Sbjct: 631 DTGPPGPQGLQGLPGTGGPPGENGKPGEPGPKGDAGAPGAPGG 673
Score = 47.8 bits (112), Expect = 9e-06
Identities = 40/132 (30%), Positives = 46/132 (34%), Gaps = 34/132 (25%)
Query: 15 GNPNPQGWPGAWG----------NQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYP 64
GNP G PG G N GA G PG P G A G++ P
Sbjct: 1014 GNPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGPAGPA 1073
Query: 65 GAPGAYPGAPAPGV-----------------------YPGPPSGPGAYPSSGQPSATGAY 101
GAPG APG +PG P PG+ +GQ A G+
Sbjct: 1074 GAPGPAGSRGAPGPQGPRGDKGETGERGAAGIKGHRGFPGNPGAPGSPGPAGQQGAIGSP 1133
Query: 102 PATGPYGAPAGP 113
GP G P GP
Sbjct: 1134 GPAGPRG-PVGP 1144
Score = 47.0 bits (110), Expect = 2e-05
Identities = 40/126 (31%), Positives = 48/126 (38%), Gaps = 33/126 (26%)
Query: 15 GNPNPQGWPGAWGNQ-PAGAGGYPGAS-------------------------YPG--AYP 46
G P +G PG G + PAG G+PG PG P
Sbjct: 237 GRPGERGLPGPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENGAP 296
Query: 47 GQAPPGAYPGQAPPGAYPGAPGA--YPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPAT 104
G P PG+ PGA GA GA PGPP PG ++G P + GA
Sbjct: 297 GPMGPRGAPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPG---TAGFPGSPGAKGEV 353
Query: 105 GPYGAP 110
GP G+P
Sbjct: 354 GPAGSP 359
Score = 47.0 bits (110), Expect = 2e-05
Identities = 37/103 (35%), Positives = 43/103 (41%), Gaps = 8/103 (7%)
Query: 15 GNPNPQGWPGAWGNQ----PAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAY 70
G P G+PG+ G + PAG+ G GA PG P G Q PPG PG G+
Sbjct: 336 GPPGTAGFPGSPGAKGEVGPAGSPGSNGA--PGQRGEPGPQGHAGAQGPPGP-PGINGS- 391
Query: 71 PGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGP 113
PG G P PG + G P GA A G G P
Sbjct: 392 PGGKGEMGPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEP 434
Score = 46.6 bits (109), Expect = 2e-05
Identities = 41/118 (34%), Positives = 45/118 (38%), Gaps = 26/118 (22%)
Query: 8 HDALSGS-GNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGA 66
+D GS G P P G P G G+PG+ PGA G+ P PG G
Sbjct: 322 NDGARGSDGQPGPPG--------PPGTAGFPGS--PGA-KGEVGPAGSPGSNGAPGQRGE 370
Query: 67 PGAYPGAPAPGVYPGPPS-----------GPGAYPSSGQPSATGAYPATGPYGAPAGP 113
PG A A G PGPP GP P G P GA GP GA P
Sbjct: 371 PGPQGHAGAQGP-PGPPGINGSPGGKGEMGPAGIP--GAPGLMGARGPPGPAGANGAP 425
Score = 45.4 bits (106), Expect = 5e-05
Identities = 38/112 (33%), Positives = 43/112 (38%), Gaps = 15/112 (13%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQ-APPGAYPGQAPPGAY-----PGAPG 68
G P P G GA G G G PG PG PG+ PPG+ PG PG
Sbjct: 510 GAPGPAGPRGAAGEP--GRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPGPPG 567
Query: 69 AYPGAPAPGV--YPGPPSGPGAYPSSGQPSATGAYPATGPYG-----APAGP 113
PGV +PGP GA +G+ G GP G P GP
Sbjct: 568 PSGPRGQPGVMGFPGPKGNDGAPGKNGERGGPGGPGPQGPPGKNGETGPQGP 619
Score = 45.1 bits (105), Expect = 6e-05
Identities = 40/128 (31%), Positives = 46/128 (35%), Gaps = 17/128 (13%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPG-------QAPPGAY---- 63
G+P QG PGA G P G G GA PG P PG PGA
Sbjct: 933 GSPGAQGPPGAPG--PLGIAGITGARGLAGPPGMPGPRGSPGPQGVKGESGKPGANGLSG 990
Query: 64 ---PGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNL 120
P P PG PG PG+ G+ + G G G+P P +
Sbjct: 991 ERGPPGPQGLPGLAGTAGEPGRDGNPGSDGLPGRDGSPGGKGDRGENGSPGAPGAPGHPG 1050
Query: 121 PLPGGVVP 128
P PG V P
Sbjct: 1051 P-PGPVGP 1057
Score = 44.3 bits (103), Expect = 1e-04
Identities = 35/113 (30%), Positives = 42/113 (37%), Gaps = 12/113 (10%)
Query: 13 GSGNPNP---QGWPGAWGNQ-PAGAGGYPGAS-------YPGAYPGQAPPGAYPGQAPPG 61
G+G P +G PG G + AG G PGA PG PGA + PG
Sbjct: 430 GAGEPGKNGAKGEPGPRGERGEAGIPGVPGAKGEDGKDGSPGEPGANGLPGAAGERGAPG 489
Query: 62 AY-PGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGP 113
P P PG P G P G ++G+P G G G P P
Sbjct: 490 FRGPAGPNGIPGEKGPAGERGAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSP 542
Score = 43.1 bits (100), Expect = 2e-04
Identities = 38/99 (38%), Positives = 45/99 (45%), Gaps = 16/99 (16%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQ-APPGAYPGQAPPGAYPGAPGAYPGA 73
G+P P G G G P+G G G S +PG PPG + G+ G+PG +PG
Sbjct: 1131 GSPGPAGPRGPVG--PSGPPGKDGTS---GHPGPIGPPGPRGNRGERGS-EGSPG-HPGQ 1183
Query: 74 PAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAG 112
P P PGPP PG P G GA G G AG
Sbjct: 1184 PGP---PGPPGAPG--PCCG---GVGAAAIAGIGGEKAG 1214
Score = 42.7 bits (99), Expect = 3e-04
Identities = 41/114 (35%), Positives = 45/114 (39%), Gaps = 19/114 (16%)
Query: 15 GNPNPQGWPGAWGNQPA----GAGGYPGASYPGAYPGQAPPGAY-----PGQAPPGAYPG 65
G P+G G G + A G G+PG PGA P G PG A P P
Sbjct: 1086 GPQGPRGDKGETGERGAAGIKGHRGFPGN--PGAPGSPGPAGQQGAIGSPGPAGPRG-PV 1142
Query: 66 APGAYPGAPAPGVYPGP--PSGP----GAYPSSGQPSATGAYPATGPYGAPAGP 113
P PG +PGP P GP G S G P G GP GAP GP
Sbjct: 1143 GPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSPGHPGQPGPPGPPGAP-GP 1195
Score = 38.5 bits (88), Expect = 0.006
Identities = 28/89 (31%), Positives = 32/89 (35%), Gaps = 22/89 (24%)
Query: 15 GNPNPQGWPGAWGNQ-------PAGAGGYPGASYPGAYPGQ-APPG-------------- 52
G+P P G GA G+ P G G PG +PG PPG
Sbjct: 1119 GSPGPAGQQGAIGSPGPAGPRGPVGPSGPPGKDGTSGHPGPIGPPGPRGNRGERGSEGSP 1178
Query: 53 AYPGQAPPGAYPGAPGAYPGAPAPGVYPG 81
+PGQ P PGAPG G G
Sbjct: 1179 GHPGQPGPPGPPGAPGPCCGGVGAAAIAG 1207
Score = 37.0 bits (84), Expect = 0.016
Identities = 31/91 (34%), Positives = 37/91 (40%), Gaps = 17/91 (18%)
Query: 27 GNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGAPAP-GVYPGPPSG 85
G P G G PG PPG PG+ PG PG+ PG+P P G+ P+G
Sbjct: 101 GQGPQGPKGDPG-----------PPGI-PGRNGDPGIPGQPGS-PGSPGPPGICESCPTG 147
Query: 86 PGAYP---SSGQPSATGAYPATGPYGAPAGP 113
P Y S + A Y PAGP
Sbjct: 148 PQNYSPQYDSYDVKSGVAVGGLAGYPGPAGP 178
Score = 36.2 bits (82), Expect = 0.028
Identities = 27/68 (39%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 14 SGNPNPQGWPGAWGNQ-PAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPG 72
SG+P P G PG GN+ G+ G PG +PG PPGA PG G A G
Sbjct: 1154 SGHPGPIGPPGPRGNRGERGSEGSPG--HPGQPGPPGPPGA-PGPCCGGVGAAAIAGIGG 1210
Query: 73 APAPGVYP 80
A G P
Sbjct: 1211 EKAGGFAP 1218
Score = 32.3 bits (72), Expect = 0.40
Identities = 25/60 (41%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Query: 50 PPGAYPGQAPPGAYPGAPGAYPGAPA-PGVY--PGPPSGPGAYPSSGQPSATGAYPATGP 106
PP A P + P G P P PG P PG PG P PG+ S G P + P TGP
Sbjct: 91 PPTA-PTRPPNGQGPQGPKGDPGPPGIPGRNGDPGIPGQPGSPGSPGPPGICESCP-TGP 148
Score = 32.0 bits (71), Expect = 0.52
Identities = 22/59 (37%), Positives = 24/59 (40%), Gaps = 5/59 (8%)
Query: 59 PPGAYPGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYG----APAGP 113
PP A P P G P PGPP PG G P G+ + GP G P GP
Sbjct: 91 PPTA-PTRPPNGQGPQGPKGDPGPPGIPGRNGDPGIPGQPGSPGSPGPPGICESCPTGP 148
>gi|126352608 elastin isoform e precursor [Homo sapiens]
Length = 705
Score = 63.9 bits (154), Expect = 1e-10
Identities = 46/109 (42%), Positives = 50/109 (45%), Gaps = 16/109 (14%)
Query: 31 AGAGGYPGASYPGAYPGQAPP----GAYPGQAP----PGAYPGAPGAYPGA--PAPGVYP 80
AG GG PG G G P G PG+ P PG YPG G PGA P GV P
Sbjct: 110 AGLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLPGVYPG--GVLPGARFPGVGVLP 167
Query: 81 GPPSGPGAYPSS-GQPSATGAYPATGPYGA--PAGPLIVPYNLP-LPGG 125
G P+G G P + G A P GP+G P PL P P LPGG
Sbjct: 168 GVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGG 216
Score = 47.0 bits (110), Expect = 2e-05
Identities = 39/118 (33%), Positives = 46/118 (38%), Gaps = 13/118 (11%)
Query: 19 PQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAP-----GAYPGA 73
P G PGA G YPGA G PG P + PG GA GA+P
Sbjct: 26 PGGVPGAIPGGVPGGVFYPGAGLGALGGGALGPGGKPLKPVPGGLAGAGLGAGLGAFPAV 85
Query: 74 PAPG--VYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPG-GVVP 128
PG V G AY ++ + G P G G AG ++ P PG GV P
Sbjct: 86 TFPGALVPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVV-----PQPGAGVKP 138
Score = 40.4 bits (93), Expect = 0.001
Identities = 47/146 (32%), Positives = 51/146 (34%), Gaps = 44/146 (30%)
Query: 27 GNQPAGAGGYP--GASYPGAY-----PGQAP----PGAYPGQAPPGAYPGAPGAYP---- 71
G QP GYP PG Y G+ P PG G A YP G P
Sbjct: 197 GPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAA 256
Query: 72 ----------GAPAPGVYP-----GPPSGPGAYP------SSGQPSATGAYPA---TGPY 107
GA A GV P G P PGA P G P+A A A Y
Sbjct: 257 AAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKY 316
Query: 108 GA-----PAGPLIVPYNLPLPGGVVP 128
GA P GP P + +PG VP
Sbjct: 317 GAAAGLVPGGPGFGPGVVGVPGAGVP 342
Score = 39.3 bits (90), Expect = 0.003
Identities = 29/70 (41%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
Query: 40 SYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATG 99
S PG PG P G G PGA GA G GA PG P P PG +G + G
Sbjct: 24 SRPGGVPGAIPGGVPGGVFYPGAGLGALGG--GALGPGGKPLKPV-PGGLAGAGLGAGLG 80
Query: 100 AYPATGPYGA 109
A+PA GA
Sbjct: 81 AFPAVTFPGA 90
Score = 37.0 bits (84), Expect = 0.016
Identities = 33/108 (30%), Positives = 38/108 (35%), Gaps = 9/108 (8%)
Query: 23 PGAWGNQPAGAG----GYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGAPAPGV 78
PG G P G G PG PGA P PG A PG A A A
Sbjct: 324 PGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKY 383
Query: 79 YPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPGGV 126
P G G P+ G G +P +G G + +P GGV
Sbjct: 384 GARPGVGVGGIPTYG--VGAGGFPG---FGVGVGGIPGVAGVPGVGGV 426
Score = 35.4 bits (80), Expect = 0.047
Identities = 34/109 (31%), Positives = 36/109 (33%), Gaps = 22/109 (20%)
Query: 21 GWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPG-------QAPPGAYPGAPGAYPG- 72
G+PG G GG PG + G G PG QA A G PG
Sbjct: 403 GFPGFG----VGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGV 458
Query: 73 --APAPGVYPGPPSGP--------GAYPSSGQPSATGAYPATGPYGAPA 111
AP GV PG P G P G G P GP G A
Sbjct: 459 GVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAA 507
Score = 35.0 bits (79), Expect = 0.061
Identities = 29/86 (33%), Positives = 30/86 (34%), Gaps = 3/86 (3%)
Query: 38 GASYPGAYPGQAPPGAYPGQAPPG--AYPGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQP 95
G PG G PG G PG A PGA A A PG G GA G P
Sbjct: 537 GVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIP 596
Query: 96 -SATGAYPATGPYGAPAGPLIVPYNL 120
GA PA A A + L
Sbjct: 597 GGVVGAGPAAAAAAAKAAAKAAQFGL 622
Score = 32.7 bits (73), Expect = 0.30
Identities = 38/109 (34%), Positives = 42/109 (38%), Gaps = 22/109 (20%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGASY-PGAYPGQAPPGAYPGQAPP-------GAYPG- 65
G P G PG G G GG PG P A A A G P G PG
Sbjct: 413 GIPGVAGVPGVGG--VPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGV 470
Query: 66 --APGA--YPG---APAPGVYPG----PPSGPGAYPSSGQPSATGAYPA 103
APG PG AP GV PG P GPG ++ + +A A A
Sbjct: 471 GVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKA 519
Score = 32.7 bits (73), Expect = 0.30
Identities = 25/76 (32%), Positives = 27/76 (35%), Gaps = 6/76 (7%)
Query: 38 GASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGAPAPGVYPGP-PSGPGAYPSSGQPS 96
GA PG G PG G PG GA G P G PG + A + P
Sbjct: 528 GAGIPGLGVGVGVPGLGVGAGVPGLGVGA-----GVPGFGAVPGALAAAKAAKYGAAVPG 582
Query: 97 ATGAYPATGPYGAPAG 112
G A G G P G
Sbjct: 583 VLGGLGALGGVGIPGG 598
Score = 31.6 bits (70), Expect = 0.68
Identities = 41/123 (33%), Positives = 45/123 (36%), Gaps = 11/123 (8%)
Query: 13 GSGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPG---APGA 69
G+G P PG + A A Y GA PG G G +PG G
Sbjct: 356 GAGIPGA-AVPGVVSPEAAAKAAAKAAKY-GARPGVGVGGIPTYGVGAGGFPGFGVGVGG 413
Query: 70 YPG-APAPGVYPGPPSGPGAYPSSG-QPSATGAYPA-TGPYGAPAGPLIVPYNLPLPG-G 125
PG A PGV G G G P G P A A A YG G + P PG G
Sbjct: 414 IPGVAGVPGV--GGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVG 471
Query: 126 VVP 128
V P
Sbjct: 472 VAP 474
Score = 31.2 bits (69), Expect = 0.89
Identities = 31/86 (36%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Query: 38 GASYPG--AYPGQ--APPGAYPGQAPPGAYPGAPGAYPGAPAPG--VYPGPPSGPGAYPS 91
GA PG A PG A A G A PG G GA G PG V GP + A +
Sbjct: 555 GAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGL-GALGGVGIPGGVVGAGPAAAAAAAKA 613
Query: 92 SGQPSATGAYPATGPYGAPAGPLIVP 117
+ + + G A G G G L VP
Sbjct: 614 AAKAAQFGLVGAAGLGGLGVGGLGVP 639
Score = 30.0 bits (66), Expect = 2.0
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 15/64 (23%)
Query: 63 YPGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPL 122
+P PG PGA PG G YP +G + G A GP G P P+
Sbjct: 22 HPSRPGGVPGA-----IPGGVPGGVFYPGAGLGALGGG--ALGPGGKPL--------KPV 66
Query: 123 PGGV 126
PGG+
Sbjct: 67 PGGL 70
>gi|126352700 elastin isoform b precursor [Homo sapiens]
Length = 677
Score = 63.9 bits (154), Expect = 1e-10
Identities = 46/109 (42%), Positives = 50/109 (45%), Gaps = 16/109 (14%)
Query: 31 AGAGGYPGASYPGAYPGQAPP----GAYPGQAP----PGAYPGAPGAYPGA--PAPGVYP 80
AG GG PG G G P G PG+ P PG YPG G PGA P GV P
Sbjct: 100 AGLGGVPGVGGLGVSAGAVVPQPGAGVKPGKVPGVGLPGVYPG--GVLPGARFPGVGVLP 157
Query: 81 GPPSGPGAYPSS-GQPSATGAYPATGPYGA--PAGPLIVPYNLP-LPGG 125
G P+G G P + G A P GP+G P PL P P LPGG
Sbjct: 158 GVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGYPIKAPKLPGG 206
Score = 44.3 bits (103), Expect = 1e-04
Identities = 38/112 (33%), Positives = 46/112 (41%), Gaps = 19/112 (16%)
Query: 30 PAGAGGYPGASYPGAYPG-----QAPPGAYPGQAPPGAYPGAP-----GAYPGAPAPG-- 77
P+ GG PGA PG PG PG P + PG GA GA+P PG
Sbjct: 23 PSRPGGVPGA-IPGGVPGGVFYPALGPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGAL 81
Query: 78 VYPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPG-GVVP 128
V G AY ++ + G P G G AG ++ P PG GV P
Sbjct: 82 VPGGVADAAAAYKAAKAGAGLGGVPGVGGLGVSAGAVV-----PQPGAGVKP 128
Score = 40.4 bits (93), Expect = 0.001
Identities = 47/146 (32%), Positives = 51/146 (34%), Gaps = 44/146 (30%)
Query: 27 GNQPAGAGGYP--GASYPGAY-----PGQAP----PGAYPGQAPPGAYPGAPGAYP---- 71
G QP GYP PG Y G+ P PG G A YP G P
Sbjct: 187 GPQPGVPLGYPIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAA 246
Query: 72 ----------GAPAPGVYP-----GPPSGPGAYP------SSGQPSATGAYPA---TGPY 107
GA A GV P G P PGA P G P+A A A Y
Sbjct: 247 AAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGIGGIAGVGTPAAAAAAAAAAKAAKY 306
Query: 108 GA-----PAGPLIVPYNLPLPGGVVP 128
GA P GP P + +PG VP
Sbjct: 307 GAAAGLVPGGPGFGPGVVGVPGAGVP 332
Score = 37.0 bits (84), Expect = 0.016
Identities = 33/108 (30%), Positives = 38/108 (35%), Gaps = 9/108 (8%)
Query: 23 PGAWGNQPAGAG----GYPGASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGAPAPGV 78
PG G P G G PG PGA P PG A PG A A A
Sbjct: 314 PGGPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVSPEAAAKAAAKAAKY 373
Query: 79 YPGPPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPYNLPLPGGV 126
P G G P+ G G +P +G G + +P GGV
Sbjct: 374 GARPGVGVGGIPTYG--VGAGGFPG---FGVGVGGIPGVAGVPGVGGV 416
Score = 35.4 bits (80), Expect = 0.047
Identities = 34/109 (31%), Positives = 36/109 (33%), Gaps = 22/109 (20%)
Query: 21 GWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPG-------QAPPGAYPGAPGAYPG- 72
G+PG G GG PG + G G PG QA A G PG
Sbjct: 393 GFPGFG----VGVGGIPGVAGVPGVGGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGV 448
Query: 73 --APAPGVYPGPPSGP--------GAYPSSGQPSATGAYPATGPYGAPA 111
AP GV PG P G P G G P GP G A
Sbjct: 449 GVAPGVGVAPGVGVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAA 497
Score = 35.0 bits (79), Expect = 0.061
Identities = 29/86 (33%), Positives = 30/86 (34%), Gaps = 3/86 (3%)
Query: 38 GASYPGAYPGQAPPGAYPGQAPPG--AYPGAPGAYPGAPAPGVYPGPPSGPGAYPSSGQP 95
G PG G PG G PG A PGA A A PG G GA G P
Sbjct: 527 GVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGLGALGGVGIP 586
Query: 96 -SATGAYPATGPYGAPAGPLIVPYNL 120
GA PA A A + L
Sbjct: 587 GGVVGAGPAAAAAAAKAAAKAAQFGL 612
Score = 32.7 bits (73), Expect = 0.30
Identities = 38/109 (34%), Positives = 42/109 (38%), Gaps = 22/109 (20%)
Query: 15 GNPNPQGWPGAWGNQPAGAGGYPGASY-PGAYPGQAPPGAYPGQAPP-------GAYPG- 65
G P G PG G G GG PG P A A A G P G PG
Sbjct: 403 GIPGVAGVPGVGG--VPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGV 460
Query: 66 --APGA--YPG---APAPGVYPG----PPSGPGAYPSSGQPSATGAYPA 103
APG PG AP GV PG P GPG ++ + +A A A
Sbjct: 461 GVAPGVGLAPGVGVAPGVGVAPGVGVAPGIGPGGVAAAAKSAAKVAAKA 509
Score = 32.7 bits (73), Expect = 0.30
Identities = 25/76 (32%), Positives = 27/76 (35%), Gaps = 6/76 (7%)
Query: 38 GASYPGAYPGQAPPGAYPGQAPPGAYPGAPGAYPGAPAPGVYPGP-PSGPGAYPSSGQPS 96
GA PG G PG G PG GA G P G PG + A + P
Sbjct: 518 GAGIPGLGVGVGVPGLGVGAGVPGLGVGA-----GVPGFGAVPGALAAAKAAKYGAAVPG 572
Query: 97 ATGAYPATGPYGAPAG 112
G A G G P G
Sbjct: 573 VLGGLGALGGVGIPGG 588
Score = 31.6 bits (70), Expect = 0.68
Identities = 41/123 (33%), Positives = 45/123 (36%), Gaps = 11/123 (8%)
Query: 13 GSGNPNPQGWPGAWGNQPAGAGGYPGASYPGAYPGQAPPGAYPGQAPPGAYPG---APGA 69
G+G P PG + A A Y GA PG G G +PG G
Sbjct: 346 GAGIPGA-AVPGVVSPEAAAKAAAKAAKY-GARPGVGVGGIPTYGVGAGGFPGFGVGVGG 403
Query: 70 YPG-APAPGVYPGPPSGPGAYPSSG-QPSATGAYPA-TGPYGAPAGPLIVPYNLPLPG-G 125
PG A PGV G G G P G P A A A YG G + P PG G
Sbjct: 404 IPGVAGVPGV--GGVPGVGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPGVG 461
Query: 126 VVP 128
V P
Sbjct: 462 VAP 464
Score = 31.2 bits (69), Expect = 0.89
Identities = 31/86 (36%), Positives = 36/86 (41%), Gaps = 7/86 (8%)
Query: 38 GASYPG--AYPGQ--APPGAYPGQAPPGAYPGAPGAYPGAPAPG--VYPGPPSGPGAYPS 91
GA PG A PG A A G A PG G GA G PG V GP + A +
Sbjct: 545 GAGVPGFGAVPGALAAAKAAKYGAAVPGVLGGL-GALGGVGIPGGVVGAGPAAAAAAAKA 603
Query: 92 SGQPSATGAYPATGPYGAPAGPLIVP 117
+ + + G A G G G L VP
Sbjct: 604 AAKAAQFGLVGAAGLGGLGVGGLGVP 629
Score = 30.8 bits (68), Expect = 1.2
Identities = 25/68 (36%), Positives = 29/68 (42%), Gaps = 7/68 (10%)
Query: 63 YPGAPGAYPGAPAPGVYPG----PPSGPGAYPSSGQPSATGAYPATGPYGAPAGPLIVPY 118
+P PG PGA PG PG P GPG P +P G A G A P +
Sbjct: 22 HPSRPGGVPGA-IPGGVPGGVFYPALGPGGKPL--KPVPGGLAGAGLGAGLGAFPAVTFP 78
Query: 119 NLPLPGGV 126
+PGGV
Sbjct: 79 GALVPGGV 86
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.139 0.444
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,385,087
Number of Sequences: 37866
Number of extensions: 1131612
Number of successful extensions: 25850
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 1232
Number of HSP's that attempted gapping in prelim test: 6533
Number of HSP's gapped (non-prelim): 8082
length of query: 250
length of database: 18,247,518
effective HSP length: 100
effective length of query: 150
effective length of database: 14,460,918
effective search space: 2169137700
effective search space used: 2169137700
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.