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Name: LGALS9C Sequence: fasta or formatted (356aa) NCBI GI: 111494239
Description:

galectin 9 like

Referenced in:

Lectin Families

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         18           1
 C cysteine            2.2          8           1
 D aspartate           2.8         10           1
 E glutamate           2.5          9           2
 F phenylalanine       7.9         28           1
 G glycine             7.6         27           2
 H histidine           3.7         13           1
 I isoleucine          5.1         18           2
 K lysine              2.5          9           1
 L leucine             5.1         18           1
 M methionine          3.1         11           2
 N asparagine          4.5         16           2
 P proline             9.8         35           2
 Q glutamine           6.7         24           1
 R arginine            5.6         20           2
 S serine              8.4         30           2
 T threonine           5.3         19           2
 V valine              8.7         31           2
 W tryptophan          0.8          3           1
 Y tyrosine            2.5          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   galectin 9 like 
LGALS9B               0.975   galectin-9 like 
LGALS9                0.933   galectin-9 isoform long 
LGALS9                0.818   galectin-9 isoform short 
LGALS4                0.263   galectin-4 
LGALS8                0.229   galectin-8 isoform a 
LGALS8                0.229   galectin-8 isoform a 
LGALS8                0.203   galectin-8 isoform b 
LGALS8                0.203   galectin-8 isoform b 
LGALS12               0.132   lectin, galactoside-binding, soluble, 12 isoform 1 ...
LGALS12               0.128   lectin, galactoside-binding, soluble, 12 isoform 2 [...
LGALS3                0.122   galectin 3 
LGALS12               0.108   lectin, galactoside-binding, soluble, 12 isoform 3 ...
LGALS12               0.104   lectin, galactoside-binding, soluble, 12 isoform 4 ...
LGALS7                0.087   galectin-7 
LGALS7B               0.087   galectin-7B 
LGALS12               0.085   lectin, galactoside-binding, soluble, 12 isoform 5 ...
HSPC159               0.085   hypothetical protein LOC29094 
LOC148003             0.058   PREDICTED: similar to lectin, galactoside-binding, ...
LOC148003             0.058   PREDICTED: similar to lectin, galactoside-binding, ...
LOC148003             0.058   PREDICTED: similar to lectin, galactoside-binding, ...
LGALS13               0.057   galectin-13 
CLC                   0.057   Charcot-Leyden crystal protein 
LOC148003             0.057   PREDICTED: similar to lectin, galactoside-binding, ...
LOC148003             0.057   PREDICTED: similar to lectin, galactoside-binding, s...
LGALS14               0.056   lectin, galactoside-binding, soluble, 14 isoform 1 [H...
LOC148003             0.056   PREDICTED: similar to lectin, galactoside-binding, s...
LGALS14               0.056   lectin, galactoside-binding, soluble, 14 isoform 2 [...
LGALS1                0.049   galectin-1 
LOC400696             0.037   hypothetical protein LOC400696 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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