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Name: LGALS9B Sequence: fasta or formatted (355aa) NCBI GI: 111494237
Description:

galectin-9 like

Referenced in:

Lectin Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         17           1
 C cysteine            1.7          6           1
 D aspartate           2.8         10           1
 E glutamate           2.5          9           2
 F phenylalanine       7.9         28           1
 G glycine             7.6         27           2
 H histidine           3.7         13           1
 I isoleucine          5.1         18           2
 K lysine              2.5          9           1
 L leucine             5.1         18           1
 M methionine          3.1         11           2
 N asparagine          4.5         16           2
 P proline             9.9         35           2
 Q glutamine           6.5         23           1
 R arginine            5.9         21           2
 S serine              9.0         32           3
 T threonine           5.4         19           2
 V valine              8.7         31           2
 W tryptophan          0.8          3           1
 Y tyrosine            2.5          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   galectin-9 like 
LGALS9C               0.983   galectin 9 like 
LGALS9                0.955   galectin-9 isoform long 
LGALS9                0.836   galectin-9 isoform short 
LGALS4                0.266   galectin-4 
LGALS8                0.234   galectin-8 isoform a 
LGALS8                0.234   galectin-8 isoform a 
LGALS8                0.209   galectin-8 isoform b 
LGALS8                0.209   galectin-8 isoform b 
LGALS12               0.139   lectin, galactoside-binding, soluble, 12 isoform 1 ...
LGALS12               0.132   lectin, galactoside-binding, soluble, 12 isoform 2 [...
LGALS3                0.126   galectin 3 
LGALS12               0.119   lectin, galactoside-binding, soluble, 12 isoform 3 ...
LGALS12               0.108   lectin, galactoside-binding, soluble, 12 isoform 4 ...
LGALS12               0.094   lectin, galactoside-binding, soluble, 12 isoform 5 ...
LGALS7                0.088   galectin-7 
LGALS7B               0.088   galectin-7B 
HSPC159               0.085   hypothetical protein LOC29094 
LOC148003             0.062   PREDICTED: similar to lectin, galactoside-binding, ...
LOC148003             0.062   PREDICTED: similar to lectin, galactoside-binding, ...
LOC148003             0.060   PREDICTED: similar to lectin, galactoside-binding, ...
LOC148003             0.059   PREDICTED: similar to lectin, galactoside-binding, ...
LOC148003             0.059   PREDICTED: similar to lectin, galactoside-binding, s...
LGALS13               0.057   galectin-13 
LOC148003             0.057   PREDICTED: similar to lectin, galactoside-binding, s...
LGALS14               0.056   lectin, galactoside-binding, soluble, 14 isoform 1 [H...
LGALS14               0.055   lectin, galactoside-binding, soluble, 14 isoform 2 [...
CLC                   0.052   Charcot-Leyden crystal protein 
LGALS1                0.049   galectin-1 
LOC400696             0.038   hypothetical protein LOC400696 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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