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Name: LGALS9 Sequence: fasta or formatted (355aa) NCBI GI: 6806890
Description:

galectin-9 isoform long

Referenced in:

Lectin Families

Other entries for this name:
alt prot [323aa] galectin-9 isoform short
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.5         16           1
 C cysteine            1.7          6           1
 D aspartate           2.8         10           1
 E glutamate           2.5          9           2
 F phenylalanine       7.6         27           1
 G glycine             7.9         28           2
 H histidine           3.7         13           1
 I isoleucine          5.1         18           1
 K lysine              2.0          7           1
 L leucine             6.5         23           2
 M methionine          2.5          9           2
 N asparagine          5.1         18           1
 P proline             9.9         35           2
 Q glutamine           6.5         23           1
 R arginine            5.6         20           2
 S serine              8.2         29           3
 T threonine           5.9         21           2
 V valine              8.5         30           2
 W tryptophan          1.1          4           1
 Y tyrosine            2.5          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   galectin-9 isoform long 
LGALS9B               0.950   galectin-9 like 
LGALS9C               0.936   galectin 9 like 
LGALS9                0.880   galectin-9 isoform short 
LGALS4                0.262   galectin-4 
LGALS8                0.224   galectin-8 isoform a 
LGALS8                0.224   galectin-8 isoform a 
LGALS8                0.203   galectin-8 isoform b 
LGALS8                0.203   galectin-8 isoform b 
LGALS3                0.130   galectin 3 
LGALS12               0.128   lectin, galactoside-binding, soluble, 12 isoform 1 ...
LGALS12               0.123   lectin, galactoside-binding, soluble, 12 isoform 2 [...
LGALS12               0.114   lectin, galactoside-binding, soluble, 12 isoform 3 ...
LGALS12               0.099   lectin, galactoside-binding, soluble, 12 isoform 4 ...
LGALS7                0.093   galectin-7 
LGALS7B               0.093   galectin-7B 
LGALS12               0.091   lectin, galactoside-binding, soluble, 12 isoform 5 ...
HSPC159               0.086   hypothetical protein LOC29094 
LGALS13               0.063   galectin-13 
LGALS14               0.060   lectin, galactoside-binding, soluble, 14 isoform 1 [H...
LOC148003             0.060   PREDICTED: similar to lectin, galactoside-binding, ...
LOC148003             0.060   PREDICTED: similar to lectin, galactoside-binding, ...
LOC148003             0.058   PREDICTED: similar to lectin, galactoside-binding, ...
LGALS14               0.058   lectin, galactoside-binding, soluble, 14 isoform 2 [...
LOC148003             0.057   PREDICTED: similar to lectin, galactoside-binding, ...
LOC148003             0.057   PREDICTED: similar to lectin, galactoside-binding, s...
LOC148003             0.056   PREDICTED: similar to lectin, galactoside-binding, s...
LGALS1                0.052   galectin-1 
CLC                   0.047   Charcot-Leyden crystal protein 
LOC400696             0.040   hypothetical protein LOC400696 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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