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Search of human proteins with 223671915
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|223671915 GDP-fucose transporter 1 isoform a [Homo sapiens]
(364 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|223671915 GDP-fucose transporter 1 isoform a [Homo sapiens] 729 0.0
gi|223671919 GDP-fucose transporter 1 isoform b [Homo sapiens] 704 0.0
gi|223671917 GDP-fucose transporter 1 isoform b [Homo sapiens] 704 0.0
gi|223029426 solute carrier family 35, member D2 [Homo sapiens] 69 9e-12
gi|14028875 solute carrier family 35 (UDP-glucuronic acid/UDP-N-... 65 1e-10
gi|27881499 solute carrier family 35, member C2 isoform a [Homo ... 57 3e-08
gi|21314776 solute carrier family 35, member C2 isoform a [Homo ... 57 3e-08
gi|160707905 similar to solute carrier family 35, member E2 [Hom... 53 5e-07
gi|164607128 solute carrier family 35, member E1 [Homo sapiens] 52 8e-07
gi|27881496 solute carrier family 35, member C2 isoform b [Homo ... 52 1e-06
gi|56699411 solute carrier family 35, member E2 [Homo sapiens] 52 1e-06
gi|33469137 solute carrier family 35, member E2 [Homo sapiens] 40 0.003
gi|5453621 solute carrier family 35 (CMP-sialic acid transporter... 37 0.021
gi|5032213 solute carrier family 35, member B1 [Homo sapiens] 37 0.028
gi|14249528 solute carrier family 35, member B4 [Homo sapiens] 33 0.40
gi|51854213 olfactory receptor, family 8, subfamily J, member 3 ... 32 0.68
gi|52353298 olfactory receptor, family 8, subfamily J, member 1 ... 32 0.68
gi|164519076 transmembrane 9 superfamily protein member 4 [Homo ... 31 1.5
gi|16876447 acyl-malonyl condensing enzyme [Homo sapiens] 30 3.4
gi|40789261 solute carrier family 16, member 6 [Homo sapiens] 30 4.4
gi|89044650 PREDICTED: acyl-malonyl condensing enzyme 1-like 1 [... 29 5.8
gi|4507011 glucose transporter 4 [Homo sapiens] 29 7.6
gi|40806187 ADAM metallopeptidase with thrombospondin type 1 mot... 28 9.9
gi|7661708 feline leukemia virus subgroup C cellular receptor 1 ... 28 9.9
gi|148612805 pigeon homolog [Homo sapiens] 28 9.9
>gi|223671915 GDP-fucose transporter 1 isoform a [Homo sapiens]
Length = 364
Score = 729 bits (1882), Expect = 0.0
Identities = 364/364 (100%), Positives = 364/364 (100%)
Query: 1 MNRAPLKRSRILHMALTGASDPSAEAEANGEKPFLLRALQIALVVSLYWVTSISMVFLNK 60
MNRAPLKRSRILHMALTGASDPSAEAEANGEKPFLLRALQIALVVSLYWVTSISMVFLNK
Sbjct: 1 MNRAPLKRSRILHMALTGASDPSAEAEANGEKPFLLRALQIALVVSLYWVTSISMVFLNK 60
Query: 61 YLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSALAACCPGAVDFPSLRLDLRVARSVLPL 120
YLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSALAACCPGAVDFPSLRLDLRVARSVLPL
Sbjct: 61 YLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSALAACCPGAVDFPSLRLDLRVARSVLPL 120
Query: 121 SVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGG 180
SVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGG
Sbjct: 121 SVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGG 180
Query: 181 FWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNACI 240
FWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNACI
Sbjct: 181 FWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNACI 240
Query: 241 LFLPLLLLLGELQALRDFAQLGSAHFWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSG 300
LFLPLLLLLGELQALRDFAQLGSAHFWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSG
Sbjct: 241 LFLPLLLLLGELQALRDFAQLGSAHFWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSG 300
Query: 301 TAKACAQTVLAVLYYEETKSFLWWTSNMMVLGGSSAYTWVRGWEMKKTPEEPSPKDSEKS 360
TAKACAQTVLAVLYYEETKSFLWWTSNMMVLGGSSAYTWVRGWEMKKTPEEPSPKDSEKS
Sbjct: 301 TAKACAQTVLAVLYYEETKSFLWWTSNMMVLGGSSAYTWVRGWEMKKTPEEPSPKDSEKS 360
Query: 361 AMGV 364
AMGV
Sbjct: 361 AMGV 364
>gi|223671919 GDP-fucose transporter 1 isoform b [Homo sapiens]
Length = 351
Score = 704 bits (1816), Expect = 0.0
Identities = 351/351 (100%), Positives = 351/351 (100%)
Query: 14 MALTGASDPSAEAEANGEKPFLLRALQIALVVSLYWVTSISMVFLNKYLLDSPSLRLDTP 73
MALTGASDPSAEAEANGEKPFLLRALQIALVVSLYWVTSISMVFLNKYLLDSPSLRLDTP
Sbjct: 1 MALTGASDPSAEAEANGEKPFLLRALQIALVVSLYWVTSISMVFLNKYLLDSPSLRLDTP 60
Query: 74 IFVTFYQCLVTTLLCKGLSALAACCPGAVDFPSLRLDLRVARSVLPLSVVFIGMITFNNL 133
IFVTFYQCLVTTLLCKGLSALAACCPGAVDFPSLRLDLRVARSVLPLSVVFIGMITFNNL
Sbjct: 61 IFVTFYQCLVTTLLCKGLSALAACCPGAVDFPSLRLDLRVARSVLPLSVVFIGMITFNNL 120
Query: 134 CLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGGFWLGVDQEGAEGT 193
CLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGGFWLGVDQEGAEGT
Sbjct: 121 CLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGGFWLGVDQEGAEGT 180
Query: 194 LSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNACILFLPLLLLLGELQ 253
LSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNACILFLPLLLLLGELQ
Sbjct: 181 LSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNACILFLPLLLLLGELQ 240
Query: 254 ALRDFAQLGSAHFWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVL 313
ALRDFAQLGSAHFWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVL
Sbjct: 241 ALRDFAQLGSAHFWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVL 300
Query: 314 YYEETKSFLWWTSNMMVLGGSSAYTWVRGWEMKKTPEEPSPKDSEKSAMGV 364
YYEETKSFLWWTSNMMVLGGSSAYTWVRGWEMKKTPEEPSPKDSEKSAMGV
Sbjct: 301 YYEETKSFLWWTSNMMVLGGSSAYTWVRGWEMKKTPEEPSPKDSEKSAMGV 351
>gi|223671917 GDP-fucose transporter 1 isoform b [Homo sapiens]
Length = 351
Score = 704 bits (1816), Expect = 0.0
Identities = 351/351 (100%), Positives = 351/351 (100%)
Query: 14 MALTGASDPSAEAEANGEKPFLLRALQIALVVSLYWVTSISMVFLNKYLLDSPSLRLDTP 73
MALTGASDPSAEAEANGEKPFLLRALQIALVVSLYWVTSISMVFLNKYLLDSPSLRLDTP
Sbjct: 1 MALTGASDPSAEAEANGEKPFLLRALQIALVVSLYWVTSISMVFLNKYLLDSPSLRLDTP 60
Query: 74 IFVTFYQCLVTTLLCKGLSALAACCPGAVDFPSLRLDLRVARSVLPLSVVFIGMITFNNL 133
IFVTFYQCLVTTLLCKGLSALAACCPGAVDFPSLRLDLRVARSVLPLSVVFIGMITFNNL
Sbjct: 61 IFVTFYQCLVTTLLCKGLSALAACCPGAVDFPSLRLDLRVARSVLPLSVVFIGMITFNNL 120
Query: 134 CLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGGFWLGVDQEGAEGT 193
CLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGGFWLGVDQEGAEGT
Sbjct: 121 CLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGGFWLGVDQEGAEGT 180
Query: 194 LSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNACILFLPLLLLLGELQ 253
LSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNACILFLPLLLLLGELQ
Sbjct: 181 LSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNACILFLPLLLLLGELQ 240
Query: 254 ALRDFAQLGSAHFWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVL 313
ALRDFAQLGSAHFWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVL
Sbjct: 241 ALRDFAQLGSAHFWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVL 300
Query: 314 YYEETKSFLWWTSNMMVLGGSSAYTWVRGWEMKKTPEEPSPKDSEKSAMGV 364
YYEETKSFLWWTSNMMVLGGSSAYTWVRGWEMKKTPEEPSPKDSEKSAMGV
Sbjct: 301 YYEETKSFLWWTSNMMVLGGSSAYTWVRGWEMKKTPEEPSPKDSEKSAMGV 351
>gi|223029426 solute carrier family 35, member D2 [Homo sapiens]
Length = 337
Score = 68.6 bits (166), Expect = 9e-12
Identities = 73/296 (24%), Positives = 130/296 (43%), Gaps = 21/296 (7%)
Query: 24 AEAEANGEKPFLLRA-LQIALVVS--LYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQ 80
AEAE G +P R ++A ++S Y S +V +NK LL + +PIF+ Q
Sbjct: 7 AEAEGAGGEPGAARLPSRVARLLSALFYGTCSFLIVLVNKALLTTYGF--PSPIFLGIGQ 64
Query: 81 CLVTTLLCKGLSALAACCPGAVDFPSLRLDLRVARSVLPLSVVFIGMITFNNLCLKYVGV 140
+ T++ +S L + FP D ++ + PL ++++G + +
Sbjct: 65 -MAATIMILYVSKLNKI----IHFPDF--DKKIPVKLFPLPLLYVGNHISGLSSTSKLSL 117
Query: 141 AFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGGFWLGVDQEGAEGTLSWLGTV 200
+ V R T +LL ++L + S +L+ II G ++ G++ + G +
Sbjct: 118 PMFTVLRKFTIPLTLLLETIILGKQYSLNIILSVFAIILGAFIAA---GSDLAFNLEGYI 174
Query: 201 FGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNACILFLPLLLL---LGELQALRD 257
F L + + N +YT + + + + + FYN AC + +P L++ G+LQ +
Sbjct: 175 FVFLNDIFTAANGVYTKQKMDPKELGKYGVLFYN---ACFMIIPTLIISVSTGDLQQATE 231
Query: 258 FAQLGSAHFWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVL 313
F Q + F L GF + Y T L + S LT V G K + + +L
Sbjct: 232 FNQWKNVVFILQFLLSCFLGFLLMYSTVLCSYYNSALTTAVVGAIKNVSVAYIGIL 287
>gi|14028875 solute carrier family 35 (UDP-glucuronic
acid/UDP-N-acetylgalactosamine dual transporter), member
D1 [Homo sapiens]
Length = 355
Score = 64.7 bits (156), Expect = 1e-10
Identities = 69/297 (23%), Positives = 116/297 (39%), Gaps = 29/297 (9%)
Query: 43 LVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSALAACCPGAV 102
L Y V+S +V +NK +L + R + + V Q + T + AL V
Sbjct: 44 LAAGFYGVSSFLIVVVNKSVLTN--YRFPSSLCVGLGQMVATVAVLWVGKALRV-----V 96
Query: 103 DFPSLRLDLRVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLLSYLLL 162
FP L D V R PL +++ G K + + + V R + +F + +LL
Sbjct: 97 KFPDL--DRNVPRKTFPLPLLYFGNQITGLFSTKKLNLPMFTVLRRFSILFTMFAEGVLL 154
Query: 163 KQTTSFYALLTCGIIIGGFWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPA 222
K+T S+ +T +I G ++ + A G F ++ + + N Y + L +
Sbjct: 155 KKTFSWGIKMTVFAMIIGAFVAASSDLA---FDLEGYAFILINDVLTAANGAYVKQKLDS 211
Query: 223 VDGSIWRLTFYNNVNACILFLPLLLLLGELQALRDFAQLGSAHFWGMMTLGGLFGFAIGY 282
+ + L +YN + + L + G+ Q +F F TL + GF + Y
Sbjct: 212 KELGKYGLLYYNALFMILPTLAIAYFTGDAQKAVEFEGWADTLFLLQFTLSCVMGFILMY 271
Query: 283 VTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEETKSFLWWTSNMMVLGGSSAYTW 339
T L ++ S LT + G K T + MV GG +TW
Sbjct: 272 ATVLCTQYNSALTTTIVGCIKNILITYIG-----------------MVFGGDYIFTW 311
>gi|27881499 solute carrier family 35, member C2 isoform a [Homo
sapiens]
Length = 365
Score = 57.0 bits (136), Expect = 3e-08
Identities = 75/321 (23%), Positives = 122/321 (38%), Gaps = 34/321 (10%)
Query: 34 FLLRALQIALVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSA 93
FL +A+ +V LY+ SI + F NK+L S P+F+T V L A
Sbjct: 10 FLWKAVLTLGLVLLYYCFSIGITFYNKWLTKS----FHFPLFMTMLHLAVIFLFSALSRA 65
Query: 94 LAACCPGAVDFPSLRLDLRVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVF 153
L C D R V P ++ + +N YV V+ Y + +S +F
Sbjct: 66 LVQCSSHRARVVLSWADY--LRRVAPTALATALDVGLSNWSFLYVTVSLYTMTKSSAVLF 123
Query: 154 NVLLSYLLLKQTTSFYALLTCGIIIGGFWLGV---DQEGAEGTLSWLGTVFGVLASLCVS 210
++ S + + +L +I GG ++ Q EG LG F + + +
Sbjct: 124 ILIFSLIFKLEELRAALVLVVLLIAGGLFMFTYKSTQFNVEGFALVLGASF--IGGIRWT 181
Query: 211 LNAIYTTKVLPAVDGSIWRLTFYNNVNACILFLPLLLL-LGELQALRDFAQLGSAH---- 265
L + K L N ++ PL+ L L L A+ + L ++
Sbjct: 182 LTQMLLQKA---------ELGLQNPIDTMFHLQPLMFLGLFPLFAVFEGLHLSTSEKIFR 232
Query: 266 ---------FWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYE 316
G + LGG+ F +G+ L + TS LT +++G K +LA
Sbjct: 233 FQDTGLLLRVLGSLFLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLG 292
Query: 317 ETKSFLWWTSNMMVLGGSSAY 337
+ S L W + L G S +
Sbjct: 293 DQISLLNWLGFALCLSGISLH 313
>gi|21314776 solute carrier family 35, member C2 isoform a [Homo
sapiens]
Length = 365
Score = 57.0 bits (136), Expect = 3e-08
Identities = 75/321 (23%), Positives = 122/321 (38%), Gaps = 34/321 (10%)
Query: 34 FLLRALQIALVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSA 93
FL +A+ +V LY+ SI + F NK+L S P+F+T V L A
Sbjct: 10 FLWKAVLTLGLVLLYYCFSIGITFYNKWLTKS----FHFPLFMTMLHLAVIFLFSALSRA 65
Query: 94 LAACCPGAVDFPSLRLDLRVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVF 153
L C D R V P ++ + +N YV V+ Y + +S +F
Sbjct: 66 LVQCSSHRARVVLSWADY--LRRVAPTALATALDVGLSNWSFLYVTVSLYTMTKSSAVLF 123
Query: 154 NVLLSYLLLKQTTSFYALLTCGIIIGGFWLGV---DQEGAEGTLSWLGTVFGVLASLCVS 210
++ S + + +L +I GG ++ Q EG LG F + + +
Sbjct: 124 ILIFSLIFKLEELRAALVLVVLLIAGGLFMFTYKSTQFNVEGFALVLGASF--IGGIRWT 181
Query: 211 LNAIYTTKVLPAVDGSIWRLTFYNNVNACILFLPLLLL-LGELQALRDFAQLGSAH---- 265
L + K L N ++ PL+ L L L A+ + L ++
Sbjct: 182 LTQMLLQKA---------ELGLQNPIDTMFHLQPLMFLGLFPLFAVFEGLHLSTSEKIFR 232
Query: 266 ---------FWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYE 316
G + LGG+ F +G+ L + TS LT +++G K +LA
Sbjct: 233 FQDTGLLLRVLGSLFLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLG 292
Query: 317 ETKSFLWWTSNMMVLGGSSAY 337
+ S L W + L G S +
Sbjct: 293 DQISLLNWLGFALCLSGISLH 313
>gi|160707905 similar to solute carrier family 35, member E2 [Homo
sapiens]
Length = 405
Score = 52.8 bits (125), Expect = 5e-07
Identities = 72/315 (22%), Positives = 133/315 (42%), Gaps = 36/315 (11%)
Query: 43 LVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQCLVTTLL-CKGLSALAACC--- 98
L ++L++ S +FLNKY+L SL P + Q L TT++ C + L CC
Sbjct: 77 LYLTLWFFFSFCTLFLNKYIL---SLLGGEPSMLGAVQMLSTTVIGC--VKTLVPCCLYQ 131
Query: 99 -PGAVDFPSLRLDLRVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLL 157
+ +P L + ++ + V +G+++ LK V V+F +S +F V++
Sbjct: 132 HKARLSYPPNFLMTMLFVGLMRFATVVLGLVS-----LKNVAVSFAETVKSSAPIFTVIM 186
Query: 158 SYLLLKQTTSFYALLTCGIIIGGFWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTT 217
S ++L + T L+ ++GG L E + + LG + ++ L +++
Sbjct: 187 SRMILGEYTGLLVNLSLIPVMGGLALCT---ATEISFNVLGFSAALSTNIMDCLQNVFSK 243
Query: 218 KVLPAVDGSIWR-----LTFYNNVNACILFLPLLLLLGELQALRDFAQLGSAHFWG---- 268
K+L G +R L FY + A + +P + ++ + + G + +
Sbjct: 244 KLL---SGDKYRFSAPELQFYTSAAAVAMLVPARVFFTDVPVI---GRSGKSFSYNQDVV 297
Query: 269 --MMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEETKSFLWWTS 326
++T G LF L K SP+T +V+ T K L+V+ + + L
Sbjct: 298 LLLLTDGVLFHLQSVTAYALMGKI-SPVTFSVASTVKHALSIWLSVIVFGNKITSLSAVG 356
Query: 327 NMMVLGGSSAYTWVR 341
+V G Y R
Sbjct: 357 TALVTVGVLLYNKAR 371
>gi|164607128 solute carrier family 35, member E1 [Homo sapiens]
Length = 410
Score = 52.0 bits (123), Expect = 8e-07
Identities = 73/304 (24%), Positives = 122/304 (40%), Gaps = 34/304 (11%)
Query: 18 GASDPSAEAEANGEKPFLLRALQIALVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVT 77
GA P A + + G + ++A + L++ S +NK +L + P VT
Sbjct: 11 GAGGPGAASSSGGAR----EGARVAALCLLWYALSAGGNVVNKVILSA------FPFPVT 60
Query: 78 FYQCLVTTLLCKGLSALAACC----------PGAVDFPS---LRLDLRVARSVLPLSVVF 124
C + L C GL L PG PS L R VLPL+
Sbjct: 61 VSLCHILAL-CAGLPPLLRAWRVPPAPPVSGPGPSPHPSSGPLLPPRFYPRYVLPLAFGK 119
Query: 125 IGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGGFWLG 184
++ + V V++ + ++ ++ VLLS +++K+ S L+ II G L
Sbjct: 120 YFASVSAHVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKEKQSTKVYLSLIPIISGVLLA 179
Query: 185 VDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNA-CILFL 243
E + G V + A+LC SL I++ KVL D I L N + + F+
Sbjct: 180 TV---TELSFDMWGLVSALAATLCFSLQNIFSKKVLR--DSRIHHLRLLNILGCHAVFFM 234
Query: 244 PLLLLLGELQALRDFAQLGSAHFWG----MMTLGGLFGFAIGYVTGLQIKFTSPLTHNVS 299
+L +L A + L + W ++ + G FA + + SPL+++V+
Sbjct: 235 IPTWVLVDLSAFLVSSDLTYVYQWPWTLLLLAVSGFCNFAQNVIAFSILNLVSPLSYSVA 294
Query: 300 GTAK 303
K
Sbjct: 295 NATK 298
>gi|27881496 solute carrier family 35, member C2 isoform b [Homo
sapiens]
Length = 344
Score = 51.6 bits (122), Expect = 1e-06
Identities = 73/314 (23%), Positives = 121/314 (38%), Gaps = 41/314 (13%)
Query: 34 FLLRALQIALVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQCLVTTLLCKGLSA 93
FL +A+ +V LY+ SI + F NK+L S P+F+T V L A
Sbjct: 10 FLWKAVLTLGLVLLYYCFSIGITFYNKWLTKS----FHFPLFMTMLHLAVIFLFSALSRA 65
Query: 94 LAACCPGAVDFPSLRLDLRVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVF 153
L C D R V P ++ + +N YV V+ Y + +S +F
Sbjct: 66 LVQCSSHRARVVLSWAD--YLRRVAPTALATALDVGLSNWSFLYVTVSLYTMTKSSAVLF 123
Query: 154 NVLLS--YLLLKQTTSF----YALLTCGIIIGGF-WLGVD---QEGAEGTLSWLGTVFGV 203
++ S + L + +T F +AL+ IGG W Q+ G + + T+F +
Sbjct: 124 ILIFSLIFKLEELSTQFNVEGFALVLGASFIGGIRWTLTQMLLQKAELGLQNPIDTMFHL 183
Query: 204 LASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNACILFLPLLLLLGELQALRDFAQLGS 263
+ + L ++ +++ + F LLL L
Sbjct: 184 QPLMFLGLFPLF----------AVFEGLHLSTSEKIFRFQDTGLLLRVL----------- 222
Query: 264 AHFWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEETKSFLW 323
G + LGG+ F +G+ L + TS LT +++G K +LA + S L
Sbjct: 223 ----GSLFLGGILAFGLGFSEFLLVSRTSSLTLSIAGIFKEVCTLLLAAHLLGDQISLLN 278
Query: 324 WTSNMMVLGGSSAY 337
W + L G S +
Sbjct: 279 WLGFALCLSGISLH 292
>gi|56699411 solute carrier family 35, member E2 [Homo sapiens]
Length = 313
Score = 51.6 bits (122), Expect = 1e-06
Identities = 68/302 (22%), Positives = 119/302 (39%), Gaps = 42/302 (13%)
Query: 50 VTSISMVFLNKYLL---DSPSLRLDTPIFVTFYQCLVTTLLCKGLSALAACCPGAVDFPS 106
+ SI +VFLNK++ P++ L FV + L +C+ L A P
Sbjct: 23 LVSICIVFLNKWIYVYHGFPNMSLTLVHFVVTWLGLY---ICQKLDIFAP-----KSLPP 74
Query: 107 LRLDLRVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTT 166
RL L L++ F G + F NL L+ + Y + +++TT + + ++T
Sbjct: 75 SRL--------LLLALSFCGFVVFTNLSLQNNTIGTYQLAKAMTTPVIIAIQTFCYQKTF 126
Query: 167 SFYALL-----TCGIIIGGFWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAIYTTKVLP 221
S L T G+I+ ++ + ++LG VF L L SL ++
Sbjct: 127 STRIQLTLIPITLGVILNSYY--------DVKFNFLGMVFAALGVLVTSLYQVWVGAKQH 178
Query: 222 AVDGSIWRLTFYNNVNACILFLPLLLLLGELQALRDFAQLGSAHFWG-----MMTLGGLF 276
+ + +L +Y + + L + + F + G W M+ L G+
Sbjct: 179 ELQVNSMQLLYYQAPMSSAMLLVAVPFFEPV-----FGEGGIFGPWSVSALLMVLLSGVI 233
Query: 277 GFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLAVLYYEETKSFLWWTSNMMVLGGSSA 336
F + I TSP+T+N+ G K C + +++ S + L G A
Sbjct: 234 AFMVNLSIYWIIGNTSPVTYNMFGHFKFCITLFGGYVLFKDPLSINQALGILCTLFGILA 293
Query: 337 YT 338
YT
Sbjct: 294 YT 295
>gi|33469137 solute carrier family 35, member E2 [Homo sapiens]
Length = 266
Score = 40.4 bits (93), Expect = 0.003
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 15/129 (11%)
Query: 43 LVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQCLVTTLL-CKGLSALAACC--- 98
L ++L++ S +FLNKY+L SL P + Q L TT++ C + L CC
Sbjct: 77 LYLTLWFFFSFCTLFLNKYIL---SLLGGEPSMLGAVQMLSTTVIGC--VKTLVPCCLYQ 131
Query: 99 -PGAVDFPSLRLDLRVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLL 157
+ +P L + ++ + V +G+++ LK V V+F +S +F V++
Sbjct: 132 HKARLSYPPNFLMTMLFVGLMRFATVVLGLVS-----LKNVAVSFAETVKSSAPIFTVIM 186
Query: 158 SYLLLKQTT 166
S ++L + T
Sbjct: 187 SRMILGEYT 195
>gi|5453621 solute carrier family 35 (CMP-sialic acid transporter),
member A1 [Homo sapiens]
Length = 337
Score = 37.4 bits (85), Expect = 0.021
Identities = 48/211 (22%), Positives = 83/211 (39%), Gaps = 15/211 (7%)
Query: 115 RSVLPLSVVFIGMITFNN---LCLKYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYAL 171
+ +L LSV + NN L L + A Y V L L + L+L +T S
Sbjct: 86 KELLKLSVPSLVYAVQNNMAFLALSNLDAAVYQVTYQLKIPCTALCTVLMLNRTLSKLQW 145
Query: 172 LTCGIIIGGFWLGVDQEGAEGTL------SWLGTVFGVLASLCVSLNAIYTTKVLPAVDG 225
++ ++ G L V + A+ T LG +A LC +Y KVL + D
Sbjct: 146 VSVFMLCAGVTL-VQWKPAQATKVVVEQNPLLGFGAIAIAVLCSGFAGVYFEKVLKSSDT 204
Query: 226 SIWRLTFYNNVNACILFLPLLLLLGELQALRDFAQLGSAHF-WGMMTLGGLFGFAIGYVT 284
S+W ++ I+ L + L + G ++ W ++ L + G T
Sbjct: 205 SLWVRNIQMYLSGIIVTLAGVYLSDGAEIKEKGFFYGYTYYVWFVIFLASVGGL----YT 260
Query: 285 GLQIKFTSPLTHNVSGTAKACAQTVLAVLYY 315
+ +K+T + S A T+ +V+ +
Sbjct: 261 SVVVKYTDNIMKGFSAAAAIVLSTIASVMLF 291
>gi|5032213 solute carrier family 35, member B1 [Homo sapiens]
Length = 322
Score = 37.0 bits (84), Expect = 0.028
Identities = 48/262 (18%), Positives = 100/262 (38%), Gaps = 14/262 (5%)
Query: 76 VTFYQCLVTTLLCKGLSALAACCPGAVDFPSLRLDLRVARSVLPLSVVFIGMITFNNLCL 135
+ F QC++ + K L F + R+D + S+ ++G + +N L
Sbjct: 55 LVFIQCVINAVFAKILIQF---------FDTARVDRTRSWLYAACSISYLGAMVSSNSAL 105
Query: 136 KYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGGFWLGVDQE----GAE 191
++V +G+S + +LL LLK+ L +I+ G L + + G E
Sbjct: 106 QFVNYPTQVLGKSCKPIPVMLLGVTLLKKKYPLAKYLCVLLIVAGVALFMYKPKKVVGIE 165
Query: 192 GTLSWLGTVFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNACILFLPLLLLLGE 251
G + +L+ L + + + N+ + +L +L GE
Sbjct: 166 EHTVGYGELLLLLSLTLDGLTGVSQDHMRAHYQTGSNHMMLNINLWSTLLLGMGILFTGE 225
Query: 252 LQALRDFAQLGSAHFWGMMTLGGLFGFAIGYVTGLQIKFTSPLTHNVSGTAKACAQTVLA 311
L FA+ A + ++ G ++ + + + PLT ++ T + + +
Sbjct: 226 LWEFLSFAERYPAIIYNILLFGLTSALGQSFIF-MTVVYFGPLTCSIITTTRKFFTILAS 284
Query: 312 VLYYEETKSFLWWTSNMMVLGG 333
V+ + S + W ++V G
Sbjct: 285 VILFANPISPMQWVGTVLVFLG 306
>gi|14249528 solute carrier family 35, member B4 [Homo sapiens]
Length = 331
Score = 33.1 bits (74), Expect = 0.40
Identities = 53/262 (20%), Positives = 104/262 (39%), Gaps = 26/262 (9%)
Query: 123 VFIGMITFNNLCLKY-VGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFY-----ALLTCGI 176
+F + NN L + + + + RS + + N++L ++LK+ S + AL++ GI
Sbjct: 72 MFFTVSVVNNYALNLNIAMPLHMIFRSGSLIANMILGIIILKKRYSIFKYTSIALVSVGI 131
Query: 177 IIGGFWLGV---------DQEGAEGTLSWLGTVFGVLASLCVSLN-AIYTTKVLPAVDGS 226
I F + +G + + WL + + +L +S I+ +
Sbjct: 132 FICTFMSAKQVTSQSSLSENDGFQAFVWWLLGIGALTFALLMSARMGIFQETLYKRFGKH 191
Query: 227 IWRLTFYNNVNACILFLPLLLLLGELQALRDFAQLGSAHFWGMMTLGGLFGFAIGYVT-- 284
FYN+ F+ L + + L + ++L G+ F + +T
Sbjct: 192 SKEALFYNHALPLPGFVFLASDIYDHAVLFNKSELYEIPVIGVTLPIMWFYLLMNIITQY 251
Query: 285 ----GLQIKFT--SPLTHNVSGTAKACAQTVLAVLYYEETKSFLWWTSNMMVLGGSSAYT 338
G+ I T + LT + T + + ++LY++ + W + V G+ YT
Sbjct: 252 VCIRGVFILTTECASLTVTLVVTLRKFVSLIFSILYFQNPFTLWHWLGTLFVFIGTLMYT 311
Query: 339 WVRGWEMKKTPEEPSPKDSEKS 360
V W T + KDS+K+
Sbjct: 312 EV--WNNLGTTKSEPQKDSKKN 331
>gi|51854213 olfactory receptor, family 8, subfamily J, member 3
[Homo sapiens]
Length = 315
Score = 32.3 bits (72), Expect = 0.68
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 140 VAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGGF 181
+A N+G S +L+++L+ K+TTSFY C +GGF
Sbjct: 66 LAIINLGNSTVIAPKMLMNFLVKKKTTSFY---ECATQLGGF 104
>gi|52353298 olfactory receptor, family 8, subfamily J, member 1
[Homo sapiens]
Length = 316
Score = 32.3 bits (72), Expect = 0.68
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 140 VAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIGGF 181
+A N+G S +L+++L+ K+TTSFY C +GGF
Sbjct: 66 LALINLGNSTVIAPKMLINFLVKKKTTSFY---ECATQLGGF 104
>gi|164519076 transmembrane 9 superfamily protein member 4 [Homo
sapiens]
Length = 642
Score = 31.2 bits (69), Expect = 1.5
Identities = 12/38 (31%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 304 ACAQTVLAVLYYEE-TKSFLWWTSNMMVLGGSSAYTWV 340
+C+Q + ++Y++ + + WW N +V GGS+ Y V
Sbjct: 547 SCSQISIVMVYFQLCAEDYRWWWRNFLVSGGSAFYVLV 584
>gi|16876447 acyl-malonyl condensing enzyme [Homo sapiens]
Length = 338
Score = 30.0 bits (66), Expect = 3.4
Identities = 24/104 (23%), Positives = 39/104 (37%), Gaps = 2/104 (1%)
Query: 78 FYQCLVTTLLCKGLSALAACCPG--AVDFPSLRLDLRVARSVLPLSVVFIGMITFNNLCL 135
F CL T GL L C PG + P L DL V ++ + T +
Sbjct: 215 FPSCLPTVAFLSGLVGLLGCVPGLFVLQTPVLPSDLLSWSCVGAEGILALVSFTCVGYAV 274
Query: 136 KYVGVAFYNVGRSLTTVFNVLLSYLLLKQTTSFYALLTCGIIIG 179
A V ++L Y +L +T + ++ G+++G
Sbjct: 275 TKAHPALVCAVLHSEVVVALILQYYMLHETVALSDIMGAGVVLG 318
>gi|40789261 solute carrier family 16, member 6 [Homo sapiens]
Length = 523
Score = 29.6 bits (65), Expect = 4.4
Identities = 32/115 (27%), Positives = 47/115 (40%), Gaps = 27/115 (23%)
Query: 176 IIIGGFWLGVDQEGAEGTLSWLGT--VFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFY 233
II G LG+DQ+ A LS + VFG + + V LN K+ +
Sbjct: 315 IIPLGISLGIDQDRAAFLLSTMAIAEVFGRIGAGFV-LNREPIRKIYIEL---------- 363
Query: 234 NNVNACILFLPLLLLLGELQALRDFAQLGSAHFWGMMTLGGLFGFAIGYVTGLQI 288
C++ L + L FA + FWG+M+ FGF +G + G I
Sbjct: 364 ----ICVILLTVSL----------FAFTFATEFWGLMSCSIFFGFMVGTIGGTHI 404
>gi|89044650 PREDICTED: acyl-malonyl condensing enzyme 1-like 1
[Homo sapiens]
Length = 338
Score = 29.3 bits (64), Expect = 5.8
Identities = 30/105 (28%), Positives = 43/105 (40%), Gaps = 16/105 (15%)
Query: 124 FIGMITFNNLCLKYVGVAFYNVGRSLT------TVFNVLLSYLLLKQTTSFY-------A 170
F ++ N+ Y V G + T TV + +L+ L Q S Y +
Sbjct: 106 FCALLNVLNIGCAYSAVQVVPTGNAATVRKHSSTVCSAILTLCLESQVLSGYDWCGLLGS 165
Query: 171 LLTCGIIIG-GFWLGVDQEGAEGTLSWLGTVFGVLASLCVSLNAI 214
+L II+G G W QEG G + LG V L L +SL +
Sbjct: 166 ILGLIIIVGPGLW--TLQEGTTGVYTGLGYVQAFLGGLALSLGLL 208
>gi|4507011 glucose transporter 4 [Homo sapiens]
Length = 509
Score = 28.9 bits (63), Expect = 7.6
Identities = 31/107 (28%), Positives = 46/107 (42%), Gaps = 12/107 (11%)
Query: 145 VGRSLTTVFNVLLSYLLL---KQTTSFYALLTCGII--IGGFWLGVDQEGAEGTLSWLGT 199
+G SL + N SY +L + Y+ LT G++ G GA GTL+ L
Sbjct: 121 LGGSLMGLANAAASYEMLILGRFLIGAYSGLTSGLVPMYVGEIAPTHLRGALGTLNQLAI 180
Query: 200 VFGVLASLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNACILFLPLL 246
V G+L + + L ++ T S+W L V +L L LL
Sbjct: 181 VIGILIAQVLGLESLLGT-------ASLWPLLLGLTVLPALLQLVLL 220
>gi|40806187 ADAM metallopeptidase with thrombospondin type 1 motif,
18 preproprotein [Homo sapiens]
Length = 1221
Score = 28.5 bits (62), Expect = 9.9
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 187 QEGAEGTLSWLGTVFGVLASL-CVSLNAIYTTKVLPAVDGSIWRLTFYNNVNACILF 242
Q GA+ L LG V + SL C + TK +PA +G++ L+ + C+ F
Sbjct: 524 QFGAKAKLCSLGFVKDICKSLWCHRVGHRCETKFMPAAEGTVCGLSMWCRQGQCVKF 580
>gi|7661708 feline leukemia virus subgroup C cellular receptor 1
[Homo sapiens]
Length = 555
Score = 28.5 bits (62), Expect = 9.9
Identities = 35/145 (24%), Positives = 55/145 (37%), Gaps = 21/145 (14%)
Query: 39 LQIALVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQCLVTTLLCKG-------L 91
L I + +Y + + ++F +LLD+ LRL T + + CL + C +
Sbjct: 144 LHIDWLSMVYMLAYVPLIFPATWLLDTRGLRL-TALLGSGLNCLGAWIKCGSVQQHLFWV 202
Query: 92 SALAACCPGAVDFPSLRLDLRVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTT 151
+ L C L L R+A V+ G + C V +G L T
Sbjct: 203 TMLGQCLCSVAQVFILGLPSRIAS-------VWFGPKEVSTACATAV------LGNQLGT 249
Query: 152 VFNVLLSYLLLKQTTSFYALLTCGI 176
LL +L+ T + LL C I
Sbjct: 250 AVGFLLPPVLVPNTQNDTNLLACNI 274
>gi|148612805 pigeon homolog [Homo sapiens]
Length = 854
Score = 28.5 bits (62), Expect = 9.9
Identities = 17/53 (32%), Positives = 27/53 (50%)
Query: 206 SLCVSLNAIYTTKVLPAVDGSIWRLTFYNNVNACILFLPLLLLLGELQALRDF 258
+L V ++ + KVL AVD IW Y ++ + L LLL+ E + + F
Sbjct: 128 TLLVEIHPVNNVKVLKAVDSYIWVQFLYPHIESHPLPENHLLLISEEKYIEQF 180
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.325 0.138 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,628,692
Number of Sequences: 37866
Number of extensions: 501933
Number of successful extensions: 1460
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1429
Number of HSP's gapped (non-prelim): 30
length of query: 364
length of database: 18,247,518
effective HSP length: 104
effective length of query: 260
effective length of database: 14,309,454
effective search space: 3720458040
effective search space used: 3720458040
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.